##maf version=1 scoring=roast.v3.3 a score=8484970.000000 s hg38.chr21_KI270874v1_alt 0 9765 + 166743 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s panTro5.chr21 3616363 9758 + 33445071 gaattcaaaatagctgttt----tttgtttgtttttt-ggcttttttttttttttttttttt---------ggaaacagagttttgctcttgttgcccaggctggagtgcaatggggcgatctcagctcaccgcaatctccacctcccgggttcatgtgattctcctgcctcagcctcctgagtacatgggattacaggcatgtgccatcacgcctggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctagtctcgaactcccgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggaatacaggtgtgagccactgcacccagctgataatagctgctttgaggaaactcaatgatatctaaaataacacaga-aaataattcagaatcctatcagataaatttaacaatgaaatggaaataactaataagaaccaagcaaagtttctgaagctgaaaaatgtaattgacatactgaagaatgcatcaaagtctctcaagaacagaattgatcaagcagaataa----ttagtggtcttgaagatgggctatttggaaatgcacagtcagagaagac-aaaaaacaaagaagaatgaaacacaactacatgatctagaaaacagcctcaaaaggacaaatgtaaaagttattggtcttaaagaggagatagagagagagagatcagggtacaaagtttattcaaagggataataacagaaaacatctcaaacctagaaaaagatatcaatattaaagtacaagaaagttatagaacacaaagcagattttaccaaaa---gactacatcaagacatgtgataattaaactcccagaggtcaagaataaagaaaagatcctaaaagtagcaagataaaagaaac----aacatacaaaggagatccaataaatctaccagcaggcttttcagtggaaactttacatgctgggagagagtggtatgactctccccactatggtatagtttaagagctgaaggaatttaaaaaacctatcctagaatagtacaaccagcaaaaatattcttcaaacatgaaggagaaataaaaactctcccagac---aaaaacctgaaggatttaatcaatgccagacctgttctataagcaatgttaaagggaattcttcatccagaaaaaaaaggatattaatgagcaataagaaatcatctgaaggttcaaaactcactggtaatagaaagtacacaaaaaacacagaataacataacactgtaattctggtgtgtaaactactcatatgttgagtagaaagactaaaatatgaaccaatcaaaaataataactacaacaatgtttcaaggcataggcagtacaataagatataaatagaaacaataaaaagtttaaaaacccaggagataaagctgaagtgtggagtttttatttttgttagtttttttctttgtttgtttgttcctgtaatcagtgtca-----tcattagtttaaaataatgagtgataagatattattcacaagtctcagggtaatctcaaattaaaaaacatacaacagatacacaaaatataaaaagcaagacattaaaaccaccagcaaaaatcgccttcactaacaggaagacagaaaataaggaaagaagaaagaaaagatcacaaagcaagcagaaaacaaataacaaaatggcagaggtaaattcttacttataaataataacattgaatgtaaatggactaaactctccaatcaaaagatttagagtggctgaatgaattttttttaaaaa-tgcctgatgatatgttggcaacaagaaacaaacttcacctataaagacacacgtagactgaaaataaacagaaaaagatatcacatgcaaatggaaaccaaaaaagagcaggggtcatcatacttacatgggacacaatatatttcaagacaaaaaccataaaaagagacaaagaaggtcattatataatgataagtggccaattcaacaagaatatatacaattgtaaatataatatgcacacaatacggaagcacctagatatataaacctaattggattagagctaaagagagagagagacccaaatacaataatagctagaagtttcaacaccacactttcaacaatggacagattatccaggcagaaaatcaacaaagaaatatcggacctaatctgcactgtaaaccaaatggacctca-------------------tagatatgcacagaacatttcaaccaatggcagcagaatacacattcttctcctcagcacattgatcattcttgaggctagaccataggttatgccacaaaacaagtcttaaaaatttcaaaaaatttgaagttatatcaagtatcttctttgcccacaaaagagtcaatctagaagtcaataacaagggggattttggagactataccaaaatatagaaattacacaatatgttcctgaatgaccagtgggttaaggaataaataaacagaaaattttacaacatttttaagcaaataacaatggaaacacaacatatcaaaatgtgtggcatacagcaacgaaagtacaaagagta-atttttttttattatactttaagttttagggtacaaagagtaaattttaagcctataagcgcctacatcaaaaaagtataaaaacttcaaattaactatctaatggtgcatcttaaagaactagaaaagcaagagcaaattaaaccccaaatttgtagaagaaagcaaataataaagatcaatcagaaataaatgtaattgaaatgaaaaaacaacacaaaagatcaatgaaataaaatatggattttttgaaaagaa----aaaactgacaagcctttagcagacaaattaagaacaaagagagatgacccaaataaataaagtcagagcaaaacacagagaatctagaatagatggagaaattcttagacatagatgtctgcctaccaagagtaaaccatgaagaaatttgaagcataaatagaggctgggcacggtggctcatgcctgt----------cttttgcgagaccaaggtaggtggatcacttgagggccagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaactcacacaaaaaattagacaagcatggtgacatgcaattgtaatcccagctactcaagaggtggaggcaagagaatctctttcatgtaggaggcagagactgtagtgagctgaatttgcaccactgcactccagcctgggcaacagagtaaaactccatctcaaaaaacaaaacaaaacaaaaaaa-cacataaatagaccaataacaaataacagatttaaaccataaaagactgtatcacagcaaagaaaagcctgggacctgatgaattctttgctgaattttagtttgaagttgggtagagtgatgcctccagctttgttcttttagcttaggatgctatattagtctgttttcatgctgctgataaagccatacctgagactgggcaatcttcaaaagaaagcaatttaatggacttacaattccatgtagctggggaggcctcacaatcatggtggagggtgaaaggcatgtctcacatggcggcagacaagagaagaaggttgtgcagggaaacacccccttatataattgtcagatctcatgagacttattcactgtcatgagaacagcacaggaaagacctgcccctgtgattcaattacctcccaccaggtccctcccacaatacgtgggaattcaaggtgagatttgggtggggacacagccaaaccatatcagatgcattggctattcaggctctcttttggttccatatgaattttaaaatag-tttttttctagttctgtgaagactgtcaatggtagtttaatggaagtaccattgaatgtataaattgctttggatagtatggtcattttaatactattgattcttcctatgcatgagcatggaatgtttttccatttgtttgtatcgtctctgatttcttcaagcagtggtttgtagttcacctctcttgttcactgtattcctaagtattttattatttttgtggcaattgtgaatgcgagtttgttcgtgatttggctcttggcttaactgttgttggtgtataggaatgttagtgattttgcacattgattttgtatcttgagattttgctgaagttgtttatcaccttaagaggcttttgggccaagactacagggttttctagatataggattatgtcatctgcaaacagaaataatttgactgcctctcttcctgtttgactgccttttatttctttctctcgctgattgcctggccagaagttccaatactatgttgaataggagtggtaaaagagggcatccttgtcttgtgctggctttcaaggggagttcttccagcctttgcccagtcagtatggtgctggttgtgggtttgtcacagatgactctcattattttgaggtatgatccatcactacctagtttattgagagtttttaaaatgaaggaatgttaaattttatcaaaacacttttctgcatctattgagataatcatgtggtttttgtcttagttttttgcc---------------cttgtttatgtgatgaatcacatttattgatttgcatatgatgaaccaacctagcatctaggggatgaatcctacttactcatagtgaatacactttttgatgctgaatttggtttgccagtatttttttggattttttgaattgatgttcatcaaggatattggcctgaagttttcttattttgttgtatctctgccaggttggtaccaggatgatgctgatctcatagaatgagttatggatgagtcctcttcttcacttctttggaatagtttcagtagagatggtatcagctcttctttgcacttctggtaaatttcagctgtgaatctgtcttaccctgagctttttaaggttagtaggctatttattactacctcaatttgaaaacacacttttggtctgttcaggaattccatttcttcctggttcagtattgggaaggtgtatgtgcccgtgaatttattcatttcttctagattttctagtttgtgtgtatagaggtatttataatattctccgatggttgtttgtatttctgtggggtcagtagcaatatctcccttatcatttctgattgt-tttatttgaatcttcccctcttctgtattagtctagctggtggtctaactctttcatttatttattaaaaaaaaaagaaaacacctcctgaatttgttggggttttgaatggtctttcatgtctctatctcctccagttcagctctgattttagttacttcttgtcttctgctaagtttgaaatttgtttactctttgttctctagttcttttagatatgatgttgggttgttaacttaagatctttctaattttttgatgtgggcagttaatgctataaattttcatcttaacactgccttagctgtgtcccagagattctggtaggttgtatctttttttctcattagtttcaaataacttcttg-tttctgccttaatttcattattttcccaaacgttattcaggagcagattattcaatttccatgtaatcatacggttttgagttaatgtcttagtcttaagttctaatttaattgtgctgtggtctgaaagactgtctgttgtgatttcagctcttttgcatttgctgagtaatggtgtaattctcattatgcgattaattttagagtaagtaatatgtggcaatgagaaaaatgtattttcagttgttctggggtggagagtttggtagatatttatcaggtttattttaatccaaagctgagttcaggtcctgaatatctttcttacatttctgtctcaatgatctaatattgacagtggggtgttaaattcacccacttttat--tgtgtgagtctaagtctctctgaagatctccaagaaattgatttaccaatatgggtgctcctatgttgggtgcatatatatttaagatagttagctcttcttaggttggtaataacaagcttctccaagctaaaggaggatatttgaaaccattgcaaggaagctaaaaacttgaaaaaagattagacaaatggctaactagaataaacagtgtagagaagaacttaaatgacctgatggagctgaaaaccatggcacaacaacttcgtgacgcatgcacaagcatcactagccaatgggatcaagaggaagaaagggtatcagtgactgaagatcaaattaatgaaataaagt-----gagaagtttagagaaaaaagagtaaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatttgatgggtgtacctgaaagtaacagggagaatggaaccaagttggaaaacactcttgaggatattacccaggagaacttccccaacctagcaaggcaggccaacattcaaattcaggaaatacagacaacaccacaaagatactcctcgagaagaacaaccacaagacacataattggcagatgcaccaaggttaaatgaagg-aaaaaatgttaagggcagccacagagaaagggcgggttacccacaaaggaaagcccatcagactaacagcagatctctcagcacaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagatttttcaacccagaatttcatatccagccaaactaagcttcattagtgaaggagaaataaaattctttacagataagcaaatgctgagagattttgtcaccgccaggcctgccttacaagagctcctgaaggaagcactaaacatggaaaggaaaaaccggtaccagccactgcaaaaacatgccaaactgtaaataccaccaatgctaggaagaaactgcatcaactaacaggcaaaataaccagctaacatcatagtgacaagatcaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgccacagttaaaagacacagactggcaaattggataaagagtcaa-gacccatcagtgtgctgtattcaggagacacatctcacatgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagaaaatggaaagc-aaaaaaaagcaggggttacaatcctagccgctgataaaataggctttaaaccaataaagatcaaaagagacaaagaaggccattgcataatggtaaagggatcaattcaataagaagagctaactatcctaaatattatatgcacccaatacaggaacacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggagactttaacaccccactgtcaatattagacagat-aacaagacagaaggttaacaaggatatccaggacttgaactcagctctgcaccaagcagacctaatagacatctactgaaatctccacccaaaatcaatggaatattcattattctcagcaccacatcacacttactttaaaattgaagcaaagcac-tcgttggaagcaaagcactcctcagcaaatgtaaaagaaaagaaatcacaaagaactgtctctcagacaatagtgcaatcaaattagaactcaggattaagaaactcattcaaaaccacacaagtacatagaaactgaacaacctgctcctgaatgactactgggtaataacaaaaagaaggcagaaataaaaatgtcctttgaaaccaatgagaacaaagacacaacgtaccagaatctctgggacacatttaaagcagcatgtagagggaaatttgtagcactaaatgcccacaagagaaagcaggaaagatctaaaatcggcaccctaacatcacaattaaaagaactggagaagcaagagcaaacacattcaaaagctagcagaaagcaagaaataactaagatcagagcagaactggaggaaatagagacacaaaaa-cccttcaaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagacctctagcaagactaataaagaaaaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccactgattccacagaaatacaaactaccatcagagaatactataaacacctctacacaaataaactagaaaatctagaagaaatggataaattcctagacacatacaccctcccaagaataaactaggaagaagttgaatctctgaatagaccaataacaggccctgaaattcagacaataattaatagcctatcaatcaa----aaaaagcccaggaccagatggattcacagccaaatactaccaggggtacaaagaggagctgttaccattccttctgaaactattccaatcaacagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagagaatttcagaccagtatccctgatgaagattgatgcaaaaatcctcaataaaatactggcaaaccgaatctagcagcacatcaaaaagcttatccaccacgatcacgttggcttcatccctgtgatgcaaggctggtttaacatacacaaatcaataaatgtaatctgtcataaaaaccgaa-caaaaacaaaaaccacatgattatctcaatagatggtgaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataaactaggtattgatgggatgtatttcaaaataataagagctatttatgacaaacccacagccaacagcatactaaatgggcaaaaactggaagcattctctttgaaaactggcacaagacagggatgccctctctcaccactcctgttcaacatagtattggaagttctggccagggcaatcaggcaggagaaagaaataaagggtattcagttaggaaaagaggaagtcaagttgtccctgtttgcagataacatgactgtatatttagaaaaccccattgtctcagcccaaatctccttaagctgataagcaactttagcaaagtctcaggatacaaaatcaatgtgcaaaaatcactagcattcctatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaaaggatgtgaaagacctcttcaaggagaactacaaaccacagcttaacaaaataaaagaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatgtctttcttcaaagaattggaaaaaaaaactactttaaagttcatatggaacc--aaaaaagagcctgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagtgtggtactggtaccaaaacagagatatagaccaacagaacagaacagagccctcagaaataatactacatgtctacaatcatctgatctttgacaaacctgacaaaaac--aagcaatggggaaatgattccctattt i panTro5.chr21 N 0 C 0 s panPan2.chr21 17251663 9746 + 46275980 gaattcaaaatagcttttt----tttgtttgtttttt-ggtctttttttttttttttttt-----------ggaaacagagttttgctcttgttgcccaggctggagtgcaatggggcgatctcagctcaccacaatctccacgtcccgggttcatgtgattctcctgcctcagcctcctgagtacatgggattacaggcatgtgccatcacgcctggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctagtctcgaactcccgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggaatacaggtgtgagccactgcacccagctgataatagctgctttgaggaaactcaatgatatctaaaataacacaga-aaataattcagaatcctatcagataaatttaacaatgaaatggaaataactaataagaaccaagcaaagattctgaagctgaaaaatgtaattgacatactgaagaatgcatcaaagtctctcaagaacagaattgatcaagcagaataaagaattagtggtcttaaagatgggctatttggaaatgcacagtcagagaagac-aaaaaacaaagaagaatgaaacacaactacatgatctagaaaacagcctcaaa---gcaaatgtaaaagttattggtcttaaagaggagat--agagagagagatcagggtacaaagtttattcaaagggataataacagaaaacatctcaaacctagaaaaagatatcaatattaaagtacaagaaagttatagaacacaaagcagattttaccaaaa---gactacatcaagacatgtgataattaaactcccagaggtcaagaataaagaaaagatcctaaaagtagcaagataaaagaaac----aacatacaaaggagatccaataaatctatcagcaggcttttcagtggaaactttacatgctgggagagagtggtatgactctccccactatggtatagttaaagagctgaaggaatttaaaaaacctatcctagaatagtacaaccagcaaaaatattcttcaaacatgaaggagaaataaaaactctcccagac---aaaaacctgaaggatttaatcaatgacagacctgttctataagcaatgttaaagggaattcttcatccagaaaaaaaaggatattaatgagcaataagaaatcatctgaaggttcaaaactcactggtaatagaaagtacacaaaaaacacagaataacataacactgtaattctggtgtgtaaactactcatatgttgagtagaaagactaaaatatgaaccaatcaaaactaataactacaacaatgtttcaaggcataggcagtacaataagatataaatagaaacaataaaaagtttaaaaacccaggagataaagctgaagtgtggagtttttatttttgttag-ttttttctttgtttgtttgttcctgtaatcagtgtca-----tcattagtttaaaataatgagtgataagatattattcacaagtctcagggtaatctcaaattaaaaaacatacaacagatacacaaaatataaaaagcaagacattaaaaccaccagcaaaaatcgccttcactaacaggaagacagaaaataaggaaagaagaaagaaaagatcacaaagcaagcagaaaacaaataacaaaatggcagaggtaaattcttacttataaataataacattgaatgtaaatggactaaactctccaatcaaaagacttagagtggctgaatgaattttttttaaaaa-tgcctgatgatatgttggcaacaagaaacaaacttcacctataaagacacacgtagactgaaaataaacagaaaaagatatcacatgcaaatggaaaccaaaaaagagcaggggtcatcatacttacatgggacacaatatatttcaagacaaaaaccataaaaagagacaaagaaggtcattatataatgataagtggccaattcaacaagaatatatacaattgtaaatataatatgcacacaatacagaagcacctagatatataaacctaattggattagagctaaagagagagagagacccaaatacaataatagctagacgtttcaacaccacactttcaacaatggacagattatccaggcagaaaatcaacaaagaaatattggacctaatctgcactgtaaaccaaatggacctca-------------------tagatatgcacagaacatttcaaccaatggcagcagaatacacattcttctcctcagcacattgatcattcttgaggctagaccataggttatgccacaaaacaagtcttaaaaatttcaaaaaatttgaagttatatcaagtatcttctttgcccacaaaagagtcaatctagaagtcaataacaagggggattttggagactataccaaaatatagaaattacacaatatgttcctgaatgaccagtgggttaaggaataaataaacagaaaattttacaacatttttaagcaaataacaatggaaacacaacatatcaaaatgtgtggcatacagcaacgaaagtacaaagagta-a-ttttttttattatactttaagttttagggtacaaagagtaaattttaagcctataagcgcctacatcaaaaaagtataaaaacttcaaattaacaatctaatggtgcatcttaaagaactagaaaagcaagagcaaattaaaccccaaatttgtagaagaaagcaaataataaagatcaatcagaaataaatgtaattgaaatgaaaaaacaacacaaaagatcaatgaaataaaatatggattttttgaaaagaa----aaaactgacaagcctttagcagacaaattaagaacaaagagagatgacccaaataaataaagtcagagcaaaacacagagaatctagaatagatggagaaattcttagacatagatgtctgcctaccaagagtaaaccatgaagaaatttgaagcataaatagaggctggccacggtggctcatgcctgt----------cttttgcaagaccaaggtaggtggatcacttgagggccagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaactcacacaaaaaattagacaagcatggtgacatgcaattgtaatcccagctactcaagaggcggaggcaggagaatctctttcatgtaggaggcagagactgtagtgagctgaatttgcaccactgcactccagcctgggcaacagagtaaaactccatctcaaaaaacaaaacaaaacaaaaaa--cacataaatagaccaataacaaataacagatttaaaccataaaagactgtatcacagcaaagaaaagcctgggacctgatgaattctttgctgaattttagtttgaagttgggtagagtgatgcctccagctttgttcttttagcttaggatgctatattagtctgttttcatgctgctgataaagccatacctgagactgggcaatcttcaaaagaaagcaatttaatggacttacaattccatgtagctggggaggcctcacaatcatggtggagggtgaaaggcatgtctcacatggcggcagacaagagaagaaggttgtgcagggaaacacccccttatataattgtcagatctcatgagacttattcactgtcatgagaacagcacaggaaagacctgcccctgtgattcaattacctcccaccaggtccctcccacaatacgtgggaattcaaggtgagatttgggtggggacacagccaaaccatatcagatgcattggctattcaggctctcttttggttccatatgaattttaaaatag-tttttttctagttctgtgaagactgtcaatggtagtttaatggaagtaccattgaatgtataaattgctttggatagtatggtcattttaatactattgattcttcctatgcatgagcatggaatgtttttcca----tttgtatcgtctctgatttcttcaagcagtggtttgtagttcacctctcttgttcactgtattcctaagtattttattatttttgtggcaattgtgaatgcgagtttgttcgtgatttggctcttggcttaactgttgttggtgtataggaatgttagtgattgtgcacattgattttgtatcttgagattttgctgaagttgtttatcaccttaagaggcttttgggccaagactacagggttttctagatataggattatgtcatctgcaaacagaaataatttgactgcctctcttcctgtttgactgccttttatttctttctctcgctgattgcctggccagaagttccaatactatgttgaataggagtggtaaaagagggcatccttgtcttgtgctggctttcaaggggagttcttccagcatttgcccagtcagtatggtgctggttgtgggtttgtcacagatgactctcattattttgaggtatgatccatcactacctagtttattgagagtttttaaaatgaaggaatgttaaattttatcaaaacacttttctgcatctattgagataatcatgtggtttttgtcttagttttttgcc---------------cttgtttatgtgatgaatcacatttattgatttgcatatgatgaaccaacctagcatctaggggatgaatcctacttactcatagtgaatacactttttgatgctgaatttggtttgccagtatttttctggatcttttgaattgatgttcatcaaggatattggcctgaagttttcttattttgttgtatctctgccaggttggtaccaggatgatgctgatctcatagaatgagttatggatgagtcctcttcttcacttctttggaatagtttcagtagagatggtatcagctcttctttgcacttctggtaaatttcagctgtga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i panPan2.chr21 N 0 C 0 s gorGor5.CYUI01015003v1 3190344 9747 - 13858734 gaattcaaaatagctgttt----tttgtttgtttttt-ggctttttttttttttttttttttt--------ggaaacagagttttgctcttgttgcccaggctggagtgcaatggtgtgatctcagctca-agcaacctccacctcccgggttcatgcgattctcctgcctcagcctcctgtgtacgtgggattacaggcatgtgccatcacgcctggctaattttgtatttttagtagagatggggtttctccatgttagtcaggctagtctcgaactcccgacctcaagtgatctgcctgcctcggcctcccaaagtgctgggaatacaggtgtgagccactgcacccagctgataatagctgctttgaggaaactcaatgatatctaaaataacacagagaaataattcagaatcctatcagataaatttaacaatgaaatggaaataactaataagaaccaagcaaagattctgaagctgaaaaatgtaattgacatactgaagaatgcatcaaagtctctcaagaacagaattgatcaagcagaataaagaattagtggtcttgaagatgggctatttggaaatgcacagtcagagaagac-aaaaaacaaagaagaatgaaacacaactacaagatctagaaaacagcctcaaaagggcaaatgtaaaagttattggtcttaaagaggagatagagagagagagatcagggtagaaagtttattcaaagggataataacagaaaacatctcaaacctagaaaaagatatcaatattaaagtacaagaaagttatagaacacaaagcagattttaccaaaagaagactacatcaagacatgtgataattaaactcccagaggtcaagaataaagaaaagatcctaaaagtagcaagataaaagaaac----aacatacaaaggagatccaataaatctaccagcaggcttttcagtgggaacttcacatgctgggagagagtggtatgac---------------atagttaaagagctgaaggaatt-aaaaaacctatcctagaatagtacaaccagcaaaaatattc-tcaaacatgaaggagaaataaaaactctcccagac---aaaaacctgaaggatttaatcaatgccagacctgttctataagcaatgttaaagggaattcttcagtcagaaaaaaaaggatattaatgagcaataagaaatcatctgaaggttcaaaactcacaagtaatagaaagtacacaaaaaacacagaataacataacactgtaattgtggtgtataaactactcatatgttgagtagaaagactaaaatatgaaccaatcaaaaataataactacaacaatgtttcaaggcataggcagtacaataagatataaatagaaacaataaaaagtttaaaaacccaggagataaagctgaagtgtggagtttttatttttgttag-ttttttttttgtttgtttgttcctgtaatcagtgtca-----tcattagtttaaaataatgagtgataagatattattcacaagtctcaaggtaatctcaaattaaaaaacatacaacagatacacaaaatataaaaagcaagacattaaaaccaccagcaaaaatagccttca-taacaggaagacagaaagtaaggaaagaagaaagaaaagatcacaaagcaagcagaaaacaaataacaaaatggcagaggtaaattcttacttataaataataacattgaatgtaaatggactaaactctccaatcaaaagacttagagtggctgaatgaatttaaaaaaaaaa--gcctgatgatatgttggcaacaagaaacaaacttcacctataaacacacacgtagactgaaaataaacagaaaaagatatcacatgcaaatggaaaccaaaaaagagcaggggtcatta-acttacatgggacacaatatatttcaagacaaaaaccataaaaagagacaaagaaggtcatta-ataatgataagctgccaattcaataagaatatatacaattgtaaatataatacgcacacaatacggaagcacctagatatataaagctaattggattagagctaaagagagagagagacccaaatac-ataatagctagaagtttcaacaccacactttcaacaatggacagattatccagacagaaaatcaacaaagaaatattggacctaatctgcactgtaaaccaaatggacctca-------------------tagatatgcacagaacttttcaaccaatggcagcagaatacacattcttctcctcagcacattgatcattcttgaggctagaccataggttatgccacaaaacaagccttaaaaatttcaaaaaatttgaagttatatcaagtatcttttttgcccacaaaagagtcaatctagaagtcaataacaaggaggattttggagactataccaaaatatagaaattacacaatatgttcctgaatgaccagtgggttaatgaataaataaacagaaaattttaaaatgtttttaagcaaataacaatggaaacacaacatatcaaaatgtgtggcatacagcaacagaagtacaaagagtatattattttttattatactttaagttttagggtacaaagaataaattttaagcctataagtgcctacatcaaaaaagtataaaaacttcaaataaactatctaatggtgcatcttaaagaactagaaaagcaagagcaaattaaaccccaaatttgtagaagaaagcaaataataaagatcaatcagaaataaatgaatttgaaatgaaaaa--aatacaaaagatcaatgaaataaaatattggttttttgaaaagat----aaaactgacaagcctttagcagacaaattaagagcaaagagagatgacccaaataaataaagtcagaggaaaatacagagaatctagaatagatggagaaattcttagacatagatgtctgcctaccaagagtaaaccatgaagaaatttgaagcataaatagaggctgggcacggtggctcatgcctataatcccagcacttttgggagaccaaggtaggtggatcacttgagggccagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaacacacacaaaaaattagacaagcatggtgacatgcaattgtaatcccagctactcaagaggcagaggcaggagaatctctttcatgtaggaggcagagactgtagtgagctgaatttgcaccactgcactccagcctgggcaacagagtaaaactccatctcaaaaaacaaaacaaaacaaaaaaa-cacataaatagaccaataacaaataacagatttaaaccataaaagactgtatcacagcaaagaaaagcctgggacctgatgaattctttgctgaattttagtttgaagttgggtagcacgatgcctccagctttgttcttttagcttaggatgctatattagtctgttttcatgctgctgttaaagccatatctgagactgggcaattttcaaaagaaagccatttaatggacttacagttccatgtagctggggaggcctcacaatcatggtggagggtgaaaggcatgtctcacatggcggcagacaagagaagaagcttgcacagggaaacacccccttatataatcgtcagatctcatgagacttattcactgtcatgagaacagcacaggaaagacctgcccctatgattcaattacctcccaccaggtccctcccacaatacgtgggaattcaaggtgagatttgggtggggacacagccaaaccatatcagatgcattggctattcaggctctcttttggttccatatgaattttaaaatagttttttttctagttctgtgaagactgtcaatggtagtttaatggaaataccattgaacgtataaattgctttggatagtatggtcattttaatactgttgattcttcctgtgcatgagcatggaatgtttttccatttgtttgtgtcgtctctgatttcttcaagcagtggtttgtagttcacctctcttgttcactgtattcctaagtattttattatttttgtagcaattgtgaatgcgagtttgttcgtgatttggctcttggcttaactgttgttggtgtataggaatgttagtgattttgcacattgattttgtatcttgagactttgctgaagttgtttatcaccttaagaggcttttgggccaagactacagggttttctagatataggattatgtcatctgcaaacagaaataatttgactgcctctcttcctgtttgactgccctttatttctttctcttgctgattgcctggccagaagttccaa-actatgttgaataggagtggtaaaagagggcatccttgtcttgtgctggctttcaaggggagttcttccagcatttgcccattcagtttggtactggttgtgggtttgtcacagatgactctcattattttgaggtacgatccatcactacctagtttattgagagtttttaaaatgaaggaatgttaaattttatcaaaacacttttctgcatctattgagataatc--gtggttttggtcttagttttttgtc--------------atttgtttatgtgatgaatcacatttattgatttgcatatgatgaaccaacctaacatctaggggatgaatcctacttactcatagtgaatacattttttgatgctgaatttggtttgccagtatttttttggattttttgcattgatgttcatcaaggatattggcctgaagttttcttattttgttgtatctctgccaggttggtaccaggatgatgctgatctcatagaatgagttatggatgagtcctcttcttcacttctttggaatagtttcagtagagatggtatcagctcttctttgcacttctggtaaatttcagctgtgaatctgtcttaccctgagctttttaaggttaataggctatttattactacctcaatttgaaaactcacttttggtctgttcaggaattccatttcttcctgattcagtattgggaaggtgtatgtgcccgtgaatttattcatttcttctagattttctagtttgtgtgtatagaggtatttataatattctccgatggttgtttgtatttctgtggggtcagtagcaatatctcccttatcatttctgattgtgtttatttgaatcttcccctcttctttattagtctagctggtggtctaactctttcatttatttattcaaaaaaaaagaaaacagctcctgaatttgttggggttttgaatggtctttcatgtctctatctcctccagttcagctctgattttggttacttcttgtcttctgctaagtttgaaatttctttactcttggttctctagttcttttagatatgatgttgggttgttaacttaagatctttctgattttttgatgtgggcacttaatgctataaa-cttcatcttaacactgccttagctgtgtctcagagattctggtaggttgtatcattttttctcattagtttcaaataacttcttgctttctgccttaatttcattattttcccaaatgttattcaggagcaggttattcaatttccatgtaatcatatggttttgagttaatgtcttagtcttaagttctaatttaattgtgctgtggtctgaaagactgtctgttgtgatttcagctcttttgcatttgctgaggaatggtgtaattctcattatgcgattaattttagagtaagtaatatgtggcaatgagaaaaatttattttcagttgttctggggtggagagtttggtagatatttatcaggtttattttaatcctaagctgagttcaggtcctgaatatctttcttacatttctgtctcaatgatctaatattgacagtggggtgttaaattcacccacttttat--tgtgtgagtctaagtctctctgaagatctctaagaaattgatttatcaatatgggtgctcctatgttgggtgcgtatatacttaagatagttagctcttcttaggttggtaataacaagcttctccaagctaaaggaggatattcgaaaccattgcaaggaagctaaaaatttg-aaaaagattagacgaatggctaactagaataaacagtgtagagaagaacttaaatgacctgatggagctgaaaaccgtggcacaacaacttcgtgacgcatgcacaagcatcactagccaatgggatcaagaggaagaaagggtatcagtgactgaagatcaaattaatgaaataaagt-----gagaagtttagagaaaaaagaataaaaagaaacaaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatttgatgggtgtacctgaaagtaacagggagaatggaaccaagttggaaaacactctgcaggatattttccaggagaacttccccaacttagcaaggcaggccaacattcaaattcaggaaatacggacaacaccacaaagatactcctcgagaagaacaaccacaagacacataattgtcagatgcaccaaggttaaatgaagg-aaaaaatgttaagcgcagccaaagagaaagggtgggttacccacaaaggaaagcccatcagactaacagcggatctctcagcacaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacgcagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaattctttacagataagcaaatgctgagagattttgtcaccatcaggcctgccttacaagagcttctgaaggaagcactaaacgtggaaaggaacaaccagtaccagccactgcaaaaacatgccaaactgtaaataccaccaatgctaggaagaaactgcatcaactaacaggcaaaataaccagctaacatcatagtgacaaga-aaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgccacagttagaagacacagactggcaaattggataaagagtcaa-gacccatcagtgtgctgtattcaggagacacatctcacatgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagcaaatggaaagc-aaaaaaaagcaggggttacaatcctcatcactgataaaataggctttaaaccaataaagataaaaagagacaaagaaggccattgcataatggtaaagggatctattcaacaagaagggctaactatcctaaatattatatgcacccaatacaggagcacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataa-gggagactttaacaccccactgtccatattagacagatcaacaagacagaa-gttaacaaggatatccaggacttgaactcagctctgcaccaagcagacctaatagacatctactgaactctccacccaaaatcaatggaatattcattcttctcagcaccacatcacacttattttaaaattgaagcaaagcac-tcgttggaagcaaagcactcctcaacaaatgt-aaaggaaagaaatcacaacgaactgtctctcagacgacagtgtaatcaaattagaactcaggattaagaaactcattcaaaaccacacaagtacatggaaactgaacagcctgctcctgaatgactactgggtaataacaaaaagaaggcagaaataaagatgttctttgaaagcaatgagaacaaagacacaatgtaccagaatctctgggacacatttaaagcagcatgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaatcggcaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaagcaggaaataactaagatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaataatcaatgaatccaggagctggttttttgaaaagatcaacaaaattgatagaccactagcaagactaataaagaagaaaagagagaaaaatcaaatagactcaataaaaaatgataaaggggatatcaccaccaatcccacagaaatacaaactaccatcagagaataccataaacacctctacacaaataaactggaaaatctagaagaaatggataaattcctagacacatacaccctcccaagaataaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggcaaaaattaatagcctatcaatcaa----aaaaagcccaggaccagatggattcacagccaaattctacca-gggtacaaagaggagacgttaccattccttctgaaactattccaatcaatagaaaaagagggaatccttcctaactcattttatgaggccagcatcatcctgatatcacagcctggcagagacacaacaaaaaaagagaatttcagaccaatatccctgatgaacattgatgcaaaaatcctcaataaaatgctggcaaaccaaatctagcagcacatcaaaaagcttatacaccacggtcacattggcttcatccctgggatgcaaggctggtttaacatacacaaatcaataaatgtaatctgtcataaaaacagaaccaaaaacaaaaaccacatgattatctcaatagatggtgaaaaggcctttgacaaaattcaacagcccttcatgctaaaaactctcaataaattaggtattgatgggatgtatctcaaaataataagagctatttatgacaaacccacagccaacagcatactaaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacata-tattggaagttctggccagggcaatcaggcaggagaaagaaataaagggtattcagttaggaaaagaggaagtcaagttgtccctgtttgcagataacatgattgtatatttagaaaaccccactgtctcagcccaaatctccttaggctgataagcaactttagcaaagtctcaggatacaaaatcaacgtgcaaaaatcacaagcattcctatacaacaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacc-aggaatccaacttacaaaggatgtgaaggacctcttcaaggagaactacaaaccacagctccacaaaataaaagaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatttctttcttcaaagaattggaaaaaaaaactactttaaagttcatatggaacccaaaaaaagagcctgcattgctaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctggcttcaaactatactacaaggctacagtaaccaaaacagtgtggtactggtaccaaaac--agatatagaccaacggaacagaacagagcactcagaaataataccacatgtctacaatcatctgatctttgacaaacctgacaaaaac--aagaaatggggaaaggattccctattt i gorGor5.CYUI01015003v1 N 0 C 0 s nomLeu3.chr25 4378472 9700 + 32716333 gaattcaaaatagctgttttttgtttgtttgtttttt-ggctttttttttttttttttttttttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcaccgcaacctccacctcccgggttcatgtgattctcctgcctcagcctcccgagtatgtgggattacaggcatgtgccatcacgcctggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctagtctcgaactcctgacctcaggtgatctgcctgccttggcctcccacagtgctgggaatacaggcataagcctccacactcagctgaaaatagctgctttgaggaaacccaatggtatctaaaataacacagagaaataattcagaatcctatcagataaatttaacaatgaaa--------------------caggcaaagattctgaagctgaaaaatgtaactgacatactgaagaatgcatcaaagtctctcaagaacagaattgatcaagcagaataaagaattactggtcttgaagatgggctatttggaaatgcacagtcagagaagac-aaaaatcaaagaagaatgaaacacaactacaagatctagaaaacagcctcaaaagggcaaatgtacaagttattggtcttaaagaggagatagagagagagagatcagggtagaacgtttattcaaagggataataacagaaaatatctcaaacctagaaaaagatatcaatattaaagtacaagaaagttatagaacacaaagcagattttacccaaagaagactacatcaagacgtgtgataattgaactcccagaggtcaagaataaagaaaagatcctaaaagtagcaagataaaagaaacaaataacatacaagggagatccaataaatctaccagcaggcttttcagtggaaactttacatgctgggagaaagtggtatgac---------------atagttaaagagctgaaggaatt-aaaaaacctatcctagaatagtacaaccagcaaaaatattcttcaaacatgacagagaaataaagactctcccagacaagaaaaacctgaagaatttcatcaatgccagacctgttctataagcaatgttaaagggaattcttcagtcag-aaaaaaaggatattaatgaacaataagaaatcatctgaagctacaaaactcactggtaatagaaagtacatgaaaaacacagaataacataacactgtaattgtggtgtgtaaactactcatatgttgagtagaaagactaaaatatgaaccaatcaaaaataataactacaacaatgtttcaaggcataggcagtacaataagatatgaaaagaaacaacaaaaagtttaaaaagccaggagataaagctgaagtgtggagtttttgtttttgttagtttttttc----tttgtttgttcctgtaatcagtgttaagttgtcattagtttaaaataatgagtgataagatattattcacaagtctcaaggtaacctcaaattaaaaaccatgcaacagatacacaaaatataaaaagcaagacattaaaaccaccagcaaaaatcaccttcactaacaggaagacagaaagtaaggacagaagaaagaaaagatcacaaagcaagcagaaaacaaataacaaaatggcagaggtaaattcttacttataaataacaacattgaatgtaaatggactaaactctccaatcaaaagacttacagtggctgaatgaattaaaaaaaaaaaatgcctgatgatatcttggcaacaagaaacaagcttcacctataaagacacacgtagactgaaaataaacagaaaaagatatcacatgcaaatggaaaccaaaaaagagcaggggtcattatacttacaagggacacaatatatttcaagaaaaaaaccataaaaagagacaaagaaggtcattatataatgatacgcggccaattcaacaagaatatatacaattgtaaatataatacgcacacaatacggaagcacctagatatataaagctaattggattagagctaaagagagacagagacccaaatacagtaatagctagaagtttcaacaccacacttt-----------------------cagaaaatcaatgaagaaatattggacctaatctgcactataaaccaaatggacctcatagatatgtacagaacatttagatatgtacagaacatttcaaccaatggcagcagaatacacattcttctcctcagcacattgatcattcttgaggctaaac-------------------caagccttaagaatttcaaaaaatttgaagttatatcaagtatcttctttgcccacaaaagagtcaatctagaagtcaataacaagggggattttggagactataccaaaatatagaaattacacaatatgtccctgaatgaccagtgggttgatgaataaataaatagaaaattttaaaacttttttcagcaagtaacaatggaaacacaacatatcaaaatgtgtggcatacagcaacagaagtacaaagatta-------------tata------------------------------ttaagcctacaagggcctacatcaaaaaagtataaaaacttcaaataaagtatctaatggtgcatcttaaagaactagaaaagcaagagcaaattaaaccccaaattagtagaagaaagcaaataataaagatcaatcagaaataaatgaaattgaaatgaaaaaacaatacaaaatatcaatgaaataaaataatggttttttgaaaagataaacaaaattgacaagccttttgcagacaaattaagaacaaagagagatgacccaaataaataaagtcagagcaaaatacagagaatctagaacagatggagaaattcttagacatagatgtctgcctaccaagagtaaaccatgaagacatttgaaacataaatagaggctgggcacggtggcttatgcctgtaatcccagcacttttgggagcccaaggtaggtggatcacttgaggtccagagtttgagaccagcctggccaacatagtgaaaccccatctctactaaaaacacacacaaaaaattagacaggcatggtgacatgcaattgtaatcccagctactcaagaggcagaggcaggagaatctctttcatgtaggaggcagagactgtagtgagctgaatttgcatcactgcactccagcctgggcaacagagtaaaactccatctcaaaaaacaaaacaaaacaaaaaaa-cacataaatagaccaataacaaataacagatttaaaccataaaagactgtatcacagcaaagaaaagcctgggacctgatgaattctttgctgaattttagtttgaagttgggtagagcaatgcctccagcattattcttttagcttaggatgctatattagtctgttttcatgctgctgataaagacata-ctgagactgggcaattttcaaaagaaagccatttaatggacttacagttccatgtagctggggaggcctcacaatcatggtggagggtgaaaggcttgtctcacatggcagcagacaagagaaggagcttgtgcagggaaacacccccttatataatcatcagacctcatgagacttattcactgtcatgagaacagcacaggaaagacctgcccctatgattcaattacctcccaccaggtccctcccacaatacatgggaattcaaggtgagatttgggtggggacacagctaaaccatatcagatgcattggctattcaggctctcttttggttccatatgaattttaaaatag-tttttttctagttctgtgaagactgtcaatggtagcttaatggaaataccattgaatgtataaattgctttggatagtatggtcattttaatactattgatgcttcctatgcatgagcatggaatgtttttccatttgtttgtgtcatctctgatttctccgagcagtggtttttagttcacctctcttgttcactgtattcctaagtattttattatttttgtggcaattgtgaatgcgagtttattcgtgatttggctcttggcttaactgttgttggtgtataggaatgttagtgattttgcacattgattttgtatcttgagactttgctgaagttgtttatcaccttaagaggcttttgggccaagaccatagggttttctagatataggattatgtcatctgaaaacagaaataatttgactgcctctcttcctgttcgactgccctttatttctttctcttgctgattgcctggccagaagttccaatactatgttgaataggagtggtaaaagagggcatccttgtcttgtgctggctttcaaggggagtgcatccagcatttgcccattcagtatggtattggttgtgggtttgtcacagatgactgtcattattttgaggtatgatccgtcactacctagtttattgagagtttttaaaatgaaggaatgttaaactttatcaaaacccttttctgtatctattgagataatcacgtggcttttgtcttagttttttgtctttaggtttttgtcttttgtttatgtgatgaatcacatttattgatttgcatatgatgaaccagcctggcatctaggggatgaatcctacttattcatagtgaatgcactttttgatgctgaatttggtttgccagtattttgttggattttttgcatcaatgttcatcaaggatattggcctgaagttttcttattttgttgtatctctgccaggttcgtatcaggatgatgctggtctcatagaatgagttatggatgagtcctcttcttcacttctttggaatagtttcactagagatggtaccagctcttctttgcacatctggtaaatttcagctgtgaatctgtcttatcccgagctttttaaggttggtaggctatttattactacctcaatttgaaaactcacttttggtctgttcaagaattccatttcttcctgattcagtattgggaaggtgtatatgcccgtgaatttattcatttcttctagattttctagtgtgcgtgtatagaggtatttgtaatattctctgatggttgtttgtatttctgtggggtcagtagcaatatctcccttatcatttctgattgtgtttatttgaatcttcccctcttctttattagtctagctggtggtctaactcttttatttatttattcaaaaaa----aaaacagctcctgaatttgttggggttttgaatggtctttcatgtctctatctccttcagttcagctctgattttagttacttcttgtcttctgctaagtttgaaatttgtttacacttggttctctagttcttttagatgtgatgttaggttgttaatttaagatctttctaattttttgatgtgggcacttaatgctataaactttcatcttaacactgccttagctgtgtcccagagattctggtaggttgtatctttttttctcattagtttcaaataacttcttgctttctgccttaatttcattatttacccaaaagttattcaggagcaggttattcaatttccatgtagtcatatggttttgagttaatgtcttagtcttgagttctaatttaattgtgctgtggtctgaaagactgtctgttgtgatttcagctcttttgcgtttgctgaggaatgttgtaattctcattatgcggttaattttagagtaagtaatatgtggcaatgagaaaaatttatattcagttattctggggtggagagtttggtagatatttatcaggtttattttaatccaaagctgagttcaggtcctgaatatctttcttacatttctgtctcaatgatctaatattgacagtggggtgttaaattctcccactttaattgtgtgtgagtttaagtctctttgaatatctctaagaaattgatttatcaatatggatgctcctgtgttgggtgcatatatatttaagatagttagcttttcttaggtcggtaataacaagcttctccgagctaaaggagaatgtttgaaatcattgcaagtaagctaaaaacttgaaaaaagaatagatgaatggctaactagaataaaaagtgtagagaagaacttaaatgacctgatggagctgaaaaccatggtacaagaacttcgtgatgcatgcacaagcttcaatagccgatgggatcaagtggaagagagggtatcagtgactgaagatcaaattaatgagataaagtgaaaagagaagtttagagaaaaaagagtaaaaag----aaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatttgataggtgtacttgaaagtgacagggagaatggaaccaagttggaaaacactct------------ccaggagaacttccccaacctagcaaggcaggccaacattcaaattcaggaaatacagagaacaccacaaagatactcctcgagaagagcaaccacaagacacataattgtcagatgcaccaaggctaaatgaagg--aaaaatgttaagggcagccagagagaaaggtcgggttacccacaaaggaaagcccatcagactaacagtggatctctcagcagaaactgaacaagccagaagagagtgggagccaatattcaaca-tattaaagaaaagaattttcaacccagaatttcatatccagccaagctaagcttcatatgtgaaggagaaataaaattctttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagcactcaacatggaaatgaacaactggtaccatccactgcaaaaacatgccaaactgtaaagaccactgatgctaggaagaaactgcatcaactaatgggcaaaataaccagctaacatcataatgacaagatcaaattcacacataacaatattaaccttaaatgtaaatgagctaaatgctccagttaaaagacacagactggcaaattggat--agagtcaaggacccatcagtgtgctgtattcaggagacacatctcacatgcagagacacacatagactaaaaataaagggatggaggaagatctaccaagcaaatggaacgcaaaaaaaaagcaggggttacaatcctagtcactgataaaataggctttaaaccaataaagatcaaaagagacaaagaaggccattgcatcatggtaaagggatctattcaacaagaagagctaactatcctaaatattatatgcacccaatacaggagcacccagattcataaagcaagtccttagggacttgcaaagagatttagactcccacacaataataatgggagactttaacaccccactatcaatattagacagattgacaagacagaaagttaacaaggatatccaggacttgaactcacctctgcaccaagcagacctaatagacatctaccgaactctccacccaaaatcaatggaatatacattcttctcagcaccgcatcacacttattttaaaactgac------cacattgttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatcacaacaaactgtctctcagaccacaatgtgatcaaattagaactcaggattaagaaactcactcaaaaccacacaagtacatggaaactgaacaacctgctcctgaatgactactgggtaataacaaaaagaaggcagaaataaagatgctctttgaaaccaatgagaacaaagacataacacaccagaatctctgggacacatttaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcagaaaagatctaaaatcaacaccctaacatcacaattaaaagaactagagaagcaagagcaaacatattcaaaagctagcagaaggcaagaaataactaatatcagagcagaactgaaggagatagagacacaaaaaaaccttaaaaaaatcaatgaatccaggagctggttttttgaaaagaccaacaaaattgatagaccactagcaagagtaataaagaagaaaagagagaaaaatcaaagagactcaataaaaaatgataaaggggatatcaccaccaatcccacagaaatacaatctaccaccagagaatactataaacacgtctacacaaataaactagaaaatctagaagaaatggataaattcctggacacatacactctcccaagattaaaccagggagaagtcggatctctgaatagactaataacaggctctgaaattgaggcaataattaatagcctaccaaccaa----aaaaagcccaggaccagatggattcacagctgaattctaccagaggtacaaagaggagctgttaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaaccaaaaaagaaaatttcagaccaatatccctgatgaacatcaatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccacaatcaagttggcttcatccctgggatgcaaggctggcttaacatacacacatcaataaatgtaatccatcatataaacagaaccaaaaacaaaaaccacatgattatctcaatagatggtgaaaaggcctttgacaaaattcaacagccctccatgccaaaaactctcaataaactaggtgttgatgggacgtatctcaaaataataagagctatttatgacaaacccacagccaatagcatactaaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagagatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaagaaataaagggtactcagttaggaaaagaggaagtcaaattgtccctgtttgcagataacatgattgtatatttagaaaatcccatcgtctcagcccaaatctccataagctgataggcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagcattcctatacaccaataacagacaaacagagagtcaaatcctgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaaaggatgtgaaggacctcttcaaggagaactacaagccacagctcaacaaaataaaagaggacacaaacaaatagaagaacattccatgctcatggataggaagtatcaatatcatgaaaatggccatattgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaaaa-ctactttaaagttcatatggaacc--aaaaaagagcctgcattgccaagacaatcctaagccaaaggaacaaagctggaggcatcatgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgatactggtaccaaaacagagatatagaccaacagaacagaacagagccctcagaaataataccacatgactactaccatctgatctctgacaaacctgacaaaaacaaaagaaatggggaaagggttccctattt i nomLeu3.chr25 N 0 C 0 a score=1250050.000000 s hg38.chr21_KI270874v1_alt 9765 550 + 166743 aataaatggtgctgggaaaactggatagccatatgtagaaagctgaaactggatcccttccttaaaccttatacaaaaattaattcaagatggattaaagattcaaatattagacctaaaaacataaaatccctagaagaaaacctaggcattaccattcaggacataggcatgggctaggacttcatgactaaaacactaaaagcaatggcaacgaaagccaaaatagacaaatgggatctaattaaactgaagagcttctgcacagcaaaataaactaaccatcagagtgaacaggcaacctaaagaatgggagaaaatttttgcaatctacccatctgacaaggggctaatatccagaatctacaaagaactgaaacaaatttacaag-aaaaaatcaaacagccccatcaaaaagtgggcaaaggaaatgaacagacacttctcaaaaagaagacctttatgcagccaacagacacatg-aaaaaatgttcatcatcactggccatcagagaaatgtaaatcaataccaca-tgagataccatctcaca s panTro5.chr21 3626121 551 + 33445071 aataaacggtgctgggaaaactggatagccatatgtagaaagctgaaactgtatcccttccttaaaccttatacaaaaattaattcaagatggattaaagatttaaatgttagacctaaaaacataaaatccctataagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatgactaaaacactaaaagcaatggcaacgaaagccaaaatagacaaatgggatctaattaaaccgaagagcttctgcacagcaaaataaactaaccatcagagtgaacaggcaacctaaagaatgggagaaaatttttgcaatctacccatctgacaaagggctaatatccagaatctgcaaagaactgaaacaaatttacaag-aaaaaatcaaacagccccatcaaaaagtgggcgaaggaaatgaacagacacttctcaaaaagaagacctttatgcagccaacagacacatg-aaaaaatgctcatcatcactggccatcagagaaatgtaaatcaataccacaatgagataccatctgaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17261409 551 + 46275980 aataaacggtgctgggaaaactggatagccatatgtagaaagctgaaactgtatcccttccttaaaccttatacaaaaattaattcaagatggattaaagatttaaatgttagacctaaaaacataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatgactaaaacactaaaagcaatggcaacgaaagccaaaatagacaaatgggatctaattaaaccgaagagcttctgcaccgcaaaataaactaaccatcagagtgaacaggcaacctaaagaatgggagaaaatttttgcaatctacccatctgacaaagggctaatatccagaatctacaaagaactgaaacaaatttacaag-aaaaaatcaaacagccccatcaaaaagtgggcgaaggaaatgaacagacacttctcaaaaagaagacctttatgcagccaacagacacatg-aaaaaatgctcatcatcactggccatcagagaaatgtaaatcaataccacaatgagataccatctgaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3200091 549 - 13858734 aataaacagtgctgggaaaactggatagccatatgtagaaagctgaaactggatcccttccttaaaccttatacaaaaaataattcaagatggattaaagatttaaatgttggacctaaaaacataaaatccctagaagaaatcctaggcaatacccttcaggacataggcatgggcaagtacttcatgactaaaacaccaaaagcaatggcaac-aaagccaaaacagacaaa-gggatctaattaaactgaagaacttctgcacagcaaaataaactaaccatcagagtgaacaggcaacctaaagaatgggagaaaatttttgcaatctacccatctgacaaagggctaatatccagaatctacaaataactgaaacaaatttacaag-aaaaaatcaaacagccccatcaaaaagtgggtgaaggacatgaacagacacttctcaaaaagaagacctttatgcagctaacagacacatg-aaaaaatgctcatcatcactggccatcagggaaatgtaaatcaatacaacaatgagataccatctcaca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4388172 551 + 32716333 aataaacggtgctgggaaaactggctagccatatgtagaaagctaaaactggatcccttccttaaaccttatacaaaaattaattcaagatggattaaagattgaaatgttagacctaaaaacataaaatccctagaagcaaacctaggcaatacccttcaggacataggcatgggcaagtacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattaacaaatgggatctaattaaactgaagagcttctgcacagcaaaataaactaaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgcacactacccatctgacaaagggctaatatccagaatctacaaagaacttaaacaaatttacaag-aaaaaatcaaacaaccccatcgcaaagtgggcgaaggaaatgaacagacacttctcaaaaagacgacctttatgcagccaacagacacatg-aaaaaatgctcatcatcactggccatcagagaaatgtaaatcaaaaccacaatgagataccatctcaca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155343432 544 - 185818997 aataaatggtgctatgaaaactggctagccatatgtagaaagctgaaactggatcccttccttacatcttatacaaaaattaattcaagatgaatt----acttaaatgttagacctaaaaccacaaaaatcctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattagactaaagagcttctgcacatcaaaagaaact-accatcagagtgaacaggcaactgacagaatgggagaaaatttttgcagtctacccatctgacaaatggctaatatccagaattgacaaagaacttaaacaaatttacaagaaaaaaatcaaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctc-aaaagaagacatttgtacagccaaccgacacatgaaaaaaatgc---tcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcaca i rheMac8.chr3 N 0 C 0 s macFas5.chr3 162166154 544 - 192294377 aataaatggtgctatgaaaactggctagccatatgtagaaagctgaaactggatcccttccttacatcttatacaaaaattaattcaagatgaatt----acttaaatgttagacctaaaaccacaaaaatcctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattagactaaagagcttctgcacatcaaaagaaact-accatcagagtgaacaggcaacctacagaatgggagaaaatttttgcagtctacccatctgacaaatggctaatatccagaattgacaaagaacttaaacaaatttacaagaaaaaaatcaaacaaccccatcaaaaagtgggcaaaggatatgaacagacattgctc-aaaagaagacatttgtacagccaaccgacacatgaaaaaaatgc---tcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcaca i macFas5.chr3 N 0 C 0 s chlSab2.chr2 14951623 547 - 90373283 aataaatggtgctatgaaaactggctagccatatgtagaaagctgaaactggatcccttccttacatcttatacaaaaattaattcaagatgaatt----acttaaatgttagacctaaaaccacaaaaatcctagaagaaaaccgaggcaataccattcaggacataggcatgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattagactaaagagcttctgcacatcaaaagaaact-accatcagagtgaacaggcaacctacagaatgggagaaaatttttgcagtctactcatctgacaaagggctaatatccagaatttacaaagaacttaaacaaatttacaagaaaaaaatcaaacaaccccatcgaaaagtgggcaaaggatatgaacagacacttctc-aaaagaagacatttgttcagccaactgacacatgaaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcaca i chlSab2.chr2 N 0 C 0 a score=376353.000000 s hg38.chr21_KI270874v1_alt 10315 130 + 166743 ccaattagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatttggagaaataggaacacttttacactgttggcaggagtgtaaactagttcaaccattgtggaagtcagtgtggt s panTro5.chr21 3626672 130 + 33445071 ccaattagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggcaggagtgtaaactagttcaaccattgtggaagacagtgtggt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17261960 130 + 46275980 ccaattagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggcaggagtgtaaactagttcaaccattgtggaagacagtgtggt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3200640 130 - 13858734 ccaattagaatggtgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggcaggagtgtaaactagttcaaccattgtggaagacagtgtggt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4388723 130 + 32716333 ccaattagaacggccatcattaaaaagtcaggaaacaacaggtgctggagagcctgtggagaaataggaacatttttacactgttggtgagactctaaactagttcaaccattgtggaagacagtctggc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155343976 122 - 185818997 ccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaatagga--------acactgttggtgggactgtaaactagttcaaccgttgtggaagacaatacggc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162166698 122 - 192294377 ccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaatagga--------acactgttggtgggactgtaaactagttcaaccgttgtggaagacaatacggc i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14952170 130 - 90373283 ccagttagaatggggatcattaaaaagtcaggaaacaacaggtgctggagaagatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccgttgtggaagacaatatcgc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2116661 130 + 4234846 ccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggggggactgtaaactagttcaaccattgtggaagacaatacggc i manLeu1.NW_012102865v1 N 0 C 0 a score=780814.000000 s hg38.chr21_KI270874v1_alt 10445 207 + 166743 gattcctcaaggacctagaaccagaaataccatttgacccagccatcacattactggatatatacccaaaggattacaaatcatgctgctataaagacacatgcacatgtatgtttatcgtggcattattcacaatagcaaagacttggaaccaacccaaatatccatcaatgatagactggattaagaaaatgtggcacatataca s panTro5.chr21 3626802 207 + 33445071 gattcctcaaggacctagaaccagaaataccatttgacccagccatcccattactggatatatacccaaaggattataaatcatgctgctataaagacacatgcacatgtatgtttatcgtggcattattcacaatagcaaagacttggaaccaacccaaatatccatcaatgatagactggattaagaaaatgtggcacatataca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262090 207 + 46275980 gattcctcaaggacctagaaccagaaataccatttgacccagccatcccattactggatatatacccaaaggattataaatcatgctgctataaagacacatgcacatgtatgtttatcgtggcattattcacaatagcaaagacttggaaccaacccaaatatccatcaatgatagactggattaagaaaatgtggcacatataca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3200770 207 - 13858734 gattcctcaaggacctagaaccagaaataccatttgacccagccatcccattactggatatatacccaaaggattataaatcgtgctgctataaagacacatgcacatgtatgtttatcgtggcattattcacaatagcaaagacttggaaccaaccctgatatccatcaatggtagactggattaagaaaatgtggcacatataca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4388853 199 + 32716333 aattcctcaaggatctagaaccagaaacatcatttgacccagccatcccattactgggtatatactcaaaggattataaatcatgct--------gacacatgcacacgtatgcttattgtggcattattcacaatagcaaagacttggaaccaacccaaatgtccatcaatgatagactggattaagaaaatatggcacatatgca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344098 207 - 185818997 gattcctcaaggatctaaaactagaaacaccgtctgacccagccatcccattactgagtatatacccaaaggattataaatcatgcctctataaagacatatgcacacgtatgtttatcatggcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgacagactggattaagaaaacgtgacacatataca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162166820 207 - 192294377 gattcctcaaggatctaaaactagaaacaccgtctgacccagccatcccattactgagtatatacccaaaggattataaatcatgcttctataaagacatatgcacacgtacgtttatcgtggcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgacagactggattaagaaaacgtgacacatataca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8644798 207 + 9440265 gattcctcaaggatctaaaactagaaacaccgtctgacccagccatcccattactgagtatatacccaaaggattataaatcatgcttctataaagacatatgcacacgtatgtttatcgtggcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgacagactggattaagaaaacatgacacatataca i macNem1.NW_012019910v1 N 0 C 0 s chlSab2.chr2 14952300 207 - 90373283 gattcctcaaggatctaaaactagaaacaccgtctgacccagccatcccattactgagtatatacccaaaggattataaatcatgctgctataaagacacatgcacacgtatgtttattgcggcactattcacaataggaaagacttggaaccaacccaaatgtccatcaatgacagactggattaagaaaatgtggcacatataca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2116791 207 + 4234846 aattcctcaagaatctaaaactagaaacaccatctgacccagccatcccattactgggtatatacccaaaggattggaaatcatgcttctataaagacatatgcacgggtatgtttatcgtggcactatttacaatagcaaagacttggaaccaacccaaatgtccatcaatgacagactggattaagaaaatgtggcacatacaca i manLeu1.NW_012102865v1 C 0 C 0 a score=254327.000000 s hg38.chr21_KI270874v1_alt 10652 59 + 166743 ccatggaatactatgcagccataaaaaaaggatgagttcatgtcctttgcagggacatg s panTro5.chr21 3627009 58 + 33445071 ccatggaatactatgcagccataaaaaa-ggatgagttcatgtcctttgcagggacatg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262297 59 + 46275980 ccatggaatactatgcagccataaaaaaaggatgagttcatgtcctttgcagggacatg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3200977 58 - 13858734 ccatggaatactatgcagccataaaaaa-ggatgagttcatgtcctttgcagggacatg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389052 58 + 32716333 ccatggaatactatgcagccataaaaat-ggatgagttcatgtcctttgcagggacatg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344305 58 - 185818997 ccatggaatactatgtagccataaaaaa-cgatgacttcttctcctttgtagggacatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167027 58 - 192294377 ccatggaatactatgtagccataaaaaa-cgatgacttcttctcctttgtagggacatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645005 58 + 9440265 ccatggaatactatgcagccataaaaaa-cgatgacttcatctcctttgtagggacatg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376095 58 + 21915920 ccatggaatactatgtagccataaaaaa-cgatgacttcttctcctttgtagggacacg i cerAty1.NW_012002954v1 N 0 C 0 s chlSab2.chr2 14952507 58 - 90373283 ccatggaatactatgtagccataaaaaa-cgatgacttcctctcctttgtagggacatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2116998 58 + 4234846 caatggaatactatgtagccataaaaaa-ggatgagttcttctcctttgtagggacatg i manLeu1.NW_012102865v1 C 0 C 0 a score=1588221.000000 s hg38.chr21_KI270874v1_alt 10711 308 + 166743 gatgaagctggaaaccatcattctgagcaaactatcacaaggacagaaaaccaaacactatgtgttctcactcacaggtgggaattgaacaatgagaacacttggacacagggtggggaacaacacacaccggggcctgtcatggggtagggggctgggggagggatagcattaggagaaatacctaatgtaaatgatgagttaatgggtgcagcacaccaacatggcac----------------------------atgtatacatgtgtaacaaa-ctgcacgttgt-gcacatgtaccctagaacttaaagtatagt----aagaaaaaagaa---------------------------------------------------aATAA s panTro5.chr21 3627067 308 + 33445071 gatgaagctggaaaccatcattctgagcaaactatcacaaggacagaaaaccaaacactatgtgttctcactcacaggtgggaattgaacaatgagaacacttggacacagggtggggaacaacacacaccggggcctgtcatggggtggggggctgggggagggatagcattaggagaaatacctaatgtaaatgatgagttaatgggtgcagcacaccaacatggcac----------------------------atgtatacatgtgtaacaaa-ctgcacgttgt-gcacatgtaccctagaacttaaagtatagt----aagaaaaaagaa---------------------------------------------------aATAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262356 308 + 46275980 gatgaagctggaaaccatcattctgagcaaattatcacaaggacagaaaaccaaacactatgtgttctcactcacaggtgggaattgaacaatgagaacacttggacacagggtggggaacaacacacaccggggcctgtcatgggctggggggctgggggagggatagcattaggagaaatacctaatgtaaatgatgagttaatgggtgcagcacaccaacatggcac----------------------------atgtatacatgtgtaacaaa-ctgcacgttgt-gcacatgtaccctagaacttaaagtatagt----aagaaaaaagaa---------------------------------------------------aATAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201035 302 - 13858734 gacgaagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacactatgtgttctcactcataggtgggaattgaacaatgagaatacttggacaca-ggtggggaacaacacacaccggggcctgtcatggggt-gggggctgggggaggaatagcattaggagaaatacctaatgtaaatgatgagttaatgggtgcagcacaccaacatggcac----------------------------atgtatacatatgtaacaaacctgcaagttgt-gcacatgtaccctagaact-----tatagt----aagaaaaaagaa---------------------------------------------------aaTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389110 308 + 32716333 gatgaagctggaaaccatcagtctgagtaaactatcgcaaggacagaaaaccaaacactgcgtgttctcactcataggtgggaactgaacaatgagaacacttggacatagggtggggaacatcacacaccggggcctgtcatggggc-aggggctgggggagggatagcattaggagaaatacctaatgtaaatgatgagttaatgggtgcagcacaccaacgtggcac----------------------------atgtatacatgtgtaacaaacctgcacgttgt-gcacatgtaccctagaacttaaagtatgat----aagaaaaaagaa---------------------------------------------------aATAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344363 354 - 185818997 gatgcagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcattcataggtgggaactgaacaatgagaacacttggacacaggaaggggaacatcacacactggggcctgtcatggcatggggggcagggggaggtgtagcattagaagaaatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggcatatatatatatatatatatatatatatatatatatatatatgtaacaaacctgcaccttgt-gcacctgtaccctagaatttaaagtataattttaaaaaaagaaaaaCTAAACTAAACTA--------------------------------------AAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167085 332 - 192294377 gatgcagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcattcataggtgggaactgaacaatgagaacacttggacacaggaaggggaccatcacacactggggcctgtcatggcatggggggcagggggaggtgtagcattagaagaaatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggcat----------------------atatatatatatatatatgtaacaaacctgcaccttgt-gcacctgtaccctagaatttaaagtataattttaaaaaaagaaaaaCTAAACTAAACTA--------------------------------------AAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645063 369 + 9440265 gatgaagctggaaaccatcattctcagcaaactatcgcaagaacagaaaaccaaacaccacatgttctcactcataggtgggaactgaacaatgagaacacttggacacaggaaggggaacatcacacactggggcctgtcatggcatggggggcagggggaggtgtagcattagaagaaatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggtgt-----------------------tacatatatatatatatgtaacaaacctgcaccttgt-gcacctgtaccctagaatttaaagtataattttaaaaaaagaaaaaCtaaactaaactaaaataaataaatctaaaataaataaataaatctaaaataaata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376153 331 + 21915920 gatgcagctggaaaccatcattctgagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcattcataggtggaaattgaacaatgagatcacttggacacaggaaggggaacatcacacactggggcctgtcatggcatggggggcagggggagggatagcattagaagaaatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggcat------------------atatatatatatatatatatatgtaacaaacctgcaccttgt-gcacctgtaccctagaatttaaagtataattttaaaaaaagaaaaaCtaaaata-------------------------------------------aaata i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14952565 326 - 90373283 gatgcagctggaaaccatcattctcagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcattcataggtggaaattgaacaatgagaacacttggacacaggaaggggaacatcacacactggggcctgtcatggcatggggagcagggcaagggatagcattatgagaaatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggcac----------------------------atatatatatatgtaacaaacctgcaccttgt-gcacctgtaccctagaacttaaagtataattttaaaaaaagaaaaaCTAAACTAAACTA--------------------------------------AAATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2117056 327 + 4234846 gatgaagctggaaaccatcatcctgagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcactcataggtggaaattgaacaatgagaacacttggacacagaaaggggaacatcacacactggggcctgtcatggcatggggggcagggggagggatagcattaggagaaatacctaatgtaaatgacgagttaatgggtgcagcacactaacatggcac----------------------------ttatatatatatgtaacaaacctgcaccttgtggtacctgtaccctagaacttaaagtataattttaaaaaaagaaaaaCTAAAATAAAATA--------------------------------------AAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124008 331 - 13750039 gatgaagctggaaaccatcattctcagcaaactattgcaaggacagaaaaccaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacttggacacaggaaggggaacatcacacactggggcctgtcatggcatgagggacagggggagggatagcattaggagaaatacctaatgtaaatgacgagttaatgggtgcaacacaccaacatggcac----------------------------atatatatatatgtaacaaacctgcaccttgt-gcacctataccctagaacttaaagtataattttaaaaaaagaaaaaCtaaactaaaataaaata---------------------------------aaata i colAng1.NW_012120598v1 N 0 C 0 a score=42588.000000 s hg38.chr21_KI270874v1_alt 11019 6 + 166743 AATAAA s panTro5.chr21 3627375 6 + 33445071 AATAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262664 6 + 46275980 AATAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201337 6 - 13858734 AATAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389418 6 + 32716333 AATAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344717 6 - 185818997 AATAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167417 6 - 192294377 AATAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645432 6 + 9440265 aataaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376484 6 + 21915920 aataaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14952891 6 - 90373283 AATAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2117383 6 + 4234846 AATAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124339 6 - 13750039 aataaa i colAng1.NW_012120598v1 C 0 C 0 s mm10.chr16 78087852 6 + 98207768 AATAAA i mm10.chr16 N 0 C 0 a score=19233.000000 s hg38.chr21_KI270874v1_alt 11025 6 + 166743 TCCTTA s panTro5.chr21 3627381 6 + 33445071 TCCTTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262670 6 + 46275980 TCCTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201343 6 - 13858734 TCCTTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389424 5 + 32716333 TCTTT- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344723 6 - 185818997 TCCTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167423 6 - 192294377 TCCTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645438 6 + 9440265 tcctga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376490 6 + 21915920 tcctga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14952897 6 - 90373283 TCCTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2117389 6 + 4234846 TCCTAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124345 6 - 13750039 tcctga i colAng1.NW_012120598v1 C 0 C 0 s mm10.chr16 78087858 6 + 98207768 GTCACT i mm10.chr16 C 0 C 0 s canFam3.chr31 13777777 6 + 39895921 TCATGA i canFam3.chr31 N 0 C 0 a score=77696.000000 s hg38.chr21_KI270874v1_alt 11031 11 + 166743 AAAAAA-TAAAA s panTro5.chr21 3627387 11 + 33445071 AAAAAA-TAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262676 11 + 46275980 AAAAAA-TAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201349 11 - 13858734 AAAAAA-TAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389429 11 + 32716333 AAAAAT-TAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344729 12 - 185818997 AAAAAATTAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167429 12 - 192294377 AAAAAATTAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645444 12 + 9440265 aaaaaattaaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376496 12 + 21915920 aaaaaattaaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14952903 12 - 90373283 AAAAAATTACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2117395 12 + 4234846 AAAAAATTACAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124351 12 - 13750039 aaaaaattacaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21879383 11 + 50472720 -aaaaattcaaa i calJac3.chr21 N 0 C 0 s saiBol1.JH378168 4990204 11 + 13128814 -aaaaattaaaa i saiBol1.JH378168 N 0 C 0 s cebCap1.NW_016107322v1 9564728 11 - 14377064 -aaaaattaaaa i cebCap1.NW_016107322v1 N 0 C 0 s aotNan1.NW_018487195v1 8688064 11 + 9889416 -aaaaattaaaa i aotNan1.NW_018487195v1 N 0 C 0 s mm10.chr16 78087864 11 + 98207768 -GTAAATtatat i mm10.chr16 C 0 C 0 s canFam3.chr31 13777783 11 + 39895921 AATACATTAAG- i canFam3.chr31 C 0 C 0 a score=1179072.000000 s hg38.chr21_KI270874v1_alt 11042 117 + 166743 ACCAAAATATGTATAAGAGAAGTATGGAAATAAATTCCTGTAGGAGAAAAGGTATTGTGTAAACTAACT---GAATTATATTGTGCAACCTAGCTGAATTAAACATTAA---TTTTTTGACTA s panTro5.chr21 3627398 117 + 33445071 ACCAAAATATGTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAGAAAAGGTATTGTGTAAGCTAACT---GAATTATATTGTGCAACCTAACTGAATTAAACATTAA---TTTTTTGACTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262687 117 + 46275980 ACCAAAATATGTATAAGAGAAGTATGGAAATAAATTCTGGTAGGAGAAAAGGTATTGTGTAAGCTAACT---GAATTATATTGTGCAACCTAACTGAATTAAACATTAA---TTTTTTGACTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201360 118 - 13858734 ACCAAAATATGTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAGAAAAGGTATTGTGTAAGCTAACT---GAATTATATTGTGCAACCTAACTGAATTAAACATTAA--TTTTTTTGACTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389440 118 + 32716333 ACCAAAATATGTATAAGAGAAGCAAGGAAATAAATTCTGGTGGGAGAAAAGGTATTGTGTAAGCTTACT---GAATTACATTGTGTAACCTAACTGAATTAAATATTAA--TTTTTTTGACTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344741 118 - 185818997 ACCAAAATATCTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAAAAAAGCTATTGTGTAAGCTAACT---GAATTATATTGTGTAACCTAAATGAATTAAATATTAA--TTTTTTTGACTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167441 118 - 192294377 ACCAAAATATCTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAAAAAAGCTATTGTGTAAGCTAACT---GAATTATATTGTGTAACCTAAATGAATTAAATATTAA--TTTTTTTGACTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645456 118 + 9440265 accaaaatatctataagagaagtatggaaataaatTCCAGTAGGAAAAAAGCTATTGTGTAAGCTAACT---GAATTATATTGTGTAACCTAAATGAATTAAATATTAA--TTTTTTTGACTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376508 118 + 21915920 ACCAAAATATCTATAAGAGAAGTATGGAAATAAATTCCGGTAGGAAAAAAGGTATCGTGTAAGCTAACT---GAATTATATTGTGTAACCTAAATGAATTAAATATTAA--TTTTTTTGACTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14952915 118 - 90373283 ACCAAAATATCTATGAGAGAAGTATGGAAAAAAATTCCAGTAGGAAAAAAGGTATTGTGTAAGCTAACT---GAATGATATTGTGTAACCTAAATGAATTAAATAATAA--TTTTTTTGACTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2117407 118 + 4234846 ACCAAAATATCTATGAGAGAAGTATGGAAATAAATTCCAGTAGGAAAAAAGGTATTGTGTAAGCTAACT---GAATTATATTGTGTAACCTAAATGAATTAAATATTAA--TTTTTTTTACTA i manLeu1.NW_012102865v1 C 0 I 816 s colAng1.NW_012120598v1 124363 117 - 13750039 actaaaataTCTACGAGAGAAGTATGGAAATAAATTCCAGTAGGAAAAAAGGTATTGTGTAAGCTAATT---GAATTATATTGTGTAACCTAAATGAATTAAATATTAA---TTTTTTGACTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21879394 111 + 50472720 aCAACAATATGTATCAGAGCTGTATGGAAATAAATTCTGGTAGGAGAAAAAGCATTGTGTAAGCTAACT---GA-----ATTGTGTAACCT-ACTGGATTAAATATTAA---TTTTTTTACTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4990215 118 + 13128814 aCAACAATATGCGTAAGAGAGGTATGGAAATCAATTCTGGTAGAAGAAAAAGTATTGTGTAAGCCAACT---GAATTATATTGTGGAACCTAACTGAACTAAATATCAA--TTTTTTTTACTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9564739 120 - 14377064 aCAACAATATGTATAAGAGAGGTATGGAAATAAATTCTGGTAGGAGAAGAAGTATTATGTAAGCTAACT---GAATTATATTGTGTAACCTAACTGAATTAAATATTAATTTTTTTTTTACTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8688075 113 + 9889416 aCAACAATATGTATAAGAGAGGTATGGAAATAAATTCTGGTAGGAGAAAAAGTATTGTGTAAGCTAACT---GA-----ATTGTGTAACCTAACTGAATTAAATATTAA--TTTTCTTTACTA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20715812 106 - 38779656 ACTAATACAAAAACATAACAAATATCCAGAGAAATTCCCACAGGAGAAAAA-TATTATGTATGATAACT---GAATTATTTAGGGGCA-----------TAAATATTAA--TTTTTTTAACTA i otoGar3.GL873528 N 0 C 0 s mm10.chr16 78087875 99 + 98207768 atatatatatatataATTGATAACTCCAATAAAATTTCTTTTGGAGGAAAA-TGGTCTACGGGCTAATTAAGGAAATATAT---------------------ATATTAG--TTTTCTAGATTA i mm10.chr16 C 0 C 0 s canFam3.chr31 13777794 106 + 39895921 ACAAAAAT----GTAACTGAAATATTAAAATAAATTCCTGTAGAAGAAAAA-TATTCTGTAAGCCAAGT---GAATTATTTGGATTTACT-------AGTAAATATCAA--TTCTTTTGACTA i canFam3.chr31 C 0 C 0 a score=647248.000000 s hg38.chr21_KI270874v1_alt 11159 68 + 166743 ACTGTTACTCTAACTATTGTAGCTCACATATTACAAT---AATTTCTGGCTGCTTTTAAACT------------------ACA----------TATATG s panTro5.chr21 3627515 68 + 33445071 ACTGTTACTCTAACTATTGTAGCTCACATATTACAAT---AATTTCTGGCTGCTTTTAAACT------------------ACA----------TATATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262804 67 + 46275980 ACTGTTACTCTAACTATTGTAGCTCACATATTACAAT---AATTTCTGGCTGCTTTTAAACT-------------------CA----------TATATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201478 68 - 13858734 ACTGTTACTCTAACTATTGTAGCTCACATATTACAAT---AATTTCTGGCTGCTTTTAAACT------------------ACA----------TATATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389558 62 + 32716333 ------ACTCTAACTATTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAAACT------------------ACA----------TATATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344859 68 - 185818997 ACTCTTACTCTAACTACTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAAACT------------------ACA----------TATATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167559 68 - 192294377 ACTCTTACTCTAACTACTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAAACT------------------ACA----------TATATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645574 68 + 9440265 ACTCTTACTCTAACTACTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAAACT------------------ACA----------TATATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376626 68 + 21915920 ACTCTTACTCTAACTATTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAAACT------------------ACA----------TATATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953033 77 - 90373283 ACTCTTTCTCTAACTATTGTAGCTCACAAATTACAAT---AATATCTGACTGCTTTTAA-CT------------------ATGATCATATGATTATATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118341 68 + 4234846 ACTCTTACTCTAACTATTGTAGCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAAGCT------------------ACA----------TATATG i manLeu1.NW_012102865v1 I 816 C 0 s colAng1.NW_012120598v1 124480 73 - 13750039 ACTCTTACT----CTATTATAGCTCACAAATTATAAT---AATTTCTGACtgcttttaa-tt------------------atgattatatgattatatg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21879505 66 + 50472720 ACTC--AATTTAATTATTGTATCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAGACA------------------ATA----------TATATG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4990333 68 + 13128814 ACTCTGACTCTAGTTATTGTATCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAGACA------------------ATA----------TATATG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9564859 68 - 14377064 ACTCTGACTCTAATTATTGTATCTCACAAATGACAGT---AATTTCTGGCTGCTTTTAGACA------------------ATA----------TATGAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8688188 68 + 9889416 ACTCTGACTCTAATTATTGTATCTCACAAATTACAAT---AATTTCTGGCTGCTTTTAGACA------------------ATA----------TATATG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20715918 82 - 38779656 ACTCCTACT----CTATTATAGCTTACAAAGCAGAAT---AAATTCCTGTGCCTTGAACACATATAAATATCACACCCACACA----------TACGTG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78087974 67 + 98207768 AGTCCTAGT----CTGTTATAGTTTTAAAATAACAATAACAATAACTACTTGCTTCTAAAAT------------------ATA----------AATGTA i mm10.chr16 C 0 C 0 s canFam3.chr31 13777900 64 + 39895921 ACCCCTGCT----CTACTATAGCTGACAAATTATAAT---ACCCTCTTACCACTTTTAAAAT------------------ACA----------TGTGTG i canFam3.chr31 C 0 I 234 a score=124597.000000 s hg38.chr21_KI270874v1_alt 11227 12 + 166743 ATTCTGATAGAA s panTro5.chr21 3627583 12 + 33445071 ATTCTGATAGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262871 12 + 46275980 ATTCTGATAGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201546 12 - 13858734 ATTCTGATAGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389620 12 + 32716333 ATTCTGATAGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344927 12 - 185818997 ATTCTGATAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167627 12 - 192294377 ATTCTGATAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645642 12 + 9440265 ATTCTGATAGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376694 12 + 21915920 ATTCTGATAGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953110 12 - 90373283 ATTCTGATAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118409 12 + 4234846 ATTCTGATAGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124553 9 - 13750039 attctgat---A i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21879571 12 + 50472720 ATTCTAATGGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4990401 12 + 13128814 ATTCTAATAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9564927 12 - 14377064 ATTCTAATAGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8688256 12 + 9889416 ATTCTAATAGAA i aotNan1.NW_018487195v1 C 0 I 306 s otoGar3.GL873528 20716000 12 - 38779656 ATTTCAGTGAAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78088041 12 + 98207768 CTTCCAATCAAA i mm10.chr16 C 0 C 0 e canFam3.chr31 13777964 234 + 39895921 I a score=26097.000000 s hg38.chr21_KI270874v1_alt 11239 3 + 166743 GGA s panTro5.chr21 3627595 3 + 33445071 GGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262883 3 + 46275980 GGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201558 3 - 13858734 GGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389632 3 + 32716333 GGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344939 3 - 185818997 GGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167639 3 - 192294377 GGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645654 3 + 9440265 GGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376706 3 + 21915920 GGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953122 3 - 90373283 GGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118421 3 + 4234846 GGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124562 3 - 13750039 GGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21879583 3 + 50472720 AAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4990413 3 + 13128814 AAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9564939 3 - 14377064 AAA i cebCap1.NW_016107322v1 C 0 I 302 s otoGar3.GL873528 20716012 3 - 38779656 GAA i otoGar3.GL873528 C 0 I 5 s mm10.chr16 78088053 3 + 98207768 GAA i mm10.chr16 C 0 C 0 e aotNan1.NW_018487195v1 8688268 306 + 9889416 I e canFam3.chr31 13777964 234 + 39895921 I a score=107715.000000 s hg38.chr21_KI270874v1_alt 11242 9 + 166743 GAAACTTTC s panTro5.chr21 3627598 9 + 33445071 GAAACTTTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262886 9 + 46275980 GAAACTTTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201561 9 - 13858734 GAAAGTTTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389635 9 + 32716333 GAAACTTTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344942 9 - 185818997 GAAACTTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167642 9 - 192294377 GAAACTTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645657 9 + 9440265 GAAACTTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376709 9 + 21915920 GAAACTTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953125 9 - 90373283 GAAACTTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118424 9 + 4234846 GAAACTTTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124565 9 - 13750039 GAAACTTTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21879586 9 + 50472720 GAAACtttc i calJac3.chr21 C 0 I 301 s saiBol1.JH378168 4990416 9 + 13128814 GAAACTTCC i saiBol1.JH378168 C 0 I 298 s cebCap1.NW_016107322v1 9565244 9 - 14377064 GAAACTTTA i cebCap1.NW_016107322v1 I 302 C 0 s aotNan1.NW_018487195v1 8688574 9 + 9889416 GAAACTTTG i aotNan1.NW_018487195v1 I 306 C 0 s otoGar3.GL873528 20716020 9 - 38779656 GATACTTCC i otoGar3.GL873528 I 5 C 0 s mm10.chr16 78088056 9 + 98207768 GATACTTTC i mm10.chr16 C 0 C 0 e canFam3.chr31 13777964 234 + 39895921 I a score=60925.000000 s hg38.chr21_KI270874v1_alt 11251 5 + 166743 TGACA s panTro5.chr21 3627607 5 + 33445071 TGACA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262895 5 + 46275980 TGACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201570 5 - 13858734 TGACA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389644 5 + 32716333 TGACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344951 5 - 185818997 TAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167651 5 - 192294377 TAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645666 5 + 9440265 TAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376718 5 + 21915920 TAACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953134 5 - 90373283 TAACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118433 5 + 4234846 TAACA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124574 5 - 13750039 TAACA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21879896 5 + 50472720 TAACA i calJac3.chr21 I 301 C 0 s saiBol1.JH378168 4990723 5 + 13128814 TAACA i saiBol1.JH378168 I 298 C 0 s cebCap1.NW_016107322v1 9565253 5 - 14377064 TAACA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8688583 5 + 9889416 TAACA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20716029 5 - 38779656 TAATA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78088065 5 + 98207768 TAACA i mm10.chr16 C 0 I 14 e canFam3.chr31 13777964 234 + 39895921 I a score=2268254.000000 s hg38.chr21_KI270874v1_alt 11256 250 + 166743 TAAATAcaggttacccttaagcaacatgggttttaactgggtgcgtccaattagacatgga-attttttttcaaccaaacacagatggaaaatacagccttcgtgggatgtaaaacctgcgcatac----agaaagccaaatttttatatatacagattccacagggccaagtgtgaggcttcaccatgcataggtttgggtatttgtggacgtcctggtaccactgccctgcgtatact---gaaggtcgactgTAC-- s panTro5.chr21 3627612 250 + 33445071 TAAATAcaggttacccttaagcaacatgggttttaactgggtgcgtccaattagacacgga-attttttttcaaccaaacacagatggaaaatacagccttcatgggatgtaaaacctgcgcatac----agaaagccacctttttatatatacagattccacagggccaagtgagaggcttcaccatgcataggtttgggtatttgtggacgtcctggtaccactgccctgcgtatact---gaaggtcaactgTAC-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17262900 250 + 46275980 TAAATAcaggttacccttaagcaacatgggttttaactgggtgcgtccaattagacacgga-attttttttcaaccaaacacagatggaaaatacagccttcgtgggatgtaaaacctgcgcatac----agaaagccacctttttatatatacagattccacagggccaagtgagaggcttcaccatgcataggtttgggtatttgtggacgtcctggtaccactgccctgcgtatact---gaaggtcaactgTAC-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201575 250 - 13858734 TAAATAcaggtgacccttaagcaacatgggttttaactgggtgcgtccaattagacacgga-attttttttcaaccaaacacagatggaaaatacagccttcgtgggatgtagaacctgcgcatac----agaaagccaactttttatatatacagattctacagggccaagtgtgagacttcaccatgcataggtttgggtatttgtggatgtcctggtaccactgccctgcgtatact---gagggtcgactgTAC-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389649 249 + 32716333 TAAATAcagatgacccttgagcaacatgggttttaactgcatgcgtccaattagacacgg--attttttttcaagcaaacacagatggaaaatacagccatcctgggatgtaaaacctgcgcatac----agaaagccaactttttatatacacagattccacagggccaagtgtgagacttcaccatgcatagatttgggtatttgtggacgtcctggtaccaccgccccgtgtatact---gagggtcgactgTAC-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155344956 248 - 185818997 TAAATAGagatgacccttgagcaacatgta-tttgactgcacacgtccaattagacatgga--ttttttttcaaccaaatacagattgcacatacagccttcctggggtgtaaaacctgcacatct----ggaaagccaactttttctatacacagattccacagggccaagtgtgagacttcaccatgtataggtttgggtctacgtggaagtcctggtaccactgccccgcccgtact---gagggtcgagtgTAC-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167656 251 - 192294377 TAAATAGagatgacccttgagcaacatgta-tttaactgcacacgtccaattagacatgga-tttttttttcaaccaaatacagattgcacatacagccttcctggggtgtaaaacctgcacatct----ggaaagccaactttttctatacacagattccatagggccaagtgtgagacttcaccatgtataggtttgggtctacgtggaagtcctggtaccactgccccgcccgtact---gagggtcgagtgTACTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645671 250 + 9440265 TAAATAGagatgacccttgagcaacatgta-tttaactgcacacgtccaattagacatggattttttttttcaaccaaatacagattgcacatacagccttcctggggtgtaaaacctgcacatct----ggaaagccaactttttctatacacagattccacagggccaagtgtgagacttcaccatgtataggtttgggtctacgtggaagtcctggtaccactgccccgcccgtact---gagggtcgagtgTAC-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376723 250 + 21915920 TAAATAGagatgacccttgagcaacatggg-tttaactgcacatatccaattagacatggattttttttttcaaccaaacacagatcgcaaatacagccttcctggggtgtaaaacctgcacatct----ggaaagccaactttttctatacacagattccacagggccaagtgtgagacttcaccatgtataggtttgggtctacgtggaagtcctggtaccactgccccgcctgtact---gagggtcgagtgTAC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953139 249 - 90373283 TATATAGagatgacccttgagcaacatggg-tttaactgcacacatccaattagacacgga-tttttttttcaaccaaacacagattgcaaatacagccttcctggggtgtaaaacctgcacatct----ggaaagccaactttttctatacacaaattccacatggtcaagtgtgagacttcaccaggtataggtttgggtatacgtggaagtcctggtaccactgcccctcctatact---gagggtcgagtgTAC-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118438 248 + 4234846 TAAATAGagatgacccttgagcaacatggg-tttaactgcacacatccaattagacatgga-ttttttttt-aaccaaacacagatcgcaaatacagccttcctggggtgtaaaacctgcacatct----ggaaagccaactttttctatacacagattccacagggccaagtgtgagacttcaccatgtataggtttgggtctacgtggaagtcctggtaccactgccccgcctgtact---gagggtcgagtgTAC-- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124579 248 - 13750039 TATATAGagatgacccttgagcaacatggg-tttaactgcacgcgtccaattagacacgga--ttttttttcagccaaacacagattgcaaatacagccttcctggtgtgtaaaacctgcacatat----ggaaagccaactttttcaatacacagattccacaaggtcaagtgtgagacttcaccatgtataggtttgggtatacgtggaagtcctggtaccactgccccgcctatact---gacggtcaagtgTAC-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21879901 252 + 50472720 TAAATATagatgacccttgagcaacatgggttttaactgcatgtgtccaaatagacatgaa---tttttttcaatcaaacacagattgaaaatatgatcttcctgggatgtaaaacctgtacatatttccatattcccaactttttacatacacatattccacacggccaagtgtgggacttcaccaggcatcagtttgggtatacacggaagtcctggtaccaccgccctgtatatacc---gagggtcgactATAC-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4990728 248 + 13128814 TAAATATagatgacccttgagcaacatgggttttaactgcatgcatccaattagacctgaa---tttttttcaatcaaacacagattgaaaatatgaccttcctgagatgtaaaacctgtacatat----ggaagcccaactttttatatacacagattccacagggccaagtgtggggcttcaccaggcataggtttgggtatacatggaagtcctggtaccactgccctgtatatacc---aagggtcaactgTAC-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9565258 248 - 14377064 TAAATATagatgacccttgagcaacatgggttttaactgcatgcatccaattagacatgaa---tttttttcaatcaaacacagattgaaaatatgaccttgctgggatgtaaaacctgtacatat----ggaagcccaactttttatatacacagattccacagagccaagtgtgggacttcaccaggcatagctttgggtatacgtggaagtcctggtaccactgccctgtatatacc---gagggtcgactgTAG-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8688588 248 + 9889416 TAAATATagatgacccttgagcaacatgggttttaactgcatgcatccaattagacatgaa---tttttttcagtcaaacacagattgaaaatatgaccctcctggaatgtaaaacctgtatatat----ggaagtccaactttttatgtacacagattccacagggccaagtgtgggacttcaccaggcataggtttggctatacacggaagtcctggtaccactgccctgtatatacc---gagggtcaactgTAC-- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20716034 226 - 38779656 TAAACAcaactgacccttgaattacatgggtatgaattgcaagggtccacttagatagaga---tttctatcaaccacacatggatcaaaaataaagcattcatgagatatgaaactgtcacaggc----agaggacc---ttttcatctacatgggttc------------tgtgggacttggccaggcatgaatttagg----------ggtctcagaacgaatctaccacatgtgccagggagggacagctgTCC-- i otoGar3.GL873528 C 0 C 0 e canFam3.chr31 13777964 234 + 39895921 I e mm10.chr16 78088070 14 + 98207768 I a score=99102.000000 s hg38.chr21_KI270874v1_alt 11506 9 + 166743 TATGCATGA s panTro5.chr21 3627862 9 + 33445071 TATGCATGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17263150 9 + 46275980 TATGCATGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201825 9 - 13858734 TATGCATGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389898 7 + 32716333 TA--CACGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155345204 9 - 185818997 TATGCATGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167907 9 - 192294377 TATGCATGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645921 9 + 9440265 TATGCATAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376973 9 + 21915920 TATGCATGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953388 9 - 90373283 TATGCATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118686 9 + 4234846 TATGCATGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124827 9 - 13750039 TATGCATGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21880153 9 + 50472720 TATGCATGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4990976 9 + 13128814 TATGCAGGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9565506 9 - 14377064 TATGCGTGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8688836 9 + 9889416 TATGCATGA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20716260 9 - 38779656 TATACATGA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13778198 9 + 39895921 TATACTTGG i canFam3.chr31 I 234 C 0 e mm10.chr16 78088070 14 + 98207768 I a score=359436.000000 s hg38.chr21_KI270874v1_alt 11515 36 + 166743 GAGACTTCCACTTTAAAATGGCA-----------TCTGGTG------------------ATATCC s panTro5.chr21 3627871 36 + 33445071 GAGACTTCCACTTTAAAATGGCA-----------TCCGGTG------------------ATATCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17263159 36 + 46275980 GAGACTTCCACTTTAAAATGGCA-----------TCTGGTG------------------ATATCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201834 36 - 13858734 GAGACTTCCACATTAAAATGGCA-----------TCTGGTG------------------ATATCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389905 36 + 32716333 GAGACTTCTACTTTAAAATGGCA-----------TCTAGTG------------------ATATTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155345213 36 - 185818997 GAGATTTCTGCCTTAAAATGGCA-----------TCTGATG------------------ATTCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167916 36 - 192294377 GAGATTTCTGCCTTAAAATGGCA-----------TCTAATG------------------ATTCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645930 36 + 9440265 GAGATTTCTGCCTTAAAATGGCA-----------TCTAATG------------------ATTCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8376982 36 + 21915920 GAGATTTCTGCCTTAAAATGGCA-----------TCTAATG------------------ATTCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953397 36 - 90373283 GAGACTTCTACTTTAAAATGGCA-----------TCTAATG------------------ATTTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118695 36 + 4234846 GAGATTTCTGCCTTAAAATGGCA-----------TCTAATG------------------ATTCCC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124836 36 - 13750039 GAGACTTCTACTTTAAAATGGCA-----------TCTAATG------------------ATTCCC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21880162 36 + 50472720 GAGACTCCTACTTTTAAATGGCA-----------TCTACAG------------------ATTTTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4990985 36 + 13128814 GAGACTCCTACTTTAAAATGGCA-----------TCTAGTG------------------ATTTCC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9565515 36 - 14377064 GAGACTCCTACTTTTAAATGGCA-----------TCTAGTG------------------ATTTCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8688845 36 + 9889416 GAGACTCCTACTTTAAAATGGCA-----------TCTAGTG------------------ATTTCC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20716269 54 - 38779656 AAGATGTCCTGTTTAAAATAACA-----------CCCAGTGAACAAAACTTGATACACTATTTCT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78088084 50 + 98207768 GAGATTTTCAGTTTAAAATGACAGTTTAGCAAAGTCTGATGAAC---------------ATTCCT i mm10.chr16 I 14 C 0 s canFam3.chr31 13778207 54 + 39895921 AAGGcttccagtttaaaacagca-----------tccagttaacagactttgatgcaacatttct i canFam3.chr31 C 0 C 0 a score=3221847.000000 s hg38.chr21_KI270874v1_alt 11551 271 + 166743 AAATTCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTA-CAATGCTACAAAAATTTGGTCTGCAAGAATGTATTTACTTACTTACCTAAGGAAACCAAA---TTGAAAAATGAAATAAG-----------TAGCC--TTCCATGCCCTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAAAC--T-TCACCCAAGTGCCATGGGAAACAGCACAGGACAACAGCTAAG----AGTAAAGACTCTGGAGTGAGGCTGTGCTTGTAAGCATGAATCAGGTGCA s panTro5.chr21 3627907 271 + 33445071 AAATTCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTA-CAATGCTACAAAAATTTGGTCTGCAAGAATGTATTTACTTACTTACCTAAGGAAACCAAA---TTGAAAAATGAAATAAG-----------TAGCC--TTCCATGCCCTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAAAC--T-TCACCCAAGTGCCGTGGGAAACAGCACAGGACAACAGCTAAG----AGTAAAGACTCTGGAGTGAGGCTGTGCTTGTAAGCATGAATCAGGTGCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17263195 271 + 46275980 AAATTCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTA-CAATGCTACAAAAATTTGGTCTGCAAGAATGTATTTACTTACTTACCTAAGAAAACCAAA---TTGAAAAATGAAATAAG-----------TAGAC--TTCCATGCCCTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAAAC--T-TCACCCAAGTGCCGTGGGAAACAGCACAGGACAACAGCTAAG----AGTAAAGACTCTGGAGTGAGGCTGTGCTTGTAAGCATGAATCAGGTGCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3201870 271 - 13858734 AAATTCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTA-CAATGCTACAAAAATTTGGTCTGCAAGAATGTATTTACTTACTTACCTAAGGAAACCAAA---TTGAAAAATGAAATAAG-----------TAGCC--TTCCATGCCCTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAAAC--T-TCACCCAAGTGCCATGGGAAACAGCACAAGACAACAGCTAAG----AGTAAAGACTCTGGAGTGAGGCTGTGCTTGTAAGCATGAATCAGGTGCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4389941 269 + 32716333 AAATTCCTCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTA-TAATGCTACAAAAATTTTGTCTGCAAGAATGTATTTACTTACTTACCTAAGGAAACCAAA---TTGAAAAATGACATGAG-----------TAGCC--TTCCATGCCCTATTTGCCTG-AAAACATGTCTTT------GG--------TTCTCCT-TAAAC--T-TCACCCCAGTGCCATGGGAAacagcacaggacaacagctaag----agtaaagactctggagtgaggctgt--ttgTACGTATGAATCAGGTGCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155345249 267 - 185818997 AAATTCCCCACAAAAGCATTTGTAAATACTCTGGAAA-ATGCAAAAATGTA-TAATGCTACAAAAATTTGGTCTGCACAAATGTATTTACTTAC----CTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------TAGCC--CTCCATGCAGTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAGAC--C-TCACCCAAGTGCCATGGGAAATAGCACAGGGGAACGGCTAAG----AGCAAAGACCCTGGAGTAAGGCTGTGCTCGTAAGTATGAATCAGATGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162167952 267 - 192294377 AAATTCCCCACAAAAGCATTTGTAAATACTCTGGAAA-ATGCAAAAATGTA-TAATGCTACAAAAATTTGGTCCGCACAAATGTATTTACTTAC----CTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------TAGCC--CTCCATGCAGTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAGAC--C-TCACCCAAGTGCCATGGGAAATAGCACAGGGGAACGGCTAAG----AGCAAAGACCCTGGAGTAAGGCTGTGCTCGTAAGTATGAATCAGATGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8645966 267 + 9440265 AAATTCCCCACAAAAGCATTTGTAAATACTCTGGAAA-ATGCAAAAATGTA-TAATGCTACAAAAATTTGGTCTGCACAAATGTATTTACTTAC----CTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------TAGCC--CTCCATGCAGTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAGAC--C-TCACCCAAGTGCCATGGGAAATAGCACAGGGGAACGGCTAAG----AGCAAAGACCCTGGAGTAAGGCTGTGCTCGTAAGTATGAATCAGATGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8377018 272 + 21915920 AAATTCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTATTAATGCTACAAAAATTTGGTCTGCATGAATGTATTTACTTACTTATCTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------TAGCC--CTCTATGCAGTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAGAC--C-TCACCCAAGTGCCATGGGAAATAGCACAGGAGAACGGCTAAC----AGCAAAGACCCTGGAGTAAGGCTGTGCTCGTAAGTATGAATCAGATGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953433 245 - 90373283 GAATTCCCCACAAAAACCTTTGTAAATACTCTGAAAA-ATGCAAAAATGTA-TAATGCTACAAAAATTTGGTCTGCATGAATGTGTTTACTTAC----CTAAGGAAACCAAA---TTGAAAAATGAAATGA-----------------------------------CCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAGAC--C-TCACCCAAGTGCCATGGGAAATAGCACAGGAGAACGGCTAAG----AGCAAAGACCCTGGAGTAAGGCTGTGCTTGTAAGTATGAACCAGATGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2118731 271 + 4234846 AAATTCCCCACAAAAACATTTGTAAATACTCTGGAAA-ATGCAAAAATATA-TAATGCTACAAAAATTTGGTCTGCATGAATGTATTTACTTACTTATCTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------TAGCC--CTTCATGCAGTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAGAC--C-TCACCCAAGTGCCATGGGAAATAGCACAGGAGAACGGCTAAC----AGCAAAGACCCTGGAGTAAGGCTGTGCTCGTAAGTATGAATCAGATGCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 124872 267 - 13750039 AAATCCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATGCAAAAATGTA-TAATGCTACAAAAATTTGGTCTGCACAAATGTATTTACTTAC----CTAAGGAAACCAAA---TTGAAAAATGAAATGAG-----------TAGCC--CTCCATGCAGTATTTGCCTG-AAAATATGTCTTT------GG--------TTCTCCT-CAGAC--C-TCACCCAAGTGCCATGGGAAATAGCACAGGAGAACGGCTAAG----GGCAAAGACCCTGGAGTGAGGCTGTGCTCGTAAGTATGAATCAGATGCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21880198 267 + 50472720 AAATTCCCTGCAAAAGCATTTGTAAATACTCTGTAAA-ATACAAAAATGTA-TAATGCAACAAAAATTTGGTCTGCAAAAA-----TTACTTAT----CTAAGAAAATCAAATTTTTAAAAAATGAAATAAG-----------TAGCT--CTCCATGCCATATTTGCCTGAAAAATATGTCTTT------TG--------TTCTCCTCCAAAC--C-TCACTCAAGTGCCATGGGAAACAGCACAGGACAACGATGAAG----AGTAAAGACTCTGGAATGAGGCTGTGCTTGTAAGTATGGATCAGGTGCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4991021 265 + 13128814 AAATTCCCCACAAAAGCATTTGTAAATACTCTGAAAA-ATACAAAAATGTA-TAATGCAACAAAAATTTGGTCTGCAAGAG-----TTAC-TAT----CTAAGGAAATCAAATTTTTAAAAAATGAAATGAG-----------CAGCT--CTCCATGCCATATTTGCCTG-AAAATATGTCTTT------TG--------TTCTCCTCCAAAC--C-TCACTCAAATGCCACGGGAAACAGCACAGGACAACGATGAAG----AGTAAAAACTCTGGAGTGAGGCTGTGCTTGTAAGTATGAATCAGGTGCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9565551 265 - 14377064 AAATTCCCCGCAAAAGCATTTGTAAATACTCTGAAAA-ATACAAAAATGTA-TACTGCAAGAAAAATTTGGTCTGCAAGAA-----TTACTTAT----CTAAGGAAATCAAATTTTTAAAAAATGAAATGAG-----------TAGCT--CTCCATGCCATATTTGCCTG-AAAATATGTC--T------TG--------TTCTCCTCCATAC--CTTCACTCAAGTGCCATGGGAAACAGCACAGGACAACGATGAAG----AGTAAAGACTCTGGAGTGAGGCTATGCTTGTAAGTATGAATCAGGTGCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8688881 266 + 9889416 AAATTCCCCGCAAAAGCATTTGTAAATACTCTGAAAA-ATACAAAAATGTA-TAATGCGACAGAAATTTGGTCTGCAGGAA-----TTACTTAT----CTAAAGAAATCAAATTTTTAAAAAATGAAATGAG-----------TAGCT--CTCCATGCCATATTTGCCTG-AAAATATGTCTTT------TG--------TTCTCCTCCAAAC--C-TCACTCAAGTGCCATGGGAAACAGCACAGGACAACGATGAAG----AGTAAAGACTCTGGAGTGAGGCTGTGCTTGTAAGTATGAATCAGGTGCA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19152618 266 + 47401472 aaatttcccacaacagtatttgcaaatactctgagaa-atgcaaaaattta-taaTCCTACAAAAATGTGGTCTACAAGAATTTGTTTACTTAT-----TAATGGAACCAGA---TTGGAAAATGAAATGAA-----------TAGTC--CTCCATGCCATATCTACCTG-AAAATATGTCTTT------TG--------TTCTCCC-CAAAC--T-TCGTCCAAGTGCTATGGGAGGCAGCACAGCACAACAGCTAAG----AGTACATGCTCTGGAGTGAAGCTATGCCTGTGAGATTGGCTCAAGTGTA i micMur3.chr31 N 0 C 0 s otoGar3.GL873528 20716323 276 - 38779656 CAATTTCCCACAACAGCATTTGCAAATGTTCTGAAAA-ATGCAAAAAATTT-TAATGCTATAAAAACATGGTCTGCAAGAATTTATTTACTTAT-----TAAGGGAACCAGA---TTGAAAAATGAAATGAA-----------CAGCC--CTCCATGCCATATCTACCTG-AAAATAGGCATTTTACATGTA--------TTCTCCT-CAAAC--T-TCATGCAAGTGCTATAGGAGGCAGCATGGCCCAGTCGCTAAGGGTAAGTAAGTGCTCTGGAGTGAGGCTGTTCTTGTAAGATTGGCTCAGGTGCT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78088134 270 + 98207768 GAATTTTCTATGAATATCTTTGCAAATCCCCTAAAAAGATGTGACTATTTA-TAACATACCAAAAATCC--CCTACAAAAAGTCACTTCCTCAT-----TAAGGGACTCAAA---TTTAAAAagagagagagagagagagagagagCCATTTCTGTGCCATATCTTCCTA-GAAATATGCCTTT------GGATCCACCTTTCCACT-TGAACATT-TTAGGTCAGTGCCATGGGCAGAGGCACAGCACAGTGGCCAAG----TGCAAAGAC---------GGTCTGGATTTATA---------CAGTCACA i mm10.chr16 C 0 C 0 s canFam3.chr31 13778261 259 + 39895921 aaatttcccacatatatatctgtaagtagcctgaaaa-aTGCAAGAA--CA-TAATGCTACAAAAATTTGGTCTGCAAGAATTTACTTAGTTAC-----TTAGAGAGCTAAA---TTGAGAAAGGAAA-GAG-----------TAGCC--CTCCATGCCATATCTGCCTG-AGAATATGTCTTT------AG--------TTCCAC--CAAAG--T-TCAACCAAGTATCAAGGAAAGCAAAACAGTGCAATGGCT--G----AGTAAGTACTCTTGAGTGAGGCAGTGCTTGTAAGGTTAGACCAAG-ACA i canFam3.chr31 C 0 C 0 a score=8590008.000000 s hg38.chr21_KI270874v1_alt 11822 572 + 166743 TTCGAGGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACACCAATGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGAGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATATGGAAACAAATGACACAT-----ATTGT----CTGGCTAACCAAAACCCAAAAGTTAAAAACAAAATATACATCTTTAAGGGTTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAATGTAGATCATTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGCAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGAATACATGTGTGTTCCTCAAATGG------TAGACCATGAAATGACTGAGCTAATGAGTAAA s panTro5.chr21 3628178 572 + 33445071 TTCGAGGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACACCAATGATACTA-TTTTTACAG--------------------------------------------------------------------------------ACGGTTACAGAGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATATGGAAACAAATGACACAT-----ATTGT----CTGGCTAACCAAAAGCCAAAAGTTAAAAACAAAATATACATCTTTAAGGGTTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAATGTAGATCATTGTGAGGTGTCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGAATACATGTGTGTTCCTCAAATGG------TAGACCATGAAATGACTGAGCTAATGAGTAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17263466 572 + 46275980 TTCGAGGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACACCAATGATACTA-TTTTTACAG--------------------------------------------------------------------------------ACGGTTACAGAGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATATGGAAACAAATGACACAT-----ATTGT----CTGGCTAACCAAAAGACAAAAGTTAAAAACAAAATATACATCTTTAAGGGTTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAATGTAGATCATTGTGAGGTGTCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGAATACATGTGTGTTCCTCAAATGG------TAGACCATGAAATGACTGAGCTAATGAGTAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3202141 567 - 13858734 TTCGAGGTTGACATCCTGGTTTTATGGCAACTTGGTGC-------CCAATGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGAGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATATGGAAACAAATGACAGAT-----ATTGT----CTGGCTAACCAAAAGCCAAAAGTTAAAAACAAAATATACATCTTTAAGGGTTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAATGTAGATCATTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATGCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTACT--------ATCATATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGAATACATGTGTGTTCCTCAAATGG------TAGACCATGAAATGACTGAGCTAATGAGTAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4390210 572 + 32716333 TTCGAGGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACATCAATGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGAGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATATGGAAACAAATGACACAT-----ATTGT----CTGGCTAACCAAAAGCCAAAAGTTAAAACCAAAATATACATCTTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAACGTAGATCATTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGAATACATGTGTGTTCCTCAAATGG------TAGACCATGAAATGACTGAGCTAATGGGTAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155345516 574 - 185818997 TTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGCAAAAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATGTGGAAACAAATGACAAAT-----ATTGT----CTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGGTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------TTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCACATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGG------TAGCCCATGAAATGACTGAGCTAATGAGTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162168219 572 - 192294377 TTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATGTGGAAACAAATGACAAAT-----ATTGT----CTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGGTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTGGCAGTTAATTTGGATATATTAATCATAATCAACTCT-----------------------TTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCACATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGG------TAGCCCATGAAATGACTGAGCTAATGAGTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8646233 572 + 9440265 TTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATGTGGAAACAAATGACAAAT-----ATTGT----CTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGGTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAATTCT-----------------------TTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCACATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGG------TAGCCCATGAAATGACTGAGCTAATGAGTAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8377290 572 + 21915920 TTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGGGGAGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATGTGGAAACAAATGACAAAT-----ATTGT----CTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGGTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATTCATTAATCATAATCAACTCT-----------------------TTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGATGATGTTTGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCACATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGG------TAGCCCATGAAATGACTGAGCTAATGAGTAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14953678 572 - 90373283 TTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGCGC--AAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATGTGGAAACAAATGACAAAT-----ATTGT----CTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGTTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTAGAAGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------TTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCACATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGG------TAGACCATGAAATGACTGAACTCATGAGTAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2119002 572 + 4234846 TTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGGGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTCTACATGTGGAAACAAATGACAAAT-----ATTGT----CTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGGTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------TTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGACAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTTGTAT----CCCACAGAATGAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCACATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGG------TAGCCCATGAAATGACTGAGCTAATGAGTAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 125139 570 - 13750039 TTCGAAGTTGACATCCTGGTTTTATGGCAACTTGGTGC--AAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGGGGGAAGAAAAGAGAATTCATAGGC-TCTTGAATATTTTCTACATGTGGAAACAAATGACAAAT-----ATTGT----CTGGCTAACTAAAAGCCAAAAGTTAAAACCAAAATATACATGGTTAAGGATTAGAGAAAAGGAAACAGATACGAATAGCCTTAGGAACTCAAAATTAGAGGAACAATGTAGATCACTGTGAGGTGGCTTCTTTTTTAGCAGTTAATTTGGATACATTAATCATAATCAA--CT-----------------------TTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATCCCTTTGTGGGTTATGTTTGTAT----CCCACAGAATGAAGTTCAAATAGAACTTTTACTGAATTTTGCT--------ATCACATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGGATACATGTGTGTTCCTCAAATGG------TAGCCCATGAAATGACTGAGCTAATGAGTAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21880465 552 + 50472720 TTTGAAATTGACATCCTGGTTTTATAGCAACTTGGTGC--AAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGAGGGGAGAAAAGAGAATTTATAGGC-CCTTGAATATTTTGGACATATGGAAACAAATGACAAAC-----ATTGT----CTAGCTAACCA-------------AAAACCAAAATATATGTCTTTAAGGATTAGAGAAAAGGAAATCAA----AATGG---GAGGAATTCAAAATGGGAGGAACGATGTAGATCATTGTGAGGTGTTTTTTTTTCCAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTCATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAGCCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGAAT----CCCACAGAATTAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTGCCACACATCCCCCA-TTAATTCATTACTGCTAATAGAATACATATGTGTTCCTAAAATGG------TAGACCATGAAATGACTGAGCTAATGAGTAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4991286 567 + 13128814 TTTGAAACTGACATCCTGGTTTTGTAGCAACTTGGTGC--AAACAACAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGAGGGGAGAAAAGAGAATTCATAGGC-CCTTGAATATTTTGGACATATGGGAAAAAATGACAAAC-----ATTGT----CTGGCTAATCAAAAACCAAAAGTTAAAACCAAAATATATGTCTTTGAGGATTAGAGAAAAGGAAACAGA----AATAGCCTTAGGAATTCAAAATTGGAGGAACAATGTTGATCATTGTGAGGGGTTTCTTCTT-CAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATGAGAGTATTCCTTTGTGGGTTATGTTCGAAT----CCCACAGAATTAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTACCACACATCCCCCA-TTAATTCATTACTACTGATAGAATATATATGTGTTCCTAAAATGG------TAGACCATGAAATGACTGAGCTAATGAGTAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9565816 565 - 14377064 TTTGAAATTGACATCCTGGTTTTATAGCAACTTGGCGC--AAACACCAGTGATACTA-TTTTTACAG--------------------------------------------------------------------------------AAGGTTAGAGAGGGGAGAAAAGAGACTTTATAGGC-CCTTGAATATTTTAGGCATATGGAAACAAATGACAAAC-----ATTGT----CTGGCTAACCA-------AAAGTTAAAACCAAAATATATGTCTTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAAATCAAAATTCGAGGAACAATGTAGATCATTGTGAGGTGGTTTCTTTTTCAGCAGTTAATTTGGATACATTAATCATAATCAGCTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGGTTATGTTCGAAT----CCCACAGAATTAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTACCACACATCCCCCA-TTAATTCATTACTGCTGATAGAATACACATGTGTTCCTAAAATGG------TAGACCATGAAATGACTGAGCTAATGAATAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8689147 572 + 9889416 TTTGAAATTGACATCCTGGTTTTACAGCAACTTGGTGC--AAACACCAGTGATACTA-TTTTTACAA--------------------------------------------------------------------------------AAGGGTAGAGAGGGGAGAAAAGAGAATTTATAGGC-CCTTGAATATTTTGGACATACAGAAACAAATGACAAAC-----ATTGT----CTGGCTAACCAAAAACCAAAAGTTAAAACCAAAATATATGTCTTTAAGGATTAGAGAAAAGGAAACAGATAGGAATAGCCTTAGGAATTCAAAATTGGAGGAACAGTGTAGATCATTGTGAGGTGGTTTCTTTTTCAGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCAGTAGGCAAATTATTCTTCACTGTAGATCAGAGTATTCCTTTGTGGATTATGTTCGAAT----CCCACAGAATTAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTACCACACATCCCCCA-TTAATTCATTACTGCTAATAGAATACATATGTGTTCCTAAAATGG------TAGACCGTGAAATGACTGACCTAATGAGTAAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19152884 560 + 47401472 TTTCAAGTTGATGTCTTGGTTTTATGGCAACTTGCTGG--ATGGACAAGTAATATGG-TCTTTACAG--------------------------------------------------------------------------------AAGGTTAGAAAAGAG-----AGAGCATTTATAGCA-CCTTGAATATTTTCTACATATGGAAACAAATGACA--------ACCAT----CTCACTAACCAAAAACCAAAAGTTAAAAACCAAGTATATATCTTCAAGGATTAGAGAAAAGGGCACAGATACGTGTAGCCTTAGGAATTCAAAACTGGAGGAACAATGTAGATCATTATGAGGTGGCTTCCTTTTTGACAGTTAATTTGGATACA------GTAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCGGTACGCAAACTATTCTTCACTGTATATAAGAGTGTTCCTTTGTGGGTTATGTTGGTAG----CCTGCAGAATTAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------AGAATATTATGACACACCCCCCA-TAAATTCATTATTGTTAATAGAATACATATGTGTTCCTAAAATAGAACACATAAACCATAAAAT----GAGCTAATAAGTAAA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20716599 659 - 38779656 TTTGAAGTTGATGTCTTAGTTTTAAG-------ACTAG--TTATACCAATGTCATGA-TTTTTACAGTTTAGAGAGGAGAGAGAATTCACATGACCTTGAACAGTTTCTGCACATGGAAACTAGATATACCAATGTCATGATTTTTACAGTTTAGAGAGGAG-----AGAGAATTCACATGA-CCTTGAACAGTTTCTGCACATGGAAACAAATGACA--------ATCAT----CTCACTAGCCAAAAACCGATAATTAAAAACCAAGCACACATCCTCAAGGATTAGAAAAAAGGGCCCAGGTATGAGTAGCCTT-GGAATTCAGAACTGGAGAAACAGCACAGATCATTACGACGTAGTTTCCTTTTTGGCAGTTAGCTTGGATGCATGAATCATAATCAACTCTCTTTAATCAGAAATTGGGATTTCCTTTAATCAGAAATT-GGGATTTCCTGAGTAC-TTTTCATTAATTGTAAACCAGAGCCGTAGGCAAATTATTCCTCACTGTAGGTCAGAGTACTCCTCTGTGGGCTATGTTAGTAC----CCCACAGAATTAAGTTCAAGTAGAATTTTTACTGAATTTTGCT--------AGGATATTACCATGCATTCCCCAGTTAATTCA-TGTGGGTAATAGGATACATATGTGTTCCTAAAATAG------TAGACCCTGAAGTGACGGAGCTATCAAGCACA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78088404 540 + 98207768 TTC-------ATATCCGGGGTTCA-------------C--AGACAC--ATTATGCTA-ATTTTTGAG--------------------------------------------------------------------------------ATAATTAGAAAGG--AGAAAAGCAAATTATTGAGA-CCTTGAATAATTCCTACATCCAAAAATAAAGAACTGCC-----GTTGT----CCCAATAGCCAAAAGTCAAATTTTTACACACAAATGTGCATCATTAAGAATAAGAGAGGAGGGCACAG-----TGCAGCCTCCGCAGCCTGAG---GGAGGGGCAATGACGCTTGTTCTGAGGTGCATTCAATTTTAGTAGTTAATTTGG-CACATTAATCATAATCAACTCT-----------------------CCTTAATCAGAAATTGGGGGTTTCCTGGGGACTTTTTCTTTAATTGTAAACTAGAATAGTGTATAAATTATTCTTTACTGTAGATCACAGTACCTCTTTG-GGGTTGTGCTTCTATATACCCCTCCAAATTAAATTCAAATAGAACTGTTATCGAATCTTGCT--------ATTTTATTACCATGCGACACTTG-TTAATTAATTGCTGCTAATAGGATA----TGCATAACCTTAACGG------CATACCATGAAACAGCTAAGCTAACGAGCACA i mm10.chr16 C 0 I 189 s canFam3.chr31 13778520 564 + 39895921 TATGAAGTTGACACCCTGGATT-ATGCAAGCTTACTGA--AAACACCAGTTACACTATTTTTTAGAG--------------------------------------------------------------------------------AAGGATGGAAAAGAGAGAAAAGAAAATTCATATGG-CCTTGAATATTTTCTACAAGCAGAAACAAAGGACAATT-----GTTGT----CTTGCTAATCA--------AAGTTAAAAACCAAATATACATCTTTAAGAATTAAAGAAAAAAGCACAGATATGAATAGCCTTAGGAATTTAAAATTGAAGGAACAATGTAGATAATTATGAGGTGGCTTCCTTTTTGGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-GGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAGCGGTAGGCAAATTATTCTTCACTGTAGATCAGAGTACTCCTTTGTGGGTTATGTTCATAT----CCCACAGAATTAAGTTCAAATAGAATTTTTACTGAATTTTGCT--------ATCATATTACCACACATTCCCCA-TTATTTCATTATTGCTAATAGGAAACATATGTATCCTTAAAATGG------TATACCATGAAATGACTGAACTAATGAATAAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3522503 580 - 6883506 ttaaaaattGCCATTCTGATTCTATGGAAATTTTCCAA--AAACACC-GTGACACTA-TTTTCATTG--------------------------------------------------------------------------------AAGGATGAACAAGGGAGAAAATAGAATTCATTTCTACCTTGAA---TTTCTACCTGCAGAAAATAAGAACAATCCAATGATTGTAAGCCTTGCTAACCTAAAATCAAAAGTTAAAAACCAAAGATTCATCTTTAAGGATGAGAAAACAGAGCACAGACACAAGTAGCTTTAGAAATTTAAA-TTGGAGGAACAATGTAGATCATTATTAGG-----TTCCTTTTGGCAGTTAATTTGGATACATTAATCATAATCAACTCT-----------------------CTTTAATCAGAAATT-TGGATTTCCTGAGGAC-TTTTCATTAATTGCAAACCAGAACGGTAGACAAATTATTCTTTGTTGTAGATCACAGTACTCCTTTGTGGGTTATGTTCATAT----CCCACAGAATTAAGTTCAGATAGAAATTTTATAAAATTTTGCTATATTTGCATCATAGTACCACACATCCCCCA-TTAGTTCATTATTGCTAATAGGATATACATGTGTTCATAAAATGG------CATGCAATAAAATGACTGAGCTAATGAGTAAA i dasNov3.JH568778 N 0 C 0 a score=3808077.000000 s hg38.chr21_KI270874v1_alt 12394 242 + 166743 ACTGA--------------------GCTTCTACAGGTAT-----AGCTGGGAGCATGCAGGGGAATGGTA--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGTCAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGTAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA s panTro5.chr21 3628750 242 + 33445071 ACTGA--------------------GCTTCTACAGGTAT-----AGCTGGGAGCATGCAGGGGAATGGTA--TA-AGGGCTGTTGTTCTATTCAGCACAGAAACAGTTAAGTCAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGTAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17264038 242 + 46275980 ACTGA--------------------GCTTCTACAGGTAT-----AGCTGGGAGCATGCAGGGGAATGGTA--TA-AGGGCTGTTGTTCTATTCAGCACAGAAACAGTCAAGTCAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGTAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3202708 242 - 13858734 ACTGA--------------------GCTTCTACAGGTGT-----AGCTGGGAGCATGCAGGGGAATGGTA--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGTCAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGTAGTAGGGCTGTGTGCAGTCATTTGGGTAAAATTGAAAGTGCCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4390782 242 + 32716333 AGTGA--------------------GCTTCTACAGGTAT-----AGCTGGGAGCATGCAGGGGAATGGTA--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGTCAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TACATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155346090 242 - 185818997 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGCAGGGGAATGGTG--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCGAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATGAAATTGAAAGTGCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162168791 242 - 192294377 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGCAGGGGAATGGTG--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCGAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCGTAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATGAAATTGAAAGTGCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8646805 242 + 9440265 AGTGA--------------------GCTTCTACAAGTAC-----AGCTGGGAGCATGCAGGGGAATGGTG--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCGAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATGAAATTGAAAGTGCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8377862 242 + 21915920 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGCAGGGAAATGGTG--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCCAGCTTCATATTCT-CCTCTATTTTGCACTGCCTTTTAATGACATAAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATGAAATTGAAAGTGCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14954250 242 - 90373283 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGCAGGGGAATGGTG--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCGAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTAGATGAAATTGAAAGTGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2119574 242 + 4234846 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGCAGGGGAATGGTG--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCCAGCTTCATATTCT-CCTCTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATGAAATTGAAAGTGCCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 125709 241 - 13750039 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGCAGGGGAATGGTG--TA-AGGGCTGTTGTTCTATTCAGCACAGAAGCAGTTAAGCCAGCTTCATATTCT-TC-CTATTTTGCACTGGCTTTTAATGACATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21881017 242 + 50472720 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGTAGGGGAATAGTG--CA-AGAGCTGATGTTCTATTCAGCACAGAAGCAGTTAAGCCAGCTCCATATTCT-CCTCTATTTTCCACTGGATTTTAATGGCATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTGATTTGGATAAAATTGAAAATGCCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4991853 242 + 13128814 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGCAGGGGAATAACA--TA-AGGGCTGATGTTCTATTCAGCACAGAAGCAGTTAAGCCAGTTCCATATTCT-CCTCTATTTTCCACTGGATTTTAATAGCATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9566381 242 - 14377064 AGTGA--------------------GCTTCTACAGGTAC-----AGCTGGGAGCATGGAGGGGAATAGGG--TA-AGGGCTGATGTTCTATTCAGCACAGAAGCAGTTAAGCCAGCTCCATATTCT-CCTCTATTTTCCACTGGATTTTAATGGCATTAAGTCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8689719 242 + 9889416 AGTGA--------------------GCTTCTATAGGTAC-----AGCTGGGAGCATGTAGGGGAATAGTG--TA-TGGGCTGATGTTCTATTCAGCACAGAAGCAGTTAAGCCAGCTCCATATTCT-CCTCTATTTTCCACTGGATTTTAATGGCATTAAATCAAAT--TATATTTTCTTAGAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTCATAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19153444 251 + 47401472 AGGAT--------------------GCTTCAACAAGTATATAC-AGCTGGGAGCATATAGGTGAATGGTTATTA-AGTATTGATGTTTTATTCAGCACAGAAGCAGTTAAAAGAGCTCCATATTCTCCCTTTATTTTGCACTGGCTTCTAATGAAATTAAACCAAATTATATATTTCCTTATAAAA---TTTAATGTTTAGCTTTTCTAATTTTACCTTTGTAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20717258 248 - 38779656 AGTAT--------------------GCTTCAGCGGGGCGGGGTGGGGGGGGAGCGGGGTGGGGAGTGACTG-TG-AGGGCTGATCTTCTGTTCAGCACAGGAGCAGTTAAAACAGCTCCACGTTCT-CTTCTATTTTGCACTGGCTTCTAATGAAATTAAACTAAAT--TCTATTTCCCTTTAAGA---TTTAATGTTTAGCTTTTCTAATTTTACCTTGGTAATGAAATTGAAGTAGGGCTGTGTGCAGTCATTTGGATAAAACTGCAAGTGCCA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78089133 262 + 98207768 actgatgtcagacaaggtcatcctcACTTCCATGGGTGC-----ATGTTGGGGCACAGAACTGAATCGTT--TCTAGGTCTAATGTTCTACTCAGCACTCCAGCAGTTATGCCTGCCTCATAGTCT-TCCCTTCTCTGCAATGGATACTAGTCCCATTAA-TCTAAT--TAAAGTCCTTTATAAGA---TTTAATGGTCAGCCTTTCTAATGTTACCTTTGTAATGAAACTGAAGTAGGGTAGCATACGGTTGTTGTGATAACATCAAAAACGTCA i mm10.chr16 I 189 C 0 s canFam3.chr31 13779084 240 + 39895921 AGTGA--------------------GTCTCAACAGGTAC-----AGCTGGGAGCGTGTAGGTGAATGGTT--TA-AGGGCTGATGTTTTATTCAGCATGGAAGCAGTTAAGCCAGCTCCACGAT---TCTCTATTTTACACTGGCTTCTAATGACATTGAATCAAAT--TATATTTCTTTATAAGA---TTTAATGTTTAGCTTTTCTAATTTTACTTTTATAACGAAATTGAAGTAGGGCCGTGTGCAGTCATTTGGATAAAATTGAAAGTGCCA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3523083 242 - 6883506 TGTGA--------------------ACTTCAACAGGTAC-----AGCTGGAACCATGCAGGTGAATGGTT--TA-AGGGCTAATGTGTTATTCAGCATGGATGCAGTTAAGCCAGTTCCATATTCT----TTATTTTATACTGGCTTCTTATGACATTAAATCAAAC--TATATTTCTTTTTAAAATGTTTTTATGTTGAGCTTTTCTGACTTTACCTTTCTAGTGAAATTGAAGTAGGGCCATGTGCAGTTGTTTGGATAAAATTGAAAATGCTA i dasNov3.JH568778 C 0 I 438 a score=6730483.000000 s hg38.chr21_KI270874v1_alt 12636 508 + 166743 TCAGTTATACACTCTAAACGAAATAGCAGCCT-TTTT--GTTTAACTTTAGTTAATGGTCTTATAGTTTCACATAAAAACTTT----------------------CTACCTCCTCTGTTGGAATTTGACTACAAG----CTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAATTATTCAAATTA----AAATGTTTGCATTTGA--TGACACACAT--ATTTGAG-GAC-AATCG-CCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAATCACTTCTCACTTCCATTATGAACTTCTTAAAAACTCAGTAAGAGGAGCAGCCTTACG-----------CAGAGAAAGGCACCAGTGTGAAACTCACTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTC-TTAAGTTCTCCAAGGCTCTTGTTTCTTCAACTATGAGACTAAGTACCAA s panTro5.chr21 3628992 509 + 33445071 TCAGTTATACACTCTAAACGAAATAGCAGACT-TTTT--GTTTAACTTTAGTTAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTCTGTTGGAATTTGACTACAAG----CTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAATTATTCAAATTA----AAATGTTTGCATTTGA--TGACACACAT--ATTTGAG-GAC-AATCG-CCCAACTTTTTTAT-GTTTACATT---TAGTAACTCATATCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAATCACTTCTCACTTCCATTATGAACTTCTTAAAAACTCAGTAAGAGGAGCAGCCTTACA-----------CAGAGAAAGGCACCAGTGTGAAAGTCACTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGGCTCTTGTTTCTTCAACTATAAGACTAAGTACCAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17264280 509 + 46275980 TCAGTTATACACTCTAAACGAAATAGCAGACT-TTTT--GTTTAACTTTAGTTAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTCTGTTGGAATTTGACTACAAG----CTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAATTATTCAAATTA----AAATGTTTGCATTTGA--TGACACACAT--ATTTGAG-GAC-AATCG-CCCAACTTTTTTAT-GTTTACATT---TAGTAACTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAATCACTTCTCACTTCCATTATGAACTTCTTAAAAACTCAGTAAGAGGAGCAGCCTTACG-----------CAGAGAAAGGCACCAGTGTGAAAGTCACTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGGCTCTTGTTTCTTCAACTATAAGACTAAGTACCAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3202950 509 - 13858734 TCAGTTATACACTCTAAACGAAATAGCAGCCT-TTTT--GTTTAACTTTAGTTAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTCTGTTGGAATTTGACTACAAG----CTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAATTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATCTGAG-GAC-AATCG-CCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CACC--TTCACTGGTACAGTGGTTTCCAGAATCACTTCTCACTTCCATTATGAACTTCTTAAAAATTCAGTAAGAGGAGCAGCCTTACG-----------CAGAGAAAGGCACCAGTGTGAAAGTCACTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCAGACATCAttgcccaaattctttaagttctccaagcctcttgtttcttcaactataagactaagtaccaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4391024 509 + 32716333 ACAGTTATACACTCTAAACGAAATAGTAGCCT-TTTT--GTTTAACTTTAGTTAATGGTCTCACAGTTTCACATAAAAACTTT----------------------CTACCTCTTTTGTTGGAATTTGACTACAAG----CTTTGAAACTACAAGCAAAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAATTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTTGAG-GAC-AATCG-CCCACCTTTTTTAT-GTTGACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTATAGTGGTTTCCAGAATCACTTCTCACTTCCATCATGAACTTCTTAAAAACTCAGTGAGAGGAGCAGCCTTACA-----------CAGAGAAAGACACCAGTGTGAAAGTCACTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGCTTCTTGTTTCTTCAACTATAGGACTAAGTACCAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155346332 506 - 185818997 TCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCT--GTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTTTGTTGGAATTTGACTAAAAG----CTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAGTTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTCGAG-GAC-AATCG-CCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCA--Gagaggagcagccttgcg-----------cagagaaaggcaccagtgtgaaagtcagtgacc--------aaaatg-ttt-ttcagg---ttctgaagctactaagcagacatcattgcccaaattctttaa-ttctccaagcctcctgtttcttcaactataaGGTTAAGTACCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162169033 508 - 192294377 TCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCT--GTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTTTGTTGGAATTTGACTAAAAG----CTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAGTTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTCGAG-GAC-AATCG-CCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTCCTTAAAAACTCAGTGAGAGGAGCAGCCTTGCG-----------CAGAGAAAGGTACCAGTGTGAAAGTCAGTGATC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAA-TTCTCCAAGCCTCCTGTTTCTTCAACTATAAGGTTAAGTACCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8647047 508 + 9440265 TCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCT--GTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTTTGTTGGAATTTGACTAAAAG----CTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAGTTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTCGAG-GAC-AATCG-CCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCAGTGagaggagcagccttgca-----------cagagaaaggcaccagtgtgaaagtcagtgacc--------aaaatg-ttt-ttcagg---ttctgaagctactaagcagacatcattgcccaaattctttaa-ttctccaagcctcctgtttcttcaactataaGGTTAAGTATCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8378104 508 + 21915920 TCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCT--GTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTTTGTTGGAATTTGACTAAAAG----CTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAACTCCCACAAACAAAAGCTT-ATCTTAATGCAGTTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTCGAG-GAC-AATCG-CCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCAGTGagaggagcagccttgtg-----------cagagaaaggcaccagtgtgaaagtcagtgacc--------aaaatg-ttt-ttcagg---ttctgaagctactaagcagacatcattgcccaaattctttaa-ttctccaagcctcctatttcttcaactataaGGTTAAGTACCAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14954492 509 - 90373283 TCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCT--GTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTTTGTTGGAATTTGACTAAAAG----CTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAGTTATTAAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTTGAG-GAC-AATCG-CCCACCTCTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCAGTGAGAGGAGCAGCCTTGCG-----------CAGAGAAAGGCACCAGTGTGAAAGTCAGTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGCCTCTTGTTTCTTCAACTATAAGGTTAAGTACCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2119816 508 + 4234846 TCAGTTACACACTCTAAACAAAATAGCAGCCT-TTCT--GTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTTTGTTGGAATTTGACTAAAAG----CTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAGTTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTCGAG-GAC-AATCG-CCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CAGC--TTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCAGTGagaggagcagccttgcg-----------cagagaaaggcaccagtgtgaaagtcagtgacc--------aaaatg-ttt-ttcagg---ttctgaagctactaagcagacatcattgcccaaattctttaa-ttctccaagcctcctgtttcttcaactataaGGTTAAGTACCAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 125950 509 - 13750039 TCAGCTACACACTCTAAACAAAATAGCAGCCT-TTCT--GTTTAACTTTAGTAAATGGTCTCATAGTTTCACATAAAAACTTT----------------------CTACCTCTTTTGTTGGAATTTGACTAAAAG----CTTTGAAACTACAAGCACAGTTGCTTATCACAAATGGAGAATTCCCAGAAACAAAAGCTT-ATCTTAATGCAGTTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTTGAG-GAC-AATTG-CCCACCTTTTTTAT-GTTTACATT---TAGTAATTCATGTCCTTTCTGTTTCAAGG-CCAC--TTCACTGGTACAGTGGTTTCCAGAGTCACTTCTCACTGTCATCATGAACTTCTTAAAAACTCAGTGAGAGGAGCAGCCTTGCG-----------CAGAGAAAGGCACCAGTGTGAAAGTCAGTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCAGACATCATTGCCCAAATTCTTTAAGTTCTCCAAGCCTCTTGTTTCTTCAACTATAAGGTTAAGTACCAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21881259 504 + 50472720 TCAGCTATACACTCTAAACGAAATAGCAGCCT-TTTT--GTTTAACTTTTGTAAGTGGTCTCATACTTTCACATAAAAACTTT----------------------CTACTGCTTCTCTTGGAATTTGATTACTAG----CTTTGAAACTACAAGCAAAGTTGCTTATCAC-AATGGGGAAGTCCCAGAAACAAAAGTTT-ATCTTAATGCAATTTTTCAAATTA----AAATGTTTGTATTTAA--TGACACACAT--ATTTGAG-GAC-AATCG-CCAACATTTTTTATAATTTACATT---TAGTAATTTATGTA------ATTTCAAGG-CAGC--TTCCCTGGTACAGTGGTTTCCAGAATTACTTCTCACTTTCATCATGAACTTCTTAAAAACTCAGTGagaggagcagccttgca-----------caaagaaaggcaccagtgtgaaagtcagtgacc--------aaaatgtttt-ttcagg---ttctgaagctactaagcatacatcattactcaaattctttaaattctccaagtctcttgcttctgcaactataaggttaagtaacaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4992095 486 + 13128814 TCAGCTATACACTCTAAACAAAATAGCAGCCT-TTTT--GTTTAACTTTTGTAAGTGGTCTCATATTTTCACATAAAAACTTT----------------------CTACCACTTTTCTTGGAATTTGACTACAAG----CTTTGAAACTACAAGCAAAATTGTGTATCAC-AATGGAGAAGTCCCAGAAACAAAAGTTT-ATCTT--------------AATTA----AAATGTTTGTACTTGA--TGACACACAT--ATTTGAG-GAC-AATTG-CCCACATTTTTTATAATTTACATT---TAGTAATTCATGTA------ATTTCAAGG-CAGC--TTCCCTGGTACAGTGGTTTCCAGAATTGCTTCTCACTTTCATCAAGAACTTCTTAAAAACTCAGTGagaggagcagccttgca-----------caaagaaaggcaccagcgtgaaagtcagtgacc--------aaaatg-ttt-ttcagg---ttctgaagctactaagcata---cattacccaaattttttaaattatccaagcctcttgcttcttcaaatataaGGTTAAGTAGCAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9566623 503 - 14377064 TCAGCTACACACTCTAAACGAAATAGCAGCCT-TTTT--GTTTAACTTTTGTAAGTGGTCTCATATTTTCACATAAAAACTTT----------------------CTACCGCTTTTCTTAGAATTTGACTACAAG----CTTTGAAACTACAAGCAAAATTTCTTATCAC-AATGGAAAAGTCCCAGAAACAAAAGTTT-ATCTTAATGCAATTATTCAAATTA----AAATGTTTGCATTTGA--TGACACACCT--ATTTGAG-GAC-AATCG-CCTACATTTTTTATAATTTACATT---TAGTAATTCATGTA------ATTTCAAGG-CAGC--TTCCCTGGTACAGTGGTTTCCAGAATTACTTCTCACTTTCATCAAGAACTTCTTAAAAATTCAGTGAGAGTAGCAGCCTTGCA-----------CAAAGAAAGGCACCAGCGTGAAAGTCAGTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCATACATCATTACCCAAATTCTTTAAATCCTCCAAGCCCCTTGCTTCTTCAACTATAAGGTTAAGTAGCAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8689961 499 + 9889416 TCAGCTATACACTCTAAACGAAATAGCAACCT-TTTT--GTTTAACTTTTGTAAGTGGTCTCATATTTTCACATAAAAACTTT----------------------CTACCACTTTTCTTGGAATTTGACTACAAG----CTTTGAAACTACAAGCAAAATTGCTTCTCAC-AATGGGGAATTCCCAGAAACAAAAGTTT-ATCTAAATGCAATTATTCAAATTA----AAATGTTTGTATTTGA--TGACACACAT--ATTTGAA-GAC-AATCG-CCCACATTTTTCATAATTTACACT---TAGTAATTCATGTA------ATTTCAAGG-CAGC--TTCCCTGGTACAGTGGTTTCCAGAATTACTTCTCACTTTCATCACGAACTTCTTAAAAACTCAGTGAGAACA----CCTTGCA-----------CAAAGAAAGGCACCAGCATGAAAGTCAGTGACC--------AAAATG-TTT-TTCAGG---TTCTGAAGCTACTAAGCATACATCATTACCCAAATTCTTTAAATTCTCCAAGCCTCTTGCTTCTTCAACTATAAGATTAAGTAGCAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19153695 496 + 47401472 TCAGCTATACTCTCTAAACCAAATAGCAGCCT-TTTT--GTTTAACTTTAGTAAGTGCTCCAATAGCTTTATATGAAAACTTT----------------------CTACCTC--TTGTTGGAATTTGACCACAAG----TTTTGAAACTACAAATAAAATTGCTTATCCCAAGTGGAGAATTCCCAGAAACAAAAGTTTAATCTTACTGCAGTTATTCAAATTA----AAATGTTTATATTTGA--TAATATACAT--ATTTGAG-GAC-ACTTG-CCCATCCTTTTGAT-ATTTACATT---CAGTAATTCATGTCCTTTCTGTTTTAAGG-CAGC--TTCACTGGTACAATGTTTTTCAGAAG-ACTCCTCGCTTTCACCATAAACTTCTTGAATACTCAGTGAGAAGGGCAGCCTTGCA-----------CGGAGAAAGGC----------AAGTCAGTGACC--------AAAATC-TTT-TTCAGG---TTCTGAAGCCGCTAAGCACACATCATCATCTAAATCTGttaacttctccag-gcctctgtttcttcaactataaggttaagcagcaa i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20717506 491 - 38779656 TCAGCTACACTGTCTAAACTAAAGAGAGGCCT-TTCT--GTTTAACTTTACCATGTGGCCCAATAGTTTCATGAGAAAACTTT----------------------CCAACTCTTTTGTTAGAATTCGACCACAG------CTTGAAACTGCAAATGAAATTGCCTATC----ATAGGGAATTCTCAGAAAGAAAAGTTTAATTTTAATGCAGTTATTCAAATTA----AAATGTTTATATTTGA--TGATACACAT--ATTTGAG-GAC-ACCTGTCCCATCCTTTTGCT-ATTTACTTT---TAGTAATTCACATCCTTTCTGTTTGAAGG-CACCATTTCACTGGTATAATG-TTTCCAGAAG-ACGCCTCGC-TTCACTGTAAA---CTTGAATACTCAGTGAGAAGGGTAGTTTTGTA-----------CAGAGAAAGGCA--------AAAACCAGTAACC--------AAAATC-TTTCTTTGGG---TTCTGAAGCTGCTAAACTCA---CATCACCCAAGTCCTTTAACCTCTCCAGCATTTTCGCTTCTTAAATGATAACATTAAGTAGCAA i otoGar3.GL873528 C 0 I 902 s mm10.chr16 78089395 469 + 98207768 TCAGCGGTGCTCTCTACACTGAACAATAGTCC-TTCT--GCTTGA---------GTGATACCAGTATTTTAC------------------------------------TCCCGTTTATTCCAATTTGTCTAC-AG----TGTTGAACCTGTAAACGGA-------AACACAGATGGAGAATGTCCAAGCAAGAGAACGT-G-------GCAATTATTTGACCCAAGGCAAGTCTTTGGACTTAAAGTGGTCCGATT--GCCTTTA-GACTGACCG-GCCACTCTTCCCTT-ACCTATGCTTAGTAGTAATTGCTGTCGTTTCCGTTTCAAGGACATC--TT--GTGGTGATGTGATGTCCAGCATCTCTCTTCAGTCTCCTTGGTATTTTCTTGAAAACTCAGCGAGATGGG---------------------------AACTAACTGGTGTGAAATTCAAGGGCTAAAAAAAAAAAATC-TTT-TTCGAT---TTCTGAAGCCGC--AGCACATATCATTGTCAGGGTTC-CCAGGTTCCCTAGTGCCACTGTTTCTCTGACTGTAAGATGAAGCAGTGA i mm10.chr16 C 0 C 0 s canFam3.chr31 13779324 521 + 39895921 ACAGCTACGTTCTTTAAACTAAATAGCAGCCTCTTTT--GTTTAACTTTAGTAAGGGGTCCAATA-TCTTATGTGAAAATCTT----------------------CTACCTCTTTTGTTGGAATTTGACCAAAAG----CTTTGAAACTGCAAGTGAAAATGCTTATTATAAGTGGAGAATTCCCAGAAAGAAAAGTTTAATTATAATGCAATTATTTGAATTA--------GTGTGTGTTTGA--TTACATATATACATTTGGG-GAC-AATTA-CCAATCCCTTTGAT-ATCTACATT---TAGTCATTCATGTCTTTTCAGTTTAGAGG-CAGT--TTCACCAGGGTGGTGGTTTTCCGAATCACTCTTCACCTTCTCCACAAACATCTTGAAAACTTGGTGTGAGGGGCAGCCTcagagaagagcttttcagggaaaagcacta-catgggagtcattgacc--------aaaatc-tct-ttcagattcttctgactctgctaagcgtacatctttgtgcaagtcccgtaagctctccaggcctcttgtttcttcaaccataagattaactaacaa i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3523763 476 - 6883506 TCAACTATACTCTTT------AATAGCAGTCT-TTTTTGGTTTAACTGCAGTGAGCACTCCAATAGTTTTATATGAGAATGTTCTATCATTTTGTTGTTGCTGTGCTACCGTTTTTGTTGGCATTTGTCCAAAAGCTATCTTTGAAACTCCAGGCTAAATTGCTCATCACAAACAGAGAATTCCCAGAAAGAAATTTGTAATTCTAATACAATTACTCaaatta----taatatttttatttga--ttatataCAT--ATTTGAACAAC-AATTG-CCCACC-TTTTGAT-ATCTACCTT---TAGTAATTCATGCTCTTTTTGTTTTAAAG-CAAC--TTTACCAGTGAGGCAACTTCCAGAGTCACTCTCCAATTTCATCATGACCTTCTTGAAAACTTGGTTGGAGGGGCAATCTTGTA-----------CAA---------------TGGACATTGGTGACC--------AAAAGC-TTG-CCCAAG---TGCT----------------------------------TTAAA--CTTCTAGCCCCTTGATTCTTTGACtataaaattaagt----- i dasNov3.JH568778 I 438 C 0 a score=5853509.000000 s hg38.chr21_KI270874v1_alt 13144 433 + 166743 -TAGTAATTATTAGTGATGTTGTTACTGTCATTCTGAAaataatagtaagtagctaatatttactgggtatttgccatgtgtcacattgtgagctgggcacttgtctctgtaagatctcatttcattaccgtgag-agctttatatacagtc--aatgatttcttcattttactgatgaagatattgaggttcagagaggtttggaaatttatgtaagctctcacagctagcaaaggtcataaccagaaaactaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACGCTTT--AAGTCCTAAAATTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACGTAAA----------------------------------------------ATATGAAAATTATACTTATGAAAC---------ATC------CATATTT---------CTAAAAATAATTTCCTGTTGGAACATCTTTATAATTATATACAACATA s panTro5.chr21 3629501 459 + 33445071 -TAGTAATTATTAGTGATGTTGTTACTGTCATTCTGAAaataatagtaagtagctaatatttactgggtatttgccatgtgtcacattgtgagctgggcacttgtctctgtaagatctcatttcattacggtgag-agctttatatacagtc--aatgatttcttcattttactgatgaagatattgaggttcagagaggtttggaaatttatgtaagctctcatagctagcaaaggtcataaccagaaaactaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACGCTTT--AAGTCCTAAAATTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACGTAAACACAAGGCTT--CTTTTT----------AAAAAGTATC--------ATATGAAAATTATACTCATGAAAC---------ATC------CATATTT---------CTAAAAATAATTTCCTGTTGGAACATCTTTATAATGATATACAACATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17264789 459 + 46275980 -TAGTAATTATTAGTGATGTTGTTACTGTCATTCTGAAaataatagtaagtagctaatatttactgggtatttgccatgtgtcacattgtgagctgggcacttgtctctgtaagatctcatttcattacggtgag-agctttatatacagtc--aatgatttcttcattttactgatgaagatattgaggttcagagaggtttggaaatttatgtaagctctcatagctagcaaaggtcataaccagaaaactaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACGCTTT--AAGTCCTAAAATTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACGTAAACACAAGGCTT--CTTTTT----------AAAAAGTATC--------ATATGAAAATTATACTCATGAAAC---------ATC------CATATTT---------CTAAAAATAATTTCCTGTTGGAACATCTTTATAATGATATACAACATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3203459 458 - 13858734 -tagtaattattagtgatgttgtTACTGTCATTCTG-Aaataacagtaagtagctaatatttactgggtatttgccatgtgtcacattgtgagctgggcacttgtctctgtaagatctcatttcattaccatgag-agctttatatacagtc--aatgatttcttcattttacttatgaagatattgaggttcagagaggtttggaaatttatggaagctctcacagctagcaaaggtcataaccagaaagctaaataaggtctgAATTAGGAATAAAAGACATTGAAAGACCCTTT--AAGTTCTAAAATTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACATAAACACAAGGCTT--CTTTTT----------AAAAAGTATC--------ATATGAAAATTATAATTACGAAAC---------ATC------CATATTT---------CTAAAAATAATTTCCTGTTGGAACATCTTTATAATTATATACAACATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4391533 454 + 32716333 -TCGTAATTATTAGTGATGTTATTACTGTTATCCTGAAaataacagtaaatagctaatatttactgagtat-----atgtgtcacattgtgagctgggcacttgtctctataagatctcatttcattactgtgac-agctttatatacagtc--aaggatttcctcattttactgatgaagatactgaggtttagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcataaccagaaaattaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACCCTTT--AAGTTCTAAAATTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGATTTTTAACTTTACATAAACACAAGACTT--CTTTTT----------AAAAAGTATC--------ATATGAAAATTATACTTATGAAAC---------ATC------CATATTT---------CTAAAAATAATTTCCTGTTGGAatatctttataattatatctaacata i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155346838 459 - 185818997 -TAGTAATTATTAATGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtatttgccacgtggcacattgtgagctgggcactggtctctataagatctcatttcattaccatgaa-agctttatatacagtc--aatgatttcctcattttgctgatgaagatattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaaagttaaataaggtctgAATTAAGAATAAAAGACATTAAAAGACCCTTT--AAGTTCCAAATTTCACAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACATAAACACAAGACTT--CTTTTC----------AAAAAGTATC--------ATATGAAAATTATACTTATGAAAC---------ATC------CATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCGAACATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162169541 459 - 192294377 -TAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtatttgccacgtggcacattgtgagctgggcactggtctctataagatctcatttcattaccatgaa-agctttatatacagtc--aatgatttcctcattttgctgatgaagatattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaaagttaaataaggtctgAATTAAGAATAAAAGACATTAAAAGACCCTTT--AAGTTCCAAATTTCACAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACATAAACACAAGACTT--CTTTTC----------AAAAAGTATC--------ATATGAAAATTATACTTATGAAAC---------ATC------CATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCGAACGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8647555 459 + 9440265 -TAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtatttgccacgtggcacattgtgagctgggcactggtctctataagatctcatttcattaccatgaa-agctttatatacagtc--aatgatttcctcattttgctgatgaagatattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaaagttaaataaggtctgAATTAAGAATAAAAGACATTAAAAGACCCTTT--AAGTTCCAAATTTCACAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAGCTTTACATAAACACAAGACTT--CTTTTC----------AAAAAGTATC--------ATATGAAAATTATACTTATGAAAC---------ATC------CATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCGAACATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8378612 459 + 21915920 -GAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtatttgccacgtggcacattgcgagctgggcactggtctctataagatctcatttcattaccatgaa-agctttatatacagtc--aatgatttcctcattttgctgatgaagatattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaaagttaaataaggtctgAATTAAGAATAAAAGACATTAAAAGACCCTTT--AAGTTCCAAATTTCACAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACTTTACATAAACACAAGACTT--CTTTTC----------AAAAAGTATC--------ATATGAAAATTATACTTATGAAAC---------ATC------CATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCGAACATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14955001 456 - 90373283 -TAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtatttgccacgtgtcatattgtgagctgggcactggtctctataagatctcatttcattaccatgag-aactttatatacagtc--aacgatttcctcattttgctgatgaagatattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaaaattaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACCCTTT--AAGTTCCAAATTTCAGAGTAAAATAGGAGTCACTGA------------------------------------------------------CTGAATTTTAACCTTACATAAATACAAGGCTT--CTTTTT----------AAAAAGT-----------ATATGAAAATTATATTTATGAAAC---------ATC------CATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCAAACATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2120324 459 + 4234846 -TAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtatttgccacgtggcacattgcgagctgggcactggtctctataagatctcatttcattactatgaa-agctttatatacagtc--aatgatttcctcattttgctgatgaacacattgagattcagagaggtttagaaatttatgtaagctctcacagctagcaaaggtcagaaccagaaagttaaataaggtctgAATTAAGAATAAAAGACATTAAAAGACCCTTT--AAGTTCCAAATTTCACAGTAAAATAGGAGCCACTGA------------------------------------------------------CTGAATTTTAACTTTACATAAACACAAGACTT--CTTTTC----------AAAAAGTATC--------ATATGAAAATTATACTTATGAAAC---------ATC------CATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATCGAACATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 126459 459 - 13750039 -CAGTAATTATTAGTGATGTTATTACTGTTATTCTGAAaataacagtaagtagctaatatttactgggtatttgccaagtgtcacattgtgagctgggcactggtctctataagatctcatttcattaccacgag-agctttatctacagtc--aatgatttcctcattttactgatgaagatattgagattcagagaggtttagaaatttatgtaagttctcacagctagcaaaggtcagaaccagaaaattaaataaggtctgAATTAAGAATAAAAGACATTGAAAGACCCTTT--AAGTTCCAAATTTCAGAGTAAAATAGGAGTCACCAG------------------------------------------------------CTGAATTTTAACTTTACATGAACACAAGTCTT--CTTTTT----------AAAAAGTATC--------ACGTGAAAATTATACTTATGAAAC---------ATC------CATATTT---------CTAAAACTAATTTCCTGTTGGAATATCTTTATAATTATATTGAACATA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21881763 458 + 50472720 -taTTAATTATTAGTGATGTTATTACTGTTATTCTGAAAATCACAGTtagtacctaatatttactgggtgtttgccatatctcatattgtgagctgag-acttttccccataggatctcatgtcactaccatgtg-ggctttatatatagtcagaatgatttcctcattttactgatgacaatattaaggtacaggggggtttcaaaatttacataagctctcacagatagcaaaggtcagaaccagaaaataaaataaggtctGAACTAAGAATAAAAGACATTGAAAGACCCTTT--CAGTTCTAAAATTCAGAGTAAAATAGGAATCACTGA------------------------------------------------------CTGAATTATAACTTTATATAAACAT--GCCTC--CTTTTT----------AAAAAGTATC--------ATATGAAAGTTATAGTTATGAAAC---------ATA------TATATTT---------CTAAAAATAATTTCCTGTTGGGATATTTTTATAATTATGTCTAATATA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4992581 456 + 13128814 -TATTAATTATTAGTGATGTTATTACTGTTATCCTGAAAATCACAGTAAGTACctaatatttactgggtgtttgccatgtctcacattgtgagctgggcacttttccccataggatctcatgtcattacaatgag-ggctttatatatagtcagaatgatt---tcatttcactgatgaagatattaaggttcaggggggtttcaaaatttacatacattctcacagctaacaaaggtcagaaccagaaaataaaataaggtctgAACTAAGAATAAAAGACATTGAAAGACCCTTT--CAGTTCTAAAGTTCAGAGTAAAATAGGAATCACTGA------------------------------------------------------CTGAATTATAACTTTATATAAACAT--GTTTC--CTTTTT----------TAAAAGTATC--------ATATGACAGTTATACTTATGAAAC---------ATA------TATATTT---------CTAAAAATAATTTCCTGTTGGGATATCTTTATAATTATGTCTAATATA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9567126 459 - 14377064 -TATTAATTATTAGTGATGTTATTAATGTTATTCTGAAAATCACAGTAagtacctaatatttactgggtgtttgccatgtctcacattgtgagctgggcacttttccccataggatctcatgtcattaccatgag-ggctttatatatagtcagaatgatttcctcattttactaatgaggatattaaggtacagggggatttcaaaatttacgtaagctctcacagctagcaaaggtcagaaccagaaAATTAAATAAGGTCTGAACTAAGAATAAAAGACATTGAAAGACCCTTT--CAGTTCTAAGATTCAGAGTAAAATAGGAATCACTGA------------------------------------------------------CTGAATTATAACTTTATATAAACAC--GTCTC--CTTTTT----------AAAAAGTATC--------ATATGAAAGTTATACTTATGAAAC---------ACA------TATATTT---------CTAAAAATAATTTTCTGTTGGGATATCTTTATAATTATGTCTAATATA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8690460 458 + 9889416 -TATTAATTATTAGTGATGTTATTACTGTTATTCTGAAAATCACAGTAagtatctaatatttactgggcgtttgccttgtctcacattgtgagctgggcacttttccccataggatctcatgtcattaccatgag-ggctttatatatagtcagaatgatttcctcattttactgatgaggatattaaggtacaggggggtttcaaaatttacgtaagctctcacagctagcaaaggtcagaaccagaaAATTAAATAAGGTCTGAACTAAGAATAAAATACATTGAGAGACCCTTT--CAGTTCTAAAATTCAGAGTAAAATAGGAATCACTGA------------------------------------------------------CTGAATTATAACTTTATATAAACAC--ATCTC--CTTTTT----------AAAAAGTATC--------ATGTGAAAATTATACTTATAAAAC---------ATA------TATATTT---------CTAAAAATAATTTCCT-TTGGGATACCTTTATAATTATGTCTAATATA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19154191 470 + 47401472 -tagtaattattaattatgttgttTCTGTTAATATGAAAATaataataagtcactaacatttattgggcacttgccatatgtcatactgtaagttgggcatttttccctgtaagatctcacttaatcaccacaagaaactctatatatagtaagaattatttccttattttactaataaggatattgagatatagggaggtttagaaacttacccaagctctcgtagctagtaaagggcagagccagaaaattacctaaggtctcAATTAGGAATAAAAAGTGTTGAAAAATGCCTT--CAGTTCTAAAATTCAGATTGAAATAGGAGCTGCTTA------------------------------------------------------CTGAATTATAA--TGGTATAAAAGTAATACTT--GCTTTT---------AAAAAAGCATT--------ATATGAAAATTATACTTATAAAACAAACATATTATC------CATATTT---------CTAAAAATGATTCCCTGCTGGAATATCCTCATATTACTATCTAATATA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20718899 463 - 38779656 -TAGTAATTATTAATTATGTTATTACTGTTAATATGAAaataacagtaagtagctaacatttattaggtacttgtcatatgtcatactgtgagctgggcagtttttcctataagatctcatttaatcaccacgag-aactctatatacagtaagaattatttccttgttttactgataaggacatcaaggtatagggaggtttagaaacttaccc-agctctcat---------agggcagagccagaaAATTA------ATCTCAATTAGGAAGAAAAGATTTTGAAAGACCCCTTCACACATCTAAAATTCAGACTGAAATAGGAATCACTTA------------------------------------------------------CTGAATTACAA--TTGCATATAAGTAAGACTC--ACTTTTTTTAAAAAGAAAAAAGCATT--------ATATGGAAATTATACTTATAAAACACACATATTATC------CATATCT---------CTAAAAATGATTCCCTGCTAGAATATCCTTATATTTATATCTAATAT- i otoGar3.GL873528 I 902 C 0 s mm10.chr16 78089864 464 + 98207768 -CAGTAATTAGTAATTATGTTATCAATGTTAATATGAAaataacagtaaacagctagcatttattgggtgctcgccatatgttgcacagtaagttgggcacttttccctgtaagatctcatttaatcagcacaga-ggtttcacct--agtaagaatcactaccctgttt-atcctcagggtcgctgagatacatagagctctaagaacattcccgagccttcatagctaacaatgtgcagggccCCAAAAGTAACAAAAGTCCAAATTAGGAATAAAGGGTACTGAAATACCCTCT--CAGTTATAAAATTGAGGTTAAAATGGGAATCCTGCA------------------------------------------------------CTCAAATATAA--GTGTATGGGGGTAAGGCTC--GCTTTA----------AGTAAAAACCTTTCCTCGGTGTGGAAGCT------AAGAAAC---------AAA------CATATCTCT---GTTGCTAAAAATCATTTCTCACTGGAATTTCCTTAGAACTGTGTGTTACACA i mm10.chr16 C 0 I 374 s canFam3.chr31 13779845 490 + 39895921 -cagtaattattagttatgttattatggtgattatgaaaataacagt----agctaacatttattaggtgctta------ggcacagagcatgttg--------------taagatctcatttagttgccgcaag-gactctacatccagtaagaactgtttccccgttttaccagtgaggacactcaggtacagagagggttagaaatttgcccaagttcacatagct---aaacagcaggaccaTAAAATTA----GGGTCTAAATTAGCAACAGAAGATGCTCAAAGACCCCTT--CAGTTCTAAAATTAAAGTTAAAATAGGAATCATTTAAAAAAAAGAAGAAAACCAGTTAACCGGAAAAAAAAAAAAAAAAGGAATCATTTGCCAAATTATAGCTCTGCATAAA-GTAAGACTG--GCTTTA------------AAAGTATT--------ATAGGAAAATTTTACCTATGAAAC---------AAA------CACATTACCCAAAGGGCTAAAAATTGTTCCCTGTTAGTATAACTTTATAATGCTATGTAACATA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3524239 444 - 6883506 ttaaaaattactaatttttttatt------attatGAAaataacagt----atctaacatttatggggtgcttatcatttgtcaca-----------gtacttttccctaaaagatctcatttaatcaccacaat-gaccctacacacattaagagtcatttccccattttattgatgaagatgccaaggtatagagaaatttcacaacttgcccaaattctcagaggtagtaaagagcagaaacagaaaattaaccaaaatc--AATTTTGA--TAAAGATGATGAAAGTCTTCTT--CAGTTC-AAAATTCAGAATAAAATGTGAATCACCTA------------------------------------------------------CTGAATTATAGCTCTGCATGGTGGTAAGACCTGCTTTTTT----------TTAAAGCATT--------GTATGAAAAATATACTAATGAAAA---------AACACTTGACATATTT---------CTAAAAATAATTCCCAGTTAGAATATATTTTTATTAGTATCTAATATA i dasNov3.JH568778 C 0 C 0 a score=381655.000000 s hg38.chr21_KI270874v1_alt 13577 35 + 166743 GTTTAATTTATAAACTTATTTTAGATGTACAGCTA s panTro5.chr21 3629960 35 + 33445071 GTTTAATTTATAAACTTATTTTAGATGTACAGCTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17265248 35 + 46275980 GTTTAATTTATAAACTTATTTTAGATGTACAGCTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3203917 35 - 13858734 GTTTAATTTATAAACTTATTTTAGATGTACAGCTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4391987 35 + 32716333 gtttaatttataaacttatTTTAGATGCACAGCTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155347297 35 - 185818997 GTTTAATTTATAAAGTTATTTTAGATGCACAGCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162170000 35 - 192294377 GTTTAATTTATAAAGTTATTTTAGATGCACAGCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8648014 33 + 9440265 GTTTAATTTAT--AGTTATTTTAGATGCACAGCTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8379071 35 + 21915920 GTTTAATTTATAAAGTTATTTTAGATGCACAGCTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14955457 35 - 90373283 GTTTAATTTATAAAGTTATTTTAGATGCGCAGCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2120783 35 + 4234846 GTTTAATTTATAAAGTTATTTTAGATGCGCAGCTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 126918 35 - 13750039 GTTTAATTTATAAAGTTATTTTAGATGCACAGCTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21882221 34 + 50472720 GTTTGATTTGTAAACTT-TTTTAGATGCACAGGTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4993037 34 + 13128814 GTTTGATTTATAAACTT-TTTTAGATGCACAGGTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9567585 34 - 14377064 GTTTGATTTATAAACTT-TTTTAGATGTACAGGTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8690918 34 + 9889416 GTTTGATTTATAAACTT-TTTTAGATGCACAGGTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19154661 35 + 47401472 GCTTGATTTGCAAACCTTTTTTAGAAGCATAGCTC i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20719362 24 - 38779656 -----------AAATGTTTTTTAGAAGCACATATA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13780335 26 + 39895921 --ATTACTTACAAACTT-TTTTAA------AGCTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3524683 35 - 6883506 ATTTGATTCACAACCTTTTTTCAGAAGCATAGCTA i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78090328 374 + 98207768 I a score=5110328.000000 s hg38.chr21_KI270874v1_alt 13612 362 + 166743 CCATTTGAAAGGAGAACGA-CCTCTAATTTTTA---TATGAAATACCATGCAGTATAATATTACT-TCTTGTTAATTTTCAATTAACAATT--TTCCTTTTTTAAATCATGTCTCCA----ATTATTGTCTGTGCCCTTTTTCGGCTGTGCAACTGAAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCGTGCACTCTAAAATATTTAGCCAGAGCAACAAAGTTTATGTCAATCCTAGTTATTATCAGCCTAGAAATCTCTTGGAACTAGAATCCATTGTAAAGTCAAATTAAAGGTTTCTGTCTCTTGGTAAAGCAGGAc s panTro5.chr21 3629995 362 + 33445071 CCATTTGAAAGGAGAATGA-CCTCTAATTTTTA---TATGAAATACCATGCAGTATAATATTACT-TCTTGTTAATTTTCAATTAACAATT--TTCCTTTTTTAAATCATGTCTCCA----ATTACTGTCTGTGCCCTTTTTTGGCTGTGCAACTAAAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCGTGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTAGTTATTATCAGCCTAGAAATCTCTTGGAACTAGAATCCATTGTAAAGTCAAATTAAAGGTTTCTGTCTCTTGGTAAAGCAGGAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17265283 362 + 46275980 CCATTTGAAAGGAGAATGA-CCTCTAATTTTTA---TATGAAATACCATGCAGTATAATATTACT-TCTTGTTAATTTTCAATTAACAATT--TTCCTTTTTTAAATCATGTCTCCA----ATTACTGTCTGTGCCCTTTTTCGGCTGTGCAACTGAAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCGTGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTAGTTATTATCAGCCTAGAAATCTCTTGGAACTAGAATCCATTGTAAAGTCAAATTAAAGGTTTCTGTCTCTTGGTAAAGCAGGAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3203952 362 - 13858734 CCATTTGAAAGGAGAATGA-CCTCTAATTTTTA---TATAAAATACCATGCAGTATAATATTACT-TCTTGTTAATTTTCAATTAACAATT--TTCCTTTTTCAAATCATGTCTCCA----ATTACTGTCTGTGCCCTTTTTCGGCTGTGCAACTGAAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCGTGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTAGTTATTATCAGCCTAGAAATCTCTTGGAACTAGAATCCATTGTAAAGTCAAATTAAAGGTTTCTGTCTCTTGGTAAAGCATGAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4392022 362 + 32716333 CCATTTGAAAGGAGAACGA-CCTCTAATTTTTA---TATAAAATACCATGCAATGTAATATTACT-TCTTGTTAATTTTCAATTAACAATT--TTCCTTTTTTAAATCATGTCTCCA----ATTACTGTCTGTGCCCTTTCTCGGCTGTGCAACTGAAATTTTTGACTGAAGTATAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTAGTTATTGTCAGCCTAGAAATCTCTTGGAATTAGAATCCATTGTAAAGCCAAATTAAAGGTTTCTGTCTCTTGGTAAAGCAGGAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155347332 361 - 185818997 CCATTTGAAAGGAGAATGA-CCTGTAATTTTTA---TATAAAATACCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT--TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162170035 361 - 192294377 CCATTTGAAAGGAGAATGA-CCTGTAATTTTTA---TATAAAATACCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT--TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8648047 361 + 9440265 CCATTTGAAAGGAGAATGA-CCTGTAATTTTTA---TATAAAATACCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT--TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGAGTCTCTTGGTAAAGCAGGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8379106 361 + 21915920 CCATTTGAAAGGAGAATGA-CCTATAATTTTTA---TATAAAATACCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT--TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTACTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCCGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14955492 361 - 90373283 CCATTTGAAAGGAGAATGA-CCTGTAATTCTTA---TATAAAATATCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT--TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2120818 361 + 4234846 CCATTTGAAAGGAGAATGA-CCTGTAATTTTTA---TATAAAATACCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAGCAATT--TGCCTTTTTTAAATCACGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATGTCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTCGGTAAAGCAGGAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 126953 361 - 13750039 CCATTTGAAAGGAGAATGA-CTTGTAATTTTTA---TATAAAATACCATGCAGTGTAATATTAC--TCTCGTTAATTTTCAATTAACAATT--TGCCTTTTTTAAATCATGTCTCCA----ATTACTGTGTGTGCCCTTTTTCAGCTGTGCAACTGCAATCTTTGACTGAAGTATAATTTCATTATTTGTAA---AGGCAGAAATAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCATGCACTCTAAAATGTTTAGCCAGAGCAACAAAGTTTATATCAATCCTGGTTATTATCAGCCTAGAAATCTCTTGGAATTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21882255 358 + 50472720 CCATTTCAAAAGAGAACAA-CCTGCAATTTTTA---TATAAAATAACATGCAGTGGAATATTATTACTTCGTTAATTTTCATTTAAC-ATT--TTCCTTTTTTAAATCATGTCTACA----ATTACTGTCTGTGCCCTTTTCTGATTGCACAACTGAAATCT----CTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAGTTGTCTATG----CTCATTTTAATTTTAGTAGGACATGTGTTCTAAAATGTTTAGTGGGAGCAAGAAAATTTATGCCATTCCTAGTTATTATCAGCCTAGAAATCTCTTGGACTTAGAATCCATTGCAAATCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4993071 355 + 13128814 CCATTTCAAAAGAGAACA----TGTAATTTTTA---TATAAAATAACAGGCAGTATAATATTATTACTTCATTAATTTTCATTTAAT-ATT--TTCCTTTTTTAAATCATGTCTACA----ATTACTGTCTGTGCCCTTTTCTGGTTGCACAACTGAACTCT----TTGAAGTGTAATTTCGTTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTGATTTTAGTAGAACATGCATTCTAAAATGTTTAGCCAGAGCAACAAAATTTATGCCATTCCTAGTTATTATCAGCCTAGAAATCTCTTGAAATTACAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAACGCAGGAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9567619 362 - 14377064 TCATTTCAAAAGAGAATAA-CCTGTAATTTTTA---TATAAAATAACATGCAGTATAATATTATTCCTTCATTAATTTTCATTTGAC-ATT--TTCCTTTTTTAAATCATGTCTACA----ATTACTGTCTGTGCCCTTTTCTGGTTGCACAATTGAAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAACATGCGTTCTAAAATGTTTAGCCAGAGCAACAAAATTTATGCCATTCCTAGTTATTACCAGCCTAGAAATCTCTCGGAATTAGAATCCATTGCAAAGCCAAATTAAAGGTTTGTGTCTCTTGGTAAAGCAGGAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8690952 360 + 9889416 CCATTTCAAAAAAAAACAA-CCTGTAATTTTTA---TATAAAATAACATGCAGTGTAATATTATTACTTCGTTAATTTTCATTTAAC-ATT--TTCC-TTTTTAAATCATGTCTACA----ATTACTGTCTGTGCCCTTTTCTGGTTGTGCAACTGAAATCTTTGACTGAAGTGTAATTTCATTATTTGTAA---AGGCAGAAACAATG-GAACTGTCTGTG----CTCCTATTAATTTTAGTAGAACATGCACTCTAAAATGTTTA-CCAGAGCAACAAAATTTATGCCATTCCTAGTTATTATCAGCCTAGAAATCTCTTGGAATTAGAATCCATTGCAAAGCCAAACTAAAGGTTTGTATCTCTTGGTAAAGCAGGAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19154696 356 + 47401472 CTATTTGAAAGGAAGACCA-CCTGTAATTTTTA---TACAAAATGCCATGCAGTATAATGTTACT-TCTTATTAATTTTCAGTTAATCAAT--TTCATCTTTTAAATCATGTAAACA----GTTACGATCTGTGCCCTTTTTTATCTGTTCAATTGAAATATTTGATTGAAGTGTAATCTTGTTATTTGCAA---AGCCAGAAACAATG-GAACTGTCTGTG----CTCATATTAATTTTAGTAGAGCACATACTCTAAAATGTTTAGCCAGAGGAACAAAGTTCATAT------CACTTATTCTCAGCCTAGAAATCTCTTGGAATTAGAATCCACTGCAAAGCCAATTTAAAGTTTGGCATCTCTTGGTAAAGAAGGAC i micMur3.chr31 C 0 I 691 s otoGar3.GL873528 20719386 359 - 38779656 CTA--TGAAAGGAAAGCCA-CCTAT--TTTTTA---CATAAAATGCCAT-CAGTGTAATATTACT-TCTTGTTTATTTGTAGTTAACTAAT--TTCTCCTTTTAAATCATGTCAACA----GTTACTATCTGTGCCCTTTTTTGTTCGTCCAGTTGAAATCTTTTATCGAGGTATAATTTCATTATTTGTAAAGGAGGCAGAAACAATG-GAACTGCCTGTG----CTCATATTAATTTTGGTAGAGCGTGTACTCTACAGTGTTTAGCCAGAGGAACAAAGTTCACGTCCATCCCACTAATTATCAGCCTATAAATCTCTTGAAACTGGAATCCATTGCAAAGCCAATTTAAAGTTTTGCATCTCTTGGTAAAGAAGGA- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78090702 367 + 98207768 CTATTTGAAAGGAAGATCG-CCTGGAATTTTTA---CACAAAATACTGTGCAGTACAATATTACT-TTATCTTGACATTCAATTAACCGTTA-TTATTTTTTTAAATCATGATCAAACGTGATGGCTCTTCGTG-CCTTTTTCAGCTGCGCAACTGAAATCTTCGATGGAGCAGTCATGCCATCA-TTGTAA---AGGCAGCAACAATGAAAACTGCTTGTGACGTTTCATCTCAACTTCATTAAGGCATACATGCTAAACAG-CCACCCTGAGCAAAGACAGCCGTGCCAGCTCTGGATATTACCCACTTAGAAGTCTA--GGAGTTGGAACACATGGCAAAACTCAGCCCAAGATTTCCATTTCTTAGTTAAGCAGAAC i mm10.chr16 I 374 C 0 s canFam3.chr31 13780361 337 + 39895921 CCATTTGAAAAGAAGACTACCCCATAATTTTTA---TATAAAATACCA---GAAGTAATGTCAC----TTGTTAATATTCAATTGGCCATT--TTCCTCTTTTAAGTCATACCTACC----ATTAACATCTGTG-CCTCTTTTGACTGTGCATTTGAAATATTTGACTAAAATGTAATTTCATTTTTTATAA---AGGCAGAAACAATG-AAA----CCATA----CTCATATTAATTTTAGTAGAGCATGTACTATAAAATGTTTAGTCAGAGTAACATAGTTCATGTCAATCCTAGTAATTAGCAGCTTATAAATCTCT------TAGAATCCATTGCAAAGCCAATTTAAGGGTTTGAGTCTCTTCGTA--------- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3524718 362 - 6883506 CTGTTTTAAAGGAAGACCA-CCTGTAATGTTTACATTACAAAATACCATGCAGTGTAATATTGCT-TCTCATTAATCTTCATTTGTCCATTATTTTTCTTTTCAAATCACACCTACA----ATTACTACCTG-GACCTATTGTAGCAGTGCAGTTTAAAGCCTTCATTGCAATATAATTTGAGTATTTATAA---AAGCAGAAACAATG-AAATTATTT-TG----CTTGTATTAATTTTAGTAGAGCACATACTCTAAAATGTTTAGAGAAGGCAGTGAAGTTCAGGTCACTTCCAGTTATTATCAGTCTAGAAATCTCTTAAAATTAGAATGTACTAGAAAACCAATTTAAGGGTTTCAGTCT---GGTAAAGCAGGAC i dasNov3.JH568778 C 0 C 0 a score=2556519.000000 s hg38.chr21_KI270874v1_alt 13974 219 + 166743 tctctcacttattacatttcaaagaacaataaactgcttatataattttcttcacaccatgttggaacttatccttatgcctttgctcacactgag-ttgggcttaaaatattt-cctcctcctttgtaaagtcttagatatcctttcatttattctttaagactcatctttgtgtcac---cttctaagacatcttcttta----ttgccctaCTAAAAACCACATA- s panTro5.chr21 3630357 219 + 33445071 TCTCTCACTTATTACATTTCAAAGAACAATAAACTGCTTATATAATTTTCTTCACCCCATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCGTAAAATATTT-CCTCCTCCTTTGTAAAGTCTTAGATATCCTTTCATTTATTCTTTAAGACTCATCTTTGTGTCAC---CTTCTAAGACATCTTCTTTA----TTGCCCTACTAAAAACCACACA- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17265645 219 + 46275980 TCTCTCACTTATTACATTTCAAAGAACAATAAACTGCTTATATAATTTTCTTCACCCCATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGAGCGTAAAATATTT-CCTCCTCCTTTGTAAAGTCTTAGATATCCTTTCATTTATTCTTTAAGACTCATCTTTGTGTCAC---CTTCTAAGACATCTTCTTTA----TTGCCCTACTAAAAACCACACA- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3204314 219 - 13858734 TGTctcacttattacatttcaaagaacaataaactgcttatatagttttcttcacaccatgttggaacttatccttatgcctttgctcacactgag-ttgggcttaaaatattt-cctcttcctttgcaaagtcttagatatcctttcatttattctttaagactcatctttgtgtcac---cttctaagacatcttcttta----ttgccctcctaaAAACCACACA- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4392384 217 + 32716333 TCTCTCACTTATTACATTTCAAAGAACAATAAACTGTTTATATGGTTTTCTTCACACCA--TTAGAATTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTCTTAGATATCCTTTCATTTGTTCTCTAAGACTCATCTTTGTGTCAC---CTTCTAAAACATCTTCTTTA----TTGCCCTACTAAAAACCACACA- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155347693 219 - 185818997 TCTCTCACTTATTACATTTCAGAGAAAAATATACTGCTTATCTAGTTTTCTTCACAACATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGCAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCAC---CTTCTAAAACATCTTCTTTA----TTGCCCTACTAAAATCCACACA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162170396 219 - 192294377 TCTCTCACTTATTACATTTCAGAGAAAAATATACTGCTTATCTAGTTTTCTTCACAACATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGCAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCAC---CTTCTAAAACATCTTCTTTA----TTGCCCTACTAAAATCCACACA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8648408 219 + 9440265 TCTCTCACTTATTACATTTCAGAGAAAAATATACTGCTTATATAGTTTTCTTCACAACATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGAATAATGTTTGTGTCAC---CTTCTAAAACATCTTCTTTA----CTGCCCTACTAAAATCCACACA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8379467 219 + 21915920 TCTCTCACTTATTATATTTCAGAGAAAAATAAACTGCTTATATAGTTTTCTTCACAACATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCAC---CTTCTAAAACATCTTCTTTA----TTGCCCTACTAAAATCCACACA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14955853 216 - 90373283 TCTCTCACTTATTACATTTCAGAGAACAATAAACTGCTTATATAGTTTTCTTCACACCATGTTTGAACTTACTCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCAC---CTTCTAAAACA---TCTTTA----TTGCCCTACTAAAATCCACACA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2121179 219 + 4234846 TCTCTCACTTATTACATTTCAGAGAAAAATAAACTGCTTATATAGTTTTCTTAACAACATGTTGGAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTTTTAGATATCCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCAC---CTTCTAAAACATCTTCTTTA----TTGTCCTACTAAAATCCACACA- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 127314 219 - 13750039 TCTCTCACTTATTACATTTCAGAGAACAATAAACTGTTTATATAGTTTTCTTCACACCATGTTGGGACTTATCCTTATGCCTTTGCTCACACTGAG-TTAGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTTTTAGATATTCTTTTATTTATTCTTTAAGACTAATGTTTGTGTCAC---CTTCTAAAACATCTTCTTTA----TTGCCCTACTAAAATCCACACA- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21882613 214 + 50472720 TCTCTCACTTATTTCATTTCCAAGAACAATAAACTGCTTCTTTAGTTTTCTTCCTACCATGTTAAAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGT--AGTCATACATATCCTTTCATTTATCCTTTAAGATTCATCTTTGTGTCAC---CTTCTAAAACATCTTTT-------TTGCCCTACTCAAAACCACACA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4993426 219 + 13128814 TCTCTCACTTATTTCATTTCCAAGAACAATAAACTGCTTCTTTAGTTTTCTTCATACCATATTAAAACTTAGCCTTATGCCTTTGCTGACACCGAG-TTCGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTCTTACACATCCTTTCATTTATCCTTTAAGACTCATCTTTGTGTCAT---CTTCTAAAATATCTTCTTTA----TTGCCCTACTCAAAACCACACA- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9567981 219 - 14377064 TCTCTCACTTATTTCATTTCCAAGAACAATAAACTGCTTCTTTAGTTTTCTTCATACCATGTTAAAACTTGTCCTTATGCCTTTGCTCACTCTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTGTTACATATCCTTCCATTTATCCTTTAAGACTCATCTTTGGGTCAC---CTTCTACAACATCTTCTTTA----TTGCCCTACTCAAAACCACACA- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8691312 216 + 9889416 TCTCT--CTTATTTCATTTCCAAGAACAATAAACTGCTTCTTTAGTTTTCTTCATACCATGTTAAAACTTATCCTTATGCCTTTGCTCACACTGAG-TTGGGCTTAAAATATTT-CCTCCTCCTTTGTAAAGTCTTACATATCCTTTCATTTATCCTTTAAGACTCATCTTTG-GTCAC---CTTCTAAAACATCTTCTTTA----TTGCCCTACTCAAAACCACACA- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20719745 221 - 38779656 -CTGGTgctcattaaacttccaagaacaatgaattgtttatatcgttttcctcacaccatgttggagttcatcccggtgcctccgcttacgctgagttttggctggtaatgttg-ccgccttcttcatcaactcttacctatcttttcatttattctttaaaactcagctttgtgtcactttcttctagatcatcttcctca----ttaccc-gctgaaaaccacacg- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78091069 178 + 98207768 TGGCCCATTCATTCCATACCCAGGAACAATGAACTACTCACA----CTTCTTTGTATCATGTTGGAGCT----------------------------TTTAGATTATAATATTTATCCCCTCCTTGGTATACTCTTACACATCCTTTA-----------AAGACTCAGTTTTGTGTCTG---CTCCTAGAACCATTTCCGCT----TTGTTCTACTAAACCTCATGTA- i mm10.chr16 C 0 I 172 s canFam3.chr31 13780698 195 + 39895921 -------------ACAGTT------ACAATGAACTGCTTTTATAGTTTTCTTCTCACCATGTTGGAGCTTACCCC-ATCCCTTCGCTAGCACTGAATTTTGGCCTGCAATATTT-TCTTCTCCTTGGTGAA--CTCATATATCCCCCC-----TTCTTTAAGACTCAGCATTGTGTCACCTCCTTCTAGAACATCATCTTCA-----TGCCCCATGAACACCCACACA- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3525080 220 - 6883506 AGTTTCATTCACTAAACTTGCAGCAACAATCAACTGCTTACTTATATTTCCTTATAC-----TCAAGCTCACCCTTACAACTTTGCACACACTCAG-TTTTGACTTTTATATTT-TCCCATTCCTGATAAATTCTTACATAGCTTTTCTTTAAGTCTTTAAGACTCACCTTT--GTCACTTCCTTCTAGAACACTTTTTAGAGAGACTGCCTCTCTAAAACCCACATTA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19155052 691 + 47401472 I a score=3445335.000000 s hg38.chr21_KI270874v1_alt 14193 346 + 166743 TACCTACTCCCAGGCAAAA--------T------GA------TGCCCCTTTATAAAGATCTTTATTGCTGCACATATGGTATTACGGTACAATTAAC----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGTTTCAGGAAGGttttttg----------tt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatggggacaattatgggacattatattcttcacatcctgagca-aactgatgctcctgccttggcctctggagtagctagaactgcagacatggatcaccatgactggT-TTCAGGTAGCTTT-TGAGTGTAGAAGAATAACCCAATAGTTGCCTGATCTAGG s panTro5.chr21 3630576 346 + 33445071 TACCTACTCCCAGGCAAAA--------T------GA------TGCCCCTTTATAAAGATCTTTATTGCTGCACATATGGTATTACGGTACAATTAAC----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGTTTCAGGAAGGttttttg----------tt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatggggacaattatgggacattatattcttcacatcctgagca-aactgatgctcctgccttggcctctggagtagctagaactgcagacatggatcaccatgactggT-TTCAGGTAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17265864 346 + 46275980 TACCTACTCCCAGGCAAAA--------T------GA------TGCCCCTTTATAAAGATCTTTATTGCTGCACATATGGTATTACGGTACAATTAAC----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGTTTCAGGAAGGttttttg----------tt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatggggacaattatgggacattatattcttcacatcctgagca-aactgatgctcctgccttggcctctggagtagctagaactgcagacatggatcaccatgactggT-TTCAGGTAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3204533 346 - 13858734 TACCTACTCCCAGGCAAAA--------T------GA------TGCCCCTTTATGAAGATCTTCATTGCTGCACATATGGCATTATGGTACAATTAAT----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGTTTCAGGAAGGttttttg----------tt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatggggacaattatgggacattatattcttcacatcctgagca-aactgatgctcctgccttggcctttggagtagctagaactgcagacatggatcaccatgactggT-TTCAGGTAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4392601 346 + 32716333 TACCTACTCCCAGGCAAAG--------T------GA------TGCCCCTTTATAAAGATCTTTATTGCTGCACATATGGCATTATGGTACAATTAAT----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGTTTCAGGAAGGtttttca----------tt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatagggacaattatgggacattatactcttgaaatcctgagca-aagtgatgctcctgccttggcctctggagtagctggaactacagacatggatcatcatgactggc-tTCAGGTAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155347912 347 - 185818997 TACCTAGTCCCAGGCAAAA--------T------GA------TGTTCCTTTATAAAGATCTTTATTGCTGCACATATGGCATTATGGTACAATTAAT----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGTTTTGCG---------ttt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggcacaattatgggacattatattcttgaaatcctgagca-aagtgatcctcctaccttggcctctggagtagctggaactacagcgatgcatcaccatgATTAGC-TTCAGGCAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162170615 347 - 192294377 TACCTAGTCCCAGGCAAAA--------T------GA------TGTTCCTTTATAAAGATCTTGATTGCTGCACATATGGCATTATGGTACAATTAAT----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGtttttcg---------ttt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggcacaattatgggacattatattcttgaaatcctgagca-aagtgatcctcctaccttggcctctggagtagctggaactacagcgatgcatcaccatgATTAGC-TTCAGGCAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8648627 347 + 9440265 TACCTAGTCCCAGGCAAAA--------T------GA------TGTTCCTTTATAAAGATCTTTATTGCTGCACATATGGCATTATGGTACAATTAAT----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGtttttcg---------ttt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggcacaattatgggacattatattcttgaaatcctgagca-aagtgatcctcctaccttggcctctggagtagctggaactacagcaatgcatcaccatgATTAGC-TTCAGGCAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8379686 347 + 21915920 CACCTAGTCCCAGGCAAAA--------T------GA------TGTTCCTTTATAAAGATCTTTATTGCTGCACATATGGCATTATGGTACAATTAAT----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGtttttcg---------ttt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggcacaattatgggacattatattcttgaaatcctgagca-aagtgatcctcctaccttggcctctggagtagctggaactacagcgatgcatcaccatgATTAGC-TTCAGGCAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956069 347 - 90373283 TACCTAGTCCCAGGCAAAA--------T------GA------TGTTCCTTTATAAAGATCTTTATTGCTGCATGAATGGCATTATGGTACAATTAAT----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGtttttcg---------ttt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggcacaattatgggacattatattcttgaaatcctgagca-aagtgatcctgctaccttggcctctggagtagctggaactacagcgatgcatcaccatgATTAGC-TTCAGGCAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2121398 347 + 4234846 TACCTAGTCCCAGGCAAAA--------T------GA------TGTTCCTTTATAAAGATCTTTATTGCTGCACATATGGCATTATGGTACAATTAAT----AGTTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCACGAAGGtttttca---------ttt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggcacaattatgggacattatattcttgaaatcctgagca-aagtgatcctcctaccttggcctctggagtagctggaactacagcgatgcatcaccatgATTAGC-TTCAGGCAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 127533 346 - 13750039 TACCTAGTCCCAGGCAAAA--------T------GA------TGTTCCTTTATAAAGATCTTTATTGCTGCACATATGGCATTATGGTACAATTAAT----AATTTATATGTCATTCTTCCTTACAAGACAGAATA----TTGCTTCAGGAAGGtttttca----------tt--ttttaagtaacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggcacaattatgggacattatattcttgaaatcctgagca-aagtgatcctcctaccttggcctctggagtagctggaactacagtgatgcatcgccatgATTAGC-TTCAGACAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGTTGCCTGATCTAGG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21882827 341 + 50472720 TACATACTCCCAGGCAAAA--------T------GA------TGCCCCTTTATAAAGGTCTTAA-TGGTACACATATGGCATTACAGTACAATTAAT----TGTTTATATGTCATTCTTCTTTAAAAGACAGAATA----TTGTTTCTGGAAGCttt--------------tt--ttttaagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggtacaattatgggacattatatttttgaaatgctaggca-aaggaatcctcctgcctcggcctctggagtaggtggaactacagacatgcatcaccatgactggT-TTCAAGCAGCTTT-TGAGTGTAGAAGAACAACCCAGTAGCTACCTGATCTAGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4993645 338 + 13128814 TACATACTCCCAGGCAAAA--------T------GA------TGCTCCTTTATAAAGGTCTTAA-TGTAGCACATATGGCATTACAGTACAATTAAT----TGTTTATATGTCATTCTTCTTTAAAAGACAGAATA----TTGTTTCAGGAAGC-----------------TT--TTTTAAGTGACAGCCTAT--CTATA-CACCTagactggactgcagtggttactcatgggtacaattatgggacattatattcttgaaatgctaggca-gagtgatcctcctccctcagcctctggagtaggtggaactacagacatgaatcaccatgactggT-TTTAAGCTGCATT-TGAGTGTAGAAAAATAACCCAGTAGCTGCCTGATCTAGG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9568200 345 - 14377064 TATATACTCCCAGGCAAAA--------T------GA------TGGCCCTTTATAAACGTCTTAA-TGCTGCACATATGGAATTACAGTACAATCAAT----TGTTTATATGTCATTCTTCTTTAAAAGACAGAATT----TTGTTTCAGGTAGCttttttc----------tt--ttttaagtgacagcctct--ctatg-cacctaggctggactgctttggttactcatgggtacaattatgggacattatattcttgaaatgctaggca-aactaatcctcctgccttggcctctggagtaggtggaactacagacatgcatcaccatgactggT-TTCAAGCTGCTTT-TGGGTGTAGAAGAATAACCCAGTAGCTGCCTGATCTAGG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8691528 332 + 9889416 TACATACTCCCAGGCAAAA--------T------GT------TGCCCCTTTATAAAGGTCTTAA-TGCTGCACATATGGCATTACAGTACAATTAAT----TGTTCATATGTCACTCTTCTTTAAAAGACAGAATA----TTCTTTCAGGAAGCttttt------------tt--ttttcagtgacagcctct--ctatg-cacctaggctggactgcagtggttactcatgggtacaattatggggcattatattcttgaaatgctaggca-aagtaatcctcctgcctcagcctctggagtaggtggaactacagacatg-----------cTGGT-TTCAAGCAGCTTT-TGAGTGTAGAAGAATAACCCAGTAGCTGCCTGATCTAGG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20719966 364 - 38779656 t------------gcaaaa--------t------gaagttgctgcccttccatagaaatttccactgctgcagttactgcatgatagtgcaatgaattgtctgtttctatgtctttctttcctacaaaacAGAACGTTATTTGTTTCAGGCAGCttttttttgttgttgttttaattttcagagacaggttcttgccatgttgcccaacctggagtacagtggttatgcacaaacgcaatcgacgtgcactacagcctggaacgcctgggcctaagcaatcctcctgcctcagcctcttgagtaattggcacta-aggcatgtgccaccacacccagcTTTCAGGTTGCTTT-TGTGTGTAGAGAAACAACCTAGCAGTTGTCAGAACGAGG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13780893 226 + 39895921 ------TTCCCAGAAAAAAAATGGAATC------AG------TGCCCTTCTAC-AAGATCTCTTATG-TACATGTACTGCATTGTAGTATAATTCTC----TGTT--TATGTCTTTCTTCCCTACAAGATGACATGTTATTtgtttcaggcagcttttgta--------------tataaaaaaacaaccaca--acact-ca---aaggcatacaacaataatcac-------------------------------------------------------------------------------------------------------------gt-ttctcacagatctgtgggtctg----------ctggtagtcaactgATGGAAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3525300 253 - 6883506 TACATGTACCCACACAAAA--------TGGAGTAGA------TGCCTTCCTGTGGAAAT-TCTATCACAGCACTCACTGCATTTTAGTACAACT-GT----CTTTTACACATCTTTCTTCCTTACAAGGCTACATATTACTTGTATCAGGCAGTTTTCATG--------------CGTAGAAAAACAACTACA--AAATC---TCAAAGGCATACAGCAAT--------------------------CACCATGTTCAT--------------TACTGAT--------------CTGTGAGTCAGCTGG------------GGGTCAGC------GGA-TCTAGGC----TT-TG----------------------GTAGGCTGATCTAGG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19155052 691 + 47401472 I e mm10.chr16 78091247 172 + 98207768 I a score=846042.000000 s hg38.chr21_KI270874v1_alt 14539 72 + 166743 CTGCCTTT-TTGGCCTATTCTTCATCAAGCTGTGGGTCAGAGTGGGCATGAGTCCTTGCTTAGATCTCTATGT s panTro5.chr21 3630922 72 + 33445071 CTGCCTTT-TTGGCCTATTCTTCATCAAGCTGTGGGTCAGAGTGGGCATGAGTCCTTGCTTAGATCTGTATGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266210 72 + 46275980 CTGCCTTT-TTGGCCTATTCTTCATCAAGCTGTGGGTCAGAGTGGGCATGAGTCCTTGCTTAGATCTGTATGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3204879 72 - 13858734 CTGCCTTT-TTGGCCTATTCTTCATCAAGCTGTGGGTCAGAGTGGACATGAGTCCTTGCTTAGATCTGTATGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4392947 72 + 32716333 CTGCCTTT-TTGGCCTATTCTTCATCAAGCTGTGGGTCAGACTGGACATGAGTCCTTGCTTAGATCTGTATGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348259 72 - 185818997 CTGCCTTT-TTGGCCTGTTCTGCATCACGCTGTGGGTCAGACCGGATATGAGTCCTTGCTTAGATCTGTCTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162170962 72 - 192294377 CTGCCTTT-TTGGCCTGTTCTGCATCACGCTGTGGGTCAGACCGGATATGAGTCCTTGCTTAGATCTGTCTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8648974 72 + 9440265 CTGCCTTT-TTGGCCTGTTCTGCATCACGCTGTGGGTCAGACCGGATATGAGTCCTTGCTTAGATCTGTCTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380033 72 + 21915920 CTGCCTTT-TTGGCCTGTTCTGCATCACGCTGTGGGTCAGACTGGATGTGAGTCCTTGCTTAGATCTGTCTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956416 72 - 90373283 CTGCCTTT-TTGGCCTGTTCTGCATCACGCTGTGGGTCAGACTGGACATGAGTCCTTGCTTAGATCTGTCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2121745 72 + 4234846 CTGCCTTT-TTGGCCTGTTCTGCATCACGCTGTGGGTCAGACTGGATATGAGTCCTTGCTTAGATCTGTCTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 127879 72 - 13750039 CTGCCTTT-TTGGCCTGTTCTTCATCAAGCTGTGGGTCAGACTGGACATGAGTCCTTGCTTAGATCTGTCTGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21883168 71 + 50472720 CTGGCTTT-TTGGTCAGTTCTTCATCAAGCTGTGTGTCAGACTGGACACGAGTCCTTGCTTAGATCT-TACGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4993983 71 + 13128814 CTGGCTTT-TTGGTCAGTTCTTCATCAAGCTGTGTGTCAGACTGGACATGAGTCCTTGCTTAGATCT-TACGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9568545 70 - 14377064 C-GGCTTT-TTGGTCAGTTCTTCATCAAGCTGTGTGTCAGACTGGATATGAGTCCTTGCTTAGATCT-TATGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8691860 71 + 9889416 CTGGCTTT-TTGGTCAGTTCTTCATCAAGCTGTGTGTCAGACTGGACATGAGTCCTTGCTTAGATCT-TATGT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20720330 72 - 38779656 CTGGCTTT-TTGGCCAATTATGCGTTAAGCTGTGGGGCAGGCTGGGCTTGACTCCTTACTTAGATCCATGTGG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78091419 72 + 98207768 CTGCTTTT-AGGGCCAGTTGTGCATCCTGCTATGGGTTGGGCTCTTCTCATCTCCTTGCTAAGAGCTGCATGT i mm10.chr16 I 172 I 552 s canFam3.chr31 13781119 71 + 39895921 CTGGCTTTCCTAGCTAGTTCTGCCTCAAGCCCTGGATTCAGCTGGGCTTTAATCCTTGCTTTGGTATATGC-- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3525553 73 - 6883506 TTGCCTCTACTGGCTAGTTCAGCTTCCAGCTATGGGTCCAACTGGACCTGGCTCCTTGCTTAGATCTATATAT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19155052 691 + 47401472 I a score=734126.000000 s hg38.chr21_KI270874v1_alt 14611 62 + 166743 GTATTACTTCTGGGGCACAG-TTCTACTTATGGTGACGGAGGAACAATCAATAAATCAACCTG s panTro5.chr21 3630994 62 + 33445071 GTATTACTTCTGGGGCACAG-TTCTACTTATGGTGATGGAGGAACAATCAATAAATCAACCTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266282 62 + 46275980 GTATTACTTCTGGGGCACAG-TTCTACTTATGGTGATGGAGGAACAATCAATAAATCAACCTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3204951 62 - 13858734 GTATTACTTCTGGGGCCCAG-TTCTACTTATGGTGATGGAGGAACAATTAATAAATCAACCTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393019 63 + 32716333 GTATTACTTCTGGGGCCCAGTTTCTACTTATGGTGATGGAGGAACAATCAATAACTCAACCTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348331 63 - 185818997 GTATTACTTCTGGGGCCCAGCTTCTACTTATGGTGATgggggaacaatcaataaatcaacctg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171034 63 - 192294377 GTATTACTTCTGGGGCCCAGCTTCTACTTATGGTGATGGGGGAACAATCAATAAATCAACCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649046 63 + 9440265 GTATTACTTCTGGGGCCCAGCTTCTACTTATGGTGATgggggaacaatcaataaatcaacctg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380105 63 + 21915920 GTATTACTTCTGGGGCCCAGTTTCTACTTATGGTGATgggggaacaatcaataaatcaacctg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956488 63 - 90373283 GTATTACTTCTGGGGCCCAGTTTCTACTTATGGTGATGGGGGAACAATCAATAAATCAACCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2121817 63 + 4234846 GTATTACTTCTGGGGCCCAGTTTCTACTTATGGTGATGGGGGAACAATCAATAAATCAACCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 127951 63 - 13750039 GTATTATTTCTGGGGCCCAGTTTCTACTTATGGTGATGGGGGAACAATCAATAAATCAACCTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21883239 62 + 50472720 GTGTTGCTTCTGGGGCCCAGTTTCTACTGA-GGTGATGGAGGGACAATAAATAAATCAAGCTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994054 62 + 13128814 GTGTTGCTTCTGGGGCCCAGTTTCTACTTA-GGTGATGGAGGGACAATAAATAAATCAAGCTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9568615 62 - 14377064 GTGTTGCTTCTGGGGCCCAGTTTCTACTTA-GGTGATGGAGGGACAATAAATAAATCAAGCTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8691931 62 + 9889416 GTGTTGCTTCTGGGGCCCAGGTTCTACTTA-GGTGATGGAGGCACAATAAATAAATCAAGCTG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20720402 59 - 38779656 GTGTTACTTCTGGGGCCCAGTTTCTACTCATGGTGATGGAGGAGAAATAAATAaagccc---- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781190 59 + 39895921 ATATTACTTCTGAGGCCCAGTTTCTACTCATAGTGATGGAA----AAGGAATAAGTCAAGCCC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3525626 61 - 6883506 GTGTTAAATCTGGGGCCCAGTTTATACTCAAGGTGTTGGAGGAAAGGTga--gaatcaagccc i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19155052 691 + 47401472 I e mm10.chr16 78091491 552 + 98207768 I a score=498572.000000 s hg38.chr21_KI270874v1_alt 14673 37 + 166743 CACTGCACAAGCA--------CATTTTGTACAACTGCTTTCATCA s panTro5.chr21 3631056 37 + 33445071 CACTGCACAAGCA--------CATTTTGTACAACTGCTTTCATCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266344 37 + 46275980 CACTGCACAAGCA--------CATTTTGTACAACTGCTTTCATCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205013 37 - 13858734 CACTGCACAAGCA--------CATTTTGTACAACTGCTTTCATCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393082 37 + 32716333 CACTGCACAAGCA--------CATTTTGTACAACTGCTTTCATCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348394 37 - 185818997 cactacacaagca--------catcttgtgcaactgctttcatca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171097 37 - 192294377 CACTACACAAGCA--------CATCTTGTGCAACTGCTTTCATCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649109 37 + 9440265 cactacacaagca--------catcttgtgcaactgctttcatca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380168 37 + 21915920 cactacacaagca--------catcttgtgcaactgctttcatca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956551 37 - 90373283 CACTACACAAGCA--------CATCTTGTGCAACTGCTTTCATCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2121880 37 + 4234846 CACTACACAAGCA--------CATCCTGTGCAACTGCTTTcatca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128014 37 - 13750039 CACTACACAAGTA--------CATTTTGTGCAActgctttcatca i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21883301 37 + 50472720 CACTACACAAGCA--------CATTTTGTGCAACTGCTCACATCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994116 37 + 13128814 CACTGCACAAGCA--------CATTTTGTACAACTGCTTACATCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9568677 37 - 14377064 CACTGCACAAGCA--------CATTTTGTACAACTGCTTacgtca i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8691993 45 + 9889416 CACTGCACAAGCACATTTTGTCATTTTGTACAACTGCTTACCTCA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19155743 37 + 47401472 CACTGCACAAGCA--------CATTTCATGCAACTGCTTTTATCA i micMur3.chr31 I 691 I 112 s otoGar3.GL873528 20720461 36 - 38779656 cactgcaccagca--------catttcatgccactgc-ttcatca i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781249 29 + 39895921 CACTAGATAAGCA--------CATTTTGTGCTACTAC-------- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3525687 37 - 6883506 cactgcacaggca--------cattttggggtagtaattacatca i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78091491 552 + 98207768 I a score=933890.000000 s hg38.chr21_KI270874v1_alt 14710 87 + 166743 CATCTGCTAACATTGTTTTGGC-AAAGCAAATCATATGAACAAACACAACATCAGGGT-----------------G-------------------------C-----------------------AGCCCCAGAGGAGGCTGTGAGTGCATAT s panTro5.chr21 3631093 88 + 33445071 CATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAACAAACACAACATCAGGGT-----------------G-------------------------C-----------------------AGCCCCAGAGGAGGCTGTGAGTGCATAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266381 88 + 46275980 CATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAACAAACACAACATCAGGGT-----------------G-------------------------C-----------------------AGCCCCAGAGGAGGCTGTGAGTGCATAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205050 88 - 13858734 CATCTGCTAACATTGTTTTGGCAAAAGCAAATGATATGAACAAACCCAACATCAGGGT-----------------G-------------------------C-----------------------AGCCCCAGAGGAGGCTGTGAGTGCATAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393119 87 + 32716333 TATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAACAAACCCAACATTGGGG------------------G-------------------------C-----------------------AGCCCCAGAGGAGGCTGTGAATGCATAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348431 88 - 185818997 catctgctaacattgttttggcaaaagcaaatcatatgagcaaacccgacatcagggg-----------------g-------------------------c-----------------------agCCCAAGATGAGGCCGTGAATGCATAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171134 88 - 192294377 CATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAGCAAACCCGACATCAGGGG-----------------G-------------------------C-----------------------AGCCCAAGATGAGGCCGTGAATGCATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649146 88 + 9440265 catctgctaacattgttttggcaaaagcaaatcatatgagcaaacccgacatcagggg-----------------g-------------------------c-----------------------agcccaagatgaggccgtgaatgcATAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380205 87 + 21915920 catctgctaacattgttttggcaaaagcaaatcatatgagcaaacccgacatc-gggg-----------------g-------------------------c-----------------------agcccaagatgaggccgtgaatgcATAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956588 88 - 90373283 CATCTGCTAACATTGTTTTGGCAAAAGCAAATCATATGAGCAAACCTGACATCAGGGG-----------------G-------------------------T-----------------------AGCCCAAGATGAGGCCGTGAATGCATAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2121917 88 + 4234846 catctgctaacattgttttggcaaaagcaaatcatatgagcaaacccgacatcagggg-----------------g-------------------------c-----------------------agCCCAAGATGAGGCTGTGAATGCATAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128051 87 - 13750039 catctgctaacattgttttggccaaagcaaatcatatgaacaaaaccgacatc-gggg-----------------g-------------------------c-----------------------agCCCAAGATGAGGCCATGAATGCATAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21883338 87 + 50472720 CATCTTCTAACATCCCTTTGGCAAAAGCAAATCATATGAACAAACCCAGCATCAGGGG-----------------G-------------------------C-----------------------AGCCTGAGACGAGG-TGTGAATGCATGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994153 88 + 13128814 CATCTGCTAACATCCCTTTGGCAAAAGCAAATCATATGAACAAACCCAACATCAGGGG-----------------G-------------------------C-----------------------AGCCTGAGACGAGGCTGTGAATCCATGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9568714 88 - 14377064 catctgctaacatccctttggcaaaagcaaatcatatgaacaaacccaacatcagggg-----------------g-------------------------c-----------------------agCCTGAGACAAGGCTGTGAATGCATGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692038 88 + 9889416 CATCTGCTAACATCCCTTTGGCAAAAGCAAATCATATGAACAAACCCAACATCAGGGG-----------------G-------------------------C-----------------------AACCTGAGACGAGGCTGTGAATGCATGT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20720497 110 - 38779656 catccgctaacatccttttgacaaaagcaagtcctacagacaaacccaACCTCAGGGGCAGCAAAAGATATTCTAG-------------------------C------------------TCTTGAGCCAGAGACAAGGCTGTGAGTGCAAGG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781278 90 + 39895921 ---------------------CAAAAGAAAGCC--ATGGACAAACTCAAATTCAGAGG-----------------GTCAGGGAAATACATTCTACCCGTATC-----------------------ACCTCTAGACAAGGCTTTGAAAGCACAG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3525724 111 - 6883506 tgtctgctaacattctttcagcaaaatcaagtcatatggacaaacccaattaagaggg-----------------a-------------------------caaggaaatacatttcaccccatgaGTTCATAACTATGCTTTGAATGCATAG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19155780 112 + 47401472 I e mm10.chr16 78091491 552 + 98207768 I a score=668090.000000 s hg38.chr21_KI270874v1_alt 14797 50 + 166743 TATCATGACAAGGAAGTGAAGAGTTGTGACCAATAGGTCAAATACTATag s panTro5.chr21 3631181 50 + 33445071 TATCATGACAAGGAAGTGAAGAGTTATGACCAATAGGTCAAATACTATAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266469 50 + 46275980 TATCATGACAAGGAAGTGAAGAGTTATGACCAATAGGTCAAATACTATAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205138 50 - 13858734 TATCATGACAAGGAAGTGAAGAGTTGTGACCAATAGGCCAAATACTATAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393206 50 + 32716333 TATCATGACAAGGAAGGGAAGAGTTGTGACCAATAGGTCAAATACTATAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348519 50 - 185818997 TATCACGACAAGGAAGTGAACAGTTGTAAccaataggtcaaatactagag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171222 50 - 192294377 TATCACGACAAGGAAGTGAACAGTTGTAACCAATAGGTCAAATActagag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649234 50 + 9440265 TATCACGACAAGGAAGTGAACAGTTGTAACCAATGGGTCAAATActagag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380292 50 + 21915920 TATCACGACAAGGAAGTGAACAGTTGTGAccaataggtcaaatactagag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956676 50 - 90373283 TATCACGACAAGGAAGTGAACAGTTGTGACCAATAGGTCAAATActagag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2122005 50 + 4234846 TATCACGACAAGGAAGTGAACAGTTGTGAccaataggtcaaatactagag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128138 50 - 13750039 TATCATGACAAGGAAGTGAACAGTTGTGACCAGCAGGTCAAATActagag i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21883425 50 + 50472720 TATCATGACAAGGAGGTGAAGAGCTGTGATCAATAAGTCAAATGCTATag i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994241 50 + 13128814 TATCATGACAAGGAAGTGAAGAGTTGTGATCAATAAGTCAAATGCTATag i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9568802 50 - 14377064 TATCATGACAAGGAATTGAAAAGCTGTGATCAATAAGTCAAATGCTATAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692126 50 + 9889416 TATCATGACAAGGAAGTGAAGAGCTGTGATCAATAAGTCAAATGCTATag i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19155892 50 + 47401472 TATCATTACAAGGAAGTAAAGAGTTGGGACCAATAGTTCAAATACCATAG i micMur3.chr31 I 112 I 131 s otoGar3.GL873528 20720607 50 - 38779656 TATCATTACAAGGGAGTGAAGAGTTACAACCAATAAGCCAAATAccatgg i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781368 50 + 39895921 AATCAATTCAAGGGAGTGACAAGTTGTGACTAATAAGTCAAATGCCATGG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3525835 49 - 6883506 TACTAATAGTAGT-AGTGAAAAGTTGTGACCAATAATTCGACTACCACag i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78091491 552 + 98207768 I a score=1661966.000000 s hg38.chr21_KI270874v1_alt 14847 137 + 166743 aataacaaccagttctcatttatctttatgtgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtatgaagaatgaatg-CTCTGACACTGCTGATAGTGTTCCCACACTCATTCGTTC s panTro5.chr21 3631231 137 + 33445071 AATAACAACCAGTTCTCATTTATCTTTAtgcgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtaagaagaatgaatg-CTCTGACACTGCTGATAGTGTTCCCACACTCATTCGTTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266519 137 + 46275980 AATAACAACCAGTTCTCATTTATCTTTAtgcgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtaagaagaatgaatg-CTCTGACACTGCTGATAGTGTTCCCACACTCATTCGTTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205188 137 - 13858734 AATAACAAACAGTTCTCATTTATCTTTATGTGTATATCCAGTGCCTGGGACTATACTCGA-CCATTGTGAGTCCTCAAGACGTGTATGAAGAACGAATG-CTCTGACACTGCTGATAGTGTTCCCACACTCATTCGTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393256 136 + 32716333 AATAAC-ACCACTTCTCATTTATCTTTATTtgtgtatccagtgcctgggactatacttga-ctattgtgagtcctcaagatatgtatgaagaatgaatg-CTCTGATACTGCTGATAGTGTTCCCACACTCATTCGTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348569 137 - 185818997 aataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171272 137 - 192294377 aataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649284 137 + 9440265 aataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380342 137 + 21915920 aataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956726 137 - 90373283 aataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtctgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCAACACTCATTCGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2122055 137 + 4234846 aataacaaccacttctcatttatctttatttgtatatccagtgcctgggactatacttga-ccattgtgagtccccaagacatgttggaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128188 137 - 13750039 aataacaaccacttctcatttatctttatttgcatatccagtgcctgggactatacttga-ccattgtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTGATAGGGTTCCCACACTCATTCGTGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21883475 136 + 50472720 aataacaaccatttcccatttatctttatttgtctatccagtgcctgg-aacaaacttaa-ccatagtgagtcctcaagacgtgtttgaagaatgaatg-CTCTGATACTGCTAATAGTGTTCCCACACTCATTTGTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994291 137 + 13128814 aataacaaccatgtcccatttatctttatttatatatccagtgcctggaaacgaatttaa-ccatagtgagtcctcaagacatatttgaagaatgaatg-CTCTGATACTGCTAATAGTGTTCCCACACTCATTTGTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9568852 136 - 14377064 AA-AACAaccatttcccatttatctttatttgtatatccagtgcctggaaccaaacttaa-ccatagtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTAATAGTGTTCCCACACTCATTTGCTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692176 137 + 9889416 aataacaaccatttcccatttatctttatttgtatatccagtgcctcaaaccaaacttaa-ccatagtgagtcctcaagacatgtttgaagaatgaatg-CTCTGATACTGCTAATAGTGTTCCCACACTCATTTGTTT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20720657 129 - 38779656 --gggggaccactttttactcatttctatttgtataaccaatgcctggaactgtacttaa-ccatcgtgagtcctcaagatgtgtttgaagaacaaatgTCTCTCATACTGCTGACGGTGTTAC--CATTGATT----- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781418 138 + 39895921 AATAAAAACCATCT-TTACTCATCTTTACTTATACATAcaatgtctggaattgtacttaacccatagaaagtactcaaaatatacttggtgaatgaatgTCTCTGATACTGCTAACCATGTTCCTGCATTCATTCATTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3525884 138 - 6883506 aatagaaatgatttcttactcatccttattagtatatccaatttctagaactatacttag-ccataatgagtactcaacacatgtttgaagaatgagtgaCTCTGATACTGCTAACAGTGTCCCCATGCTAATCCATTT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19155942 131 + 47401472 I e mm10.chr16 78091491 552 + 98207768 I a score=884372.000000 s hg38.chr21_KI270874v1_alt 14984 62 + 166743 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC s panTro5.chr21 3631368 62 + 33445071 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266656 62 + 46275980 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205325 62 - 13858734 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393392 62 + 32716333 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348706 62 - 185818997 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171409 62 - 192294377 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TCGAACTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649421 62 + 9440265 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGGAACACAGGATG---TTGAACTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380479 62 + 21915920 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956863 62 - 90373283 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2122192 62 + 4234846 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128325 62 - 13750039 TGTGAGGCATACTCCAAACCACATCAAACTACCAAAGATTTGAAACACAGGATG---TTGAACTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21883611 62 + 50472720 CATGAGGCATACTCCAAACAACATCAAATTACAAAACATTTGGAAGACAGGATG---ATGAACTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994428 62 + 13128814 TGTGAGGCATACTCCAAACAACATCAAACTACCAAAGATTTGGAAGACAGGATG---GTGAACTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9568988 62 - 14377064 TGTGAGGCATACTCCAAACAATATCAAACTACCAAAGATTTGGAAGACAGGATG---GTGAACTC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692313 62 + 9889416 TGTGAGGCATACTCCAAATAACAACAAACTACCAAAGATTTGGAAGACAGGATG---GTGAACTC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19156073 62 + 47401472 TGTGAGACATTCTCTAAGCCATATCAAAGCACCAAAGATTTGAAAGACAGGATG---ATGAACTC i micMur3.chr31 I 131 I 16 s otoGar3.GL873528 20720786 61 - 38779656 -TTGAGGCATTCTCCAAACCACATAAAAAAAGCAAAGATTTGAAAGACAGAATG---ATGAACTC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781556 62 + 39895921 TATAAAGCATACTCCAAATCACATGAAACTGACAAAGATTTGAAAGAGAGAATG---ATGAAGTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3526022 65 - 6883506 TACAGGGCATAAGCAAAACCACATCAAACCGCCAAAGTTTTGAGGGTGAGGATGATAGTGAACTG i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78091491 552 + 98207768 I a score=154033.000000 s hg38.chr21_KI270874v1_alt 15046 16 + 166743 CCCAATTATATTTATC s panTro5.chr21 3631430 16 + 33445071 CCCAATTATATTTATC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266718 16 + 46275980 CCCAATTATATTTATC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205387 16 - 13858734 TTCAATTATATTTATC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393454 16 + 32716333 TTCAATTATATTTATC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348768 16 - 185818997 TTCATTTCTATTTATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171471 16 - 192294377 TTCATTTCTATTTATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649483 16 + 9440265 TTCATTTCTATTTATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380541 16 + 21915920 TTCATTTCTATTTATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956925 16 - 90373283 TTCAATTCTATTTATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2122254 16 + 4234846 TTCATTTCTATTTATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128387 16 - 13750039 TTCAATTCTATTTATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21883673 16 + 50472720 TTCAATTCTATTTATT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994490 16 + 13128814 TTCAATTCTATTTATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9569050 16 - 14377064 TTCAGTTCTATTTATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692375 16 + 9889416 TTCAATTCTATTTATT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20720847 16 - 38779656 TTCATTTCAATTTACT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781618 15 + 39895921 TTCACTTA-ATTTACT i canFam3.chr31 C 0 I 7 s dasNov3.JH568778 3526087 16 - 6883506 CCCAGCAAAGTATAGT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19156135 16 + 47401472 I e mm10.chr16 78091491 552 + 98207768 I a score=4176590.000000 s hg38.chr21_KI270874v1_alt 15062 338 + 166743 GAGACATTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCGTTtgtggtatattgtt-ttccaaaatgcctacaacgatacctcctttcccatgtgtgcctttgcaataggaccatgccacccatcccagcaaggggtacagtctgtttctaccttccttcaatctaggatatccttgcgacttgcttgaccagtagaatgtggtggaagtgaccctatg-cagttatgggtctacgtc-ttaagaggtcttgcaa s panTro5.chr21 3631446 338 + 33445071 GAGACATTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGACTTAGA---------CATGGAATTTATTCATTTCCGTTtgtggtatattgtt-ttccaaaatggctacaacgatacctcctttcccatgtgtgcctttgcaataggaccatgccacccatcccagcaaggggtacagtctgtttctaccttccttcaatctaggaaatccttgtgacttgcttgaccagtagaatgtggtggaagtgaccctatg-cagttatgggtctacgtc-ttaagaggtcttgcaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17266734 338 + 46275980 GAGACATTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCGTTtgtggtatattgtt-ttccaaaatggctacaacgatacctcctttcccatgtgtgcctttgcaataggaccatgccacccatcccagcaaggggtacagtctgtttctaccttccttcaatctaggaaatccttgtgacttgcttgaccagtagaatgtggtggaaatgaccctatg-cagttatgggtctacgtc-ttaagaggtcttgcaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205403 338 - 13858734 AAGACATTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCATTtgtggtatattgtt-ttccaaaatggctacaacaataccttctttcccatgtatgtctttacaataggaccatgccacccatcccagcaaggggtacagtctgtttctaccttccttcaatctaggatatccttgcgacttgcttgaccagtagaatgtggtggaagtgaccctatg-cagttatgggtctacgtc-ttaagaggtcttgcaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393470 308 + 32716333 GAGACATTCAACAGCTTCCAAACAGAAACACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCTGTTtgtagtatattgtt-ttccaaaatggctacaacaatacctcctttc---------------caataggaccatgccacccatcccagcaaagggtacagtctatttctaccttccttcaatctaggatatccttgcgacttgcttgaccagtagaatgtggtggaagtgaccctatg-cagatatgggtctacgtc-t--------------- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155348784 322 - 185818997 GAGACACTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCATTTGGGGCCTattgtt-ttccaaaatggctacaacaatacctcctttcccacacgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttctccaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatg-cagttatgggtctacaat----------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171487 322 - 192294377 GAGACACTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCATTTGGGGCCTattgtt-ttccaaaatggctacaacaatacctcctttcccacacgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttctccaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatg-cagttatgggtctacaat----------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649499 322 + 9440265 GAGACACTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCATTTGGGGCCTattgtt-ttccaaaatggctacaacaatacctcctttcccacacgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttctccaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatg-cagttatgggtctacaat----------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380557 322 + 21915920 GAGACACTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCATTTGGGGCCTattgtt-ttccaaaatggctacaacgatccctcctttcccacgtgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttcttcaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatg-cagttatgggtctacaat----------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14956941 321 - 90373283 GAGACATTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACACAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCATTtgtggcctattgtt-ttccaaaatggctacaacaatacctcctttcccacatgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttcttcaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatg-cagttatgggtctacaa------------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2122270 338 + 4234846 GAGACACTCAACAGCTTCCAAACAGAAATACAAAGATAGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAGAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCATTGGGGGCCTattgtt-ttccaaaatggctacaacaatacctccttccccacgtgcccctttgcaataggaccatgccacccatcccagcaagggatacagtctatttctacatttcttcaatctaggatatccttgcaacttgcttgaccagtagcatatggtggaagtgaccctatg-cagttatgggtctacaat-ttaagaggtcttgcaA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128403 322 - 13750039 GAGACATTCAACAGCTTCCAAACAGAAATACAAAGATGGAGATTTTCATACAGTAAACTGTTAGGTTATAATTTGGG---------CAGAAAAACATAAAGTTGTAGCCTTAGA---------CATGGAATTTATTCATTTCCATTtgtggcatattgtt-ttccaaaatggctacaacaatacctcctttcccacgtgcccctttgcaataggaccatgccacccatcccagcaagggatgcagtctatttctacattccttcaatctaggatatccttgcaacttgcttgaccagtagcatgtggtggaagtgaccctatg-ccgttatgggtctacatc----------------- i colAng1.NW_012120598v1 C 0 I 1 s calJac3.chr21 21883689 331 + 50472720 GAGACATTCTACAGCTTCCAAACAGAAATACAAAGATATAGATTTTCATATAGTAAACTGTTAGTTTATAATTTGGG---------CAGAAAAGCATAAAGTTGTAGCCTTAGA---------CATGCAATTTATTCATTTCTGTTtgtggtatattgtt-ttccaaaatggctacaataatacctgctttcccatgtgctcctttgcaatagaattgtggcacccattctagcaaggggtacagtctacttttac-ttccttcaatctaggatatccttgcaacttgcttgaccagtagaat---atggaagtgaccctatg-cagttacacatctgtgtc-ttaagaggtcttA--- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994506 334 + 13128814 GAGACATTCAACAGCTTCCAAACAGAAATACAAAGATATAGATTTTCATAGAGTAAACTGTTAGTTTATAATTTGGG---------CAGAAGAGCATAAAGTCGTAGCCTTAGA---------CATGAAATTTATTCATTTCTGTTtgtggtatattgtt-ttccaaaatggctacaataatacctgctttcccacacgttcctttgcaatagaactgtggcatccatcctagcaaggggtacggtctatttttac-ttccttcaatctaggatatccttgcaacttgcttgaccagtagaatgtggtggaagtgaccctatg-cacttatgggtctgtgtc-ttaagagGTCTAA--- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9569066 333 - 14377064 GAGACATTCAACAGCTTCCAAACAGAAATACAAAGATATAGATTTTCATATGGTAAAC----AGTTTATAATTTGGG---------CAGAAGAGCATAAAGTTATAGCCTCAGA---------CATGAAATTTATTCATTTCTGTTtgtggtatattgtt-ttccaaaatggctacaataatacctgctttcccatgtgctcctttgcaatagaactgtggcacccatcctagcaaggggtacagtctatttttac-ttccttcaatctaagatatccttgcaatttgcttgaccagtagaatgtggtggaagtgaccctatg-cacctatgggtctgtgtc-ttaagaggtcttgcaA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692391 335 + 9889416 GAGACATTCAACAGCTTCCAAACAGAAATACAAAGATATAGATTTTCATATAGTAAACTGTTAGTTTATAATTTGGG---------CAGAAAAGCAT--AGTTGTAGCCTTAGA---------CATGAAATTTATTGATTTATGTTtgtagtatattgtt-ttccaaaatggctacaataatacctgctttcctatgtgctcctttgcaatagaactgtggcacccatcctagcaaggggtacagtctatttttac-ttccttcaacctaggatatccttgcaacttgcttgaccagtagaatgtggtggaagtgaccctatg-cagttatgggtctgtgtc-ttaagaggtcttgcaA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19156151 336 + 47401472 GAGACATCCAACAGCTCCCAAACAGAAATACAAAGATACAGATTTTTATACAATAAACTACTAGGTTATAATTTAGA---------TAGAGGAGTGTAGTGTAGTAGCCTGAGA---------AATGTAATTCATTCATTTGGGTTtgtggtgtaccgtt-tcccaaaacagctataacaatccctcctttcccgtgtgcccctttgcaatgggactatgccactcctcccaccaa-gggtagagtctatttccactttccttgaatctaggatattctcgtgacttgcttgacctgtaaaatagagcagaagt-accctgtg-cagttatgggtctacatc-ttaagaagtcttacaa i micMur3.chr31 I 16 I 164 s otoGar3.GL873528 20720863 324 - 38779656 GAGACATTCAACAGCTCCCAAACAGAAATGCAAAGATACAAATTTTCATACCCTAAAATGCTGGGTTATAATTTGGA---------CAAAGAAGCACAGCCTGGTAGCCTGAGAACTGTAATGAATGTAATTCATTCACTGGTGTTtgtggtgtactgtt-tcccaaactggctggaacaatccctccttccccacgtgcccctttgccatagcactaggccactcctcccatcaaggggcagagtctatttcca-tttttttgaatctaagatattctcatgacttgtttgacctgtag--------------------ttg-cagttatgggtct--gtc-ataagaggtcttacaa i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781640 310 + 39895921 GAGACATTCAATAGATCCCAAACAG-------------TATGTATTCATACAGTGAACTGCCAGGTTATAATTTGGG---------CAAAGGAGTATATAGTAGTGGCCTTAAA---------AATGTAACTCATTCATTTGTGTTtgtagtatattgtt-ttccaacatggccacaacaattgttcccttcctatgtgttccttagcaatgtgactataccactcctcctatcaaag-----agtgtatgtttac--tctttggatgtaggatatcttcatgatttgtttaaccagtaaaatatggcacaagtgagccagtg-cacaagtgagccagtgcaattaagag--------- i canFam3.chr31 I 7 C 0 s dasNov3.JH568778 3526103 347 - 6883506 CAGATATTTGATAGCTCCCAAATAAGAATGCAAAGATATAAACTTTAAAACAGTTAATTGCTAGGGTATAATTTGAGAGGGAGGCTTGGGAGAGCACATAGAAGAAGCCTTAGA---------AATGCAATTCATTCATTTGTGTTTGTGTTATATTGTTCCccccaattgactgcaacagtccttcctttctcatcagccgctttgcagtgtgactatgccacacctcccatcaaaaggtagagtctacttccaccctccttatatctggtatattctcatgatttgccttaccagtgcaattcggtagaagtgaccctgtgccagttaagggcccatgtc-ttaag--gtcttgcaa i dasNov3.JH568778 C 0 I 3 e mm10.chr16 78091491 552 + 98207768 I a score=2997.000000 s hg38.chr21_KI270874v1_alt 15400 1 + 166743 t s panTro5.chr21 3631784 1 + 33445071 t i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267072 1 + 46275980 t i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205741 1 - 13858734 t i gorGor5.CYUI01015003v1 C 0 C 0 s manLeu1.NW_012102865v1 2122608 1 + 4234846 T i manLeu1.NW_012102865v1 C 0 I 2018 s cebCap1.NW_016107322v1 9569399 1 - 14377064 T i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692726 1 + 9889416 T i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20721187 1 - 38779656 c i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781950 1 + 39895921 t i canFam3.chr31 C 0 I 5 s dasNov3.JH568778 3526453 1 - 6883506 t i dasNov3.JH568778 I 3 C 0 e micMur3.chr31 19156487 164 + 47401472 I e saiBol1.JH378168 4994840 0 + 13128814 C e calJac3.chr21 21884020 0 + 50472720 C e mm10.chr16 78091491 552 + 98207768 I e colAng1.NW_012120598v1 128725 1 - 13750039 I e cerAty1.NW_012002954v1 8380879 0 + 21915920 C e macNem1.NW_012019910v1 8649821 0 + 9440265 C e chlSab2.chr2 14957262 0 - 90373283 C e macFas5.chr3 162171809 0 - 192294377 C e rheMac8.chr3 155349106 0 - 185818997 C e nomLeu3.chr25 4393778 0 + 32716333 C a score=-3913.000000 s hg38.chr21_KI270874v1_alt 15401 5 + 166743 atttt s panTro5.chr21 3631785 5 + 33445071 atttt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267073 5 + 46275980 atttt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205742 5 - 13858734 atttt i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155349106 1 - 185818997 a---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171809 1 - 192294377 a---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649821 1 + 9440265 a---- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380879 1 + 21915920 t---- i cerAty1.NW_012002954v1 C 0 C 0 s cebCap1.NW_016107322v1 9569400 5 - 14377064 ATTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692727 5 + 9889416 ATTTT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20721188 4 - 38779656 -tttt i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3526454 5 - 6883506 atttt i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19156487 164 + 47401472 I e saiBol1.JH378168 4994840 0 + 13128814 C e calJac3.chr21 21884020 0 + 50472720 C e canFam3.chr31 13781951 5 + 39895921 I e mm10.chr16 78091491 552 + 98207768 I e colAng1.NW_012120598v1 128725 1 - 13750039 I e manLeu1.NW_012102865v1 2122609 2018 + 4234846 I e chlSab2.chr2 14957262 0 - 90373283 C e nomLeu3.chr25 4393778 0 + 32716333 C a score=3785.000000 s hg38.chr21_KI270874v1_alt 15406 1 + 166743 t s panTro5.chr21 3631790 1 + 33445071 t i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267078 1 + 46275980 t i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205747 1 - 13858734 t i gorGor5.CYUI01015003v1 C 0 C 0 s chlSab2.chr2 14957262 1 - 90373283 t i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2124627 1 + 4234846 t i manLeu1.NW_012102865v1 I 2018 C 0 s cebCap1.NW_016107322v1 9569405 1 - 14377064 T i cebCap1.NW_016107322v1 C 0 I 204 s aotNan1.NW_018487195v1 8692732 1 + 9889416 T i aotNan1.NW_018487195v1 C 0 I 202 s otoGar3.GL873528 20721192 1 - 38779656 t i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781956 1 + 39895921 c i canFam3.chr31 I 5 C 0 s dasNov3.JH568778 3526459 1 - 6883506 t i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19156487 164 + 47401472 I e saiBol1.JH378168 4994840 0 + 13128814 C e calJac3.chr21 21884020 0 + 50472720 C e mm10.chr16 78091491 552 + 98207768 I e colAng1.NW_012120598v1 128725 1 - 13750039 I e cerAty1.NW_012002954v1 8380880 0 + 21915920 C e macNem1.NW_012019910v1 8649822 0 + 9440265 C e macFas5.chr3 162171810 0 - 192294377 C e rheMac8.chr3 155349107 0 - 185818997 C e nomLeu3.chr25 4393778 0 + 32716333 C a score=7491.000000 s hg38.chr21_KI270874v1_alt 15407 2 + 166743 ct s panTro5.chr21 3631791 2 + 33445071 ct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267079 2 + 46275980 ct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205748 2 - 13858734 ct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393778 1 + 32716333 -t i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349107 1 - 185818997 -t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171810 1 - 192294377 -t i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649822 1 + 9440265 -t i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380880 1 + 21915920 -t i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14957263 2 - 90373283 tt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2124628 2 + 4234846 tt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128726 1 - 13750039 -t i colAng1.NW_012120598v1 I 1 C 0 s canFam3.chr31 13781957 2 + 39895921 tt i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3526460 2 - 6883506 tt i dasNov3.JH568778 C 0 I 27010 e micMur3.chr31 19156487 164 + 47401472 I e otoGar3.GL873528 20721193 0 - 38779656 C e aotNan1.NW_018487195v1 8692733 202 + 9889416 I e cebCap1.NW_016107322v1 9569406 204 - 14377064 I e saiBol1.JH378168 4994840 0 + 13128814 C e calJac3.chr21 21884020 0 + 50472720 C e mm10.chr16 78091491 552 + 98207768 I a score=274930.000000 s hg38.chr21_KI270874v1_alt 15409 38 + 166743 aagaggtcttgcaatatttttcttagtttctgcagaat s panTro5.chr21 3631793 38 + 33445071 aagaggtcttgcaatatttttcttagtttctgcagaat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267081 38 + 46275980 aagaggtcttgcaatatttttcttagtttctgcagaat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205750 38 - 13858734 aagaggtcttgcaatatttttcttagtttctgcagaat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393779 38 + 32716333 aacaggtcttgcaatatttttcttagtttctgcagaat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349108 38 - 185818997 aagaggtcttgcaatatttttcttagtttctgcagaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171811 38 - 192294377 aagaggtcttgcaatatttttcttagtttctgcagaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649823 38 + 9440265 aagaggtcttgcaatatttttcttagtttctgcagaat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380881 38 + 21915920 aagaggccttgcaatatttttcttagtttctgcagaat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14957265 38 - 90373283 aagaggtcttgcaatatttttcttagtttctgcagaat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2124630 38 + 4234846 aagaggtcttgcaatatttttcttagtttctgcagaat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128727 38 - 13750039 aagaggtcttgcaatatttttcttagtttctgcagaat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884020 28 + 50472720 ----------ACAATATTTTTGTTAGTTTCTGCAGAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994840 27 + 13128814 ----------ACTA-ATTTTTGTTACTTTCTGAAGAAT i saiBol1.JH378168 C 0 C 0 s otoGar3.GL873528 20721193 14 - 38779656 ------------------------cttttctgtcagaa i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781959 38 + 39895921 aaaaagtcttgtaactttggcttttgttccttcagaat i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3526462 27010 - 6883506 I e micMur3.chr31 19156487 164 + 47401472 I e aotNan1.NW_018487195v1 8692733 202 + 9889416 I e cebCap1.NW_016107322v1 9569406 204 - 14377064 I e mm10.chr16 78091491 552 + 98207768 I a score=127663.000000 s hg38.chr21_KI270874v1_alt 15447 14 + 166743 tttatcttttacat s panTro5.chr21 3631831 14 + 33445071 tttatcttttacat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267119 14 + 46275980 tttatcttttacat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205788 14 - 13858734 tgtatgttttacat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393817 14 + 32716333 gttatcttttacat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349146 14 - 185818997 tttatcttttacat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171849 14 - 192294377 tttatcttttacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649861 14 + 9440265 tttatcttttacat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380919 14 + 21915920 tttatcttttacat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14957303 14 - 90373283 tttatcttttacat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2124668 14 + 4234846 tttatcttttacat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128765 14 - 13750039 tttatcttttacat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884048 14 + 50472720 TTTATCTTTTACAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4994867 14 + 13128814 TTTGTCTTTTACAT i saiBol1.JH378168 C 0 I 170 s otoGar3.GL873528 20721207 14 - 38779656 tgcaccttttacat i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13781997 13 + 39895921 t-catctttcatgt i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3553472 14 - 6883506 TTCAACCTTCAGgt i dasNov3.JH568778 I 27010 C 0 e micMur3.chr31 19156487 164 + 47401472 I e aotNan1.NW_018487195v1 8692733 202 + 9889416 I e cebCap1.NW_016107322v1 9569406 204 - 14377064 I e mm10.chr16 78091491 552 + 98207768 I a score=128889.000000 s hg38.chr21_KI270874v1_alt 15461 11 + 166743 aaagaaacaca s panTro5.chr21 3631845 11 + 33445071 aaagaaacaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267133 11 + 46275980 aaagaaacaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205802 11 - 13858734 aaagaaacaca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393831 11 + 32716333 aaagaaacatg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349160 11 - 185818997 aaagaaacatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171863 11 - 192294377 aaagaaacatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649875 11 + 9440265 aaagaaacatg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380933 11 + 21915920 aaagaaacatg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14957317 11 - 90373283 aaagaaacatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2124682 11 + 4234846 aaagaaacatg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128779 11 - 13750039 aaagaaacatg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884062 11 + 50472720 AAAGAAACTCA i calJac3.chr21 C 0 I 163 s saiBol1.JH378168 4995051 11 + 13128814 aaagaaactca i saiBol1.JH378168 I 170 C 0 s cebCap1.NW_016107322v1 9569610 11 - 14377064 Aaagaaactca i cebCap1.NW_016107322v1 I 204 C 0 s aotNan1.NW_018487195v1 8692935 11 + 9889416 aaagaaactca i aotNan1.NW_018487195v1 I 202 C 0 s otoGar3.GL873528 20721221 11 - 38779656 aaagaaattca i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13782010 11 + 39895921 aaagaaactca i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3553486 11 - 6883506 aaagaagttca i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19156487 164 + 47401472 I e mm10.chr16 78091491 552 + 98207768 I a score=1092031.000000 s hg38.chr21_KI270874v1_alt 15472 95 + 166743 ggcaagacaactgaa----taatgagcaaccatgtga--agagagccaagacacatggaggaggaccaaaagacccta-ccagcattcaccaccag--------------tagacc s panTro5.chr21 3631856 95 + 33445071 ggcaagacaactgaa----taatgagcaaccatgtga--agagagccaagacacatggaggaggaccaaaagaccctg-ccagcattcaccaccag--------------tagacc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267144 95 + 46275980 ggcaagacaactgaa----taatgagcaaccatgtga--agagagccaagacacatggaggaggaccaaaagaccctg-ccagcattcaccaccag--------------tagacc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205813 95 - 13858734 ggcaagacaactgaa----taatgaacaaccatgtga--agagagccaagacacatggaggaggaccaaaagaccctg-ccagcattcaccaccag--------------tagacc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393842 95 + 32716333 ggcaagacaactgaa----tgatgagcaaccatgtga--agagagccaagacacatggaggaggacaaaaagaccctg-ccaacattcaccaccag--------------tagacc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349171 95 - 185818997 ggtgagacaactgaa----tgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactg-ccaacattcaccaccag--------------cagacc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171874 95 - 192294377 ggtgagacaactgaa----tgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactg-ccaacattcaccaccag--------------cagacc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649886 95 + 9440265 ggtgagacaactgaa----tgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactg-ccaacattcaccaccag--------------cagacc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8380944 95 + 21915920 ggtgagacaactgaa----tgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactg-ccaacattcaccaccag--------------cagacc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14957328 95 - 90373283 ggtgagacaactgaa----tgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactg-gcaacattcactaccag--------------cagacc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2124693 95 + 4234846 ggtgagacaactgaa----tgatgagcgaccatgtga--agagagccaagacacttggaggaggaccaaaagacactg-ccaacattcaccaccag--------------cagacc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128790 95 - 13750039 ggcaagacagctgaa----tgatgagcgaccatgtga--agacagccaagacacttggaggaggaccaaaagacactg-ccaacattcaccaccag--------------caggcc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884236 97 + 50472720 ggcaacacaactgaa----tgatgggcgaccacatgaagagagagccaagacacgtggaggaggaccggaagaccctg-gcaacattaatcaccag--------------tggact i calJac3.chr21 I 163 C 0 s saiBol1.JH378168 4995062 97 + 13128814 ggcaacacaactgaa----tgatgggtgaccatgtgaagagagagccaagacacttggaggaggaccgaaagaccctg-ccaacattcatcaccag--------------tggact i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9569621 97 - 14377064 ggcaacacaactgaa----tgatgggtgaccacgtgaagagagagccaagacgcttgtaggaggaccgaaagaccctg-ccagcattcatcaccag--------------tggact i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8692946 98 + 9889416 ggcaacacaactgaa----tgatgggtgaccacgtgaagagagagccaagacacttggaggaggaccgaaagaccctacccaacattcatcaccat--------------tggact i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20721232 95 - 38779656 agcaagacaactgaa----tggtgagagaccatgtga--caagagatatgacatttagaggagagcagagtcaccaca-tcaacattccagcactg--------------tggccc i otoGar3.GL873528 C 0 I 19 s canFam3.chr31 13782021 94 + 39895921 ggcaaaagaactaaa-----aatgagagactacccaa--aaagaggcaagacatctggaaaagaatcaagatgccctg-ccaacattcagaaccaa--------------ggtccc i canFam3.chr31 C 0 I 18 s dasNov3.JH568778 3553497 113 - 6883506 ggcaagacaactgaatgaatgatgagagaccaggtga--agaaagatgagacacatggaggaaaaccaatatgccctg-ccaacattcagcaccaagccctcagaaacatgagacc i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19156487 164 + 47401472 I e mm10.chr16 78091491 552 + 98207768 I a score=2046112.000000 s hg38.chr21_KI270874v1_alt 15567 155 + 166743 atcttggatcccttggcccc-agttgaactttttcagccaataccaggtgaaacagagacaagccgtcccctctgagcactgcctgaattcctcacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggtttat s panTro5.chr21 3631951 155 + 33445071 atcttggatcccttggcccc-agttgaactttttcagccaataccaggtgaaacagagacaagccgtcccctctgagcactgcctgaattcctcacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggtttat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267239 155 + 46275980 atcttggatcccttggcccc-agttgaactttttcatccaataccaggtgaaacagagacaagccgtcccctctgagcactgcctgaattcctcacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggtttat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3205908 155 - 13858734 atcttggatcccttggcccc-agttgaactttttcagccagtacccggtgaaaaagagacaagccgtcccctctgagcactgcctgaattcctcacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggtttat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4393937 155 + 32716333 atcttggatcccttgacccc-agttgaactttttcagccaataccaggtgaaacagagacaagccttccgctctgagcactgcctgaattcctgacccacagaatcatgagt-aatagaaca---g---ttattttaagtttctaag-ttttggagtggtttat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349266 155 - 185818997 atcctggatcccttggtccc-agttgaaatttctcggccaataccaggtgaaacagagacaagccataccctctgcgcactgcctgaattcctgacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggttcat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162171969 155 - 192294377 atcctggatcccttggtccc-agttgaaatttctcagccaataccaggtgaaacagagacaaaccataccctctgcgcactgcctgaattcctgacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggttcat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8649981 155 + 9440265 atcctggatcccttggtccc-agttgaaatttctcagccaataccaggtgaaacagagacaagccataccctctgcgcactgcctgaattcctgacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggttcat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8381039 155 + 21915920 atcctggatcccttcgtccc-agttgaaatttctcagccaataccaggtgaaacagagacaagccataccctctgcgcaccgcctgaattcctgacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggttcat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14957423 155 - 90373283 atcctggatcccttggtctc-agttgaaatttctcagccaataccaggtgaaacagagacaagccataccctctgcgcactgcctgaattcctgacccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggttcat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2124788 155 + 4234846 atcctggatcccttggtccc-agttgaaatttctcagccaataccaggtgaaacagagacaagccataccctctgcgcactgcctgaattcctgccccacagaatcatgagt-aataaaaca---g---ttattttaagtttctaag-ttttggagtggttcat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 128885 155 - 13750039 atcctggatcccttggcccc-agttgaaatttctcagccaataccaggtgaaacaggaacaagccataccctctgcacactgcctgaattcctgacccacagaatcatgagt-aataaaaca---g---tcattttaagtttctaaa-ttttggagtggtttat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884333 155 + 50472720 gtcttggatcccttggcccc-agttgaactttctcagtcaataccacgtgaaacagagacaagccatcccatctgagcactgcctgaattcctgacccacagaattatgagt-aaaaaaaca---g---ttattttaagttccaaag-ttttggagtggtttat i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4995159 156 + 13128814 atcttgggtcccttggcccc-agttgaactttctcagtcaataccaggtgaaacagagacaagccatcctgtctgagcactgcctgaattcctgacccacagaattatgagtaaaaaaaaca---g---ttattttaagtttctaag-ttttggagtggtttat i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9569718 156 - 14377064 atcttggatcccttggcccc-aggtgaactttcgcagtcaataccaggttaaacagagacaagccatcccatctgagcactgcctgaattcctgacccacagatttatgagtaaaaaaaaca---g---ttattttcagtttctaag-ttttggagtggtttat i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8693044 155 + 9889416 atcttggatcccttggcccc-agttgaattttctcagtcaataccaggtgaaacagagacaagccatcccgtctgagcactgcctgaattcctgacccacagaattatgagt-aaaaaaaca---g---ttattataagtttctaag-ttttggagtggtttat i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19156651 155 + 47401472 atcttggatcctttagctcc-aggtgaatctactcaaccaacactaagtgaagcagagatatgctatccactctgagccctgcctgaatttctcccttacataatcaagagt-aataaaaca---g---ttgttttaagctataaag-ttttggagtggtttgt i micMur3.chr31 I 164 C 0 s otoGar3.GL873528 20721346 121 - 38779656 atcttggattctttggctccaaggtgactctacccaaccag---------------------------ccctctgcgctctgcctgaattcctgacttacatagtcatgag---------ca---g---ttgttttaagctgtaaag-ttttggagtggtttat i otoGar3.GL873528 I 19 C 0 s canFam3.chr31 13782133 158 + 39895921 atctttgattcttcagccca-agttaaaccaccccagccaacaccaggtaaaacagagacaagccatccccactgggctctgcttgaattcctgatccacagaatcataaat-aataaaatgtttg---ttattttaagccactaag-ttttagggtggtttat i canFam3.chr31 I 18 C 0 s dasNov3.JH568778 3553610 158 - 6883506 atcttagatacttcaacccc-agttgagcc-accaagtgaacaccaggtaaagcagagacaagtgacccctgctgagctctgtctagacacctgactcatagaataatgagt-aataaaatt---gtgcttgttttagtccattaagtttttgggagggttgat i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78091491 552 + 98207768 I a score=5915752.000000 s hg38.chr21_KI270874v1_alt 15722 431 + 166743 aatacagcaatagg-taactaaA--AGA-----GCTCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGT--TACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTGATTCCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAGTATTTCTTGTCTAAACATGAATATATGGATATAAATATTGTTCACT----TAGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTAATAAATATGATATAAATAATATATTTAAGTATATTATAATTTAAAGTGTTTTCACTTTTGT----ATAATCTTTGT--TCCATT-AAAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT s panTro5.chr21 3632106 431 + 33445071 aatacagcaatagg-taactaaA--AGA-----GCTCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGT--TACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTGATACCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAGTATTTCTTGTCTAAACATGAATATATGGATATAAATATTGTTCACT----TAGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTAATAAATATGATACAAATAATAGATTTAAGTATATTATAATTTTAAGTGTTTTCACTTTTGT----ATAATCTTTGT--TCCATT-AAAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267394 431 + 46275980 aatacagcaatagg-taactaaA--AGA-----GCTCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGT--TACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTGATACCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAGTATTTCTTGTCTAAACATGAATATATGGATATAAATATTGTTCACT----TAGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTAATAAATATGATACAAATAATAGATTTAAGTATATTATAATTTTAAGTGTTTTCACTTTTGT----ATAATCTTTGT--TCCATT-AAAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206063 430 - 13858734 aatacagcaatagg-taactaaA--AGA-----GCTCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGT--TACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTAATACCTAAA-A-AAATAAGCACTGAAAATTTCAGACTAAAAGATAGCCGACCTCCAAGTATTTCTTGTCTAAACATGAATATATGGATATAAATATTGTTCACT----TAGACTTTTTTAGAAAAATCATCAAAACATCAAAGCATTTTAAACATTAATAAATATGATACAAATAATAGATTTAAGTATATTATAATTTTAAGTGTTTTCACTTTTGT----ATAATCTTTGT--TGCATT--AAAAAAAC-CTTCAATTTCTATAAACATTA---------------AAACTCATATAAA-AATAGTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4394092 430 + 32716333 aatacagcaatagg-taactaaA--AGA-----GCCCAAAACTACTCCTAAAAGAACAGAGAAAATTGATACTGAGGACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGT--TACAGAATTGCCACATCTGAAATAATGAACATTTTGAATTGATACCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCGACCTCCAAGTATTTCTTGTCTAAACATGAATACATGGATATAAATATTGTTCACT----TAGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTAATAAATATGATACAAATAATAGATTTAAGTATATTATAATTTTAAGTGTTTTCACTTTTGT----ATAATCTTTGT--TCCATT--AAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349421 434 - 185818997 aatacagcaataga-taactaaA--GGA-----GTTCAAAGCTACTCCTAAAAGAAGGGAGAAAATTGATACCGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----CGT--TACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATATCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACT----TCGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTTGT--TCCATT-AAAAAAAAA-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162172124 434 - 192294377 aatacagcaataga-taactaaA--GGA-----GTTCAAAGCTACTCCTAAAAGAAGGGAGAAAATTGATACCGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----CGT--TACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACT----TCGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTTGT--TCCATT-AAAAAAAAA-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8650136 434 + 9440265 aatacagcaataga-taactaaA--GGA-----GTTCAAAGCTACTCCTAAAAGAAGGGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----CGT--TACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACT----TCGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTTGT--TCCATT-AAAAAAAAA-CTTCAATTTCTATAAACGTTT---------------AAACTCATATAAA-AATAGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8381194 434 + 21915920 aatacagcaatgga-taactaaA--GGA-----GCTCAAAGCTACTCCTAAAAGAAGAGAGAAAATTGATACCGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----CAT--TACAGAAATGCTACATCCGAAATAATGAACACTTTGAATTGATACCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAATCTCCAAATATTTCTTATCTAAACATG-ATATGTGGATACAAATATTGTTCACT----TCGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTTGT--TCCATT-AAAAGATAA-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14957578 437 - 90373283 aatacagcaatgga-taaATAAA--GGA-----GCTCAAAGCTACTCCTAAAAGAAGAGAGAAAATTGATACAGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAACAGAAAAGT--TACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACT----TCGACTTTTTTAGAAAA---ATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTCGT--TCCATT-AAAAAAAAACCTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2124943 438 + 4234846 aatacagcaataga-taactaaA--GGA-----GTTCAAAGCTACTCCTAAAAGAAGAGAGAAAATTGATACTGAGGACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----CGT--TACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTAAA-A-AAATAAGCACAGAAAATTTCAGACTAAAAGATAGCCAACCTCCAAATATTTCTTGTCTAAACATG-ATATGTGGATACAAATATTGTTCACTTCGATCGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTTGT--TCCATT-AAAAAATAA-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATTGTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129040 435 - 13750039 aatacagcaataga-taactaaA--GGA-----GCTCAAAGCTACTCCTAAAAGAAGAGAGAAAATTGATACTGAGAACTCTGACATAAACCAGCTGGAATCATTTTAAAAATAAC-----TGT--TACAGAAATGCTACATCTGAAATAATGAACACTTTGAATTGATACCTAAA-A-AATTAAGCACAGAAAATTTCAGACTAAAAGATAGCCAATCTCCAAATATTTCTTGTCTAAACATGAATATGTGGATACAAATATTGTTCACT----TCGACTTTTTTAGAAAAATCATCAAAATGTCAAAGCATTTTAAACATTTATAAATATGATACAAATAATAGATTTAAGTATATTATAACTTTAAGTGTTTTCACTTTTATATAAATAATCTTTGT--TCCATT-AAAAAAAAA-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884488 433 + 50472720 agtactgcaatact-taactaaa--aGA-----GCTTGAAACTACTTCTAAAAGAACAGAGAAAATTGATACTAAGAACTTTGACACAAACCAACTGGAATCATTTTATGAATAAC-----TGT--TACAAAATTGCTACATCTGAAATAATGAACATTTTGAAT---TGCTTTAA-A-AAATAAGCACATAATATTTCAGACTAAAAGACAGCAGACCTCCAAGTGGTTCTTGTCTAAACACAAATATATGGATATAAATATTGATCAGT----TAGACTTTTTTAGAAAGATCATCAAGATGTCAAGGCATTTTAAACATTAATAAGTGTGATACAAATAAAAAATTTAAGTATATTACAATTTTCAGTGTTTTTACTTTTATATAAATAATCTTTGT--TCCATTTAAAAAAAAC-CTTCAATTTCTATAAACATTT---------------AAACTCACATAAA-AATAGTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4995315 431 + 13128814 aatactgcaatagg-taactaaa--aGA-----GCTTGAAACTACTTCTACAAGAACAGAGAAAATTGATACTAAGAACTTTGACATAAACCAACTGGAATCATTTTACAAATAAC-----TGT--TACTAAATTGCTACATCTGAAATAATGAACATTTTGAATTGATGCTTTAA-A-ACATAAGCAC---ATATTTCAGACTAAAAGATAGCAGACCTCCAAGTCGTTCTCATCTAAACACAAATATATAGATATAAATATTGTTCAGT----TAGACTTTTTTAGAAAGATCATCAAGATGTCAAGGCATTTTAAACATTAATAAGTGTGATACaaataaaaaatttaagtatattacaattttaagtgtttttacttttatataaataatCTTTGT--TCCATT--AAAAAAAA-CTTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9569874 436 - 14377064 aatactgcaataggttaactaaa--aGA-----GCTTGAAACTACTTCTAAAAGAACAGAGAAAATTGATACTAAGAACTTTGACATAAACCAACTGGAATCATTTTACAAATAAC-----TGT--TACAAAATTGCTACATCTGAAATAATGAACATTTTGAATTGATGCTTTAA-A-AAATAAGCACATAATATTTCAGACTAAAAGATAGCAGACCTCCAAGTAGTTATTGTCTAAACACAACCATTTGGATATAAATATTGTTCCGT----TAGGCTTTTTCAGAAAGATCATCAAGATGTCAAGGCATTTTAAACATTAATAAGTGTGATACAAATAAAAAATTTAAGTATATTACAATTTTAAGTGTTTTTACTTTTATATAAATAATCTTTGT--TCCATT-AAAAAAAAA-CTTCCATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8693199 435 + 9889416 aatactgcaatagg-taactaaa--aGA-----GCTTGAAACTACTTCTAAAAGAACAGAGAAAATTGATACTAAGAACTTTGACATAAACCAACTGGAATCATTTTACAAATAAC-----TGTTATACAAAATTGCTACATCTGACATAATGAACATTTTGAATTGATGCTTTAA-A-AAATAAGGACATAATATTTCAGACTAAAAGATAGCAGACCTCCAAGTAGTTCTTGTCTAAACACAAATATATGGATATAAATATTGTTCAGT----TAGACTTTTTTAGAAACATCATCAAGATGTCAAGGCATTTTAAACATTAATAAGTGTGATACAAATAAAAAATTTAAGTATATTATAATTTTAAGTGTTTTTACTTTTATATAAATAATCTTTGT--TCCATT---AAAAAAA-ATTCAATTTCTATAAACATTT---------------AAACTCATATAAA-AATAGTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19156806 432 + 47401472 aacagaacaatagg-taactaaaaGAGA-----GCTCAAAACTGCTCCTAAAAGAACAGAGAAAATTGATGCTGAGAACTCTGAACTAGGTGAATTAGAATCATTTTAAAAATAAC-----TGT--TACTAAATTGCTACATCTGAAATAATGAACATTTTGTATTAACACATAAA-G-AAATAAGTGCAGAAAATTTCAGACAAAATGAAAGCAGACCTCCCAGTATTTCCTGTCTGAACTTGAATATGTGGATATAAAAATTGTTCAGT----TTAACTTTGCTAGAAAAATCAGCAATATGTCAAAGTATTTTAAACATTAATAAGTGTGATACAAATGATAGACTTGAGTATATTACAATTTTAAATGTTTCTACTTTTATATAAATAATCTTTAT--GCCATT----AAAAAT-CTCCAATTTCTATAAACACTT---------------AAACTCATATAAA-ACT--CA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20721467 416 - 38779656 aacatagcaatggg-gaactaaAAGAGA-----GCTCGAAACT---------------GAGAAAATCACTGCTGAGAACTCTGAAATAGATCAATTAGGATCATTTTACAAATAAC-----TAT--TACCAAATTGCTACATCTGAAATAATGAACATTTTGTATTAACACATAAA-GAAAATAAGCACAGAAAATTTCAGACAAAATGAAAGCGGACTTCCCAGTATCTCTTGTCTGAA-TTGAATATAAGATTATAAATATTATTCCGT----TTAACTATGCCAGAAAAGTCAGCAAGATGACAAAGTATTTTAAACATAAATAAGTGTGATATAAATGATAGACTCGAGTATATTATAGTTCCAAATATTTCAATTTTTAT----ATAATCTATTT--GCCATT---AAAAAAT-CTTCAATTTCTGTAAACACTT---------------AAATTCATGTAAA-AATAGTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78092043 422 + 98207768 AATAGAGCAAAAAG-TAACTAAA--AGAAAGGGGAAAAAATCTGCTTCTAAAAGTACTAAAAAAAATTATGTTGAATACTATGAAAT-----GGCTATAATCGTGGTATGGATCAC-----TAT--TCAAAAACTACTCCATC-------ATGAACATACGGCCCTAACGTCTAAAGA-AAATAAGCAC-CAAAGTTTCAAAGGAAAGGAGAGCAGACCTCCCAGCACGTCTTGTCTAAACCAGAGTACATGGGTATAAATATTGTTCCGT----TTAATGTTGTTAGAAAAATCATCAAGATGTCAGAGCA-GTTAAACATTAATAAGTGTGATAAAAATGATAGGCTTGAGTGAGT-----ATCTATGTCTGTGCATGCTTGTATAAACAACCTCTGT--AGCGTT-TTTACAAAT-CTCCCATTTCTATCAACATTC----------------AGCTCACATAAAGAATAGTT i mm10.chr16 I 552 I 286 s canFam3.chr31 13782291 451 + 39895921 agcatagcaatata-taactaaa--aGAAT---GCTCAAAACAGATCTTGAAAGAACAGAGAAACCTGATGCTATGTACTCTGAAATAGACCAAATGGAATCATTTTACCAAAAGC-----TTT--TACAAAA-TGCTTCATCTATAGTAAAGTACATTTTATATTAACATATAAA---AAATAAGCACAGAAGTTTTCAGACAAAAAGAAAGCAGACCTCCCACTATTTCTTGTCTAAACTTGAATGTATGGATATAAATATTATTCAGT----TTAACTTTGTTAGAAAAATCAGCAAGATGTCAGAGCAATTTAAACATGAATAAGTGTGATACAAACGATATGCTTGAGTATATTACAATTTTAAATGTCTCTACTTTTATCTAAAGAATCTAAATAAACCATT--AAAAAAAT-CTCCAATTTCTATAAACATTTAAGAATTAAACACTTAAACTCATGTAAA-AATAGTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3553768 434 - 6883506 gacacagcaataga-taTCAAAAGGAGA-----ACTCCAAACTACTCTTGAAATAACAAAGAAAATTGATGTCAACAAATCTGAAATTGACCAAGTGGAATTACTTTAAAGATAAG-----GTT--TACAAAATTTCTACTTCTGAGATAATGTACATTTAGCATTACCATATAAAGG-AAAAAAGTACAGAAATTTTCTGATAAAAGAAAAGCAGACTTTCCAGTATTTCTTGTCTAAACTTGAATACAGAGATATACAAACTTTTCAGT----TTAATATTGTTAGAAAAATCAGC-AGATGATAGAGCACTTTAAACATCCTTAATTGTTTTATAAATGATATATTTCTGTATATTATAATTCATATGGTCTCAACTTTTAC----ATAATCTTTCT--ACCATTTAAAAATAAC-ACCCTGTCTCTATAAACACTT---------------AACTTCATGTAAA-GCTCATA i dasNov3.JH568778 C 0 C 0 a score=223625.000000 s hg38.chr21_KI270874v1_alt 16153 17 + 166743 ATTAGTAAGTAAGTCAA s panTro5.chr21 3632537 17 + 33445071 ATTAGTAAGTAAGTCAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267825 17 + 46275980 ATTAGTAAGTAAGTCAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206493 17 - 13858734 ATTAGTAAGTAAGTCAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4394522 17 + 32716333 ATTAGTAAGTAAGTAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349855 17 - 185818997 ATTAGTAAGTAAGTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162172558 17 - 192294377 ATTAGTAAGTAAGTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8650570 17 + 9440265 ATTAGTAAGTAAGTAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8381628 17 + 21915920 ATTAGTAAGTAAGTAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958015 17 - 90373283 ATTAGTAAGTAAGTAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125381 17 + 4234846 ATTAGTAAGTAAGTAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129475 17 - 13750039 ATTAGTAAGTAAGTAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884921 17 + 50472720 ATTGGTGAGTAATTAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4995746 17 + 13128814 ATTGGTGAGTAAGTAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570310 17 - 14377064 ATTGGGGAGTAAGTAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8693634 17 + 9889416 ATTGGTGAGTAAGTAAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19157238 17 + 47401472 ATCATTAAGTAAGTTAA i micMur3.chr31 C 0 I 47 s otoGar3.GL873528 20721883 14 - 38779656 ATCAGTAAGTAAAT--- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13782742 17 + 39895921 ATCAGTAAGTAAGTAAA i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3554202 17 - 6883506 ATCAGAAAATAAATAAA i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78092465 286 + 98207768 I a score=204854.000000 s hg38.chr21_KI270874v1_alt 16170 24 + 166743 CTAGGAGA-TGGATTCCCAGCAAAA s panTro5.chr21 3632554 24 + 33445071 CTAGGAGA-TGGATTCCCAGCAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267842 24 + 46275980 CTAGGAGA-TGGATTCCCAGCAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206510 24 - 13858734 CTAGGAGA-TGGATTCCCAGCAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4394539 24 + 32716333 CTAGGAGA-TGGATTCCCAGCAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349872 24 - 185818997 CCAGGAGA-TGAATTCCCAGCATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162172575 24 - 192294377 CCAGGAGA-TGAATTCCCAGCATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8650587 24 + 9440265 CCAGGAGA-TGAATTCCCAGCATAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8381645 24 + 21915920 CCAGGAGA-TGAATTCCCAGCAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958032 24 - 90373283 CCAGGAGA-TGAATTCCCAGCAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125398 24 + 4234846 CCAGAAGA-TGAATTCCCAGCAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129492 24 - 13750039 CTAGGAGA-TGAATTCCCAGCAAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884938 25 + 50472720 CTAGGAGACTTCATTCCCAGAAAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4995763 25 + 13128814 CTAGGAGACTTCATTCCCAAAAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570327 25 - 14377064 CTAGGAGACTTCATTCCCAGAAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8693651 25 + 9889416 CTAGGAAACTTCATTCCCAGAAAAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20721897 25 - 38779656 TTGGAAGACTCCGTTTTTAACAAAA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13782760 24 + 39895921 TAAAAAGATTTAATTCTTAGTAAA- i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3554219 21 - 6883506 TTAGTA---TCAATTCCAAGGAAA- i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157255 47 + 47401472 I e mm10.chr16 78092465 286 + 98207768 I a score=275208.000000 s hg38.chr21_KI270874v1_alt 16194 23 + 166743 TTCAACTAGCTATTTCTGGGACA- s panTro5.chr21 3632578 23 + 33445071 TTCAACTAGCTATTTCTGGGACA- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267866 23 + 46275980 TTCAACTAGCTATTTCTGGGACA- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206534 23 - 13858734 TTCAACTAGCTATTTTTGGGACA- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4394563 23 + 32716333 TTCAACTAGCTATTTTTGGGACA- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349896 23 - 185818997 TTCAACTAGCTATTTTTGGGAAA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162172599 23 - 192294377 TTCAACTAGCTATTTTTGGGAAA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8650611 23 + 9440265 TTCAACTAGCTATTTTTGGGAAA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8381669 23 + 21915920 TTCAACTAGCTATTTTTGGGAAA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958056 23 - 90373283 TTCAACTAGCTATTTTTGGGAAA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125422 23 + 4234846 TTCAACTAGCTATTTTTGGGAAA- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129516 23 - 13750039 TTCAACTAGCTATTTTTGGGAAA- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884963 23 + 50472720 TTTAACTGGCTATTTTTGGGAAA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4995788 23 + 13128814 TTTAACTGGCTATTTTTGGGAAA- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570352 23 - 14377064 CTTAACTGGCTATTTTTGGGAAA- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8693676 23 + 9889416 TTTAACTGGCTATTTTTGGGAAA- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20721922 23 - 38779656 TTCAAACTGGTATTTTTGAAACA- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78092751 22 + 98207768 cTCAACTGGCTGTTTTTAAAAG-- i mm10.chr16 I 286 C 0 s canFam3.chr31 13782784 23 + 39895921 CTCAACTGGCAATTTTTTAAAAG- i canFam3.chr31 C 0 I 44 s dasNov3.JH568778 3554240 24 - 6883506 TTCAAATGCCAGTTTTTAAAACCG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157255 47 + 47401472 I a score=4846819.000000 s hg38.chr21_KI270874v1_alt 16217 318 + 166743 GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCTGAAAGGTACAATTTC-AAATCAAGCAGAAGAGGTAA-C--AGTTTTTAGGAATTCT-----------TTTTTTTCCAATTTAGTGAGA--TAAAAATGCGCTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATACACTCTAAGACTGAATTCAATTCCACCTGAATA------TATTACAGGGAGAATATGTCACATCCAATATTGAGGGAAACACGAAGCTTCTTAGGAAATGTAAATATTTCTACTTTAGCAAGTCTAATCTCATTCATCATCATCAGT s panTro5.chr21 3632601 318 + 33445071 GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCTGACAGGTACAATTTC-AAATCAAGCAGAAGAGGTAA-C--AGTTTTTAGGAATTCT-----------TTTTTTTCCATTTTAGTGAGA--TAAAAATGCATTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATACACTCTAAGATTGAATTCAATTCCACCTGAATA------TATTACAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTAATTCATCATCATCAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17267889 318 + 46275980 GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCTGACAGGTACAATTTC-AAATCAAGCAGAAGAGGTAA-C--AGTTTTTAGGAATTCT-----------TTTTTTTCCATTTTAGTGAGA--TAAAAATGCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATACACTCTAAGATTGAATTCAATTCCACCTGAATA------TATTACAGGGAGAATATGTCACATCCAATATTGAGGGAAACACGAAGCTTCTTAGGAAATGTAAACATTTCTACTTTAGCAAATCTAATCTAATTCATCATCATCAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206557 317 - 13858734 GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCTGAAAGGTACAATTTC-AAATCAAGCAGAAGAGGTAA-C--AGTTTTTAGGAATTAT-----------TTTTTTTCCATTTTAGTGAGA--TAAAAATGCATTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAA-GAATGTAAAAATAAATACACTCTAAGAATGAATTCAATTCCACCTGAATA------TATTACAGGGAGAATATGTCACATCCAATATTGAGGGAAACACAAAGCTTCTTAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATATGATTCATCATCATCAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4394586 318 + 32716333 GTCCACTG-ATAATATGAACTTAAGATCAACTGATCTTCTGAAAGGTACAATTTC-AAATCAAGCAGAAGAGGTAA-C--AGTTTTTAGGAATTCT-----------TTTTTTTCCATTTTAGTGAGA--GAAAAATGCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATACACTTTAAGATTGAATTCAATTCCACCTGAATA------TATTACAGGGAGAATATGTCACATCCAATATTGAGGGAAACACGAAGCTTCTTAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155349919 317 - 185818997 GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-C--ATTTTTTAGGAATTC------------TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATA------TATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162172622 317 - 192294377 GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-C--ATTTTTTAGGAATTC------------TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATA------TATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8650634 317 + 9440265 GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-C--ATTTTTTAGGAATTC------------TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATA------TATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8381692 317 + 21915920 GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-C--ATTTTTTAGGAGTTC------------TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATA------TATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958079 317 - 90373283 GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-C--ATTTTTTAGGAATTC------------TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATA------TATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125445 317 + 4234846 GTCCACTG-ATAATATGAACTTAAGATTAACTGATCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-C--ATTTTATAGGAATTC------------TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATATACTTTAAGACTGAATTCAATTCCACCTGAATA------TATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAACCTGATTCATCATCATCAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129539 317 - 13750039 GTCCACTG-ATAATATAAACTTAAGATTAACTGGTCTTCTGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-C--ATTTTTTAGGAATTC------------TTTTTTTCCATTTTAGTGAGA--TAAAAACTCACTCATTTAGATGCCAAAAT-CATTTAAAGCTTGTGTAATGAATGTAAAAATAAATATACTTTAAGATTGAATTCAATTCCACCTGAATA------TATTATAGGGAGAATATGTCACATCCAATATTGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACGTTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21884986 318 + 50472720 GTCCACTG-ATAGTATGAACTTAAGATTAACTGATCTTCTACAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAAGT--TTTTTTTAGGAATTCC-----------TTCTTTTTCATTTTAGTGAGA--TAAAAATGCACTCATTTAGATGTCAAAAT-TGTTTAAAACTTGTGTAATGAATGTAAAAATAAATACACTTCAAGGTTGAATTCAATTCAACCTCAATA------TATTACAAGGAGAATATGTCACATCCAGT-TAGAGGGAAACATGAAACTTCTAAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCCGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4995811 327 + 13128814 GTCCACTG-ATAGTATGAACTTAAGATTAACTGATCTTCTACAAGGTGCAATTTC-AAGTCAAGCAGAAGAGGTGA----TTTTTTTAGGAATTCCTTTTTTTTTTTTTTTTTTTCATTTTAGTGAGA--TAAAAATGCACTCATTTAGATGCAAAAAT-TGTTTAAAACTTGTGTAATTAATGTAAAAATAAATACGCTTCAAGGTTGAATTCAATTCAACCTGAATA------TATTACAAGGAGAATATGTCACATCCAGT-TAGAAGGAAACATGAAGCTTCTTAGGAAATGTAAACATTTCTACTTTGGCAAGTCTAATCTGATTCATTATCATCAGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570375 314 - 14377064 GTCCACTG-ATAGTATGAACTTAAGATTAACTGA---TCTACAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-T--TTTTTTTAGGAATTTC-----------TTTTTTTTCATTTTAGTGAGA--TAAAAATGCATTCATTTAGATGCCAAAGT-TGTTCAAAACTTGTGTAATGAATGTAAAAATAAATACATTTCAAGGTTGAATTCAATTCAACCTGAATA------TATTACAAGGAGAATATGTCACATTCAGT-TAGAGGGAAACATGAAGCTTCCTAGGAAATGTAAACATTTCTACTTTAGCAAGTCTCAACTGATTTATCATCGTCAGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8693699 316 + 9889416 GGCCACTG-ATAGTATGAACTTAAGATTAACTGATCTTCTACAAGTTGCAATTTC-AAATCAAGCAGAAGAGGCAA-T--TTTTTTTAGGAATTCC-----------TTTTTTTTCATTTTAGTGAGA--TAAAAATGCACTCATTTAGATGCCAAAAT-TGTTTAAAACTTGTGTAATGAATGTAAAAATAAATACACTTCAAGGTTGAATTCAATTCAACCTGAATA------TATTACAAGGAGAATATGTCACATCCAGT-TAGAGGGAAACATGAAGCTTCTTAGGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCT-ATTCATCATCATCAGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19157302 315 + 47401472 GTCCACTG-ATAATATGAACTTAAGATAAACTGATCTTCAGAAAGGTGCAATTTC-AAATCAAGCAGAAGAGGTAA-C--ATTTTTTGAGAA---------------TTTTTTTCCATCTTAGTAGGA--TAAAAATGTCCTCATTTGGATGCCAATCTTCCTTTAAAGCCTGTGTAATGAATGTAAAAATAAACACACTTCAAATTTGAATTCAATTCCACCTGAATA------TATTACAGGGTGAGTATGTCACATCCAATATTGAGAGAAACATGAGGCTTCTTAGGAAATGTAAACATTTCTAGTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i micMur3.chr31 I 47 I 11 s otoGar3.GL873528 20721945 322 - 38779656 GTCTGCTG-ATAATATGAACTTAAAATCAACTGATTTTCTGAAAAGTGCAATTTT---ATCAAGTAGAAGAGGTAA-C--ATTTTTTATAAATCC------------TTTTTTTTTATCTTAGGAGTA--TAAAAATGCACTCATGTGGAGGCCAAACTGCCTTTAAAGCCTGTGTAATTAATATAAAAATAAACATACTTCCAATTTGAATTCAATTCCAGCCGAATATGCAGGTATTACAGGGTAAGTGTGTCACATCCAGCGCTGAGGGAAACGTGAGGCTTCTTAGGAAATGTAACCGTTTCTCCTTTACCAGGTCTAATCGGATGCATCATCATGAGC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78092773 303 + 98207768 GTCCACAGAATAATATGAATCTA-----AACTGAT----TGAAGGTCACAATATC-AAATCAATTAGAATGAATCC-C--CTTTTT---------------------TTATTTTCCATTTTACTGAAATTTTAGAAAGCTCTCATTTTTATGTCAGATTTCCTTGAAAGCTGATGTAATGAGTGTAAAAATAAACACATTTGAAGTTCAAATTCAATTTCACCTGAATA------TATTATGGAGCAAGCCTGTCACATCCAATGCTGAGGGAAACAGGAGGCTTCTTCAGAAATGTAAACGTTTCTACTTTAGCAAGTCTAACCTGATTATCCATCATCCAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13782851 312 + 39895921 ATCTACTG-ATAATATGAACTTA-----AACTGAACTTCTGAAAGGTGTGATTTCAAAATCAAGCAGAGGAAGTAA-C--ATGTTTTAGAAATAC------------TTTTTCCCCATC-TAGCGAGA--TGAAAATGCACTCTTGTAGATGCCAAACT-TCTTTAGAGCTTGTGTAATGAATATAAAAGTAAACACATTTCAAGTTTGAATTCAATTCCACCTGAATA------TATTACAGGGCAAGTATGTCACATCCAATATTGAAGGAAACATACGGCTTCTTAAGAAATGTAAACATTTCTACTTTAGCAAGTCTAATCTGATTCATCATCATCAGT i canFam3.chr31 I 44 C 0 s dasNov3.JH568778 3554264 319 - 6883506 GTTCACTG-ATAATATGAACTTAATGTAATTTGATCTTCTTAAAGATATGATTTC-AAATCAAGCCGAAGACATAA-CCTACTTTTTAAGAATAC------------TTTTCTTCCATCTTACAGAGA--TGAAAAT-CACTCATTTGGATTTCAAATTTCCTTTAAAGCTTGTGTAATGAGTGTAAAAATAAACACATTTCAAGTTTGAATTCAATTGCACCTGAATA------TATTACAAGGCAAGTATGTCACATTCAATATTGAGGGAAGCATGAGGCTCTTCAGGAAATGTAAACATTTTTACTTTAGCAAGTCTAATCTGATTCATCATCAGCGAT i dasNov3.JH568778 C 0 C 0 a score=140800.000000 s hg38.chr21_KI270874v1_alt 16535 36 + 166743 GTGTCCCCT-CCACCCCAACCAaaa---aag---aag---aagaag s panTro5.chr21 3632919 39 + 33445071 GTGTCCCCT-CCACCCCAACCAaaaaagaag---aag---aagaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17268207 36 + 46275980 GTGTCCCCT-CCACCCCAACCAaaa---aag---aag---aagaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206874 36 - 13858734 GTGTCCCCT-CCACCCCAACCAAAA---AAA---AAG---AAGAAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4394904 36 + 32716333 GTGTCCCCT-CCACCCCGACCAAAA---AAA---AGG---AAGAAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350236 42 - 185818997 GTGTCCCCT-CCACCGCGACCaaaaaaaaaaaaaaag---aagaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162172939 42 - 192294377 GTGTCCCCT-CCACCGCGACCaaaaaaaaaaaaaaag---aagaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8650951 42 + 9440265 GTGTCCCCT-CCACCGCGACCAAAAAAAAAAAAGAAG---AAGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382009 39 + 21915920 GTGTCCCCT-CCACTGTGAACAAAAAAAAAA---AAG---AAGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958396 39 - 90373283 GTGTCCCCT-CCACTGTGACCAAAAAAAAAA---AAG---AAGAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125762 34 + 4234846 GTGTCCCCT-ACACCGCGACCAAAAAAAAAA---A--------AAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129856 37 - 13750039 GTGTCCCCT-CCACCGCGACCAAAAAAAAAA-----G---AAGAAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885304 41 + 50472720 CAGTGTCCTCCCACCTCAACCAAAAAAAAAA---AAA--AAAGAAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996138 43 + 13128814 GAGTGTCCTCCCACTCCGACCaaaaaaaaaa---aaaagaaaaaga i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570689 35 - 14377064 GAGTGTCCTCCCACCCCGACCAAAAAAAAAA---AAA--------G i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694015 41 + 9889416 GAGTGTCCTCCCACCCCGACCAAAAAAAAAA---AAA--GAAGAAG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20722267 11 - 38779656 ----------------------AAGTACAAA---AA---------- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78093076 23 + 98207768 -----------------GAGTaaaaaaaaaa---aaa---aaaaaa i mm10.chr16 C 0 I 5 s canFam3.chr31 13783163 9 + 39895921 ----------------------AAGTACAAA--------------- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3554583 15 - 6883506 ----------------TGGAAAAAAAAAAAA--------------- i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157617 11 + 47401472 I a score=540569.000000 s hg38.chr21_KI270874v1_alt 16571 33 + 166743 aagaaATAGTTTGGAAAGAGTCCAAAGATCATT s panTro5.chr21 3632958 33 + 33445071 aagaaATAGTTTGGAAAGAGTCCAAAGATCATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17268243 33 + 46275980 aagaaATAGTTTGGAAAGAGTCCAAAGATCATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206910 33 - 13858734 AAGAAATAGTTTGGAAAGAGTCCAAAGATCATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4394940 33 + 32716333 AAGAAATAGTTTGGAAAGAGTCCAAAGATCATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350278 33 - 185818997 aagaaaTAGTTTGGAAAGAGTCCAAAGATCATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162172981 33 - 192294377 aagaaaTAGTTTGGAAAGAGTCCAAAGATCATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8650993 33 + 9440265 AAGAAATAGTTTGGAAAGAGTCCAAAGATCATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382048 33 + 21915920 AAGAAATAGTTTGGAACGAGTCCAAAGATCATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958435 33 - 90373283 AAGAAATAGTTTGGAAAGAGTCCAAAGATCATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125796 33 + 4234846 AAGAAATAGTTTGGAAAGAGTCCAAAGATCATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129893 33 - 13750039 AAGAAATAGTTTGGAAAGAGTCCAAAGATCATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885345 33 + 50472720 AAGAAATAGTTTGGAAAGTGTCCAAAGATCATT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996181 33 + 13128814 aaaaaaTAGTTTGGAAAGTGTCCAAAGATCATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570724 33 - 14377064 AAGAAACAGTTTGGAAAGTGTCCAAAGATCATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694056 33 + 9889416 AAGAAATAGCTTGGAAAGTGTCCAAATATCATT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19157628 33 + 47401472 AAGGAATAGTTTGGAAAGTGTCCAAAGATCATT i micMur3.chr31 I 11 I 27 s otoGar3.GL873528 20722278 33 - 38779656 AAGGAGTGGTTTGGAAAAACTCCACAGATCATT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78093104 33 + 98207768 aaagaaTATTTTAGAAAGCATCCAAGTATCATC i mm10.chr16 I 5 C 0 s canFam3.chr31 13783172 33 + 39895921 AAAAAATAGTTTGGAAAGATTCCAAAAATCATT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3554598 29 - 6883506 AAGGAATAGTTTGGAAAGAGTCCAAAGAC---- i dasNov3.JH568778 C 0 C 0 a score=226171.000000 s hg38.chr21_KI270874v1_alt 16604 27 + 166743 CAAAGTGAACC------A--AAAAAAATCCTATTA s panTro5.chr21 3632991 27 + 33445071 AAAAGTGAACC------A--AAAAAAATCCTATTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17268276 27 + 46275980 AAAAGTGAACC------A--AAAAAAATCCTATTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206943 28 - 13858734 AAAAGTGAACC-----AA--AAAAAAATCCTATTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4394973 28 + 32716333 AAAAGTGAACC-----AA--AAAAAAATCCTATTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350311 28 - 185818997 AAAAGTGAACC-----AA--AAAAAAAGCCTGTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173014 28 - 192294377 AAAAGTGAACC-----AA--AAAAAAAGCCTGTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651026 29 + 9440265 AAAAGTGAACC----AAA--AAAAAAAGCCTGTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382081 28 + 21915920 AAAAGTGAACC-----AA--AAAAAAAGCCTGTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958468 28 - 90373283 AAAAGTGAACC-----AA--AAAAAAAGCCTGTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125829 28 + 4234846 AAAAGTGAACC-----AA--AAAAAAAGCCTGTTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129926 32 - 13750039 AAAAGTGAACCAA-GAAA--AAAAAAAGCCTGTTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885378 27 + 50472720 AAAAGTGAACC------C--AAAAAAATCCTATTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996214 29 + 13128814 AAAAGCGAACC------CCAAAAAAAATCCTATTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570757 27 - 14377064 AAAAGCAAACC------C--AAAAAAATCCTATTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694089 27 + 9889416 AAAAGCAAACC------C--AAAAAAATCCTATTA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20722311 27 - 38779656 AAAAGT-AACA-----GA--AATAAAACACTGTTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78093137 25 + 98207768 -AAAACTAACA-----AT--AGAGATGCTCTGG-- i mm10.chr16 C 0 C 0 s canFam3.chr31 13783205 27 + 39895921 AAAAGTGACAG------G--GAAAAAATGCTATTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3554627 22 - 6883506 -----------AAGGGAC--AGAAAAATGCTATTA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157661 27 + 47401472 I a score=11896.000000 s hg38.chr21_KI270874v1_alt 16631 10 + 166743 ATTTTGCATT s panTro5.chr21 3633018 10 + 33445071 ATTTTGCATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17268303 10 + 46275980 ATTTTGCATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206971 10 - 13858734 ATTTTGCATT i gorGor5.CYUI01015003v1 C 0 C 0 s mm10.chr16 78093162 10 + 98207768 ATTTCACATT i mm10.chr16 C 0 I 9 s dasNov3.JH568778 3554649 10 - 6883506 ATTTCACATT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C a score=1332.000000 s hg38.chr21_KI270874v1_alt 16641 2 + 166743 TT s panTro5.chr21 3633028 2 + 33445071 TT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17268313 2 + 46275980 TT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206981 2 - 13858734 TT i gorGor5.CYUI01015003v1 C 0 C 0 s dasNov3.JH568778 3554659 2 - 6883506 TC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C a score=359027.000000 s hg38.chr21_KI270874v1_alt 16643 657 + 166743 GCAAAAAGgagggaagagccaagatggccgaataggaacagctccggtctacagttctcagtgtgagcgacgcagaagacgggtgatttctgcatttccatccgagctttgaagagagcagtggttctcccagcacgcagctggagatctgagaacgggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtaggggcagactgacacctcacacggccgggtactccaacagacctgcagctgaaggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccaccaagatggggaaaaaacaaagcagaaaaactggaaactttaaaaagcagagcgcctctcctcctccaaaggaacacagctcctcaccagcaacggaacaaagctggatggagaatgactttgacgagctgagagaagaagacttcagacgatcaaattactccgagctatgggaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaataaccaatacagagaagtgcttaaaggag s panTro5.chr21 3633030 657 + 33445071 GGAAAAAGgagggaagagccaagatggccgaataggaacagctccggtctacagttcccagtgtgagcgacgcagaagacgggtgatttctgcatttccatctgagctttgaagagagcagtggttctcccagcacgcagctggagatctgagaacgggcagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtaggggcagactgacacctcacacggccaggtactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaaccaagcagaaaaactggaaactttaaaaagcagagcgcctctcctcctccaaaggaacacagttcctcaccagcaacggaacaaagctggacggagaatgactttgacgagctgagagaagaaggcttcagacgatcaaattactccgagctacgggaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaataaccaatacagagaagtgcttaaaggag i panTro5.chr21 C 0 I 9661 s panPan2.chr21 17268315 657 + 46275980 GGAAAAAGgagggaagagccaagatggccgaataggaacagctccggtctacagttcccagtgtgagcgacgcagaagacgggtgatttctgcatttccatctgagctttgaagagagcagtggttctcccagcacgcagctggagatctgagaacgggaagactgcctcctcaagtgggtccctgacccctgacccccgagcagcctaactgggaggcaccccccagtaggggcagactgacacctcacacggccaggtactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacagaacagaaaaactggaaactttaaaaagcagagcgcctctcctcctccaaaggaacacagttcctcaccagcaacggaacaaagctggacggagaatgactttgacgagctgagagaagaaggcttcagacgatcaaattactccgagctacgggaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaataaccaatacagagaagtgcttaaaggag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3206983 657 - 13858734 GGAAAAAGgagggaagagccaagatggccgaataggaacagctccggtctacagttcccagtgtgagcaacgcagaaaacgggtgatttctgcatttccatctgagctttgaagagagcagtggttctcccagcacacagctggagatctgagaacgggcagactccctcctcaagtgggtcactgacccctgacccctaagcagcctaactgggaggcaccccccagcaggggcacactgacacctcacacggccgggtactccaacagacctgcagctgagggttctctctgttagaaggaaaactaacaaacagaaagaacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaaaccacaaagatggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcacctctcctcctccaaaggaacgcagttcctcaccagcaacggaacaaagctggacggagaatgactttgacgagcagagagaagaaggcttcagacgatcgaagtactccgagctacgggaggacattcaaaccaaaggcaaagaagttgaaaacgttgaaaaaaacttagaagaatatataactagaataaccaatacagggaagtgcttaaaggag i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C a score=807667.000000 s hg38.chr21_KI270874v1_alt 17300 3064 + 166743 ctgatggagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagctgatgcaaccaactggaagaaagggtatcagtggtggaagatgaaatgaatgaaatgaagcgagaa-ggaagtttagagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctatcaagacaggccaacgttcagattcaggaaatacagagaacgccacaaagatattactcaagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaaggacagccagagagaaaggtcgggttaccctcaaagggaagcccatcagactaacagcggatctctcggcagaaaccctacaagccagaagagagtgggggccaatattcaacattcttaaaggaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagataagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagagctaaacatggaaaggaaccaccggtaccagccactgcaaaatcatgccaaaatgtaaagaccatcaagactaggaagaaactgcatcaactaacgagcaaaatcaccagctaacatcatagtgacaggattaaattcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggagacacatctcacgtgcagagacacacataggct-aaaataaaaggatggaggaagatctatcaagcaaatggaaaacaaaaaaaggcaggggttgcaatcctagtctcggataaaatagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggagactttaacaccccactgtcaacattacacagatcaacgagacagaaagtcaacaagaatacccaggaattgaactcagccctgcaccaagtggacctaatagacatctacagaactctccaccccaaatcaacagaatataca-tttttttcagcaccacaccacacctattccaaaattaaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctcactcaaaactgatcaactacatagaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccagaaactctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattcaaagaactagaaaagcaagagcaaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaaccc-ttcaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaagaaaaaa----agaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatcaagaataaatggataaattccttgacacatacaccctcccaagactaaaccaggaagaagttgaatctctgaatagcccaataataggatctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccataggtacaaggaggaactggaatcattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgagaccagcatcatcctgataccaaagccgggcagagacacaaccaaaaaagacaaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaatgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcactatatgcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattaatgggacgtacttcaaaataataagagctatctatgacaaacccacagccaatatcataccgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaagaaataaagggtattcaataaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaaccccattgtctcaggccaaaatctccttaagctgataagcaacttcagc--agtctcaggatacaaaatcaatgtacgaaaatcacaagcattcttatacacaaacaacagacaaacagagagccaaatcatgagtgaac s panPan2.chr21 17268972 3040 + 46275980 ctgatggagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagctgatgcgaccaactggaagaaagggtatcagcgatggaagatgaaatgaatgaaatgaagcaagaa-ggaagtttagagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaaatgacagggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaacctagcaaggcaggccaacgttcagattcaggaaatacagagaacaccacaaagatattactcaagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggttaccctcaaagggaagcccatcagactaacagtggatctctcggcagaaaccctacaagccagaagagagtgggggccaatattcaacattcttaaaggaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagagctaaacatggaaaggaaccactggtaccagccactgcaaaatcatgccaaaatgtaaagaccatcaagactaggaagaaactgcatcaacgaatgagcaaaataaccagctaacatcatagtgacaggattaaattcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggagacacatctcacgtgcagagacacacataggct-aaaataaaaggaaggaggaagatctaccaagcaaatggaaaacaaaaaaaggcaggggttgcaatcctagtctctgataaaatagactttaaaccaacaaagatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagaactaactatcctaaatatatatgcacccaatgcaggagcacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggagactttaacaccccactgtcaatattagacagatcaatgagacagaaagtcaacaagaatacccaggaattgaactcagccctgcaccaagtggacctaatagacatctacggaactctccaccccaaatcaacagaatatacattttttttcagcaccacaccacacctattccaaaattaaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctcactcaaaactgatcaactacatagaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaagaaagatccaaaattgacaccctaacatcacaattaaaagaactagaaaagcaagagcaaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatag-gacacaaaacacct-tcaaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaagaaaaaa----agaagaatcaaatagatgcaataaaaaatgataaaggggatataaccaccgatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctagaataaatggataaattccttgacacatacaccctcccaagactaaaccaggaagaagttgaatctctgaatagaccaataataggatctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaactctaccagaggtacaaggaggaactgggaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcatttt--------------------------aagctgggcagagacacaaccaaaaaagacaaatatccttgatgaacattgatgcagaaatcctcaataaaatactggcaaaacgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaactcttcatgctaaaaactctcaataaattaggtattaatgggacgtacttcaaaataagaagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggtacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaagaaataaagggtattcaataaggaaaagaggaagtcaaattgtctctgtttgcagacgacatgattgtatatctagaaaaccccattgtctcaggccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacgaaaatcacaagcattcttatacaccaacaacagacaaacagagagccgaatcatgagtgaac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3207640 3072 - 13858734 ctgatggagctgaaaaccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagcgatggaagatgaaatgaatgaaatgaagcaagaagggaagtttagagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacgaggagaatgaaaccaagttggaaaacactctgcaggctattatccaggagaacttccccaatctagcaaggcaggccaacattcagattcaggaaatacagagaacgccacaaagatactcctcaagaagagcaactccaagacacataattgtcagattcaccaaagctgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggttaccttcaaagggaagcccatcagactaacagcagatctctcagcagaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacgcagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcgccaccaggcctgccttaaaagagctccagaaggaagcgctaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaaatgtaaagaccatcaagactaggaagaaactgcatcaactaacacacaaaataaccagctaacatcataatgacaggatcaaattcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaacccatctcatgtgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaagcaaatggaaaacaaaaaaaggcaggggttgcaatcctagtctctgataaaatagactttaaaccaacaaacatcaaaagagacaaagaaggccattacataatggtaaagggatcaattcaacaagaagaactaactatcctaaatatatatgcacccaatacagaagcaccaagattcataaagcaagtcctgagtgatctacaaagagacttagactcccacacattaataatgggagactttaacaccccactgtcaacattagacagatcaatgaaacagaaagtcaacaaggatacccaggaattgaagtcagctctgcaccaagcggacctaatagacatctacagaacttgccaccccaaatcaacagaatataaa-tttttttcagcaccacaccacacctattccaaaattaaccacatacctggaagtaaagctctcctcagcaaatgtaaaagaacagaaattataacaaactatctctcagaccacaatgcaatcaaactagaactcaggattaagaatcacactcaaaagcactcaactacatagaaaatgaacaacctgctcctgaatgactactgggtacgtaacgaaatgaaggcagaaataaagatgttctttgaaaccagcgagaacaaagacacaacataccagaatctctgggatgcattcaaagcagtgtgtggagggaaatttatagtactaaatgcccacaagtgaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaactagaacagcaagagcaaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatccaggagctggttttttgaaaggaccaccaaaattgatagaccgctagcaagactaataaagaagaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccaccgatcccacagaaatacaaactaccatcagagaacactataaacaactctatgcaaataaactggaaaatctagaagaaatggataaattcctcgacacatacatcctcccaagactaaaccaggaagaagttgaatctctgagtagaccaataataggatctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagccaaattctaccagaggtacaaggaggaactgggaccattccttctgaaactattccaatccatagaagaagagggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagctgggcagagacacaaccaaaaaagagaaatatccttgatgaacattgatgcaaaaatcctcagtaaaatactggcaaacaaaatccagcagcacatccaaaagcttatccaccatgatgaagtgggcttcatccctgggatgcaaggctggttcaatacaagcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatgatcatctcaatagatgcagaaaaggcctttgacaaaattcagcaacccttcctgctaaaaactctcaataagttaggtattaatgggacgtacttcaaaataataagagctatctatgacaaacccacagccaatatcacactgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccgtctctcaccactcctattcaacatagtgttggaagttctggccagggcaattaggcaggagaaagaaataaagggtattcaattaggaaaagaggaagacaaattgtccctgtttgcagacgacacgattgtgtatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatac-aaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaac i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C e panTro5.chr21 3633687 9661 + 33445071 I a score=124855.000000 s hg38.chr21_KI270874v1_alt 20364 225 + 166743 tcccattcacaattgcttcaaagagaataaaatacttaggaatccaacttacaagggacatgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagc s panTro5.chr21 29801733 225 - 33445071 tcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacgttccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagc i panTro5.chr21 n 9661 I 3463 s panPan2.chr21 17272012 225 + 46275980 tcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3210712 224 - 13858734 tcccattcac-attgcttcaaagagaataaaatacttaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagc i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C a score=179692.000000 s hg38.chr21_KI270874v1_alt 20589 444 + 166743 taccaatgactttcatcacagaattgg-aaaaaactactttaaagttcatatggaaccaaaaaagagcct-gcat-caccaagtcaatcctaagccaaaagaacaaagctggaggcatca-cactacc-tgacttcaaacta-tactacaaggc-tacagtaaccaaaacagcatggt-actggtaccaaaat----agagatatagatcaatg-gaacagaaca-gagccctc-agaaataacgcagcatatctacaactatctgatctttgacaaacct---gagaaaaacaa-gcaatggggaaagga-ttccctatttaataaatggtgctgggaaaactggctagccatatggagaa-agctgaaa-ctagatcccttccttacaccttatacaaaaatcaattcaaga-tggattaa-agact-taaacgttagacct-aaaaccataaaaacccaagaagaaa s panTro5.chr21 3643348 455 + 33445071 taccaatgactttcatcatcgaattgg-aaaaaactacttgtagattcatatggaacaaaaaagcagccccacatacgtcaagtcaatccta--ccaaaa--acaaagctggagg-atcaacactaccctgacttcaaactaatact-caaggcctacagtaaccaaaacagcatggttacttgtaccaaaaccagcaga-atata-atcaatgcgaacagaacatgagccctccacaaatactgccgcatatctacaac-atctgatctttgacaaacctcgcaagaaaaacaataccatggggaaaggacttccctatttat---atggttctcgggaaactggctagccatatggagaagagctgaaatctaggatccctccttac--cttataacaaaatcaattcaagaatggattaacagactataaacgttagaccttaaaatgataaaaaccctagaagaaa i panTro5.chr21 I 9661 C 0 s panPan2.chr21 17272237 443 + 46275980 taccaatgactttcatcacagaattgg-aaaaaactactttaaagttcatatggaaccaaaaaagagccc-acgt-cgccaagtcaatcctaagccaaaagaacaaagctggaggcatca-cactacc-tgacttcaaacta-tactacaaggc-tacagtaaccaaaacagcatggt-actggtaccaaaac----agagatatagatcaatg-gaacagaaca-gagccctc-agaaatactgccgcatatctacaac-atctgatctttgacaaacct---gagaaaaacaa-gcaataggggaagga-ttccctatttaataaatggtgctgggaaaactggctagccatatgtagaa-agctgaaa-ctggatcccttccttacaccttatacaaaaatcaattcaaga-tggattaa-agact-taaacgttagacct-aaaaccataaaaaccctagaagaaa i panPan2.chr21 C 0 I 27 s gorGor5.CYUI01015003v1 3210936 443 - 13858734 taccaatgactttcaccacagaattggaaaaaaactattttaaagttcacacggaaccaaaaaagagccc-acat-cgccaagtcaatcctaagccaaaagaacaaagctggaggcatca-tgctacc-tgacttcaaacta-tactacaaggc-tacagtaaccaaaacagcatggt-actggtaccaaaac----agagacatagatcaatg-gaacagaaca-gagctctc---aaataacaccacatacctacaactatctgatctttgacaaacct---gagaaaaacaa-gcaatggggaaagga-ttccctatttaataaatggtgctgggaaaactggctagccatatgcagaa-agctgaaa-ctggatctcttccttacaccttatacaaaaatcaattcaaga-tggattaa-agact-taaatgttagacct-aaaaccataaaaaccctagaggaaa i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C a score=1719.000000 s hg38.chr21_KI270874v1_alt 21033 6 + 166743 acctag s panTro5.chr21 3643803 6 + 33445071 acctag i panTro5.chr21 C 0 I 13 s gorGor5.CYUI01015003v1 3211379 6 - 13858734 acctag i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C e panPan2.chr21 17272680 27 + 46275980 I a score=1137.000000 s hg38.chr21_KI270874v1_alt 21039 12 + 166743 gcattaccattc s gorGor5.CYUI01015003v1 3211385 12 - 13858734 gcattaccattc i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C e panPan2.chr21 17272680 27 + 46275980 I e panTro5.chr21 3643809 13 + 33445071 I a score=66306.000000 s hg38.chr21_KI270874v1_alt 21051 332 + 166743 aggacatag-gtatgggcaaggacttcatgtctgaaaca---ccaaaagc--aatggcaacaaaagacaaaattga-caaatgggatctaa-ttaaactaaagagcttctacacagcaaaataaactaccatcagagtgaacaggcaacctacaa-aatgggagaaaattttcgcaacttactcatctgacaaagggctaatatccagaatct--agaatgaa-ctcaaa-caaatttacaagaaaaaaaaaaa--caaccccatcaaaaagtggccaaagg--acatgaacaga---caattctcaaaagaagacatttatgcagccgaaaaacacatgaaaaaatgctca s panTro5.chr21 3643822 341 + 33445071 gggacatagcgtatgggcaaggatttcatgt-tgaaacaacaccaaaagcccaatggcaacaaa-gccaaaattgaacaaatgggatctaaattaaactaaagaacttctacacagcaaaagaaactaccatcaga-tgaac--gcaactaacaacaatgggagaaa-ttttcgcaacctactcatctgacaaagggctaatatccagaatcataataatgaagctcaaagcaaattagcaagaaaaaaaaaac----accccattaaaaagtggccaaaagcgacatgaaacgagagcaattctcaaaagaagacatttatgcagccaaaaaacacatgaaaaa-tgctca i panTro5.chr21 I 13 C 0 s gorGor5.CYUI01015003v1 3211397 334 - 13858734 aggacatag-gtatgggcaaggacttcatgtctgaaaca---ccaaaagc--aatggcaacaaaagacagaattga-caaatgggatctaa-ttaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaaaaggcaacctacaa-aatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatct--acaatgaa-ctcaaa-caaatttacaagaaaaaaaaaaaaaaaaccccatcaaaaagtggacgaagg--acatgaacaga---caattctcaaaagaaaacatttatacagccaaaaaacacatgagaaaatgctcg i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C e panPan2.chr21 17272680 27 + 46275980 I a score=346333.000000 s hg38.chr21_KI270874v1_alt 21383 797 + 166743 ccatcactggcc-atcagagaaatgcaaatcaaaaccacaatgagatac--catctcacaccagttagaatggcaatcattaaaaagtcaggaaaca-acaggtgctgg-agaggatgtggagaaataggaatacttttacact-gttggtgagactgtaaacta-gttcaacccttgtggaa-gtca--gtgtggtgattcctcag-ggatctagaactagaaatacca-tttgacccagccatcccattactgggtatatacccaaaggactataaatcatgc--tgctttaaagacacatgcacatgtatgtttattgc-agcactattcacaatagcaaagacttggaac-caacccaaatgtccaac-aatgatagactgg-attaagaaaatgtggcacatatacac-cacgggatact-atg-cagccataaaaaa-tgatgagttca-cgtcctttgtagggacatggatgaaattggaaatcatcattctcaataaactatcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaa---ttgaacaa-tgagaacacat-ggacacaggaaggggaaaatcacac-tctggggactgtt-tggggtggggggaggctggagg-gatggcattgg-gagatatacctaatgcta--gatgatgagttagtgggtgcagcgcac-cagcaaggcacatgtatacatatgtaactaacctgtacatt-gtgca-catgtaccctaaaacttaaagtataataataaaaaat-aaaTT--TAAAAAATAAAGGTGAAAAAGACACAAAGGAAAAAAA-T s panTro5.chr21 3644163 820 + 33445071 ccatcactggcccatcagagaaatccaaatcaaaaccacaatgagatacaccatctcacacgagttagaatggcaatcattaaaaagtcaggaacaacacaggtgctgggagaggatgtggagaaatagaactacttttacactagttggtgggactgtaaactaagttcaacccttgtggaaagtcattgggtggtgatccctcagcggatctagaactaga--taccaatttgacccagc-atcc-attactgtata-atacccaa-ggactataaatcatgcgctgctataaagacacatgcacacg-aggtttattgccggcactattcacaatatcaaagacttggaggacaacacaaat-tccaaccaatgata-attggtattaagaca-tgtgccacatatacacgcatggaatacttatggcagccataaaaaaatgatgagttcagcgtcctt-gtaggga-atggatgaaattggaaatcatcattctcaataaactatcgcaagaacacaaaaaccaacaccacatattctcactcataggtgggaacagtgaaacaactgagaacacataggacacagaagcgggaacatcacacgtctggcgactgttgtggagtggggggaggctggaggagatggcattggcgagatcatcctaatgctaatgatgacgagttagtgggtgcagcgcacacagcaaggcacatgtatacatatgtaactaacctgtacatttgtgcaacatctaccctaaaact-aaagta-aataataaaaa-T-AATTT--TAAAAAATAAAGGTGAAAAAGACACAAAGGAAAAAAAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17272707 800 + 46275980 ccatcactggcc-atcagagaaatgcaaatcaaaaccacaatgagatac--catctcacaccagttagaatggcaatcattaaaaagtcaggaaaca-acaggtgctgg-agaggatgtggagaaataggaatacttttacact-gttggtgggactgtaaacta-gttcaacctttgtggaa-gtca--gtgtggtgattcctcag-ggatctagaactagaaatacca-tttgacccagccatcccattactgggtatatacccaaaggactataaatcatgc--tgctataaagacacatgcacacgtaggtttattgc-ggcactattcacaatagcaaagacttggaac-caacccaaatgtccaac-aatgatagagtgg-attaagaaaatgtggcacatatacac-catggaatact-atg-cagccataaaaaaatgatgagttca-cgtcctttgtagggacatggatgaaattggaaatcatcattctcaataaactatcgcaagaacaaaaaaccaaacaccgcatattctcactcataggtgggaa---gtgaacaa-tgagaacacat-ggacacaggaaggggaacatcacac-tctggggactgttgtggggtggggggaggctggagg-gatggcattgg-gagatatacctaatgcta--gatgacgagttagtgggtgcagcgcac-cagcaaggcacatgtatacatatgtaactaacctgtacatt-gtgca-catgtaccctaaagcttaaagtataataataaaaaataaaTTT--TAAAAAATAAAGGTGAAAAAGACACAAAGGAAAAAAA-T i panPan2.chr21 I 27 C 0 s gorGor5.CYUI01015003v1 3211731 798 - 13858734 ccatcactggcc-ataagagaaatgcaaatcaaaagcacaatgagatac--catctcacaccagttagaatggcaatcattaaaaagtcaggaaaca-acaggtgctgg-agaggatgtggagaaataggaacacgtttacact-gttggtgggactgtaaacta-gttcaacccttgtggaa-gtca--gtgtggcgattcctcag-ggatctagaactagaaatacca-tttgacccagccatcccattactgggtatatacccaaaggactataaatcatgc--tgctataaagacacattcacgcgcatgtttattgc-ggcactattcccaatagcaaagacttggaac-caacccaaatgtccaac-aatgatagactgg-attaagaaaatgtggcacatatacac-catggaatact-atg-cagccataaaaaa-tgataagttca--atcatttgtagggacatggatgaaattggaaatcatcattctcagtaaactatcgcaagaacaaaaaaccaaacaccacatattctcactcataggtgggaa---ttgaacaa-tgagaacacat-ggacacaggaaggggaacatcacac-tctggggactgttgtggggtggggggaggggggagg-gatggcattgg-gagatatacctaatgcta--gatgacgagttagtgggtgcagcacac-cagcatggcacatgtatacatatgtaactaacctgcacatt-gtgca-cctgtaccctaaaacttaaagtataataataataaat-aaaTTTGTAAAAAAAAAAGGTGAAAAAGACACAAAGGAAAATAA-- i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e micMur3.chr31 19157661 27 + 47401472 I e otoGar3.GL873528 20722338 0 - 38779656 C e aotNan1.NW_018487195v1 8694116 0 + 9889416 C e cebCap1.NW_016107322v1 9570784 0 - 14377064 C e saiBol1.JH378168 4996243 0 + 13128814 C e calJac3.chr21 21885405 0 + 50472720 C e canFam3.chr31 13783232 0 + 39895921 C e mm10.chr16 78093172 9 + 98207768 I e colAng1.NW_012120598v1 129958 0 - 13750039 C e cerAty1.NW_012002954v1 8382109 0 + 21915920 C e macNem1.NW_012019910v1 8651055 0 + 9440265 C e manLeu1.NW_012102865v1 2125857 0 + 4234846 C e chlSab2.chr2 14958496 0 - 90373283 C e macFas5.chr3 162173042 0 - 192294377 C e rheMac8.chr3 155350339 0 - 185818997 C e nomLeu3.chr25 4395001 0 + 32716333 C a score=186120.000000 s hg38.chr21_KI270874v1_alt 22180 12 + 166743 ATTTTGCATTTT s panTro5.chr21 3644983 12 + 33445071 ATTTTGCATTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17273507 12 + 46275980 ATTTTGCATTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212529 12 - 13858734 ATTTTGCATTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395001 12 + 32716333 ATTTTGCATTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350339 12 - 185818997 ATTTTGCATTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173042 12 - 192294377 ATTTTGCATTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651055 12 + 9440265 ATTTTGCATTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382109 12 + 21915920 ATTTTGCATTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958496 12 - 90373283 ATTTTGCATTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125857 12 + 4234846 ATTTTGCATTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129958 12 - 13750039 ATTTTGCATTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885405 12 + 50472720 ATTTTGCATTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996243 12 + 13128814 ATTTTGCATTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570784 12 - 14377064 ATTTTGCATTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694116 12 + 9889416 ATTTTGCATTTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19157688 12 + 47401472 ATTTTGCATTTT i micMur3.chr31 I 27 C 0 s otoGar3.GL873528 20722338 12 - 38779656 ATTTTGCCTTTT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13783232 12 + 39895921 ATTTTGCATTTT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C e mm10.chr16 78093172 9 + 98207768 I a score=16511.000000 s hg38.chr21_KI270874v1_alt 22192 1 + 166743 G s panTro5.chr21 3644995 1 + 33445071 G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17273519 1 + 46275980 G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212541 1 - 13858734 G i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395013 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350351 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173054 1 - 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651067 1 + 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382121 1 + 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958508 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125869 1 + 4234846 G i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129970 1 - 13750039 G i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885417 1 + 50472720 G i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996255 1 + 13128814 G i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570796 1 - 14377064 G i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694128 1 + 9889416 G i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19157700 1 + 47401472 G i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20722350 1 - 38779656 G i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78093181 1 + 98207768 G i mm10.chr16 I 9 C 0 s canFam3.chr31 13783244 1 + 39895921 A i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3554661 0 - 6883506 C a score=255514.000000 s hg38.chr21_KI270874v1_alt 22193 16 + 166743 ACT--ATAGAATTAGC-AA s panTro5.chr21 3644996 18 + 33445071 ACTTGATA-AATTAGCCAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17273520 16 + 46275980 ACT--ATAGAATTAGC-AA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212542 16 - 13858734 ACT--ATAGAATTAGC-AA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395014 16 + 32716333 ACT--ATAGAATTAGC-AA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350352 16 - 185818997 ACT--ATAGAATTAGC-AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173055 16 - 192294377 ACT--ATAGAATTAGC-AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651068 16 + 9440265 ACT--ATAGAATTAGC-AA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382122 16 + 21915920 ACT--ATAGAATTAGC-AA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958509 16 - 90373283 ACT--ATAGAATTAGC-AA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125870 16 + 4234846 ACT--ATAGAATTAGC-AA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129971 16 - 13750039 ACT--ATAGAATTAGC-AA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885418 16 + 50472720 ACT--ATAGAATTAGC-AA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996256 16 + 13128814 ACT--ATAGAATTAGC-AA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570797 16 - 14377064 ACT--ATAGAATTAGC-AA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694129 16 + 9889416 ACT--ATAGAATTAGC-AA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19157701 16 + 47401472 ACT--ATAGAATTATC-AA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20722351 16 - 38779656 ACT--ATAGAATGAAC-AA i otoGar3.GL873528 C 0 I 329 s mm10.chr16 78093182 16 + 98207768 ACT--ATAGCATAAGC-AC i mm10.chr16 C 0 C 0 s canFam3.chr31 13783245 16 + 39895921 ACT--ATAGAATTAAC-AA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3554661 16 - 6883506 ACT--ATAGAAGTAGC-AA i dasNov3.JH568778 C 0 C 0 a score=1340815.000000 s hg38.chr21_KI270874v1_alt 22209 87 + 166743 CAGGAAGGCA-TTTTAATTAAGGTTACACTCATTTCATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTCCTGGCAA s panTro5.chr21 3645014 85 + 33445071 CAGGAAGGCA-TTTTAATTAAG-TTACACTCATTCAATATTATATTTCTTAATCTGTTATTGTTATCAGGCATATGTGCTCCTG-CAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17273536 87 + 46275980 CAGGAAGGCA-TTTTAATTAAGGTTACACTCATTTCATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTCCTGGCAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212558 87 - 13858734 CAGGAAGGCA-TTTTAATTAAGGTTACACTCATTTCATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTCCTGGCAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395030 87 + 32716333 CAGGAAGGCA-TTTTAATTAAGGTTACACTCATTTCATATTATATTTTCTCATCTGTTATTGTTATGAGGCATATGTGCTCCTGGCAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350368 87 - 185818997 CAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTTCTGGCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173071 87 - 192294377 CAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGACGCATATGTGCTTCTGGCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651084 87 + 9440265 CAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGACGCATATGTGCTTCTGGCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382138 87 + 21915920 CAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTTCTGGCAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958525 87 - 90373283 CAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTTCTGGCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125886 87 + 4234846 CAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTTCTGGCAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 129987 87 - 13750039 CAGGATGGCA-TTTTAATTAAGGTTACACTCATTTTATATTATATTTTCTAATCTGTTATTGTTATGAGGCATATGTGCTTCTGGCAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885434 88 + 50472720 CAGGAAGGCATTTTTAATTAAGGTTACACTCATTTCATATTATATTTTATAATCTTTTATTGTTATGAGGATCATGTGCTCCTGGCAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996272 88 + 13128814 CAGGAAGGCATTTTTAATTAAGGTTACACTCATTTCatattatattttataatattttattGTTATGAGGAATATGTGCTCCTGGCTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570813 88 - 14377064 GAGGAAGGTATTTTTAATTAAAGTTACACTCATTTCATATTATATTTTATAATCTTTTATTGTTATGAGGAATATGTGCTCCTGGCAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694145 88 + 9889416 CAGGAAGGCATTTTTAATTAAGGTTACACTCATTTCATATTATATTTTATAATATTTTATTGTTATGAGGAATATGTGCTCCTGGCAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19157717 87 + 47401472 CAGGAGAGCA-TTTTAATTAAAGTTACACTCATTTTACATTATATTTTCTAATACTTTATTGTTATGAGGGATACATGCTCCTGGCAA i micMur3.chr31 C 0 I 1394 s otoGar3.GL873528 20722696 87 - 38779656 CAGGAAAGCA-TTTTAATTAAAATCACACTCATTTTACTTTATATTTTCTAATGCTTTATAGTTATAAGTAATACATGCTCCTGGCAA i otoGar3.GL873528 I 329 C 0 s mm10.chr16 78093198 85 + 98207768 AGGGAGATCA-TTTTAATTAAGGCTACATTCATTTTACATTATACCTTCTAATGCTTTATTGGCGTGAGGAGTTTGTACCCCTGAC-- i mm10.chr16 C 0 C 0 s canFam3.chr31 13783261 87 + 39895921 CAGGAAAGGA-TTTTAATTAAGGTTACACTCATTTTACATTCTATTTTCTAATGCTTTATTGTTATGAGGAATGTGTGCTCCTGGCAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3554677 87 - 6883506 CAGGAAAGCA-TTTTAATTAAGGTTACACTCATTTCACATTATATTTTCTAATACTTTATTATTATGAGAAATATGTGCTTCTGACAA i dasNov3.JH568778 C 0 C 0 a score=1075843.000000 s hg38.chr21_KI270874v1_alt 22296 95 + 166743 TATGG---TGAAGAGAATCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAGTGC------TCATGATTTCTATGGCGAGACTAGTG---GGGGCCATGGAGT-GAA s panTro5.chr21 3645099 96 + 33445071 CATGGGTGTGAAGAGAATCTCTCTAATCATTGATCTT-CTTCCTGAGG-AAAGTGC------TCATGATTTCTATGGCGAGACTA-TG---GGGGCCATGGAGTTGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17273623 95 + 46275980 CATGG---TGAAGAGAATCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAGTGC------TCATGATTTCTATGGCGAGACTAGTG---GGGGCCATGGAGT-GAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212645 95 - 13858734 CATGG---TGAAGAGAATCTCTCTGAATATTGATATTTCTTCCTGAGGGAAAATGC------TCATGATTTCTATGGCGGGACTAGTG---GGGGCCATGGAAT-GAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395117 95 + 32716333 CATGA---TGAAGAGAATCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAATGC------TCATGATTTCTATGGCGGGACTAGTG---GGGGCCATGGAGT-GAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350455 95 - 185818997 CATGA---TGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GGGGCCATGGAGT-GAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173158 95 - 192294377 CATGA---TGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GGGGCCATGGAGT-GAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651171 95 + 9440265 CATGA---TGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GGGGCCATGGAGT-GAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382225 95 + 21915920 CATGA---TGAAGAGAATCTCTCTGAATATTCATCTTTCCCCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTA---GGGGCTATGGAGT-GAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958612 95 - 90373283 CATGA---TGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GAGGCCACGGAGT-GAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2125973 95 + 4234846 CATGA---TGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTATGGCAGGACTAGTG---GGGGCCATGGAGT-GAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 130074 95 - 13750039 CATAA---TGAAGAGAATCTCTCTGAATATTCATCTTTCCTCCTGAGTGAAAATGC------TCATGATTTCTGTGGCAGGACTAGTG---GGGGCCATGGAGT-GAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885522 94 + 50472720 CATGA---TGAAGAGAAGCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAATGC------TCATGATTCCAAT-GTGAGACTAGAG---GGGGCCATGGAGT-GAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996360 95 + 13128814 CCTGA---TGAAGAGAAGCTCTCTTAATATTGATCTTTCTTCCTAAGGGAAAATGC------TCATGATTTCTATGGCGAGACTAGTG---GGGGTCATGGAGT-GAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570901 95 - 14377064 CATGA---TGAAGAGAAGCTCTCTGAATATTGATCTTTCTTCCTAAGGGAAAATGC------TCATGATTTCTATGGTGAGACTAGTG---GGGGCCGTGGAGT-GAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694233 95 + 9889416 CATGA---TGAAGAGAAGCTCTCTGAATATTGATCTTTCTTCCTGAGGGAAAATGC------TCATCATTTCTATGGCGAGACCAGTG---GGGGCCATGGAGT-GAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20722783 82 - 38779656 CACAT---TAAAGACAGA----CTGAATTTTGACTCTTGTTACTGAAAGAAAATGC------TCCTGA---------AAGGACAAGTG---GGGGTCATGGAGT-GAA i otoGar3.GL873528 C 0 I 1108 s mm10.chr16 78093283 95 + 98207768 -ATAT---TAAGGAGACCCTTTCTGCCTGGGGATCATTTCTCCTGCAGGAAACTAT------TGGGAGTGACTGCTGACAGACTCATGTTCGGGGC--TCAGAT-GAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13783348 100 + 39895921 CATGT---TGAAGACAGCCTCTCTAAATTGTGATCCTTCTTCCTCAGGGAAAATGCCACTGTTCCTGATTACTGTGGAGGGACCAGT----GGGGCCACGGAGA-AAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3554764 94 - 6883506 CATGT---GGAAGGGTAT---TCTAAATTGTGATCCTTCTTT----GGGAAAATGCCACTGCTCATGATGACTGTGGCAGGGCTAGTG---AACACTGAAGAGT-AAA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157804 1394 + 47401472 I a score=128738.000000 s hg38.chr21_KI270874v1_alt 22391 10 + 166743 GTGGCACAAC s panTro5.chr21 3645195 10 + 33445071 GTGGCACAAC i panTro5.chr21 C 0 I 1 s panPan2.chr21 17273718 10 + 46275980 GTGGCACAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212740 10 - 13858734 GTGGCACAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395212 10 + 32716333 GTGGCATAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350550 10 - 185818997 GTGGCATAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173253 10 - 192294377 GTGGCATAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651266 10 + 9440265 GTGGCATAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382320 10 + 21915920 GTGGCATAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958707 10 - 90373283 GTGGCATAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126068 10 + 4234846 GTGGCATAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 130169 10 - 13750039 GTGGCATAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885616 10 + 50472720 GTGGCATAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996455 10 + 13128814 GTGGCATAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9570996 10 - 14377064 GTGGCATAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694328 10 + 9889416 GTGGCATAAC i aotNan1.NW_018487195v1 C 0 C 0 s mm10.chr16 78093378 10 + 98207768 GGGGCTCAGC i mm10.chr16 C 0 I 3140 s canFam3.chr31 13783448 10 + 39895921 GAGGCATAAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3554858 10 - 6883506 GAGAGACAAC i dasNov3.JH568778 C 0 I 2863 e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 20722865 1108 - 38779656 I a score=88944.000000 s hg38.chr21_KI270874v1_alt 22401 9 + 166743 GAAGAGTTA s panTro5.chr21 3645206 9 + 33445071 GAAGAGTTA i panTro5.chr21 I 1 C 0 s panPan2.chr21 17273728 9 + 46275980 GAAGAGTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212750 9 - 13858734 AAAGAGTTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395222 9 + 32716333 GAAGAGTTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350560 9 - 185818997 CAAGAGTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173263 9 - 192294377 CAAGAGTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651276 9 + 9440265 CAAGAGTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382330 9 + 21915920 CAAGAGTTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958717 9 - 90373283 CAAGAGTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126078 9 + 4234846 CAAGAGTTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 130179 9 - 13750039 CAAGAGTTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885626 9 + 50472720 CAAGAATTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996465 9 + 13128814 CAAGAGTTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571006 9 - 14377064 CAAGAGTTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694338 9 + 9889416 CAAGAGTTA i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13783458 9 + 39895921 AAAGAGTTA i canFam3.chr31 C 0 I 1324 e dasNov3.JH568778 3554868 2863 - 6883506 I e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 20722865 1108 - 38779656 I e mm10.chr16 78093388 3140 + 98207768 I a score=196026.000000 s hg38.chr21_KI270874v1_alt 22410 18 + 166743 GAA---CCGT-ATACAGAAAAA s panTro5.chr21 3645215 20 + 33445071 GAAT--CCGTTATACAGAAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17273737 18 + 46275980 GAA---CCGT-ATACAGAAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212759 21 - 13858734 GAAGAACCGT-ATACAGAAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395231 21 + 32716333 GAAGAACCGT-ATACAGAAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350569 21 - 185818997 GAAGAACCAC-ACACAGAAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173272 21 - 192294377 GAAGAACCAC-ACACAGAAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651285 21 + 9440265 GAAGAACCAC-ACACAGAAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382339 21 + 21915920 GAAGAACCAC-ACACAGAAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958726 21 - 90373283 GAAGAACCAC-ACACAGAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126087 21 + 4234846 GAAGAACCAC-ACACAGAAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 130188 21 - 13750039 GAAGAACCAC-ACACAGAAAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21885635 21 + 50472720 GAAGAACCAT-ATACAGAAAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996474 21 + 13128814 GAAGAACCAT-ATACAGAAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571015 21 - 14377064 GAAGAACCAT-ACATAGAAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694347 21 + 9889416 GAAGAACCAT-ATACAGAAAAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 18056286 19 + 38779656 --AGAAATGG-ACACAGCGAAA i otoGar3.GL873528 n 1108 C 0 s canFam3.chr31 26111960 18 - 39895921 ---gaaccag-aCACAGCAAAA i canFam3.chr31 n 1324 C 0 e dasNov3.JH568778 3554868 2863 - 6883506 I e micMur3.chr31 19157804 1394 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I a score=2900332.000000 s hg38.chr21_KI270874v1_alt 22428 257 + 166743 AAATTACAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCACCCAATATTAGTAATTAAGTCAGCA-ACA-ATGACAAGACGGGAACTTGAAAGAAAATTTATCATG--ACATAACTCACACAC-CTCTTAACTGAAGT-GG-CCTTATaaaggatt--agagctaaatagccacctgttgtttgagcagtgagttaaaggagagcagtactttgctgaaacaatggcttaaggaagca s panTro5.chr21 3645235 262 + 33445071 AA-TTACAAC---TTTCATAGCCAGATAAGACATTCTAAAGCTCTAGTGACAGTAAACA-CATATATCAAGATCACCCAATATTAGTAATTAAGTAGGCACACAGATGACAAGACATGAACTGAATAGAAAATT-ATTATG--ATATAACTCACACACACTCTTAACTGAAGT-GG-CCTTATAAAGGATATAAGAGCTAAATAACCACCTGTTGTTTGAGCAGTGAGTGAAAGGAGAGCA-TACTTTgctgaaacaatggcttaaggaagca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17273755 257 + 46275980 AAATTACAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCACCCAATATTAGTAATTAAGTCAGCA-ACA-ATGACAAGACAGGAACTTGAAAGAAAATTTATCATG--ACATAACTCACACAC-CTCTTAACTGAAGT-GG-CCTTATaaaggatt--agagctaaatagccacctgttgtttgagcagtgagttaaaggagagcagtactttgctgaaacaatggcttaaggaagca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3212780 257 - 13858734 AAATTACAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATTACCCAATATTAGTAATTAAGTCAGCA-ACA-ATGACAAGACAGGAACTTGAAAGAAAATTTATCATG--ACATAACTCACACAC-CTTTTAACTGAAGT-GG-CCTTATaaaggatt--agagctaaatagccacctgttgtttgagcagtgagttaaaggagagcagtactttgctgaaacaatggcttaaggaagca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395252 256 + 32716333 AAATTACAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCACCCAATATTAGTAATTAAGTCAGCA-AC--ATGACAAGACAGGAACTTTAAAGAAAATTTATCATG--ACATAACTCACATAC-CTCTTAACTGAAGT-GG-CCTTATAAAGGATT--AGAGCCAAATAGCCACCTGTTGTTTGAGCAGTGAGTTAAAGGAGAGCAGTACTTTGCTGAAACAATGACTTAAGGAAGCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350590 257 - 185818997 AAATTCCAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCCCCCAATATTACTAATTAAGTCAGCA-ACA-ATGACAAGACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACAC-CTCTTAACTGAAGT-GG-CCTTATaaaggatt--agaaccgaatagccacatgttgtttgaatagtgagttaaaagacagcagtactttgctgaaacaatggcttaaggaagca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173293 257 - 192294377 AAATTCCAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCCCCCAATATTACTAATTAAGTCAGCA-ACA-ATGACAAGACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACAC-CTCTTAACTGAAGT-GG-CCTTATAAAGGATT--AGAACCGAATAGCCACATGTTGTTTGAATAGTGAGTTAAAAGACAGCAGTACTTTgctgaaacaatggcttaaggaagca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651306 257 + 9440265 AAATTCCAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCACCCAATATTACTAATTAAGTCAGCA-ACA-ATGACAAGACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACAC-CTCTTAACTGAAGT-GG-CCTTATaaaggatt--agaaccgaatagccacatgttgtttgaatagtgagttaaaagagagcagtactttgctgaaacaatggcttaaggaagca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382360 252 + 21915920 AAATTCCAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCACCCAATATTACTAATTAAGTCAGCA-ACA-AT-----GACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACAC-CTCTTAACTGAAGT-GG-CCTTATAAAGGATT--AGAACCGAATAGCCACATGTTGTTTGAATAGTAAGTTAAAAGAGAGCAGTACTTTgctgaaacaatggcttaaggaagca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14958747 257 - 90373283 AAATTCCAAT---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCACCCAATATTACTAATTAAGTCAGCA-ACA-ATGACAAGACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACAC-CTCTTAACTGAAGT-GG-CCTTATaaaggatt--agaaccgaatagccacatgttgttcgaatagtgagttaaaagagagcagtactttgctgaaacaatggcttaaggaagca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126108 257 + 4234846 AAAATCCAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTAGTGACAGTAAACAACATAT-TCAAGATCACCCAATATTACTAATTAAGTCAGCA-ACA-ATGACAAGACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACAC-CTCTTAACTGAAGT-GG-CCTTTTaaaggatt--agaaccgaatagccacatgttgtttgaatagtgagttaaaagagagcagtactttgctgaaacaatggcttaaggaagca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 130209 257 - 13750039 AAATTCCAAC---TTTCATAGC-AGATAAGACAT-CTAAAGC-CTACTGACAGTAAACAACATAT-TCAAGATCACCCAATATTACTAATTAAGTCAGCA-ACA-ATGACAAAACAAGACCTTAAAAGAAAATTTATCATG--ACATAATTCACACAC-CTCTTAACTGAAGT-GG-CCTTATGAAGGATT--AGAACCGAATAGCCACATGTTGTTTGAATAGTGAGTTAAAGGAGAGCAATACTTTGCTGAAACAATGGCTTAAGGGAGca i colAng1.NW_012120598v1 C 0 I 16261 s calJac3.chr21 21885656 256 + 50472720 AATTTACAAC---TTTCATAGC-AGGTAAGACAT-ATAAAGC-CTAGTGAGAGTAAACAACATAT-TCAAGATCACCCAGTTTTACTAATTAAGTCAGCA-ACA-ATGCCAAGACAGGATCTTGAAAGAAATTTT-TTTGT--ACGTAACTCACATAC-CTCTTAACTGAAGA-GG-CCTTATAAAAGATT--AGAGCCAAATAGCCACATGTTGCTtgagcagtgagttaattgagaacagtattttgctgaaacaatggcttaaggaagca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996495 255 + 13128814 AA-TTACAAC---TTTAATAGC-AGGTAGGACAT-ATAAAGC-CTAGTGAGAGTAAACAACATAT-TTAAGATCACCCAGTTTTACTAATTAAGTCAGCA-ACA-ATGCCAAGACAGGATCTTGAAAGAAAATTT-TTTTG--ATGTAACTCACATAC-CTCTTAACTGAAGT-GA-CCTTATAAAAGATT--AGAGCCAAATAGCCACATGTTGCTTGAGCAGTGAGTTAAAGGAGAGCAGTATTTTgctgaaataatagcttaaggaagca i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571036 241 - 14377064 AA-TTACAAC---TTTCATAGC-AGGTAAGACAT-ATAAAGC-CTAGTGAGAGTAAACAACATAT-TCAAGATCACCCAGTTTTACTAATTAAGTCAGCA-ACA-ATGCCAAGACAGGATCTTGAAAGGAAATTT-TTTTG--ACATAACTCACATAC-CTCTTAACTGAAGT-GG-CCTTATAAAAGATT--AGAGCCAAATAGCCACA--------------TGAGTTAAAGGAGAGCAGTATTTTgctgaaataatagcttaaggaagca i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694368 256 + 9889416 AAATGACAAC---TTTCATAGC-AGGTAAGACAT-ATAAAGC-CTAGTGAGAGTAAACAACGTAT-TCAAGATCACCCAGTTTTACTAATTAAGTCAGCA-ACA-ATGCCAAGACAGGATCTTGAAAGAAAATTT-TTTTG--GCATAACTCACATAC-CTCTTAACTGAAGT-GG-CCTTATAAAAGATT--AGAGccaaatagccacatggtgcttgagcagtgaggtaaaggagagcagtattttgctgaaataatagcttaaggaagca i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 18056305 245 + 38779656 AG--TATAGC---TTTCATAGG-GGCTGAGATAT-CTAGACC-CTGGTGAGAGTAAGCAATGTAT-TCAAGATCATTCAATTTTATTCATTAGGTCAGGA-ACA-ATGACAAGACAAGATTTTGAGGGAAAATTTACTATG--ACATAACGCATAGAT-CTGTCAACTGAAATAGG-CCTGATAGAGGATT--AGAGCCAAATATCCAGATGTTGCTTGAACAGGGAGCTGAAG-----------TTAACTgaaaagaagctttaaggaagca i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 26111978 249 - 39895921 A--TTACAAC---TTTAATAGC-AGATAAGAGAT-CTAAA-C-CTAGTCAGGGTAAACAATATAT-TCAGTATCATCCAACTATATTAATTATTTCAGCA-ACA-ATGACAAGATTGGATATTGAATTAAAATTTATCATGGTGCACAACTCATGTAT-TTCTTGACTGAAATGGG-TCTGATAAAGAATC--AG--------GGTTATATGCTTCTTAAGtggtaagctgaaggagaataatagcaacccaaaacagtagttcaaggatgca i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3327717 254 + 6883506 AAATTGCAGCAAATTTCATAAC-AGATAG------TTAAACT-TTACTAAGGGTAA-CAACATAT-TTAAGATCAATCAATCTTATTAATTAACTCAACA-ATA-ATGACAAGACA-GACCTTGAATGAAAATTCATCACA--GCACAACTTATGCAC-CTCTTGAGTGTAAT-GGACCTGATAAAGAATG--AGAGCCAAATAGCCACATACTCCTTCAATGGTATGCTGCAGGAGAGCACTggcaagctgaaatcatagtttaagtataca i dasNov3.JH568778 n 2863 C 0 e micMur3.chr31 19157804 1394 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I a score=872399.000000 s hg38.chr21_KI270874v1_alt 22685 87 + 166743 gtgatgt------acatcttcaaataacatgc-tgtggctgtgtctggcaggga-aacaagcgaatgataggctggcttgcac-acta-cattcaag s panTro5.chr21 3645497 88 + 33445071 gtgatgt------acatcttcaaataacatgc-tgtggctgtgtctggcaggga-aacaagcgaatgataggctggcttgcacgacta-cattcaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274012 87 + 46275980 gtgatgt------acatcttcaaataacatgc-tgtggctgtgtctggcaggga-aacaagcgaatgataggctggcttgcac-acta-cattcaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213037 87 - 13858734 gtgatgt------acatcttcaaataacatgc-tgtggctgtgtctggcaggga-aacaagcgaatgataggctggcttgcac-acta-cattcaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395508 87 + 32716333 GTGATGT------ACATCTTCAAATAACATGC-TGTGGCTGTGTCCGGCACGGA-AACAAGCGAATGATAGGCTGGCTTGCAC-ACTA-CATTCAAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350847 87 - 185818997 gtgaggc------acatcttcaaacaacatgc-tgtggctgtgactggcaggga-aacaagtgactgatagactggcttgcac-acta-cattcaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173550 87 - 192294377 gtgaggc------acatcttcaaacaacatgc-tgtggctgtgactggcaggga-aacaagtgactgatagactggcttgcac-acta-cattcaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651563 87 + 9440265 gtgaggc------acatcttcaaacaacatgc-tgtggctgtgactggcaggga-aacaagtgactgatagactggcttgcac-acta-cattcaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382612 87 + 21915920 gtgaggc------acatcttcaaacaacatgc-tgtggctgtgactggcaggga-aacaagtgactgagagactggcttgcac-acta-cattcaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959004 85 - 90373283 gtgaggc------acatcttcaaacaacatgc-tgtggctgtgactggcaggga-cacaagtgactgat--actggcttgcac-acta-cattcaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126365 87 + 4234846 gtgaggc------acatcttcaaacaacatgc-tgtggctgtgactggcaggga-aacaagtgactgatagactggcttgcac-acta-cattcaaa i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21885912 88 + 50472720 gtgatgc------acatcttcagataacattt-tgtgactgtgcctggcagggagaacaagtgactgataggctggcttacac-acta-cattcaag i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996750 88 + 13128814 gtgatgc------acatcttcaaataacattt-tgtgactgtgcctggcagggagaacaagtgactgataggctggcttacac-acta-cattcaag i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571277 88 - 14377064 gtgatgc------acatcttcaaataacattt-tgtgactgtgcttggcagggagaacaacggactgataggctggcttacac-acta-cattcaag i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694624 88 + 9889416 gtgatgt------gcatcttcaaataacattt-tgtgactgtgcctggcagggagaacaagtgactgataggctggcttacac-gcta-cattcaag i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 18056550 87 + 38779656 gcgatgt------acatcttcagacaatgtgc-tgtgactgtgtcatgctggga-aactactggcagataggctggtttacaC-TCTG-TTTCCAAG i otoGar3.GL873528 C 0 n 0 s canFam3.chr31 26112227 92 - 39895921 gtgatactcagtaacatagccagataacatgt-tataactgtggcttgctggga-aacaagtagcagataggctag-ttgtac-acag-tacccaaa i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3327971 89 + 6883506 gtgatac------acatttttaaataaaatgctttttgctggggactgctggtg-aataaagagcagataggctggcttgcat-acagttacccaag i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157804 1394 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=131306.000000 s hg38.chr21_KI270874v1_alt 22772 12 + 166743 gatgagtggatc s panTro5.chr21 3645585 11 + 33445071 -atgaggtgATC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274099 12 + 46275980 gatgagtggatc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213124 12 - 13858734 gatgaatggatc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395595 12 + 32716333 GATGAGTGGATC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350934 12 - 185818997 gatgagtggatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173637 12 - 192294377 gatgagtggatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651650 12 + 9440265 gatgagtggatc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382699 12 + 21915920 gatgagtggatc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959089 12 - 90373283 gatgagtggatc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126452 12 + 4234846 gatgagtggatc i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21886000 12 + 50472720 gatgagtggatc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996838 12 + 13128814 gatgagtggatc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571365 12 - 14377064 gatgagtggata i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694712 12 + 9889416 gatgtgtggatc i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 26112319 12 - 39895921 gatgagtagata i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3328060 12 + 6883506 gatgaatggatc i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 18056637 0 + 38779656 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=2308.000000 s hg38.chr21_KI270874v1_alt 22784 1 + 166743 t s panTro5.chr21 3645596 1 + 33445071 t i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274111 1 + 46275980 t i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213136 1 - 13858734 t i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395607 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350946 1 - 185818997 c i rheMac8.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651662 1 + 9440265 c i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382711 1 + 21915920 c i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959101 1 - 90373283 c i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126464 1 + 4234846 c i manLeu1.NW_012102865v1 C 0 C 0 s aotNan1.NW_018487195v1 8694724 1 + 9889416 t i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 26112331 1 - 39895921 t i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3328072 1 + 6883506 t i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 18056637 0 + 38779656 I e cebCap1.NW_016107322v1 9571377 0 - 14377064 C e saiBol1.JH378168 4996850 0 + 13128814 C e calJac3.chr21 21886012 0 + 50472720 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e macFas5.chr3 162173649 0 - 192294377 C a score=2548.000000 s hg38.chr21_KI270874v1_alt 22785 1 + 166743 t s panTro5.chr21 3645597 1 + 33445071 t i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274112 1 + 46275980 t i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213137 1 - 13858734 t i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395608 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s aotNan1.NW_018487195v1 8694725 1 + 9889416 t i aotNan1.NW_018487195v1 C 0 I 2 s canFam3.chr31 26112332 1 - 39895921 t i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3328073 1 + 6883506 t i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 18056637 0 + 38779656 I e cebCap1.NW_016107322v1 9571377 0 - 14377064 C e saiBol1.JH378168 4996850 0 + 13128814 C e calJac3.chr21 21886012 0 + 50472720 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8382712 0 + 21915920 C e macNem1.NW_012019910v1 8651663 0 + 9440265 C e manLeu1.NW_012102865v1 2126465 0 + 4234846 C e chlSab2.chr2 14959102 0 - 90373283 C e macFas5.chr3 162173649 0 - 192294377 C e rheMac8.chr3 155350947 0 - 185818997 C a score=7236.000000 s hg38.chr21_KI270874v1_alt 22786 4 + 166743 tctg s panTro5.chr21 3645598 4 + 33445071 tctg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274113 4 + 46275980 tctg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213138 4 - 13858734 tctg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395609 4 + 32716333 TCTG i nomLeu3.chr25 C 0 C 0 s canFam3.chr31 26112333 4 - 39895921 tttg i canFam3.chr31 C 0 T 57565 s dasNov3.JH568778 3328074 4 + 6883506 tctg i dasNov3.JH568778 C 0 n 0 e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 18056637 0 + 38779656 I e aotNan1.NW_018487195v1 8694726 2 + 9889416 I e cebCap1.NW_016107322v1 9571377 0 - 14377064 C e saiBol1.JH378168 4996850 0 + 13128814 C e calJac3.chr21 21886012 0 + 50472720 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8382712 0 + 21915920 C e macNem1.NW_012019910v1 8651663 0 + 9440265 C e manLeu1.NW_012102865v1 2126465 0 + 4234846 C e chlSab2.chr2 14959102 0 - 90373283 C e macFas5.chr3 162173649 0 - 192294377 C e rheMac8.chr3 155350947 0 - 185818997 C a score=241171.000000 s hg38.chr21_KI270874v1_alt 22790 315 + 166743 tttttgtttttg--------tttttttgagatggagtctcgctctgtcgcccaggctgg-agtg-cagtggcacaatt-tctgctcactgcaa--gctctgcctcccgggttcac-gccattctcccgcctcagcctccc-gagtagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttagtagagacagggtttcat--catgttagcc-aggatggtctcgatctcctaacctcatgatctgcccgcctcggcctcccaaagtactgggattacaggcgtgagccaccgcacc-aggccggatgagttgaaagt s panTro5.chr21 3645602 320 + 33445071 tttttgtttttt------gttttttttgagacagagtctcgctctgtcgcc-aggctgggagtggcagtggcacaattctctgctcactgcaacgattccgcctcccgggttcaccgccattctcccgcctcagcctcccagagta-ctggagctacaggcgcccgc-accacacccg-ctaattttt-gtatttttagtagagacagggtttcattccatgttagcccaggatggtctcgatctcgtaacctca--atccgcccgcctcg-cctcccaaagtactgggattacaggcgtgagccaccgcacccggGCCGGATGAGTTGAAGAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274117 317 + 46275980 tttttgtttttt------tgtttttttgagacggagtcttgctctgtcgcccaggctgg-agtg-cagtggcacaatt-tctgctcactgcaa--gctccgcctcccgggttcac-gccattctcccgcctcagcctccc-gagtagctgggactacaggcgcccgccaccacacccgtctaattttttgtatttttagtagagacagggtttcat--catgttagcc-aggatggtctcgatctcctaacctcatgatccgcccgcctcggcctcccaaagtactgggattacaggcgtgagccaccgcacc-gggccggatgagttgaaagc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213142 323 - 13858734 tttttgtttttgtttttttgtttttttgagacggagtctcgctctgtcgcccaggctgg-agtg-cggtggcacaatt-tctgctcactgcaa--gctccgcctcccaggttcat-gccattctcccgcctcagcctccc-gagtagctgggactacaggcgcccaacaccacgcccggctaattttttgtatttttagtagagacggggtttcac--catgttagcc-aggatggtctcgatctcctaacctcgtgatccaaccgcctcggcctcccaaagtattgggattacaggcgtgagccactgcacc-aggccggatgagttgaaagc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395613 323 + 32716333 tttttgtttttgttttcttgtttttttgagatggagtcttgctctgtcgcccaggctag-agtg-cggtggcacaatt-tctgctcactgcaa--gctccacctcctgggttcat-gccattctcctgcctcagcctccc-aagtagctgggactacaggtgcccgccaccacacccggctaattttttgtatttttagtagagatggggtttcac--catgttagcc-aggatggtctcgatctcctaaccttgtgatccgcccgcctcggcttcccaaagtgctgggattacaggcgtgagccaccgcgcc-gggccAGATGAGTTGAAAGC i nomLeu3.chr25 C 0 C 0 e dasNov3.JH568778 3328078 0 + 6883506 I e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 18056637 0 + 38779656 I e aotNan1.NW_018487195v1 8694726 2 + 9889416 I e cebCap1.NW_016107322v1 9571377 0 - 14377064 C e saiBol1.JH378168 4996850 0 + 13128814 C e calJac3.chr21 21886012 0 + 50472720 C e canFam3.chr31 26112337 57565 - 39895921 T e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8382712 0 + 21915920 C e macNem1.NW_012019910v1 8651663 0 + 9440265 C e manLeu1.NW_012102865v1 2126465 0 + 4234846 C e chlSab2.chr2 14959102 0 - 90373283 C e macFas5.chr3 162173649 0 - 192294377 C e rheMac8.chr3 155350947 0 - 185818997 C a score=1577.000000 s hg38.chr21_KI270874v1_alt 23105 1 + 166743 t s panTro5.chr21 3645922 1 + 33445071 C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274434 1 + 46275980 t i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213465 1 - 13858734 t i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395936 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162173649 1 - 192294377 c i macFas5.chr3 C 0 C 0 s calJac3.chr21 21886012 1 + 50472720 t i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996850 1 + 13128814 t i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571377 1 - 14377064 t i cebCap1.NW_016107322v1 C 0 C 0 e dasNov3.JH568778 3328078 0 + 6883506 I e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 18056637 0 + 38779656 I e aotNan1.NW_018487195v1 8694726 2 + 9889416 I e canFam3.chr31 26112337 57565 - 39895921 T e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8382712 0 + 21915920 C e macNem1.NW_012019910v1 8651663 0 + 9440265 C e manLeu1.NW_012102865v1 2126465 0 + 4234846 C e chlSab2.chr2 14959102 0 - 90373283 C e rheMac8.chr3 155350947 0 - 185818997 C a score=16562.000000 s hg38.chr21_KI270874v1_alt 23106 2 + 166743 tt s panTro5.chr21 3645923 2 + 33445071 TT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274435 2 + 46275980 tt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213466 2 - 13858734 tt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395937 2 + 32716333 TT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350947 2 - 185818997 tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173650 2 - 192294377 tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651663 2 + 9440265 tt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382712 2 + 21915920 tt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959102 2 - 90373283 tt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126465 2 + 4234846 tt i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21886013 2 + 50472720 tt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996851 2 + 13128814 tt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571378 2 - 14377064 tt i cebCap1.NW_016107322v1 C 0 C 0 e dasNov3.JH568778 3328078 0 + 6883506 I e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 18056637 0 + 38779656 I e aotNan1.NW_018487195v1 8694726 2 + 9889416 I e canFam3.chr31 26112337 57565 - 39895921 T e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=2014457.000000 s hg38.chr21_KI270874v1_alt 23108 265 + 166743 ctaagcaaagctttcaactatc-cacagcaactaa-acagagaagtcaagacacaaccacgcacta-caaaaagccaat--atcgttga-ccatcatgaaatcattgttatatgagtacca-aatatggaaagactctagggcgtgcTTTCTactttcttgctcctttagatgaggtgtgaccat-gtgactggcattcac-caagaaa--tacaaatagaagtggcatgaaatactttggggcagaaattttaagtgtcagtatgcagtttgcAT s panTro5.chr21 3645925 269 + 33445071 CTAAGCAAAGCTTTCAACTATCGCACAG-ACCTAACAGAGAGAAGTCAAGACACAACCACGCACTAGCAAAAAGCCAATTCATCGTTGAACCATCATGAAATCATTGTTATATGAGTAGCGTAATATGGAAAGACTCTAGGGCATGCTTTCTactttcttgctcctt-agatgaggtgtgaccattgtgactggca---acgcaagaaaattacaaata--agtggcatgaaatactttggggcagaaattttaagtgtcagtatgcagtttgcAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274437 265 + 46275980 ctaagcaaagctttcaactatc-cacagcacctaa-acagagaagtcaagacacaaccaagcacta-caaaaagccaat--atcgttga-ccatcatgaaatcattgttatatgagtacca-aatatggaaaggctctagggcatgcTTTCTactttcttgctcctttagatgaggtgtgaccat-gtgactggcattcac-caagaaa--tacaaatagaagtggcatgaaatactttggggcagaaattttaagtgtcagtatgcagtttgcAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213468 264 - 13858734 ctaagcaaagctttcaactatc-cacagcacctaa-acagagaagtcaagacacaaccacgcacta-caaaaagccaat--atcgttga-ccatcatgaaatcattgttatatgagtacca-aatatggaaagactctagggcatgcTTTCTactttcttgctcctttagatgagatgtgaccat-gtgactggcattcac-caagaaa--tacaaatagaagtggcatgaaatacttt-gggcagaaattttaagtgtcagtaggcagtttgcAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4395939 265 + 32716333 CTAAGCAAAGCTTTCAACTCTC-CACAGTACCTAA-AGAGAGAAGTCAAGACACAACCACGCACTA-CCAAAAGCCAAT--ATCGTTGA-CCATCATGAAATCATTGTTATATGAGTACCA-AATATGGAAAGATTCTAGGGCATGCTTTCTGCTTTCTTGCACCTTTAGATGAGGTATGACCGT-GTGGCTGGCATTCAC-CAAGAAA--TACAAATAGAAGTGGCATGAAATACTTTGGGGCAGAAATTTTAAGTGTCAGTAGGCAGTTTGCAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155350949 263 - 185818997 ctaaacaaagctttcaactgtc-catagtacccaa-agagagaagtcaagacacaa-cacgcacta-caaaaagcCCAC--ATCACTGA-CCATCAGGAAATCATTGTTATCTGAGTACCA-AATAAGGAAAGACTCTAAGGCATGCTTTCTACTTTCTTGCTCCTTTAGATGAGGTGTGACCGT-GTGACTGGCATTCAC-CAAGAA---TACAAATAGAAGTGGCATGAGATACTTTGGGGTGGAAATTTTAAGTGTGAGTAGGCAGTTTGCAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173652 263 - 192294377 ctaaacaaagctttcaactgtc-catagtacccaa-agagagaagtcaagacacaa-cacgcacta-caaaaagcCCAC--ATCACTGA-CCATCAGGAAATCATTGTTATCTGAGTACCA-AATAAGGAAAGACTCTAAGGCATGCTTTCTACTTTCTTGCTCCTTTAGATGAGGTGTGACCGT-GTGACTGGCATTCAC-CAAGAA---TACAAATAGAAGTGGCATGAGATACTTTGGGGTGGAAATTTTAAGTGTGAGTAGGCAGTTTGCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651665 263 + 9440265 ctaaacaaagctttcaactgtc-catagtacccaa-agagagaagtcaagacacaa-cacgcacta-caaaaagcCCAC--ATCACTGA-CCATCAGGAAATCATTGTTATCTGAGTACCA-AATAAGGAAAGACTCTAAGGCATGCTTTCTACTTTCTTGCTCCTTTAGATGAGGTGTGACCGT-GTGACTGGCATTCAC-CAAGAA---TACAAATAGAAGTGGCATGAGATACTTTGGGGTGGAAATTTTAAGTGTGAGTAGGCAGTTTGCAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382714 263 + 21915920 ctaaacaaagctttcaactgtc-catagtacccaa-agagagaagtcaagacacaa-cacgcacta-caaaaagcCCAC--ATCACTGA-CCATCAGGAAATCATTGTTATCTGAGTACCA-AATAAGGAAAGACTCTAAGGCATGCTTTCTACTTTCTTGCTCCTTTAGATGAGGTGTGACTGT-GTGACTGGCATTCAC-CAAGAA---TACAAATAGAAGTGGCATGAAATACTTTGGGGTGGAAATTTTAAGTGTGAGTAGGCAGTTTGCAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959104 263 - 90373283 ctaaacaaagctttcaactgtc-cacagtacccaa-agagagaagtcaagacacaa-cacgcacta-caaaaagcCCAC--ATCACTGA-CCATTAGGAAATCATTGTTATCTGAGTACCA-AATAAGGAAAGACTCTAAGGCATGCTTTCTactttcttgctcctttagatgaggtgtgaccat-gtgactggcattcac-caagaa---tacaaatagaagtggcacgaaatactttggggtggaaattttaagtgtgagtaggcagtttgcAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126467 263 + 4234846 ctaaacacagctttcaaatgtc-catagtacccaa-agagagaagtcaagacacaa-cacgcacta-caaaaagcCCAC--ATCACTGA-CCATCAGGAAATCATTGTTATCTGAGTACCA-AATAAGGAAAGACTCTAAGGCATGCTTTCTACTTTCTTGCTCCTTTAGATGAGGTGTGACCGT-GTGACTGGCATTCAC-CAAGAA---TACAAATAGAAGTGGCATGAAATATTTTGGGGTGGAAATTTTAAGTGTGAGTAGGCAGTTTGCAT i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21886015 258 + 50472720 ctaagcaaagcttccaactgTC-CACAGTATCCAA-AGACAGAAACCAAGACATAA-CA--CACAG-CATAAAGCCAAT--AGAGTGGA-CCATCATGAA---ATTATTATATGAGTAGCA-AATATGGAAAAATTCTAAGGCATGCTTTCTACTGACTCGCTCCTTTATATGAGGTATGACCAT-GTGACTGGCACTTAT-CAAGAAA--CACAAATAGAA-GGGTATGAAATACTTTGGGACAGAAATTTTAACTGTCACAGGGCAGTGTGCAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4996853 264 + 13128814 ctaagaaaagcttccaactgTC-CACAGTATCCAA-AGAGAGAAACCAAGACACAA-CACGCACAG-CAAAAAGCCAAT--AGAGTGGA-CCATTGTGAAATCATTATTATATAAGTACCA-AATATGGAAAGATTCTAAGGCATGCTTTCTactgtcttgctcctttacatgaggtatgaccat-gtgactggcactcac-caagaaa--tacaaatagaaggggtatgaaatactttgggacagaaattttaactgtcactgggcagtttgcAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571380 255 - 14377064 ctaagcaaatcttccaactgtc-cacagtatccaa-agagaaaaaccaagacacaa-catgcacag-caaaaagcCAAT--AGAGTGGA-CCATTGTGAA---AT-----CATGAGTACCA-AATATGGAAAGATTCTAAggcatgctttc-actgtcttgctcctttatatgaggtataaccat-gtgactggcactcac-caagaaa--tacaaatagaaggggtatgaaatactttgggacagaaattttaactgtcactgggcagtttgcAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694728 264 + 9889416 ctaagcaaagcttccaactgtc-cacagtatccaa-agagagaaaccaagacctaa-cacgcacag-caaaaagccaat--agagtgga-ccatcatgaaatcattattaaatgagtacca-aatatggaaagattctaaggcacgcTTTCTactgtcttgctcctttatatgaggtatgaccat-gtgactggcactcac-caagaaa--tacaaatagaaggggtatgaaatactttgggacagaaattttaactgtcactgggcagtttgcAT i aotNan1.NW_018487195v1 I 2 C 0 e dasNov3.JH568778 3328078 0 + 6883506 I e micMur3.chr31 19157804 1394 + 47401472 I e otoGar3.GL873528 18056637 0 + 38779656 I e canFam3.chr31 26112337 57565 - 39895921 T e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=1708919.000000 s hg38.chr21_KI270874v1_alt 23373 171 + 166743 AAGAGAATGAATTCACTTT-GATAATGCATA---AAA---ATAGCAAGAATTCTAGCAACCCGAGAGGAAAAGTCAATGATCTCT-AACTATT-----GAGTGATAAAAGCTGT------ACTTGATGCAAGCCTATTAATAGAGGGTGAGAATTAGAAGACAGGTACACAAAT-ATGACATCGAACTACA s panTro5.chr21 3646194 173 + 33445071 AAGAAAATAAATTCACTTTTGATAATGCAGT---AAA---ACAGCAAGAATTCATGCAACCCGAGAGGAAAAGTCAATGATCTCTCAACTATT-----GAGTGATAAG-GCTGT------ACTTGGTGCAAGCCTATTAATAGAGGGTGAGAATTAGAAGACAGGTACACAAATTATGACATCGAACTACA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274702 171 + 46275980 AAGAGAATAAATTCACTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCCGAGAGGAAAAGTCAATGATCTCT-AACTATT-----GAATGATAAAGGCTGT------ACTTGGTGCAAGCCTATTAATAGAGGGTGAGAATTAGAAGACAGGTACACAAAT-ATGACATCGAACTACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213732 171 - 13858734 AAGAGAATAAATTCACTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGCCAATCATCTCC-AACTATT-----GAGTGATAAAGGCTGT------ACTTGGAGCAAGCCTATTAATAGAGGGTGAGAATTAGAAGACAGGTACACAAAT-ATGACATCGAACTACA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396204 171 + 32716333 AAAAGAATAAATTCACTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCT-AACTATT-----GAGTGATAAAGGCTGT------ACTTGGAGCAAGCCTATTAATAGAGGGTGAGAATTAGAAGACAGGTGCACAAAT-ATGACACCGAACTACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351212 171 - 185818997 AAGAGAATAAATTCAGTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCT-AACTATT-----GAGTGATAAAGGCTGT------ACTTTGAGTAAGACTATTAATAGCGGGTGAGAAGTAGAAGCCAGGTACACAAAC-ATGACATCAAACTACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162173915 171 - 192294377 AAGAGAATAAATTCAGTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCT-AACTATT-----GAGTGATAAAGGCTGT------ACTTTGAGTAAGACTATTAATAGCGGGTGAGAAGTAGAAGCCAGGTACACAAAC-ATGACATCAAACTACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8651928 171 + 9440265 AAGAGAATAAATTCAGTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCT-AACTATT-----GAGTGATAAAGGCTGT------ACTTTGAGTAAGACTATTAATAGCGGGTGAGAAGTAGAAGCCAGGTACACAAAC-ATGACATCAAACTACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8382977 171 + 21915920 AAGAGAATAAATTCAGTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCT-AACTATT-----GAGTGATAAAGGCTGT------ACTTTGAGTAAGACTATTAATAGAGGGTGAGAAGTAGAAGCCAGGTACACAAAC-ATGACATCGAACTACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959367 171 - 90373283 AAGAGAATAAATTCAGTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCT-AACTACT-----GAGTGATAAAGGCTGT------ACTTTGAGTAAGACTATTAATAGAGGGTGAGAAGTAGAAGCCAGGTACACAAAC-ATGACATCGAACTACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126730 171 + 4234846 AAGAGAATAAATTCAGTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTGAGAGGAAAAGTCAATCATCTCT-AACTATT-----GAGTGATAAAGGCTGT------ACTTTGAGTAAGACTATTAATAGAGGGTGAGAAGTAGAAGCCAGGTACACAAAC-ATGACATCGAACTACA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21886273 169 + 50472720 AAGAGAATAAAT--ACTTT-GATAATGCATA---AAA---ACAGCAAGAATTCTAGCAACCTAAGAGAAAAAGTCAATCATCTCT-AACTATT-----GAGTGATAAAGTCTGT------AATTTGAGCAAGCCTACTAACAGAGGGTGAGAATTAGAAGCCAAGTACACAAAT-AAGACATTGAACTTTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4997117 168 + 13128814 AAGAGAATAAAT--ACTTT-GATAATACAT----AAA---ACAGCAAGAATTCTAGCAACCTAAGAGAAAAAGTCAATCATCACT-AACTATT-----GAGTGATAAAGGCTGT------CATTTGAGCAAGCCTACTAATAGAGGGTGAGAATTAGAAGCCAAGTACACAAAT-AAGACATTGAACTATG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571635 168 - 14377064 AAGAGAATAAAT--ACTTT-GATAATGCAT----AAA---ACAGCAAGAATTCTAGCAACCTAAGAGAAAAAGTCAATCATCTCT-AACTATT-----GAGTGATAAAGGCTGT------AATTTGAGCAAGCCTACTAATAGAGGGTGAGAATTAGAAGCCAAGTACACAAAT-AAGACATTGAACTATG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8694992 168 + 9889416 AAGAGAATAAAT--ACTTT-GATAATGCAT----AAA---ACAGCAAGAATTCTAGCAACCTAAGAGAAAAAGTCAATGATCTCT-AACTATT-----GAGTGATAAAGACTGT------AATTTGAGCAAGCCTACTAATAGAGGGTGAGAATTAGAAGCCAAGTACACAAAT-AAGATGTTGAACTATG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20723973 169 - 38779656 AAGGCAAGAAATTCACTTT-TATAATAAA-A---CAG---GCAGCAAGAATTCTGGCAACAC-AGAGGAGAAGGCCATCATCTCT-AACAACT-----GAGCAATAAGGGCTGC------ACTTTGGGCAAGTCTTTCTGTAGAAGATGAGAATTAGGAGTGAGTTACGGAGAT-GCAACATCACAGGGCA i otoGar3.GL873528 I 1108 C 0 s canFam3.chr31 13784791 178 + 39895921 AAGAGAGGAAATTCACTTT-GAAAATATATATACTAA---GAAATGAGAATTCTAGCAATATTAGAGAAGAAAGCACTCATCTCT-AACAATTCACAAAAGTGATAAAAGGTGC------ACTCTGAGTACATCCATT-GTAGAGGCTGAAAATTAGAGCCCAGGTAAAAAATT-GTGACATCACAGTATA i canFam3.chr31 I 1324 C 0 s dasNov3.JH568778 3557731 180 - 6883506 AAGTGAAGAAATTCACTTT-GATAATACGTA---AAATATGTAGCATGAATTCTGTAAATATTAGGGGAGAAAGCAATCACCTCA-AACAATT-----TAGCGATTAAAAATATACTTAAACTTTGAGACAGTTTATTAGCAGAGGCTGAGAATTAGAATCCAGGTATAAAAAT-GTGACAGTGCAGTATA i dasNov3.JH568778 I 2863 C 0 e micMur3.chr31 19157804 1394 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=1002843.000000 s hg38.chr21_KI270874v1_alt 23544 87 + 166743 GAAGGCAGTGGG-ACAAGAA--CACTATAGAATGAAAAAGTGAATCAG--GAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA s panTro5.chr21 3646367 89 + 33445071 GAAGGCAGTGGGGACAAGAAAACACTATAGAATGAAAAAGTGAATCAG--GAGAACAAAGG-AACAGGTATTCAACACAAAAC-AGATTCAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274873 87 + 46275980 GAAGGCAGTGGG-ACAAGAA--CACTATAGAATGAAAAAGTGAATCAG--GAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213903 87 - 13858734 GAAGGCAGTGGG-ACAAGAA--CACTATAGAATGAAAAAGTGAATCAG--GAGAACAAAGGGAACAGGTATTCAA-ACAAAATCAGATTCAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396375 87 + 32716333 GAAGGCAGTGGG-ACAAGAA--CACTTTAGAATGAAAAAGTGAATCAG--GAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351383 89 - 185818997 GAAGGCAGTGGG-ACAAGAA--TACTTCACAATGAAAAGGTGAATCAGGAGAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174086 89 - 192294377 GAAGGCAGTGGG-ACAAGAA--TACTTCACAATGAAAAGGTGAATCAGGAGAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652099 89 + 9440265 GAAGGCAGTGGG-ACAAGAA--TACTTCACAATGAAAAGGTGAATCAGGAGAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383148 89 + 21915920 GAAGGCAGTGGG-ACAAGAA--CACTTCACAATGAAAAGGTGAATCAGGAGAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959538 89 - 90373283 GAAGGCAGTGGG-ACAAGAA--CACTTCACAATGAAAAGGTGAATCAGAAGAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126901 89 + 4234846 GAAGGCAGTGGG-ACAAGAA--TACTTCACAATGAAAAGGTGAATCAGGAGAGAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21886442 87 + 50472720 AAAGGCAGTGGG-ACAAGAA--CACTTTAGAATGAAAAAGTGAATCAG--GAAAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4997285 87 + 13128814 AAAGGCAGTAGG-ACAAGAA--CACTTTAGAATGAAAAAGTGAATCAG--GAAAGCAAAGGGAGCAGGTATTCAA-ACAAAACCAGATTCAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571803 84 - 14377064 AAAGGCAGTGGG-AC---AA--CACTTTAGAATGAAAAAGTGAATCAG--GAAAGCAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8695160 87 + 9889416 AAAGGCAGTGGG-ACAAGAA--CACTTTAGAATGAAAAAGTGAATCAG--GAAAACAAAGGGAACAGGTATTCAA-ACAAAACCAGATTCAAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19159198 87 + 47401472 GAAAGCAGTGGA-ACAAGAA--CACTTCTGGATGCAAAAGTGCATCAA--GAGGACAAAAGAAACAGGTATTCAA-ACAAGACCAGAATCAAA i micMur3.chr31 I 1394 I 327 s otoGar3.GL873528 20724142 86 - 38779656 GACGGCA-TGAA-ACAAGAA--CACTTCAGGGTGCAAAAGTGAATCAG--GAGAACAAAAGGAAGAGGCATTCCA-AAAAGACCAGAGTTAAA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13784969 77 + 39895921 GCAGGGAGTAGA-AAAAAAA--CAGTTTAGAAGCTAAA-----ATCAA--GAGAACAAAA-----ATGTATTTAA-ACAAGACCAGAATCAAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3557911 86 - 6883506 GAAGGGCGTGTG-TCAAGAA--CACTCGAGAATACATAAGTATATCAA--TAGAACAAAAAGAACAAG-ATTCAA-ACAAGACCAAAATCAAA i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=1202064.000000 s hg38.chr21_KI270874v1_alt 23631 147 + 166743 GTTTGAGAAAA----TTGTGTCTCTTT-ATAAGATGAAATACAAATTTTATTAGAGC-TCCA--AGAT-TATTAATTATACTTGTTTACAATTAGGCTTCA-----TCACATAATGTAGGATTTCC-TTTTT---------------------AAAAAttatttgtagaaatttatagggtac s panTro5.chr21 3646456 146 + 33445071 GTTTGAGAAAA----TTGTGTCTCTTTGATAAGATGAA-TACAAATTTTATTAGAGCCTCAA--AGAT-TATTAATTATACTTGTTTACA-TTAGGCTTCAC----TCACATAATGTAGGATTTCT-TTTTA---------------------AAAtatt-tttgtagaaatttatagg-tac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17274960 147 + 46275980 GTTTGAGAAAA----TTGTGTCTCTTT-ATAAGATGAAATACAAATTTTATTAGAGC-TCCA--AGAT-TATTAATTATACTTGTTTACAATTAGGCTTCA-----TCACATAATGTAGGATTTCC-TTTTT---------------------AAAAAttgtttgtagaaatttatagggtac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3213990 151 - 13858734 GTTTCAGAAAA----TTGTGTCTCTTT-ATAAGATGAAATACAAATTTTATTAGAAC-TCCA--AGAT-TATTAATTATACTTGTTTACAATTAGGCTTCATTTCATCACATAATGTAGGATTTCC-TTTTT---------------------AAA-Attatttgtagaaatttatagggtac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396462 152 + 32716333 GTTTGAGAAAA----TTGTGTCTCTTT-ATAACATGAAATAAAAATTTTATTAGAAC-TCCA--AGAT-TATTAATTATACTTGTTTACAATTAGGCTTTATTTCATCACATAATGCAGGATTTCC-TTTTT---------------------AAAAAttatttgtagaaatttctggggtac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351472 159 - 185818997 ATTTGAGAAAATACTTTGTGTCCCTCT-ACACGATAAAATAAAAATTTTATTAGAAC-TTTATTAGCT-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAATGTAGGATTTCC-TTTTTA--------------------AAAAAttatttgtataaatcaatggggtac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174175 158 - 192294377 ATTTGAGAAAATAGTTTGTGTCCCTCT-ACACGATAAAATAAAAATTTTATTAGAAC-TTTATTAGCT-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAATGTAGGATTTCC-TTTTT---------------------AAAAAttatttgtataaatcaatggggtac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652188 158 + 9440265 ATTTGAGAAAATAGTTTGTGTCCCTCT-ACACGATAAAATAAAAATTTTATTAGAAC-TTTATTAGCT-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCAACACATAATGTAGGATTTCC-TTTTT---------------------AAAAAttatttgtataaatcaatggggtac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383237 158 + 21915920 ATTTGAGAAAATAGTTTGTGTCTCTCT-ACACGATAAAATAAAAATTTTATTAGAAC-TTTATTAGCT-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAATGTAGGATTTCC-TTTTT---------------------AAAAAttatttgtataaatcaatggggtac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959627 158 - 90373283 ATTTGAGAAAATAGTTTGTGTCTCTTT-ACACGATAAAATAAAAATTTTATTAGAAC-TTTATTAGCG-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAATGTAGGATTTCC-TTTTT---------------------TAAAAttatttgtataaatcaatggggtac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2126990 158 + 4234846 ATTTGAGAAAATCGTTTGTGTCTCTCT-ACACGATAAAATAAAAATTTTATTAGAAC-TTTATTAGCT-TATTAATTATACTTGCCTACAATTAGGCTTCATTTCATCACATAATGTAGGATTTCC-TTTTT---------------------AAAAAttatttgtataaatcaatggggtac i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21886529 152 + 50472720 CTCTGAGAAAATAATTTG----TGTTT-ATGAGATGAAATAAAAATTTTATTAGAGC-TCCA--AGAT-TATTAATTTTACTTGTTTACATTTAGGCATCATTTTATCACATAATGTAGGAtttcc-ttttt---------------------taaaagtatttatataaatttatggggtcc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4997372 150 + 13128814 CTCTGAGAAAATAGTT------TCTTT-ATGAGATGAAATAAAAATTTTATTAGAAC-TCCA--AGAT-TACCAATGCTACTTGTTTACAATTAGGCATCATTTTATCACATAATGTAGGATTTCCATTTTT---------------------TAAAATTAttt-tataaatttatggggtcc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9571887 157 - 14377064 CTCTGAGAAAATAGTTTGTGTTTCTTC-ATGAGATGAAATAAAAATTTTATTAGAAC-TCCA--AGAT-AGTTAATTTTACTTGTTTATAATTAAGCATCATTTTATCACATAATATAGGATTTCCTTTTTT---------------------TAAAAttatttatataaatttatggggtcc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8695247 156 + 9889416 CTCTGAGAAAATAGTTTGTGTTTCTTT-ATGAGATGAAATAAAAATTTTATTAGAAC-TCCA--AGAT-TATTAATTTTACTTGTTTACAATTAGGCATCATTTTATCACATAATGTAGGATTTCC-TTTTT---------------------TAAAAttatttatataaatttatggggtcc i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20724228 135 - 38779656 -TTGGAGAAAACTGTTTTCTTGCCTCT----TAGTAAGTGAGAAACTTCATCAGAAT-CCCA--AGACATGTTAAGTATAGTTGTTTATAATTAAACTGCGTTCCATCACCTAATGCAGAATTTCT-TTTGC---------------------------CATCTTTAAAAA------------ i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785046 139 + 39895921 -TTTTAGAAAATGGTTTTTATGTCTCT--TAAAATAAATTAGAAGTTTTATCAGAAC-CCTA--AGATATACTAATTATA---GTTCACCATTAGGCTTCATTCTATCACATAATACAGAACTTCT-TTTGC---------------------------CATCCTGAAAAA-------GTCAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3557997 176 - 6883506 -TTTTAGAAAATTA-TCACATCTGTTA-GTGAAATAAACTAGAAATTGTGTCAGAAC-TCTA--AGATACAGCAATTATACTTATTTACATTTAGACTTCAGCCCAACAAATAATGTAGGTTTCCT-TCATTACCTTTAAAAAGTCACAAACTAAAGAGTTTTTGTAAATACTACCAGATAAC i dasNov3.JH568778 C 0 I 477 e micMur3.chr31 19159285 327 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=749576.000000 s hg38.chr21_KI270874v1_alt 23778 96 + 166743 aagtgcaattttcttacatgggtagattatgtagtggtgaagttagagcttttactgta-tccatcacccaaatagtgtacattgtatccattaagt s panTro5.chr21 3646602 97 + 33445071 aattgcaattttcttacatgggtagatcatgtagtggtgaagttagagcttttactgtaatccatcacccaaatagtgtacattgtatccattaagt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275107 96 + 46275980 aagtgcaattttcttacatgggtagatcatgtagtggtgaagttagagcttttactgta-tccatcacccaaatagtgtacattgtatccattaagt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214141 96 - 13858734 aagtgcaattttcttacatgggtagattatatagtggtgaagttagagcttttactgta-tccatcacccaaatagtgtacattgtatccattaagt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396614 96 + 32716333 aagtgcaattttcttacatgagtagattgtgtagtggtgaagttagagcttttagtgta-tgcatcacccaaataatatacattgtatccattaagt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351631 96 - 185818997 aagtgcaattttcttacatgtgtagattgtgtagtggtgaagttagagcttttagtgta-tccatcacccaaataatgtacattgtatccattaagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174333 96 - 192294377 aagtgcaattttcttacatgtgtagattgtgtagtggtgaagttagagcttttagtgta-tccatcacccaaataatgtacattgtatccattaagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652346 96 + 9440265 aagtgcaattttcttacatgtgtagattgtgtagtggtgaagttagagcttttagtgta-tccatcacccaaataatgtacattgtatccattaagc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383395 96 + 21915920 aagtgcaattttcttacatgtgtagattgtgtagtggtgaagttagagcttttagtgta-tccatcacccaaataatgtacattgtatccattaagc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959785 96 - 90373283 aagtgcaattttcttacatgtgtagattgtgtagtgatgaagttagagcttttagtgta-tccgtcacccaaataatgtacattgtatccattaagt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127148 96 + 4234846 aagtgcaattttcttacatgtgtagattgtgtagtggtgaagttagagcttttagtgta-tccatcacccaaataatgtacattgcatccattaagc i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21886681 95 + 50472720 aagtgcaattttcttatctgtgtagattgtgtagtggtgaa-ttaaagattttagtata-tccatcacccaaataaagtacgttgtatccatgaagt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4997522 96 + 13128814 aagtgcaattttcttatctgtgtagattgtgtagtggtgaagttaaagattttagtgta-tccatcacccaaataaagtacgttgtatccacgaagt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572044 96 - 14377064 aagtgcaattttcttatctgtgtagattgtgtggtggtgaagttaaagattttagtgta-tccatcacccaaataaagtacgttgtatccatgaagt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8695403 96 + 9889416 aagtgcaattttcttatctgtatatattgtgtagtggtgaagtcaaagattttagtgta-tccatcacccaaataaagtatgttgtgtccatgaagt i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20724363 27 - 38779656 ----------------------------------------------------------A-TC----------ATAA-ATACATTGTAACTGTTAAGT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785185 27 + 39895921 AAAT--------------TAAGGAGACCTTGTAGT--TTAAGT------------------------------------------------------ i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=572563.000000 s hg38.chr21_KI270874v1_alt 23874 73 + 166743 aat-ctctcatcatccaccctcctttcatcccttcgcctttccaagtatccattgtctatcatccATCACA-TCA s panTro5.chr21 3646699 74 + 33445071 atcactctcatcatccacctcctttttatccctgcgcctttccaagtatc-attgtctatcatccATCACAATCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275203 73 + 46275980 aat-ctctcatcatccaccctcctttcatcccctcgcctttccaagtatccattgtctatcatccATCACA-TCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214237 73 - 13858734 aat-ctctcatcatccaccctcctttcatcccctcacctttccaagtatccattgtctatcatccATCACA-TCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396710 73 + 32716333 aat-ctctcatcatccaccctcctttcatcccctcacctttccaagtatccattgtctatcatccATCACA-TCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351727 73 - 185818997 aat-ttctcatcaaccaccctcatttcatcccctcacccttccaagtatccattgtctatcatccATCACA-TCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174429 73 - 192294377 aat-ttctcatcaaccaccctcatttcatcccctcacccttccaagtatccattgtctatcatccATCACA-TCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652442 73 + 9440265 aat-ttctcatcatccaccctcatttcatcccctcacccttccaagtatccattgtctatcatccATCACA-TCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383491 73 + 21915920 aat-ttctcatcatccaccctcatttcatcccctcacccttccaagtatccattgtctatcatccATCTCA-TCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959881 73 - 90373283 aat-ttctcatcatccaccctcatttcatcccctcacccttccaagtatccattgtctatcatccATCACA-TCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127244 73 + 4234846 aat-ttctcatcatccaccctcatttcatcccctcaccctttcaagtatccattgtctatcatccATCACA-TCA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21886776 73 + 50472720 aat-ttctcatcatccaccctccttttatccccttaaccttccaagtctccattatctatcatccatccca-tcA i calJac3.chr21 C 0 I 319 s saiBol1.JH378168 4997618 73 + 13128814 aat-ttctcatcatccatcctccttttatcccctcacccttccaagtctccactgtctatcatccATCCCA-TCA i saiBol1.JH378168 C 0 I 313 s cebCap1.NW_016107322v1 9572140 73 - 14377064 aat-ttctcatcatccaccctccttttatcccctcacccttccaagtctccattgtctgtcatccATCCCA-TCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8695499 73 + 9889416 aat-ttcccatcatccaccctccttttatcccttcacccttccaagtctccattgtctatcatccATCCCA-TCA i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13785212 1 + 39895921 --------------------------------------------------------------------------A i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e otoGar3.GL873528 20724390 0 - 38779656 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=148539.000000 s hg38.chr21_KI270874v1_alt 23947 17 + 166743 CACAATGTAGGATTTCT s panTro5.chr21 3646773 17 + 33445071 CACAATGTAGGATTTTT i panTro5.chr21 C 0 I 1 s panPan2.chr21 17275276 17 + 46275980 CACAATGCAGGATTTCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214310 17 - 13858734 CACAATGTAGGATTTCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396783 17 + 32716333 CATAATGTTGGATTTCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351800 17 - 185818997 CATAATGCAGGATTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174502 17 - 192294377 CATAATGCAGGATTTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652515 17 + 9440265 CATAATGCAGGATTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383564 17 + 21915920 CATAATGCAGGATTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959954 17 - 90373283 CATAATGCAGAATTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127317 17 + 4234846 CATAATGCAGGATTTCT i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887168 17 + 50472720 cATAATGTAGGATTTCT i calJac3.chr21 I 319 C 0 s saiBol1.JH378168 4998004 17 + 13128814 cATAATGTAGGATTTCT i saiBol1.JH378168 I 313 C 0 s cebCap1.NW_016107322v1 9572213 17 - 14377064 CATAATGTAGGAtttct i cebCap1.NW_016107322v1 C 0 I 320 s aotNan1.NW_018487195v1 8695572 17 + 9889416 CATAATGTAGGAtttct i aotNan1.NW_018487195v1 C 0 I 325 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e otoGar3.GL873528 20724390 0 - 38779656 C e canFam3.chr31 13785213 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=2760.000000 s hg38.chr21_KI270874v1_alt 23964 1 + 166743 C s panTro5.chr21 3646791 1 + 33445071 C i panTro5.chr21 I 1 C 0 s panPan2.chr21 17275293 1 + 46275980 C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214327 1 - 13858734 C i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396800 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351817 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174519 1 - 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652532 1 + 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383581 1 + 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959971 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127334 1 + 4234846 T i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887185 1 + 50472720 T i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998021 1 + 13128814 T i saiBol1.JH378168 C 0 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e otoGar3.GL873528 20724390 0 - 38779656 C e aotNan1.NW_018487195v1 8695589 325 + 9889416 I e cebCap1.NW_016107322v1 9572230 320 - 14377064 I e canFam3.chr31 13785213 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=65134.000000 s hg38.chr21_KI270874v1_alt 23965 9 + 166743 TTGCTACCG s panTro5.chr21 3646792 9 + 33445071 TTGCTACCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275294 9 + 46275980 TTGCTACCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214328 9 - 13858734 TTGCTACCG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396801 9 + 32716333 TTGCTACCG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351818 9 - 185818997 TTGCCACCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174520 9 - 192294377 TTGCCACCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652533 9 + 9440265 TTGCCACCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383582 9 + 21915920 TTGCCACCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959972 9 - 90373283 TTGCCACCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127335 9 + 4234846 TTGCCACCA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887186 9 + 50472720 TTGCCACCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998022 9 + 13128814 TTGCCACCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572550 9 - 14377064 TTGCCACCA i cebCap1.NW_016107322v1 I 320 C 0 s canFam3.chr31 13785213 6 + 39895921 ---CTATCG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e otoGar3.GL873528 20724390 0 - 38779656 C e aotNan1.NW_018487195v1 8695589 325 + 9889416 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=270004.000000 s hg38.chr21_KI270874v1_alt 23974 31 + 166743 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA s panTro5.chr21 3646801 31 + 33445071 TTAA-GTTCA-TCCAAGGCAACAGACCCTGACA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275303 31 + 46275980 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214337 31 - 13858734 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396810 31 + 32716333 TTAAAGTCCACTCCAGAGCAA--GACCCTGACG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351827 31 - 185818997 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174529 31 - 192294377 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652542 31 + 9440265 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383591 31 + 21915920 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14959981 31 - 90373283 TTAAAGTCCACTCCAGAGCAA--GACTCTGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127344 31 + 4234846 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887195 31 + 50472720 TTAAAGTCCACTCCAGAGCAA--GACCCTGACg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998031 31 + 13128814 TTAAAGTCCATTCCAGAGCAA--GACCCTGACG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572559 31 - 14377064 TTAAAGTCCACTCCAGAGCAA--GACCCTGACA i cebCap1.NW_016107322v1 C 0 I 74 s aotNan1.NW_018487195v1 8695914 31 + 9889416 TTAAAGTCCACTCCAGAGCAA--GACCCGGACA i aotNan1.NW_018487195v1 I 325 I 168 s canFam3.chr31 13785219 22 + 39895921 ---ATAACCATCCTTGAACAG--GATC------ i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e otoGar3.GL873528 20724390 0 - 38779656 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=74578.000000 s hg38.chr21_KI270874v1_alt 24005 40 + 166743 C------------------Taaaaaaa---------------------------aaaa--aagtcagaaaagaaataa---aaaagaaaa s panTro5.chr21 3646832 41 + 33445071 C------------------TAAaaaaa---------------------------aaaa----gtcagaaaagaaataatagaaaagaaaa i panTro5.chr21 C 0 I 1 s panPan2.chr21 17275334 41 + 46275980 C------------------Taaaaaaa---------------------------aaaa-aaagtcagaaaagaaataa---aaaaGAGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214368 41 - 13858734 C------------------Taaaaaaa---------------------------aaaa-aaagtcagaaaagaaataa---aaaagaaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396841 40 + 32716333 C------------------Taaaaaaa---------------------------aaga--aattcagaaaagaaataa---aaaagaaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351858 54 - 185818997 Caaaaaaaaaaaaaaaaa-gaaaagaa---------------------------aaaaaaaagtcagaaaagaaatta---aaaa----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174560 54 - 192294377 Caaaaaaaaaaaaaaaaa-gaaaagaa---------------------------aaaaaaaagtcagaaaagaaatta---aaaa----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652573 51 + 9440265 C---aaaaaaaaaaaaaa-gaaaagaa---------------------------aaaaaaaagtcagaaaagaaaTTG---AAAA----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383622 45 + 21915920 C---------aaaaaaaa-aaaaagaa---------------------------aaaaaaaagtcagaaaagaaatta---aaaa----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960012 55 - 90373283 CACAAaaaaaagaaaaaggaaaaaaga---------------------------gaaaaaaagtcagaaaagaaattt---aaaa----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127375 46 + 4234846 CACaaaaaaa---------aaaaagaa---------------------------aaaaaaaagtcagaaaagaaatta---aaaa----- i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887226 47 + 50472720 -----------agagaga-gagagaga---------------------------gagagagagagagag-agagagag---agagagaga i calJac3.chr21 C 0 I 30 s saiBol1.JH378168 4998062 75 + 13128814 -----------AGAGAGA-GAGAGAGAgtgtgtgtgtgtgtgtgtgtgtgtgtTGGGGgggagggagggaagaaggga---agaaggaaa i saiBol1.JH378168 C 0 I 44 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e otoGar3.GL873528 20724390 0 - 38779656 C e aotNan1.NW_018487195v1 8695945 168 + 9889416 I e cebCap1.NW_016107322v1 9572590 74 - 14377064 I e canFam3.chr31 13785241 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=41340.000000 s hg38.chr21_KI270874v1_alt 24045 5 + 166743 GTTAC s panTro5.chr21 3646874 5 + 33445071 GTTAC i panTro5.chr21 I 1 I 146 s panPan2.chr21 17275375 5 + 46275980 GTTAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214409 5 - 13858734 GTTAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396881 5 + 32716333 gTTAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351912 5 - 185818997 GTTAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174614 5 - 192294377 GTTAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652624 5 + 9440265 GTTAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383667 5 + 21915920 GTTAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960067 5 - 90373283 attac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127421 5 + 4234846 GTTAC i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887303 5 + 50472720 GTTAC i calJac3.chr21 I 30 C 0 s saiBol1.JH378168 4998181 5 + 13128814 GTTAC i saiBol1.JH378168 I 44 C 0 s cebCap1.NW_016107322v1 9572664 5 - 14377064 gTTAC i cebCap1.NW_016107322v1 I 74 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e otoGar3.GL873528 20724390 0 - 38779656 C e aotNan1.NW_018487195v1 8695945 168 + 9889416 I e canFam3.chr31 13785241 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=184288.000000 s hg38.chr21_KI270874v1_alt 24050 29 + 166743 AAATATTTATCCACTTTCCAATGGCTGTT- s panTro5.chr21 29805421 29 - 33445071 AAATATTTATCCACTTTCCAACTGCTGTt- i panTro5.chr21 I 3463 C 0 s panPan2.chr21 17275380 29 + 46275980 AAATATTTATCCACTTTCCAACTGCTGTt- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214414 29 - 13858734 GAATATTTATCCACTTTCCAACTGCTGTt- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396886 29 + 32716333 GAATATTTATACACTTTCTAACTGTTGTT- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351917 29 - 185818997 AAATATTTATACACTTTCTAATTGTTATT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174619 29 - 192294377 AAATATTTATACACTTTCTAATTGTTATT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652629 29 + 9440265 AAATATTTATACACTTTCTAATTGTTATT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383672 29 + 21915920 AAATATTTATACACTTTCTAACTGTTATT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960072 29 - 90373283 aaatATTTATACACTTTCTAACTGTTATT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127426 29 + 4234846 AAATATTTACACACTTTCTAACTGTTATT- i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887308 25 + 50472720 AAATATTTATATACTTT----CTGTTATT- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998186 25 + 13128814 AAATATTTAGACACTTT----CTGTTATT- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572669 29 - 14377064 AAATATTTATACACTTTCTAACTGTTTTT- i cebCap1.NW_016107322v1 C 0 C 0 s canFam3.chr31 13785241 27 + 39895921 ---TATGTACCTACCTTCTAATGGTTAAAT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e otoGar3.GL873528 20724390 0 - 38779656 C e aotNan1.NW_018487195v1 8695945 168 + 9889416 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=33049.000000 s hg38.chr21_KI270874v1_alt 24079 5 + 166743 CAAAG s panTro5.chr21 29805450 5 - 33445071 caaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275409 5 + 46275980 caaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214443 5 - 13858734 caaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396915 4 + 32716333 C-AAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351946 5 - 185818997 CAAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174648 5 - 192294377 CAAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652658 5 + 9440265 CAAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383701 5 + 21915920 CAAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960101 5 - 90373283 CAAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127455 5 + 4234846 CAAAG i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887333 5 + 50472720 CCAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998211 5 + 13128814 CCAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572698 5 - 14377064 CCAAA i cebCap1.NW_016107322v1 C 0 C 0 s otoGar3.GL873528 20724390 5 - 38779656 CAAGG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785268 5 + 39895921 CAAGG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e aotNan1.NW_018487195v1 8695945 168 + 9889416 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=563688.000000 s hg38.chr21_KI270874v1_alt 24084 54 + 166743 TTATACTGCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAGGTATATGGTGTTG s panTro5.chr21 29805455 54 - 33445071 ttataccgcccagagtaagcaaacc--agaaaaacagcatcatgtatatggtgttg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275414 54 + 46275980 ttatactgcccagagtaagcaaacc--agaaaaacagcatcatgtatatggtgttg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214448 54 - 13858734 ttatactgcccagagtaagcaaacc--agaaaaacagcatcaggtatatggtgttg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396919 54 + 32716333 TTATACTGCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAGGTATACGGTGTTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155351951 54 - 185818997 TTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174653 54 - 192294377 TTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652663 54 + 9440265 TTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383706 54 + 21915920 TTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960106 54 - 90373283 TTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127460 54 + 4234846 TTATACTCCCCAGAGTAAGCAAACC--AGAAAAACAGCATCAAGTATATGGTGTTA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887338 54 + 50472720 TTATACTGCCCAGAGTAAGCAAAGC--AGAAAAACAGCATCAGGTATATGGTGTTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998216 54 + 13128814 TTATACTGCCCAGAGTAAGCAAAGC--AGAAGAACAGCATCAGGTATATGGTGGTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572703 54 - 14377064 TTATACTGCCCAGAGTAAGCAAAGC--AGAAGAACAGTATCAGGTATACAGTGTTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696113 54 + 9889416 TTATACTGCCCAGAATAAGCAAAGC--AGAAGAACAGCATCAGGTATATGGTGTTG i aotNan1.NW_018487195v1 I 168 C 0 s otoGar3.GL873528 20724395 52 - 38779656 TTATAGTGCCCGGAGTAAGCCAATG--AGAAAAACAGCACCAGACACAC--TGTTG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785273 51 + 39895921 TTATACTGCCCAGAGTAAGCAAACCATAAAAAAACAGCACCAGGTAAACAG----- i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3558173 477 - 6883506 I e micMur3.chr31 19159285 327 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=143440.000000 s hg38.chr21_KI270874v1_alt 24138 18 + 166743 CTCTGCCCAA----ATTTGTTT s panTro5.chr21 29805509 18 - 33445071 ctctgcccaa----atttgttt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275468 18 + 46275980 ctctgcccaa----atttgttt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214502 18 - 13858734 ctctgcccaa----atttgttt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4396973 18 + 32716333 CTCTGCCCAA----ATTTGTTT i nomLeu3.chr25 C 0 I 1015 s rheMac8.chr3 155352005 18 - 185818997 TTCTGCCCAA----TTTAGTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174707 18 - 192294377 TTCTGCCCAA----TTTAGTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652717 18 + 9440265 TTCTGCCCAA----TTTAGTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383760 18 + 21915920 TTCTGCCCAA----TTTAGTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960160 18 - 90373283 TTCTGCCCAA----TTTAGTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127514 18 + 4234846 TTCTGCCCAA----TTTAGTTT i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887392 18 + 50472720 CTGTGCCCAA----TTTTGTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998270 17 + 13128814 TTGTG-CCAA----TTTCGTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572757 18 - 14377064 CTGTGCCTAA----TTTTGATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696167 18 + 9889416 CTGTGCCCAA----TTTTGTTT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20724447 18 - 38779656 CTCTGCTAAG----TCATATTT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785324 18 + 39895921 CTCTATCTGG----TTTTATTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3558650 22 - 6883506 atctaCACAAAAATTCTTATTT i dasNov3.JH568778 I 477 C 0 e micMur3.chr31 19159285 327 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=379292.000000 s hg38.chr21_KI270874v1_alt 24156 39 + 166743 CTGTTGGTGTGGTGCACCTCATGAAATAGATGGCCTCTA s panTro5.chr21 29805527 39 - 33445071 ctgttggtgtggtgcacCTCATGAAATAGATGGCCTCTA i panTro5.chr21 C 0 n 0 s panPan2.chr21 17275486 39 + 46275980 ctgttggtgtggtgcacCTCATGAAATAGATGGCCTCTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214520 39 - 13858734 ctgttggtgtggtgcatgtCATGAAATAGACGGCCTCTA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155352023 39 - 185818997 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174725 39 - 192294377 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652735 39 + 9440265 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383778 39 + 21915920 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960178 39 - 90373283 CTGTTGGTGTGGTACATCTCATGAAATAGATGGCCTCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127532 39 + 4234846 CTGTTGTTGGGGTACATCTCATGAAATAGATGGCCTCTA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887410 39 + 50472720 CTGTCGGTGTGGTGCATCTCATAAAATAGATGGCCTCTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998287 39 + 13128814 CTGTTGGTGTGGTGCATCTCATAAAATAGATGGCCTCTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572775 39 - 14377064 CTGTTGGTGTGGTGCATCTCATAAAATAGATGGCCTCTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696185 39 + 9889416 CCGTTGGTGTGGTGCATCTCATAAAATAGATGGCCTCTA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20724465 36 - 38779656 ---CTGTTGTGATGCAGCTCATGAAACAGGTAACCGCTA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785342 39 + 39895921 CTGCCTATACAGTACATGTCATGAAATCAATGGCCTCTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3558672 37 - 6883506 CTGTC--TGTATTATGTCTATGAAACTAGATGGTCTCTA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19159285 327 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e nomLeu3.chr25 4396991 1015 + 32716333 I a score=233141.000000 s hg38.chr21_KI270874v1_alt 24195 34 + 166743 GAGCACTTGTCAGTTTTAG--------AA--CATGA--TGGATCTA s panTro5.chr21 3647025 38 + 33445071 GAGCACTTGTCAGTTTTAG--------AAACGATGACGTGGATCTA i panTro5.chr21 I 146 C 0 s panPan2.chr21 17275525 34 + 46275980 GAGCACTTGTCAGTTTTAG--------AA--CATGA--TGGATCTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214559 34 - 13858734 GAGCACTTGTCAGTTTTAG--------AA--CATGG--TGGATCTA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155352062 34 - 185818997 AAGTGCTTGTCAGTTTTAG--------AA--TATGA--CAAATCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174764 34 - 192294377 AAGTGCTTGTCAGTTTTAG--------AA--TATGA--CAAATCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652774 34 + 9440265 AAGTGCTTGTCAGTTTTAG--------AA--TATGA--CAAATCTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383817 34 + 21915920 AAGTGCTTGTCAGTTTTAG--------AA--TATGA--TGAATCTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960217 34 - 90373283 AAGTGCTTGTCAGTTTTAG--------AA--TATGA--TGAATCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127571 34 + 4234846 AAGTGCTTGTCAGTTTTAG--------AA--TATGA--TGAATCTA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887449 34 + 50472720 ACACACTTGTCAGTTTTAG--------AA--AATGA--AAAATCTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998326 34 + 13128814 ATGCATTTGTCAGTTTTAG--------AA--AATGA--TGAATCTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572814 34 - 14377064 ACGCACTTGTCAGTTTTAG--------AA--AATGA--TGAATCTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696224 34 + 9889416 ACGCACTTGTCAGTTTTAG--------AA--AATGA--TGAATCTA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20724501 34 - 38779656 AAGCCCTCGTCAATTTAAA--------AA--TATAA--TGAATCTA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785381 42 + 39895921 AAGCACTTGTCAAAGTGAGATGAATACAG--TGAGA--TGAATCAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3558709 8 - 6883506 -------------ATTTAG--------AG----------------- i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19159285 327 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e nomLeu3.chr25 4396991 1015 + 32716333 I a score=359828.000000 s hg38.chr21_KI270874v1_alt 24229 37 + 166743 GATTTCACTAAT----GAGGTATTCCAGAAGCTGAATATAT s panTro5.chr21 3647063 36 + 33445071 GATTTCACTAAT----GAGGTATTC-AGAAGTGAATTATAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275559 37 + 46275980 GATTTCACTAAT----GAGGTATTCCAGAAGCTGAATATAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214593 37 - 13858734 GATTTCACTAAT----GAAGTATTCCAGAAGCTGAATATAT i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155352096 37 - 185818997 GATTTCACTAAT----GAAGTATTCCAGAAGCTGAATATAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174798 37 - 192294377 GATTTCACTAAT----GAAGTATTCCAGAAGCTGAATATAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652808 37 + 9440265 GATTTCACTAAT----GAAGTATTCCAGAAGCTGAATATAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383851 37 + 21915920 GATTTCAATAAT----GAAGTATTCCAGAAGCTGAATATAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960251 37 - 90373283 GATTTCACTAAC----AAAGTATTCCAGAAGCTGAATATAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127605 37 + 4234846 GATTTCAATAAT----GAAGTATTCCAGAAGCTGAATATAC i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887483 37 + 50472720 GATTTCATTAAT----GAAGTATTCCAGCAGCTGAATATAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998360 37 + 13128814 GATTTCACTAAT----GAAGTATTCCAGCAGCTGAATATAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572848 37 - 14377064 GATTTCACTAAT----GAAGTATTCTAGCAGCTGAATATAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696258 37 + 9889416 GATGTCACTAAT----GAAGTATTCCAGCAGCTGAATATAG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19159612 37 + 47401472 GATTTCACTAAT----TAACTACTCCTGAAGCTGAGTATAT i micMur3.chr31 I 327 C 0 s otoGar3.GL873528 20724535 41 - 38779656 GATCTCACGAATAAACTAACTGTTCCTGCAGCTGAATATat i otoGar3.GL873528 C 0 I 170 s canFam3.chr31 13785423 36 + 39895921 GATCCCACT-AT----GAACTATTCCTGAAACAAGATATTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3558717 29 - 6883506 --------TAAT----AAAGTATTTCCACAGCTGAATATAT i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e nomLeu3.chr25 4396991 1015 + 32716333 I a score=548833.000000 s hg38.chr21_KI270874v1_alt 24266 50 + 166743 CAGGAGTCTTATCTCA---------------CAG--ATATGTATATATTTATAATTGctttagtttg s panTro5.chr21 3647099 48 + 33445071 C--GAGTCTTATCTCA---------------CAG--ATATGTATATATTTATAATTGctttagtttg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275596 50 + 46275980 CAGGAGTCTTATCTCA---------------CAG--ATATGTATATATTTATAATTGctttagtttg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214630 49 - 13858734 CAGGAGTCGTACCTCA---------------CAG--ATATGTAT-TATTTATAATTGctttagtttg i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155352133 50 - 185818997 CAGGAGTCTCACCTCA---------------CAG--ATATGTATATATTTACAATTGctttagtttg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174835 50 - 192294377 CAGGAGTCTCACCTCA---------------CAG--ATATGTATATATTTACAATTGctttagtttg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652845 50 + 9440265 CAGGAGTCTCACCTCA---------------CAG--ATATGTATATATTTACAATTGctttagtttg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8383888 50 + 21915920 CAGGAGTCTCACCTCA---------------CAG--ATATATATATATTTACAATTGctttagtttg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960288 50 - 90373283 CAGGAGTCTCACCTCA---------------CAG--ATATGTATATATTTACAATTGctttagtttg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127642 50 + 4234846 CAGGAGTCTCACCTCA---------------CAG--ATATGTATATATTTACAATTGctttagtttg i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887520 50 + 50472720 CAGGAGTCTTACCTCA---------------CAG--ATATGGATGTATTTACAATTGCTTTAGTTTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998397 50 + 13128814 CAGGAGTCTTACCTCA---------------CAA--ATATGTATATATTTACAATTGCTTTAGTTTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9572885 52 - 14377064 CAGGAGTCTTACCTCA---------------CAGATATATATATATATTTACAATTGctttagtttg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696295 50 + 9889416 CAGGAGTCTTACCTCA---------------CAG--ATATGTATATATTTACAATTGctttagtttg i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19159649 50 + 47401472 TAGAAGTCTTACCTCA---------------TAG--ATACATATATATTTATGATTGctttagtttg i micMur3.chr31 C 0 I 98 s otoGar3.GL873528 20724746 48 - 38779656 TAGAAGTCTTGCCTCA---------------CAG--AT--ATATATATTTATAATTGCTTTAGTTTG i otoGar3.GL873528 I 170 C 0 s canFam3.chr31 13785459 46 + 39895921 CAGGAGTCTTTCTTCA---------------CAG--AT----ATATATTTACAATTGTTTTAGCTTG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3558746 65 - 6883506 TAGGATTTTTGCCTCATGTTATATATGTGTGTAC--ATAAATAAACATCTATAATTGCTCTAGATTG i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e nomLeu3.chr25 4396991 1015 + 32716333 I a score=774188.000000 s hg38.chr21_KI270874v1_alt 24316 83 + 166743 atctagtgcttactatcatgttgg-ctactatgtactgtctgctagctttcAAGTTCTGTATTCACTTG-AAATGCCCATCTTA-T s panTro5.chr21 3647147 84 + 33445071 atctagtgcttactatcatgttgggctactatgtactgtctgctagctttcAAGTTCTGTAT-CACTTG-AAATGCCCATCTTAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275646 83 + 46275980 atctagtgcttactatcatgttgg-ctactatgtactgtctgctagctttcAAGTTCTGTATTCACTTG-AAATGCCCATCTTA-T i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214679 83 - 13858734 atctagtgcttactatcatgttgg-ctactatgtactgtctgctagctttcAAGTTCTGTATTCACTTG-AAATGCCCATCTTA-T i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155352183 83 - 185818997 atctactgcttactatcatgttgg-ctactatgtactctctgctagcttTAAAGTTCTGTATTCACTTG-AAATGGCCGTCTTA-T i rheMac8.chr3 C 0 I 1 s macFas5.chr3 162174885 83 - 192294377 atctactgcttactatcatgttgg-ctactatgtactctctgctagcttTAAAGTTCTGTATTCACTTG-AAATGGCCGTCTTA-T i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 8652895 83 + 9440265 atctactgcttactatcatgttgg-ctactatgtactctctgctagcttTAAAGTTCTGTATTCACTTG-AAATGCCCGTCTTA-T i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 8383938 83 + 21915920 atctagtgcttactatcatgttgg-ctactatgtactctctgctagcttTAAAGTTCTGTATTCACTTG-AAATGCCCGTCTTA-T i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr2 14960338 83 - 90373283 atctagtgcttactatcatgttgg-ctactatgtactgtctgctagcttTAAAGTTCTGTATTCACTTG-AAATGCCTGTCTTA-T i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012102865v1 2127692 83 + 4234846 atctagtgcttactatcatgttgg-ctactatgtactctctgctagcttTAAAGTTCTGTATTCACTTG-AAATGCCCGTCTTA-T i manLeu1.NW_012102865v1 C 0 I 1 s calJac3.chr21 21887570 83 + 50472720 ATCTAGTGCTTACTATCATGTTGG-CTACCATGTATTGTCTGCTAGCTTAAACCCTCTATATTCACTTG-AAATGCCAGTCTTA-T i calJac3.chr21 C 0 I 7 s saiBol1.JH378168 4998447 83 + 13128814 ATCTAGTGCTTACTATCATGTTGG-CTATCATGTATTGTCTGCTAGCTTTAACATTCTATATTCACTTG-AAACGCCAGTCTTA-T i saiBol1.JH378168 C 0 I 7 s cebCap1.NW_016107322v1 9572937 83 - 14377064 atctagtgcttactatcatgttgg-ctaccatgtattgtctgctagcttTAACATTCTATGTTCACTTG-AAATGCCAGTCTTA-T i cebCap1.NW_016107322v1 C 0 I 7 s aotNan1.NW_018487195v1 8696345 83 + 9889416 atctagtgcttactatcatattgg-ctaccatgtattgtctgctagcttTAACATTCTATATTCACTTG-AAATGCCAGTCTTA-T i aotNan1.NW_018487195v1 C 0 I 7 s otoGar3.GL873528 20724794 81 - 38779656 --GTAGTGCTGAATACCACGTTGG-TTATTCTATTCTGTCTGCTAGCCTCAAAGCTCTGTATTCACTTG-AAATGTCAGCCTCA-T i otoGar3.GL873528 C 0 I 7 s canFam3.chr31 13785505 82 + 39895921 GTCTAGTGTCTAATGCCTTATTGG--TACTACATTCTGTCTGCTAGCCACAAAGCTC-GTATTCACTTGAAAATGCCAACCTTG-T i canFam3.chr31 C 0 I 6 s dasNov3.JH568778 3558811 82 - 6883506 GTCTAGGATCTAATATTATGCTGG--TGCTATATTCTGACTACTAGTTTCAAAGTTCCATGTTCATTTG-AAATGTTTGTCtta-t i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19159699 98 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e nomLeu3.chr25 4396991 1015 + 32716333 I a score=12376.000000 s hg38.chr21_KI270874v1_alt 24399 1 + 166743 A s panTro5.chr21 3647231 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275729 1 + 46275980 A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214762 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398006 1 + 32716333 a i nomLeu3.chr25 I 1015 C 0 s rheMac8.chr3 155352267 1 - 185818997 A i rheMac8.chr3 I 1 C 0 s macFas5.chr3 162174969 1 - 192294377 A i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 8652979 1 + 9440265 A i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 8384022 1 + 21915920 A i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr2 14960422 1 - 90373283 A i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012102865v1 2127776 1 + 4234846 A i manLeu1.NW_012102865v1 I 1 C 0 s calJac3.chr21 21887660 1 + 50472720 A i calJac3.chr21 I 7 C 0 s saiBol1.JH378168 4998537 1 + 13128814 A i saiBol1.JH378168 I 7 C 0 s cebCap1.NW_016107322v1 9573027 1 - 14377064 A i cebCap1.NW_016107322v1 I 7 C 0 s aotNan1.NW_018487195v1 8696435 1 + 9889416 A i aotNan1.NW_018487195v1 I 7 C 0 s otoGar3.GL873528 20724882 1 - 38779656 A i otoGar3.GL873528 I 7 C 0 s dasNov3.JH568778 3558893 1 - 6883506 a i dasNov3.JH568778 C 0 I 808 e micMur3.chr31 19159699 98 + 47401472 I e canFam3.chr31 13785587 6 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=91704.000000 s hg38.chr21_KI270874v1_alt 24400 11 + 166743 AAAGCA-G----------TG-GT s panTro5.chr21 3647232 13 + 33445071 AAAGCACG----------TGTGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275730 11 + 46275980 AAAGCA-G----------TG-GT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214763 11 - 13858734 AAAGCA-G----------TG-GT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398007 11 + 32716333 aaaGCA-G----------TG-GT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155352268 11 - 185818997 AAAGTA-G----------TG-GT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174970 11 - 192294377 AAAGTA-G----------TG-GT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652980 11 + 9440265 AAAGTA-G----------TG-GT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384023 11 + 21915920 AAACTA-G----------TG-GT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960423 21 - 90373283 AAAGTA-GTGGTATATTATG-GT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127777 11 + 4234846 AAAGTA-G----------TG-GT i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887661 11 + 50472720 AAAGCA-G----------TG-GC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998538 11 + 13128814 AAAACA-G----------TG-GT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573028 11 - 14377064 AAAACA-G----------TG-GT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696436 11 + 9889416 AAAACA-G----------TG-GT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20724883 11 - 38779656 AACATA-G----------TG-GT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785593 11 + 39895921 AAAACA-A----------CA-AC i canFam3.chr31 I 6 I 14 s dasNov3.JH568778 3559702 11 - 6883506 aaaGCA-C----------TG-GT i dasNov3.JH568778 I 808 C 0 e micMur3.chr31 19159699 98 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=545141.000000 s hg38.chr21_KI270874v1_alt 24411 54 + 166743 ATATTATGACATACAATGATTTTAGGAAACTCC--ACTGAAGAAAT----------------AAATTTAGAA s panTro5.chr21 3647245 55 + 33445071 ATATTATGACATACAATGATTTTAGGAAACTTCCAACTGAAGAA-T----------------AAATTTAGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275741 54 + 46275980 ATATTATGACATACAATGATTTTAGGAAACTCC--ACTGAAGAAAT----------------AAATTTAGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214774 54 - 13858734 ATATTATGACATACAATGATTTTAGGAAACTCC--ACTGAAGAAAT----------------AAGTGTAGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398018 54 + 32716333 GTATTATGACATACAGTGATTTTAGGAAACTCC--ACTGAACAAAT----------------AAATTTAGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155352279 54 - 185818997 ATATTATGACATACAGTGATTTTAGGGAACTCC--ACTGAAGAAAT----------------AAATTTAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162174981 54 - 192294377 ATATTATGACATACAGTGATTTTAGGGAACTCC--ACTGAAGAAAT----------------AAATTTAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8652991 54 + 9440265 ATATTATGACATACAGTGATTTTAGGGAACTCC--ACTGAAGAAAT----------------AAATTTAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384034 54 + 21915920 ATATTATGACATACAGTGATTTTAGGGAACTCC--ACCGAAGAAAT----------------AAATTTAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960444 54 - 90373283 ATATTATGACATACAGTGATTTTAGGGAACTCC--ACTGAAGAAAT----------------AAATTTAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127788 54 + 4234846 ATATTATGACATACAGTGATTTTAGGGAACTCC--ACTGAAGAAAT----------------AAATTTAAAA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887672 53 + 50472720 ATATTATGACATACAGTGATTTTAGGGAACTCC--ACTGAAGAGTT----------------CTGT-TAGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998549 53 + 13128814 ATATTATGACATTCCGTGATTTTGGGGAACTCC--AATGAAGAGTT----------------CTGT-TAGAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573039 53 - 14377064 ATATTATGACATACAGTGATTTTAGGGAGCTCC--ACTGAAGAGCT----------------CTGT-TAGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696447 53 + 9889416 ATATTATGACATACAGTGATTTTAGGGAACTCC--ATTGAAGAGTT----------------CTGT-TAGAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19159797 54 + 47401472 ATATTATGATATAGAATGAGTTCAGGAAGCTTC--ACTTAAGAAAT----------------AAATTTAAAA i micMur3.chr31 I 98 C 0 s otoGar3.GL873528 20724894 53 - 38779656 CAATTATGACATAGAGTGAATTCAGGGA-CTCC--ACCCAGGAAAT----------------AAAATTAAAA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785618 67 + 39895921 ATATTATGACACAGA---ACTCCAGTGAACTCC--ACTTAAAAAATGTGGAACTCTTTATAGAATTTTAAAA i canFam3.chr31 I 14 I 144 s dasNov3.JH568778 3559713 51 - 6883506 ACACTGTTACATAGAATGATTTTAGTGAGTTCT--ACTCAA---AT----------------AAATTTGGAA i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=1439263.000000 s hg38.chr21_KI270874v1_alt 24465 139 + 166743 TTCTGTC-ATG----------TAAGATTT----------------------TAAAAATCAAAAACTACTGGGGCTT-TTCCTAGAG-ATTATCATTATTCCTTTTTATTAATAATAACTTCTAGC-CCTTATGGACTGTAT------TACTATGTTCATGTTC----AGCTAGACAATGGTGAGG s panTro5.chr21 3647300 137 + 33445071 TTCTGTCTATG----------TACGATTT----------------------TAAAATCAAAAAACTACTGG--CTTATTCCTAGAG-ATTATCATTATTCCTTTT-ATTAATAATAACTTCTAGCGCCTTA-GGACTGTAT-------ACTATGTTCATGTTC----AGCTGGACAATGCTGAGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275795 139 + 46275980 TTCTGTC-ATG----------TAAGATTT----------------------TAAAAATCAAAAACTACTGGGGCTT-TTCCTAGAG-ATTATCATTATTCCTTTTTATTAATAATAACTTCTAGC-CCTTATGGACTGTAT------TACTATGTTCATGTTC----AGCTGGACAATGGTGAGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214828 139 - 13858734 TTCTGTC-ATG----------TAAGATTT----------------------TAAAAATCAAAAACTACTGAGGCTT-TTCCTGGAG-ATTATCATTATTCCTTTTTATTAATAATAACTTCTACC-CCTTATGGACTGTAT------TACTATGTTCATGTTC----AGCTAGACAATGGTGAGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398072 139 + 32716333 TTCTGTT-ATG----------TAAGATTT----------------------TAAAAATCAAAAACTACTGGGGCTT-TTCCTGGAG-ATTATCATTATTCCTTTTTATTAATAATAACTTCTACC-CCTTATAGACTGTAT------TACTATGTGCATGTTC----AGCTAGACAATGGTGAGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155352333 139 - 185818997 TTCTGTT-ATG----------TACGATTT----------------------TAAAAATCAAAAACTACTGGGACTT-TTCCCAGAG-ATTATCATTATTCCTTTTTACTAATAATAATTTCTACC-CCTTATGGACTGTAT------CACTATGTTCATGTTC----AGCTAGACAATGGTGAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162175035 139 - 192294377 TTCTGTT-ATG----------TACGATTT----------------------TAAAAATCAAAAACTACTGGGACTT-TTCCCAGAG-ATTATCATTATTCCTTTTTACTAATAATAATTTCTACC-CCTTATGGACTGTAT------CACTATGTTCATGTTC----AGCTAGACAATGGTGAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653045 139 + 9440265 TTCTGTT-ATG----------TACGATTT----------------------TAAAAATCAAAAACTACTGGGACTT-TTCCCAGAG-ATTATCATTATTCCTTTTTACTAATAATAATTTCTACC-CCTTATGGACTGTAT------CATTATGTTCATGTTC----AGCTAGACAATGGTGAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384088 135 + 21915920 TTCTGTT-ATG----------TAAGATTT----------------------TAAAAATC-AAAACTACTGGGACTT-TTCCCAGAG-ATTATCATTATTCCTTTTTAC---TAATAATTTCTACC-CCTTATGAACTGTAT------CACTATGTTCACGTTC----AACTAGACAATGGTGAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960498 139 - 90373283 TTCTGTT-ATG----------TAAGATTT----------------------TAAAAATCAAAAACTACTGGGACTT-TTCCCAGAG-ATTATCATTATTCCTTTTTACTAATAATAATTTCTACC-CCTTATAGACTGTAG------CACTATGTTCATGTCC----AGCTAGACAACGGTGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127842 135 + 4234846 TTCTGTT-ATG----------TAAGATTT----------------------TAAAAATC-AAAACTACTGGAACTT-TTCCCAGAG-ATTATCATTATTCCTTTTTAC---TAATAATTTCTACC-CCTTATGAACTGTAT------CACTATGTTCACGTTC----AACTAGACAATGGTGAGG i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887725 116 + 50472720 ATCTGTT-ATG----------TGGGACTT----------------------TAAAAATCAAAAACTACTGGGGCTT-TTCCTAGAG-ATTATCATTATTCCTTTTTA-----------TTTTA-T-TTTTATGGACTGTAT------TACTATGTTCACGTTC----TGCT-----------AGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998602 139 + 13128814 ATCTGTT-ATG----------TGGGACTT----------------------TAAAAATCAAAAACTACCGGGGCTT-TTCCTAGAG-ATTATCATTATTCCtttttattaataataatttttaCC-TTTTATGTACTGTAT------TACTGTGTTCACATTC----AGCTACACAATAGTGAGG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573092 139 - 14377064 ATCTGTT-ATG----------TGGGACTT----------------------TAAAAATCAAAACCTACTGGGGCTT-TTCCTAGAG-ATTATCATTATTCCTTTTTATTAATAATAATTTTTGCC-TTTTATGGACTGTAT------TACTATGTTCACGTTC----AGCTAGACAATGGTGAGG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696500 139 + 9889416 ATCTGTT-ATG----------TGGGACTT----------------------TATAAATCAAAAACTACTGGGGTTT-TTCCTAGAG-ATTATCATTATTCCTTTTTATTAATAATAATTTTTACC-TTTTATGGACTGTAT------TACTATGTTCACGTTC----AGCTAGACAATGGTGAGG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19159851 149 + 47401472 TTCTGTT-ATG----------TGTGATTT----------------------TAAAAATCAAGGACTAATAGGACTT-ATTCAGGAG-ATGGTCATTATTCCTTTTAATTTATAATAATTTCTACC-CCTTACTGACTGTGTTATTAATACTAtgttcatgttcaaataactagacaatggcaaga i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20724947 142 - 38779656 TTCTGTT-ATG----------TGGGATTT----------------------TAAAAATCAAGAACTAACAGGAGTT--TCTAGGAG-ATGACCATTGTTTCTTTTTATTTATTATAATTTCTACC-TTTTACTGACTGTgt------tactatgtccaagttcaaatagctagacaatagcaaga i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13785829 171 + 39895921 gtctctc-atgaataaataaataaaatattctaaaaaaaaCAAATAAAAAATAAAAATCAAGGACTACCAGTACTT-GCTTAGAAA-ATGGTCATTATTCCTTTTCT----TAATAATTGCTGTC-TCTTATTGAGTGTgt------tactatgtccgtgatcaaatagctagaaaatggcaagg i canFam3.chr31 I 144 C 0 s dasNov3.JH568778 3559764 143 - 6883506 TTTTGGT-ACA----------TGGGATTT----------------------TAAAATTCAAGGACTACCAGTATTT-GTCTAGAAATATGGCCATTATTTCTTTTTATTCATAATAATTTTTACC-CTTTACTGAATGCAT-------ACTATGTCCATGGTCAGATAGCTAGGCAAAGGCAAGG i dasNov3.JH568778 C 0 I 5551 e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=935771.000000 s hg38.chr21_KI270874v1_alt 24604 92 + 166743 TTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTGCTCTTTTCTTTATAG--CACACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT s panTro5.chr21 3647437 93 + 33445071 TTGAAATCTAAAGACATTTTTCAA-GGAAGACTGTACTCTTTTCTTTATAGGGCACACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17275934 92 + 46275980 TTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTATAG--CACACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3214967 91 - 13858734 TTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTATAG--CACACTACCTCTATTTTATTAAGCAACGATAAC-AAAAAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398211 90 + 32716333 TTGAAATCTAAAGACATTTTTCAAAGGAAGAC--TACTCTTTTCTTTATAG--CACACTGCCTGTATTTTATTAAGCAAGGGTAACTAAAAGGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155352472 89 - 185818997 TTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTGG--CACACTGCCTTTATTTTATTAAGCAAGGGTAACTAAAA--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162175174 89 - 192294377 TTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTGG--CACACTGCCTTTATTTTATTAAGCAAGGGTAACTAAAA--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653184 89 + 9440265 TTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTGG--CACACTGCCTTTATTTTATTAAGCAAGGGTAACTAAAA--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384223 92 + 21915920 TTGAAATCTGAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTAG--CACACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960637 92 - 90373283 TTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTAG--CATACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2127977 92 + 4234846 TTGAAATCTAAAGACATTTTTCAAAGGAAGACTGTACTCTTTTCTTTGTAG--CACACTGCCTCTATTTTATTAAGCAAGGGTAACTAAAAGGT i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887841 92 + 50472720 CTGAAATCTAAAGACATTTATGAAAAGAAGACTGTATTCTTTTCTTTATAC--CATACGGCCTCCATTTAATTAAGCAAAGATAACTAAAAAGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998741 92 + 13128814 CTGAAATCTAAAGATGTTTATGAAAAGAAGACTGTATTCTTTTCTTTATAC--CACACAGCCTCTATTTAATTAAGCAAAGATTGCTAAAAGGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573231 92 - 14377064 CTGAAATCTAAAGACATTTATGAAAAGAAGACTGTATTCTTTTCTTTATAC--CACACAGACTCTATTTAATTAAGCAAAGATAACTAAAAGTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696639 92 + 9889416 CTGAAATCTAAAGACATTTATGAAAAGAAGACTGTATTCTTTTCTTTATAC--CACACAGCCTCTATTTAATTAAGCAAAGATAACTAAAAGGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19160000 92 + 47401472 ctggaatttaaagactttttaacaacaaagactatattcttttctttatac--cacactgtttcTATTTAATTAAGCAAGGGTAATTAAAATAT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20725089 90 - 38779656 ctagaattgaaggac--tttaaaaacaaaggccgtatttttttctttatgc--cacactacttctATTTAATTAAGCAAGGGTCATTAAAATAT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13786000 91 + 39895921 ctgaaatttaaagactttttaacaaaaaagactat-ccctcttctttatcc--cacactgattctATTTAATTAATCAAGAGTCATTAAggggt i canFam3.chr31 C 0 I 125 e dasNov3.JH568778 3559907 5551 - 6883506 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=964892.000000 s hg38.chr21_KI270874v1_alt 24696 99 + 166743 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTC-------------TGTCAGATTC--CTTCCCTTATTCTTAGCCAATT-CTAATTGTGGTA---GATTTGTTTTT-GTCTG-GTGGGTTTTATG s panTro5.chr21 3647530 100 + 33445071 TGTGCTTAC-----------------------------------------AATCTT-------------------AAAAAATGTCTTC-------------TGTCAGATTCGCCTTCCCTTATTCTTAGCCAATTTCTAAttgtggta-----tttgttttttgtctgtgtg---tttatg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276026 99 + 46275980 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTC-------------TGTCAGATTC--CTTCCCTTCTTCTTAGCCAATT-CTAATTGTGGTA---GATTTGTTTTT-GTCTG-GTGGGTTTTATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215058 99 - 13858734 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTC-------------TGTCAGATTC--CTTCCTTTATTCTTAGCCAATT-CTAATTGTGGTA---GATTTGTTTTT-GTCTC-GTGGGTTTTATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398301 102 + 32716333 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTC-------------TGTCAGATTC--CTTCCCTTATTCTTAGCCAATT-CTAATTGTTGTAGTAGATTTGTTTTT-GTTTC-GTGGGTTTTATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155352561 102 - 185818997 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGGTGGTC-------------TGTCAGATTC--CTTCCCTTATTCTTAGCTGATT-TTAATTGTTGTAGTAGATTTGTTTTT-GTTTC-ATGGGTTTTATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162175263 102 - 192294377 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGGTGGTC-------------TGTCAGATTC--CTTCCCTTATTCTTAGCTGATT-TTAATTGTTGTAGTAGATTTGTTTTT-GTTTC-ATGGGTTTTATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653273 102 + 9440265 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGGTGGTC-------------TGTCAGATTC--CTTCCCTTATTCTTAGCTGATT-TTAATTGTTGTAGTAGATTTGTTTTT-GTTTC-ACGGGTTTTATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384315 102 + 21915920 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTC-------------TGTCAGATTC--CTTCCCTTATTCTTAGCCGATT-TTAATTGTTGTAGTAGATTTGTTTTT-GTTTC-ATGGGTTTTATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960729 102 - 90373283 TGT-CTTGC-----------------------------------------AATCTT-------------------ACAAAAGATGGTC-------------TGTCAGATTC--CTTCCCTTATTCTTAGCCGATT-TTATTTGTTGTAGTAGATTTGTTTTT-GTTTC-ATGGGTTTTATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2128069 102 + 4234846 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAATATGGTC-------------TGTCAGATTC--CTTCCCTTATTCTTAGCCGATT-TTAATTGTTGTAGTAGATTTGTTTTT-GTTTC-ATGGGTTTTATG i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21887933 101 + 50472720 TGT-CTTAC-----------------------------------------AA-CTT-------------------ACAAAAGATGATA-------------TGTCAGATTC--CTTCTCTTATTTGTAGCCAATT-CTAATTGTTGTAGTAGATTTGTTTTT-GTTTC-ATGGGTTTTATG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998833 101 + 13128814 TGT-CTTAC-----------------------------------------AA-CTT-------------------ACAAAAGATGATC-------------TGTCAGATTC--CTTCTCTTATTCGTAGCCAATT-CTAATTGTTGTAGTGGATTTGTTTTT-GTTTC-ATGGGTTTTATG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573323 99 - 14377064 TGT-CTTAC-----------------------------------------AA-CTT-------------------ACAAAAGATGA---------------TGTCAGATTC--CTAATCTTATTCGTAGCCAATT-CTAATTGTTGTAGTAGATTTGTTTTT-GTTTC-ATGGGTTTTATG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696731 101 + 9889416 TGT-CTTAC-----------------------------------------AA-CTT-------------------ACAAAAGATGATC-------------TGTCAGATTC--CTTCTCTTATTTGTAGCCAATT-CTAATTGTTGTAGAAGATTTGTTTTT-GTTTC-ATGGGTTTTATG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19160092 99 + 47401472 TGT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGAGGGTC-------------TCTCAGATTC--CTTCCCTTATTCTTAGACAATT-CTAATTGTTGC---AGATTTGTTTTT-GTGTC-CCGGGTTTTATG i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20725179 101 - 38779656 TAT-CTTAC-----------------------------------------AATCTT-------------------ACAAAAGATGGTC-------------TATCAGATTC--CTTCCTTCATTCATAGATGACT-CTAATGGTTGCG-TAGGTGTGTTTCT-GTGTC-CTGGGTTTCATG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13786216 160 + 39895921 tgc-cttgctccccttgcttgtgctctctctctatcaagtaaataaataaaatctttTTTAAAAATCAAAGGTCATTAAAAGATTGTCTTGCATTCTTGTATCTCATATCC--CTTCCCTTATTCTCAGCCAATT-CTAACTGTTGCAGTAGATTGGTTTTA-GG---------------- i canFam3.chr31 I 125 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=285538.000000 s hg38.chr21_KI270874v1_alt 24795 30 + 166743 TTTTTTATTTACACCTCTTTGTTCTTGGTT s panTro5.chr21 3647630 30 + 33445071 ttttttatttacacctctttgttcttggtt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276125 30 + 46275980 TTTTTTATTTACACCTCTTTGTTCTTGGTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215157 30 - 13858734 TTTTTTATTTACACCTCTTTGTTCTTGGTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398403 30 + 32716333 TTTTTTATTTACACCTCTTTGTTCTTGGTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155352663 30 - 185818997 TTTTTTCTTTACACCTGTTTGTTCTTGGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162175365 30 - 192294377 TTTTTTCTTTACACCTGTTTGTTCTTGGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653375 27 + 9440265 TTTTTTCTTTA---CTGTTTGTTCTTGGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384417 29 + 21915920 -TTTTTCTTTACACCTGTTTGTTCTTGGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960831 30 - 90373283 TTTTTTCTTTACACCTGTTTGTTCTTGGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2128171 29 + 4234846 -TTTTTCTTTACACCTGTTTGTTCTTGGTT i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21888034 30 + 50472720 CTTTTTCTTTATACGTCTTTGTTCTTGGTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998934 30 + 13128814 CTTTTTCTTTACACGTCTTTGTCCTTGGTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573422 30 - 14377064 CTTTTTCTTTACATGTCTTTGTTCTTGGTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696832 30 + 9889416 CTTTTTCTTTACACGTCTTTGTCCTTGGTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19160191 30 + 47401472 CTTTTTCCTCATAGCTCTTTGTTCTTGGTT i micMur3.chr31 C 0 I 468 s canFam3.chr31 13786376 30 + 39895921 CTTTTTACTCACAGCCTTCAATTCTTGGTT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e otoGar3.GL873528 20725280 0 - 38779656 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=667577.000000 s hg38.chr21_KI270874v1_alt 24825 78 + 166743 TCATTATCAATAATTTCTTAAA-------TTTGGAGGA-----GGTCAGACAGTTATCTAGCCTCTGGGGACTCAACTATGGTCCCTTCT s panTro5.chr21 3647660 75 + 33445071 tCATTATCATTAATTTCTTAA--------TTTGGAGG------GGTCAGACAGTTATCTAGACTCTGGG-ACTCAACTATGGTCCCTTCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276155 78 + 46275980 TCATTATCAATAATTTCTTAAA-------TTTGGAGGG-----GGTCAGACAGTTATCTAGCCTCTGGGGACTCAACTATGGTCCCTTCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215187 78 - 13858734 TCATTATCAATAATTTCTTAAA-------TTTGGAGGG-----CGTCAGACAGTTATCTAGCCTCTGGGGATTCAACTATGGTCCCTTCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398433 78 + 32716333 TCATTATCAATAATTTCTTAAA-------TTTGGAGGG-----GGTCAGACAGTTATCTAGCCTCTGGGGACCCAACTATGCTCCCTTCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155352693 83 - 185818997 TCATTATCAATAATTTCTTAAA-------TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162175395 83 - 192294377 TCATTATCAATAATTTCTTAAA-------TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653402 83 + 9440265 TCATTATCAATAATTTCTTAAA-------TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384446 83 + 21915920 TCATTATCAATAATTTCTTAAA-------TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTCCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960861 83 - 90373283 TCATTATCAATAATTTCTTACA-------TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2128200 83 + 4234846 TCATTATCAATAATTTCTTAAA-------TTTGGAGGGGGGTTGGTCAGACAGTTATCTAGCCTCTGGAGACTCAACTATGGTCCCTTCT i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21888064 80 + 50472720 TCATTATCAATAATTTCTTAAA-------TTTGGGGTGGG---GGTCAGACAATTATCTAGCCTCTGGAGACTCAATTATTGTCCCTTCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4998964 78 + 13128814 TCATTATCAATAATT--TTAAA-------TGGGATGGGGG---GGTCAGACAATTATCTAGCCTCTGGAGATTCAGCTATTGTCCCTTCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573452 80 - 14377064 TCATTATCAATAATTTCTTAAA-------TTTGGAGTGGG---GTTCAGACAATTATCTAGCCTCTGGAGACTCAACTATTGTCCCTTCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696862 76 + 9889416 TCATTATCAATAATTTCTTAAA-------TTTG----GGG---GGTCAGACAATTATCTAGCCTCTGGAGACTCAACTATTGTCCCTTCT i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13786406 77 + 39895921 TCATCAACAATAATTTTTTAAATATCCTTTTTA----------GATCAGACATCTGTCTAACCTCTGGAGCCTTAAA---GGCCTCTAGT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160221 468 + 47401472 I e otoGar3.GL873528 20725280 0 - 38779656 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=3895310.000000 s hg38.chr21_KI270874v1_alt 24903 432 + 166743 CTCAATGATTTTAAGATGTGGT-------------------GAACAAATT-CACTACCTGGTGAAGCTAAAGTGCAGGATTTCTTCACTGTTCTCTGAGTATGCATGATTGTCAGATATATCAACTTTCA-GATAATGAACACATGGCACCATTGTTGTCT-CTGAGACTTGAGG-ATGAGGTGAGG----AAAACCATCAATAGTGGTTGAATTTCTACGA-TTC-CAGGATTCCTATAAACCATGGACGAGATGTCGTAGAGAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAAACTC--TGAG-CTTTTGACTCCTGATACATAATTGG-----------------------ATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTAAAGACTTGCATGTCTAAAAAAGAAAATGGGGGAAGTATTTTTTG-GTCCAAA-ACACCACAAAAAAT s panTro5.chr21 3647735 430 + 33445071 CTCAATGATTTTAAGATGTGGT-------------------GAAAAAATTTCACCACCTGGTGAAGCTAAAGTGCAGGCTTTCTTCACTGTTCTCTGAGTATGCATGATTGTCAGATATAT-AACTTTCA-GATAATGAACACATGGCAC-ATTGTTGTCTTCTGAGACTTGAGG-ATGAG-TGAGG----AAAACCATCA-TAGTGGTTGAATTTCTACGAATTCGCAGGATTC-TATAAACCATGGACGAGATGTCGTAGAGAGGGTATAAGTG-AGGGCAGGATGTAGAGTTCCACTTGTATATGAAACTC--TGAG-CTTTTAACTCTTGATACATAATTGG-----------------------ATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTA-GAGCTTTTCAGTAAAGACTTGCATGTCTAAAAAAGAAAATGGGGGAAGTATTTTTTG-GTCCAAACACAGCAAAAAAAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276233 432 + 46275980 CTCAATGATTTTAAGATGTGGT-------------------GAAAAAATT-CACTACCTGGTGAAGCTAAAGTGCAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-GATAATGAACACATGGCACCATTGTTGTCT-CTGAGACTTGAGG-ATGAGGTGAGG----ACAACCATCAATAGTGGTTGAATTTCTACGA-TTC-CAGGATTCCTATAAACCATGGAAGAGATGTCGTAGAGAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAAACTC--TGAG-CTTTTGACTCCTGATACATAATTGG-----------------------ATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTAAAGACTTGCATGTCTAAAAAAGAAAATGGGGGAAGTATTTTTTG-GTCCAAA-ACACCACAAAAAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215265 454 - 13858734 CTCAATGATTTTAAGATGTGGT-------------------GAAAAAATT-CACTACCTGGTAAAGCTAAAGTGCAGGCTTTCTTCACTGTTCTCTGAGTGTGCATGATTGTCAGATATATCAACTTTCA-GATAAT-AACACATAGCACCATTGTTGTCT-CTCAGAGTTGAGG-ATGAGGTGAGG----AAAACCATCAATAGTGGTTGAATTTCTACGA-TTC-CAGGATTCCTATAAACCATGGGCGAGATGTCATAGAGAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAAACTC--TGAG-CTTTTGACTCCCGACACATAATTGGATATAAACAGCTTTTCTATTTGTATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTAAAGCCTTGCATGTCTAAAAAAGAAAGTGGGGGAAGTATTTTCTG-GTCCAAA-ACACCACAAAAAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398511 432 + 32716333 CTCAATGATTTTAAGATCTGGT-------------------GAAAAAATT-CACTACCTGGTAAAGCTAAAATGCAGGCTTTCTTCACTGATCTCTGAGTATGTGTGATTGTCAGATATATCAACGTTCA-GATAATGAACACATGGCACCATTGTTGTCT-CTGAGAGTTGAGG-ATGAGGTGAGG----AAAACCATCAACAGTGGTTGAATTTCTACAA-TTC-CAGGATTCCTATAAACCATGGACGAGATGTCGTAGAGAGGGTATAAGTAGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAAACTC--TGAG-CTTTTGACTCCCGAAACATAATTCG-----------------------ATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATAGCCTTGCATGTCTGAAAAAGAAAATGGGGGAGGTATCTTTTG-GTCCAAA-ACACCACAAAAAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155352776 432 - 185818997 CTCAATGATTTTAACATCTGGT-------------------GAAAAAATT-CACTACCTGGTAAAGCTAAAGTACAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-GATAATGAAAGCATGGCACCATTGTTTTCT-CTAAGAGTTGAGG-ATGAGATGAGG----AAAATCATCAATGTCGGCTGAATTTCTACGA-TTC-CAGGATTCCTATAAAGCATGGACAAGGTGTCATAGATAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTACGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGG-----------------------ATATAAACAGCTTTACTGTTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATACCCTTCCATGTCTAAAAATGAAAATGGGGGAGGTATCTTTTG-GTCCAAA-ACACCAAGAAAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162175478 432 - 192294377 CTCAATGATTTTAACATCTGGT-------------------GAAAAAATT-CACTACCTGGTAAAGCTAAAGTACAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-GATAATGAAAGCATGGCACCATTGTTTTCT-CTAAGAGTTGAGG-ATGAGATGAGG----AAAATCATCAATGTCGGCTGAATTTCTACGA-TTC-CAGGATTCCTATAAAGCATGGACAAGGTGTCATAGATAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTACGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGG-----------------------ATATAAACAGCTTTACTGTTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATACCCTTCCATGTCTAAAAATGAAAATGGGGGAGGTATCTTTTG-GTCCAAA-ACACCAAGAAAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653485 432 + 9440265 CTCAATGATTTTAACATCTGGT-------------------GAAAAAATT-CACTACCTGGTAAAGCTAAAGTACAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-GATAATGAAAGCATGGCACCATTGTTTTCT-CTAAGAGTTGAGG-ATGAGATGAGG----AAAATCATCAATGTCGGCTGAATTTCTACGA-TTC-CAGGATTCCTATAAAGCATGGACAAGGTGTCATAGATAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTACGTGAAACTC--TGAG-CTTTTGATTCCTGACACAAAATTGG-----------------------ATATAAACAGCTTTACTGTTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATACCCTTCCATGTCTAAAAATGAAAATGGGGGAGGTAGCTTTTG-GTCCAAA-ACACCAAGAAAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384529 432 + 21915920 CTCAATGATTTTAAGATCTAGT-------------------GAAAAAAAT-CACTACCTGGTAAAGCTAAAGTACAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-GATAATGAAAGCATGGCACCATTGTTTTCT-CTAAGAGTTGAGG-ATGAGGTGAGG----AAAATCATCAATATCGGCTGAATTTCTACGA-TTC-CAGGATTCCTATAAAGCATGGACAAGGTGTCATAGATAGGGTATAAGTGGAAGGCAGGATGTAGAGTTCCACTTGTACGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGG-----------------------ATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATACCCTTCCATGTCTAAAAATGAAAATGGGGGAGGTATCTTTTG-GTCCAAA-ACACCAAGAAAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14960944 431 - 90373283 CTCAGTGATTTTAAGATCTGGT-------------------GAAAAAAAT-CACTACCTGGTAAAGCTAAAGTACGGGCTTTCTTCACTGTTCTCTGAGTAGGCGTGATTGTCAGATATATCAACTTTCA-GACAATGAAAGCACAGCACCATTG-TTTCT-CTAAGAGTTGAGG-ATGAGGTGAGG----AAAACCATCAATATCGGTTGAATTTCTACAA-TTC-CAGGATTCCTATAAAGCATGGACAAGGTGTCGTAGATAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTATGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGG-----------------------ATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTACACCCTTCCATGTCTAAAAGAGAAAACGGGGGAGGTATATTTTG-GTCCAAA-ACACCACGAAAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2128283 432 + 4234846 CTCAATGATTTTAAGATCTGGT-------------------GAAAAAAAT-TACTACCTGGTAAAGATAAAGTACAGGCTTTCTTCACTGTTCTCTGAGTATGCGTGATTGTCAGATATATCAACTTTCA-GATAATGAAAGCATGGCACCATTGTTTTCT-CTAAGAGTTGAGG-ATGAGGTGAGG----AAAATCATCAATATCAGCTGAATTTCTACGA-TTC-CAGGATTCCTATAAAACATGGACAAGGTGTCATAGATAGGGTATAAGTGGAGGGCAGGATGTAGAGTTCCACTTGTACGTGAAACTC--TGAG-CTTTTGATTCCTGACACATAATTGG-----------------------ATATAAACAGCTTTTCTATTTGTAAAGGGGAAGGCATTAGGAGCTTTTCAGTATACCCTTCCATGTCTAAAAATGAAAATGGGGGAGGTATCTTTTG-GTCCAAA-ACACCAAGAAAAAC i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21888144 436 + 50472720 CTCAATGATTTTAAGATTTGTT-----------------AAAAAAAATTT-CACTACCTGGTAAAGCTGAAGTGCAGGCTTTCTTCACTGCTTTCTGAGTGTGCAGGATTGTCAGAAATATCACCTTTCA-GTTAATAAAAATGTGACACCATTGTTCTCT-GTGAAAGTTGATG-ACGAGGAAGGG----AAAAGCATCAATATTGGTTGAATTTCTAGGA-TTC-CAGGATTTCTATAAACCATGGACAAGGTGTCATAGAGAGGGTGTAAGTGGAGGGCAGGATGTGGAGTTCCACTTGCAGGTGAAACTCTTTGTG-TTTTTGACTCCTGACACATAATTGC-----------------------ATATAAACAGCTTTTTTATTTTTAAAGGGAAAGGCATTGGGAGCTTTTCAGTATAGCTTTCCACGGCTAAAAACAAAAATGAGGGAGGTATGTTTTG-ATCCAAA-ACACCATGAAAGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4999042 429 + 13128814 CTCAATGATTTTAAGATATGGT--------------AAAAAAAAAAAAAT-CACTACCTGGTAAAGCTGAAGTGCAGGCTTTCTTCACTGTTTTCTGAGTGTGCAGGATTGTCAGAAATATCAACTTTCA-GTTAATAAAAACATGACAAAATTGTTCTCT-CTGAGAGTTGATG-ACGAGGAAGGG----AAAAGC------ATTGGTTGAATTTCTAGGA-TTC-CAGGATTTCTATAAACCATGGACAAGGTGTCGTAGAGAGGGTATAAGTAGGGGACAAGATGTGGAGTTCCACTTGCAGGTGAAAC----TGAG-TTTTTGACTCCTGACACATAATTGG-----------------------ATATAAACGGCTTTTTTATTTGTAAAGGGAAAGGCATTGGGAGCTTTTCAGTATAGCTTTCCATAGCTAAAAACAAAAATGAGGGAGGTATGTTTTG-ATCCAAA-ACACCATGAAAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573532 452 - 14377064 CTCAATGATTTTAAGATATGGTaaaaaaaaaaaaaaaaaaaaaaaaaaTT-CACTACC-AGTAAAGCTGAAGTGCAGGCTTTCTTCACTGTTTTCTGAGTGTGCAGGATTGTCAGAAATATCAACTTTCA-GTTAATAAAAACATGACACCATTGTTCTCT-CTGAGAGTTGATG-ACGAGGAAGGG----AAAAGCATCAATATTGGTTGAATTTCTAGGA-TTC-CAGGATTTCTATAAACCATGGACAAGGTGTCGTAGAGAGCGTGTAAGTGGAGGGCAGGATGTGGAGTTCCACTTGCAGGTGAAACTCTTTGAG-TTTTTGACTCCTGACACATAATTGG-----------------------ATATAAACAGCTTTTTTATTTGTAAAGGGAAAGGCATTGGGAGCTTTTCAGTATAGCTTTCCATGGCTAAAAACAAAAATGAGGGAGGTATGTATTG-ATCCAAA-ACACCATGAAAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8696938 430 + 9889416 CTCAATGATTTTAAGATACGGT-----------------AAAAAAAAATT-CACTACCTGGTAAAGGTGAAGTGCAGGTTTTCTTAACTGTTTTCTGACTGTGCAGAATTGTCAGAAATATCAACTTTCA-GTTAATAAAAACATGACACCATTGTTCTCT-CTGAAAGTTGATG-ACGAGGAAGGG----AAAAGCATCAATATTGGTTGAATTTCTA-GA-TTC-CAGGATTTCTATAAACCATGGACAAGGTGTC---GAGAGGGTATAAGTGGAGGGCAGGATGTGGAGTTCGGCTTGCAGGTGAAACTC--TGAG-TTTTTGACTCCTGACACATAATTGG-----------------------ATATAAACAGCTTTTCTATTTGTAAAGGGAAAGGCATTGGAAGCTTTTCAGTATAGCTTTCCATGGCTAAAAACAAAAATGAGGGAGGTATGTTTTG-ATCCAAA-ACACCATGAAAAAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20725280 409 - 38779656 CACAATAATTTTAGGATGTGCT------------------ACAAAAAAAT-TACTATCTGGCAAAGCTAAAATATAGCTTTCCTTCACTGTTTTCTGAGTGTCTATGACTTTTAGAAGCATCTACTTACATTTTCATAAAACTATGATATTGCTG-GGTCT-ATGAGAGTTGGTGTCTGAGGCCAGGTGTAAAAAGCCCCTATACTGGTTGAATTTCCAGGA-TTT-TAGG-TTCCAATAAAACATGGATAAGGTGAGGTAGAGAAGG---------------------AGAGTGCCACTTGTAGGTGAAACTA--TGAG-TTTTTGACTCCTAATATATGACTGA-----------------------ATAT-------TTTTCTATTTGTAGAGAGAAGAATACCAGTTGCTTTTCAGCATAGCTTTCCCTGGCTACAGA-GGAAATAGGAGAAGTATTTTTGT-ATCTAAAAACTCCATGATAGAG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13786483 433 + 39895921 CTCAATAATTTTAGAATCCAGT-------------------GAAAATATT-CGCTATCTGGTAAAGCTAAAATATGGGCTTCCTTCACTATTTTCCAAGTGTGTGTAATCGTGAGAAGGATCCACTTTCATTTTCATACAGCCATGAGACCACTGGAATCT-CTGAGAATTGAGGGACCAGGTAAGG----AAATTCACCAATATTGGTTGAATTTGCAGGA-TTC-CAGAGTTCCCATAAACCATGAAGAATGTGTGGTAGAGAAAGTAAAAGTAGAGGGTAGGACATGAAATTCCACTTATAGGTAAAGGTC--TATGAATTTTGACTTCTGATATATAACTGA-----------------------ATATAAATACCTTTTCCACTTGTAAAGAGA---GTAATGGGTGATTTTCAGTATAGCTTTCCAAGACTAAAAA-GAAAATTACAGAGATATATTGTGTATATAAAAAAATTATGAGAGAG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160221 468 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=441342.000000 s hg38.chr21_KI270874v1_alt 25335 53 + 166743 AAAAGTAATAACTTTCAAACAGGATTAATATGAGTTATGTCTACAGAAGAAGA s panTro5.chr21 3648165 50 + 33445071 -AAAGTAAT-ACTTTCAAACAGGA-TAATATGAGTTATGTCTACAGAAGAAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276665 53 + 46275980 AAAAGTAATAACTTTCAAACAGGATTAATATGAGTTATGTCTACAGAAGAAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215719 53 - 13858734 AAAAGTAATAACTTTCAAACAGGATTAATATGATTTATGTCTACAGAAGAAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398943 53 + 32716333 AAAAGTAATAACTTTCAAACAGGATTAATATGAGTTATGTCTACAGAAGAAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155353208 51 - 185818997 AAAACTAATAACTTCCAAACAGGATTAATATG--TTATGTCTACAGAAGAAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162175910 51 - 192294377 AAAACTAATAACTTCCAAACAGGATTAATATG--TTATGTCTACAGAAGAAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653917 51 + 9440265 AAAACTAATAACTTCCAAACAGGATTAATATG--TTATGTCTACAGAAGAAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8384961 51 + 21915920 AAAACCAATAACTTCCAAACAGGATTAATATG--TTATGTCTACAGAAGAAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14961375 51 - 90373283 AAAAGTAATAACTTCCAAACAGGATTAATATG--TTATGTCTACAGAAGAAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2128715 51 + 4234846 AAAACTAATAACTTCCAAACAGGATTAATATG--TTATGTCTACAGAAGAAGA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21888580 43 + 50472720 AAAAA-----CCTTTCAAAGAGGATTGA---G--TTATGTCTACACAAGAAGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4999471 40 + 13128814 AAAAA--------TTCGAACAGGATTGA---G--TTATGTCTACACAAGAAGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9573984 46 - 14377064 AAAAAAAA--ACTTTTGAACAGGATTGA---G--TTATGTCTACACAAGAAGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8697368 46 + 9889416 AAAAAAAA--ACTTTCGAATAGGATTGA---G--TTATATCTACACAAGAAGA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19160689 53 + 47401472 AAAAGTAATAACTTTCAAGCAAGATTAATATAAATTATGTCTGTAGAAGGGGA i micMur3.chr31 I 468 I 3 s otoGar3.GL873528 20725689 53 - 38779656 AAAAGTAATAACTTTCAATCAAGATTAATATGAGTTACGCCTGGAGAagggga i otoGar3.GL873528 C 0 I 2170 s canFam3.chr31 13786916 49 + 39895921 AAAAGTAATAACTTTCAAATAGGATTAATATGAGTTATACCTGT----GAGGA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=313920.000000 s hg38.chr21_KI270874v1_alt 25388 29 + 166743 GAGGTGACTAATAAATTTTACACCTCAAT------- s panTro5.chr21 3648215 29 + 33445071 GAGGTGACTAATAAATTTTACACCTCAAT------- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276718 29 + 46275980 GAGGTGACTAATAAATTTTACACCTCAAT------- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215772 29 - 13858734 GAGGTGACAAATAAATTTTACACCTCAAT------- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4398996 29 + 32716333 GAGGCGACTAATAAATTTTACACCTCAAT------- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155353259 29 - 185818997 GAGGTGACTAATAAATTTTACATCTCAAT------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162175961 29 - 192294377 GAGGTGACTAATAAATTTTACATCTCAAT------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653968 29 + 9440265 GAGGTGACTAATAAATTTTACATCTCAAT------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8385012 29 + 21915920 GAGGTGACTAATAAATTTTACATCTCAAT------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14961426 29 - 90373283 GAGGTGACTAATAAATTTTACATCTCAAT------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2128766 29 + 4234846 GAGGTGACTAATAAATTTTACATCTCAAT------- i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21888623 29 + 50472720 GAAGTGACTAATAAATTTTACACCTCAAT------- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4999511 29 + 13128814 GAAGTGACTAATAAATTTTACACCTCAAT------- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9574030 29 - 14377064 GAAGTGACCAATAAATTTTACACCTCAAT------- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8697414 29 + 9889416 GAAGTGACTAATAAATTTTATACCTCAAT------- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19160745 28 + 47401472 GAAGTGAC-AATAAATTTTATACCTCAAT------- i micMur3.chr31 I 3 I 5873 s canFam3.chr31 13786965 36 + 39895921 GGAATGACTAATAAATTTTATGCCTCAGTGAAACAT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e otoGar3.GL873528 20725742 2170 - 38779656 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=837478.000000 s hg38.chr21_KI270874v1_alt 25417 93 + 166743 GTA--CTCTCTTATTTTAATATGAATGTGTAGTATATATGGCTTTCTCACAGGATTCTCACAACACATCTTCAATGTTCAC-TGAGGACTTCTTGC s panTro5.chr21 3648244 92 + 33445071 GTA--CTCTC-TATTTTAATATGAATGTGTAGTATA-ATGGCTTTCTTACAGGATTCTCACAACACATCTTCAATGTTCACTTGAGGACTTCTTGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276747 91 + 46275980 GTA--CTCTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTTACAGGATTCTCACAACACATCTTCAATGTTCAC-TGAGGACTTCTTGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215801 91 - 13858734 GTA--CTCTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTCACAGGATTCTCACAACACATCTTCAATGTTCAC-TGAGGACTTCTTGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4399025 91 + 32716333 GTA--CTCTGTTATTTTAATATGAATGTGTAGCAT--ATGGCTTTCTCACAGGATTCTCACAACACATCTTCAATGTTCTC-TGAGGACTTCTTGC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155353288 91 - 185818997 GTA--CTCTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTC-TGAGGACTTCTTGC i rheMac8.chr3 C 0 I 3 s macFas5.chr3 162175990 91 - 192294377 GTA--CTCTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTC-TGAGGACTTCTTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8653997 91 + 9440265 GTA--CTCTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTC-TGAGGACTTCTTGC i macNem1.NW_012019910v1 C 0 I 3 s cerAty1.NW_012002954v1 8385041 91 + 21915920 GTA--CTCTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTC-TGAGGACTTCTTGC i cerAty1.NW_012002954v1 C 0 I 3 s chlSab2.chr2 14961455 91 - 90373283 GTA--CTCTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTC-TGAGGACTTCTTGC i chlSab2.chr2 C 0 I 3 s manLeu1.NW_012102865v1 2128795 86 + 4234846 GTA--CTCTCTTATTTTAATATGAATGTG-----T--ATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCTC-TGAGGACTTCTTGC i manLeu1.NW_012102865v1 C 0 I 3 s calJac3.chr21 21888652 92 + 50472720 TTACTCTCTCTCATTTTAGTATGAATGTGTAGTAT--ATGGATTTCTCACAGGATTCTCTGAACACATTTTCAACGT-CTC-TGAGGACTTCTTGC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4999540 91 + 13128814 TTA--CTCTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAACGTCCTC-TGAGGACTACTTGC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9574059 91 - 14377064 TTA--CTCTCTTATTTTAATATGAATGTGTTGTAT--ATGGCTTTCTCACAAGATTCTCAGAACACATTTTCAATGTTCTT-TGAGGACTTCTTGC i cebCap1.NW_016107322v1 C 0 I 2 s aotNan1.NW_018487195v1 8697443 89 + 9889416 TTA----CTCTTATTTTAATATGAATGTGTAGTAT--ATGGCTTTCTCACAGGATTCTCAGAACACATTTTCAATGTTCCC-TGAGGACTTCTTGC i aotNan1.NW_018487195v1 C 0 I 2 s canFam3.chr31 13787001 91 + 39895921 GCG--CTCCCTTATTTTACTATGGATATCTAGTAT--ATGAGTTTCTCTCAAGGTTCTCAGAACACATTTCCAATAATCTC-TGAGGTCTTCTGGG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=-1627.000000 s hg38.chr21_KI270874v1_alt 25510 2 + 166743 TT- s panTro5.chr21 3648336 2 + 33445071 GT- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276838 2 + 46275980 GT- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215892 2 - 13858734 GT- i gorGor5.CYUI01015003v1 C 0 C 0 s calJac3.chr21 21888744 2 + 50472720 CT- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4999631 2 + 13128814 AT- i saiBol1.JH378168 C 0 C 0 s canFam3.chr31 13787092 2 + 39895921 -TC i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8697532 2 + 9889416 I e cebCap1.NW_016107322v1 9574150 2 - 14377064 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8385132 3 + 21915920 I e macNem1.NW_012019910v1 8654088 3 + 9440265 I e manLeu1.NW_012102865v1 2128881 3 + 4234846 I e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e rheMac8.chr3 155353379 3 - 185818997 I e nomLeu3.chr25 4399116 0 + 32716333 C a score=-1942.000000 s hg38.chr21_KI270874v1_alt 25512 5 + 166743 GTtt------t s panTro5.chr21 3648338 11 + 33445071 GTTTTTTTTAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17276840 7 + 46275980 GTTTtt----t i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215894 4 - 13858734 Gtt-------t i gorGor5.CYUI01015003v1 C 0 C 0 s canFam3.chr31 13787094 5 + 39895921 -TTTTT----- i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8697532 2 + 9889416 I e cebCap1.NW_016107322v1 9574150 2 - 14377064 I e saiBol1.JH378168 4999633 0 + 13128814 C e calJac3.chr21 21888746 0 + 50472720 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8385132 3 + 21915920 I e macNem1.NW_012019910v1 8654088 3 + 9440265 I e manLeu1.NW_012102865v1 2128881 3 + 4234846 I e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e rheMac8.chr3 155353379 3 - 185818997 I e nomLeu3.chr25 4399116 0 + 32716333 C a score=404193.000000 s hg38.chr21_KI270874v1_alt 25517 818 + 166743 tattattattattatactttaagttttacggtacatgtgcacaatgtgccagttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaactcgtcatttagcattaggtatatctcc-caatgccatccctc-------ccccctccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcctacctatgagtgagaatatgtggtgttt-ggttttttgttcttgcgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatg-aactcatcattttttatggctgcataggattccatggtgtatatgtgc-cacattttcttaatccagtctatcattgttggacatttgggttggttc-caagtctttgctattgtgaatagtgccacaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctag-ttctagatccctgaggaatcg-ccacactgacttccacaagggttg-aactagtttacagtctcaccaacagtgtaaaagtattcctatttct-ccacatcctctccagcacc-tgttgtttcctgacttttt-aatgattgccattctaactggtgtgagatggtatctcattgtgg-ttttgatttgcatttctctgatg--gccagt--tgatggtgagcattttttcatgtgttttttggctgcataaatatcttctt--ttgagaagtgtctgttcatgtcctt s panTro5.chr21 3648349 827 + 33445071 TAttattattattatactttaagttttagggtacat-tgcacaatg-acaggttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaactcgtcatttagcattaggtatatctccgcaatg-catccctccccc--tcccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattattcaattcccacctatgagtgagaatatgtggtgttt-ggttttttgttcttgcgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatgaaactcatcattttttatggctgcatagtgttccatggtgtatatgtgcgcacattttcttaatccaatctatcattgttggacatttgggttggttctcaagtctttgctattgtgaatagtgccgcaat-aacctacgtgtgcatgtgtctttatagcagcata--ttatagt-ctttgggtatatacccagtaatgggatggctgggtc-aatgctatttctagtttctagatccctgaggaatcgcccacactgac-tccacaagggttgaaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctgccacatcctctccagcaccttgttgtttcctgactttttaaatgattgccattctaactggtgtgagatggtattcaattgtggtttttgatttgcatttctc-gatggcgccagtgatgatga-gagca-tttttcatgtg-tttttggctgcataaatatcttctttgttgagaagtgtctgttcatgtcctt i panTro5.chr21 C 0 M 1537 s panPan2.chr21 17276847 825 + 46275980 tattattattattatactttaagttttagggtacatgtgcacaatgtgctggttagttacatatgtatacatgtgccatgctggtgtgctgcacccattaactcgtcatttagcattaggtatatctcc-caatgccatccctcccccctccccccaccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattattcaattcccacctatgagtgagaatatgtggtgtttaggttttttgttcttgcgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatg-aactcatcattttttatggctgcatagtgttccatggtgtatatgtgc-cacattttcttaatccaatctatcattgttggacatttgggttggttc-caagtctttgctattgtgaattgtgccgcaataaacctacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctag-ttctagatccctgaggaatcg-ccacactgacttccacaagggttg-aactagtttacagtcccaccaacagtgtaaaagtgttcctatttct-ccacatcctctccagcacc-tgttgtttcctgacttttt-aatgattgccattctaactggtgtgagatggtatctcattgtgg-ttttgatttgcatttctctgatg--gccag---tgatgatgagcattttttcatgtgttttttggctgcataaatatcttctt--ttgagaattgtctgttcatgtcctt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3215898 824 - 13858734 tttttttattattatactttaagttttagggtacatgtgcacaatatgcaggttagttacatatgtatacatgtgtcttgctggtgtgctgcacccattaactcgtcatttagcattaggtatatctcc-caatgccatccctcccccctccccccgccccacaacagtccccagagtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaatatgtggtgttt-ggttttttgttcttgcgatagtttactgagaatgatgatttccaatttcatccatgtccctacaaaggacatg-aactcatcattttttatggctacatagtattccatggtgtatatgtgc-cacattttcttaatccagtctatcattgttggacatttgggttggttc-caagtctttgctattgggaatagtgccgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatgatatttctag-ttctagatccctgaggaatcg-ccacactgacttccacaagggttg-aactagtttacagtcccaccaacagtgtaaaagtattcctatttct-ccacatcctctccagcacc-tgttgtttcctgacttttt-aatgattgccattctaactggtgtgagatggtatctcattgtgg-ttttgatttacatttctctgatg--gccaa---tgatggtgagtattttttcatgtgttttttggctgcataaatgttttctt--ttgagaattgtctgttcatgtcctt i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8697532 2 + 9889416 I e cebCap1.NW_016107322v1 9574150 2 - 14377064 I e saiBol1.JH378168 4999633 0 + 13128814 C e calJac3.chr21 21888746 0 + 50472720 C e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8385132 3 + 21915920 I e macNem1.NW_012019910v1 8654088 3 + 9440265 I e manLeu1.NW_012102865v1 2128881 3 + 4234846 I e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e rheMac8.chr3 155353379 3 - 185818997 I e nomLeu3.chr25 4399116 0 + 32716333 C a score=300.000000 s hg38.chr21_KI270874v1_alt 26335 1 + 166743 c s panPan2.chr21 17277672 1 + 46275980 c i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3216722 1 - 13858734 c i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8697532 2 + 9889416 I e cebCap1.NW_016107322v1 9574150 2 - 14377064 I e saiBol1.JH378168 4999633 0 + 13128814 C e calJac3.chr21 21888746 0 + 50472720 C e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8385132 3 + 21915920 I e macNem1.NW_012019910v1 8654088 3 + 9440265 I e manLeu1.NW_012102865v1 2128881 3 + 4234846 I e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e rheMac8.chr3 155353379 3 - 185818997 I e nomLeu3.chr25 4399116 0 + 32716333 C e panTro5.chr21 3649176 1537 + 33445071 M a score=95208.000000 s hg38.chr21_KI270874v1_alt 26336 180 + 166743 acccactttttgatt-ggttgtttgttttttttcttgtaaatacagacaagcaaatgctgagagattttgtcagcaccaggcctgccctaaaagagcgcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccaccgagGT s panTro5.chr21 3650713 180 + 33445071 ACCCACTTtttgatt-ggttgtttgttttttttcttgtAAAtaccgacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagcgcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaaggccatcgaGGT i panTro5.chr21 M 1537 C 0 s panPan2.chr21 17277673 179 + 46275980 acccactttttgatt-ggttggttg-tttttttcttgtaaatacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagcgcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaGGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3216723 181 - 13858734 gcccactttttgattgggttgtttgttttttttcttgtaaatacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagcacctgaaggaagcactaaccatggaaaggaacaaccggtaccagccactgcaaaatcatgccaaattgtaaagaccatcgaggc i gorGor5.CYUI01015003v1 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8697532 2 + 9889416 I e cebCap1.NW_016107322v1 9574150 2 - 14377064 I e saiBol1.JH378168 4999633 0 + 13128814 C e calJac3.chr21 21888746 0 + 50472720 C e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8385132 3 + 21915920 I e macNem1.NW_012019910v1 8654088 3 + 9440265 I e manLeu1.NW_012102865v1 2128881 3 + 4234846 I e chlSab2.chr2 14961546 3 - 90373283 I e macFas5.chr3 162176081 0 - 192294377 C e rheMac8.chr3 155353379 3 - 185818997 I e nomLeu3.chr25 4399116 0 + 32716333 C a score=1615.000000 s hg38.chr21_KI270874v1_alt 26516 3 + 166743 GTG s panTro5.chr21 3650893 3 + 33445071 GTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17277852 3 + 46275980 GTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3216904 3 - 13858734 AGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4399116 3 + 32716333 GTG i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162176081 3 - 192294377 GTT i macFas5.chr3 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8697532 2 + 9889416 I e cebCap1.NW_016107322v1 9574150 2 - 14377064 I e saiBol1.JH378168 4999633 0 + 13128814 C e calJac3.chr21 21888746 0 + 50472720 C e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8385132 3 + 21915920 I e macNem1.NW_012019910v1 8654088 3 + 9440265 I e manLeu1.NW_012102865v1 2128881 3 + 4234846 I e chlSab2.chr2 14961546 3 - 90373283 I e rheMac8.chr3 155353379 3 - 185818997 I a score=28665.000000 s hg38.chr21_KI270874v1_alt 26519 3 + 166743 TTT s panTro5.chr21 3650896 3 + 33445071 TTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17277855 3 + 46275980 TTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3216907 3 - 13858734 TTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4399119 3 + 32716333 TTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155353382 3 - 185818997 TTT i rheMac8.chr3 I 3 C 0 s macFas5.chr3 162176084 3 - 192294377 TTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8654091 3 + 9440265 TTT i macNem1.NW_012019910v1 I 3 C 0 s cerAty1.NW_012002954v1 8385135 3 + 21915920 TTT i cerAty1.NW_012002954v1 I 3 C 0 s chlSab2.chr2 14961549 3 - 90373283 TTT i chlSab2.chr2 I 3 C 0 s manLeu1.NW_012102865v1 2128884 3 + 4234846 TTT i manLeu1.NW_012102865v1 I 3 C 0 s calJac3.chr21 21888746 3 + 50472720 TTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 4999633 3 + 13128814 TTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9574152 3 - 14377064 TTT i cebCap1.NW_016107322v1 I 2 C 0 s aotNan1.NW_018487195v1 8697534 3 + 9889416 TTT i aotNan1.NW_018487195v1 I 2 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e canFam3.chr31 13787099 0 + 39895921 C e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=5277372.000000 s hg38.chr21_KI270874v1_alt 26522 656 + 166743 TTAATTGATGGGATAAAGTAGGTACAGAGAACGAATAAGCACATGGAATTGCAAAGGTTGCTT--TGAAGCATGCTCTATTAACTGCCTATTATATATAATTTCAAATGGAGTTGGAGGGCCATAAAATCCTATAAGCAAC-TtttaattaaatttaatctataattaattcataatttaattcatattttaatAGGACTGATTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAG-GGAAAAAATGATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGACTGTATAACATCCA-TGCAAAAGAGCTCATAAACACTAACTGCATAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGGGCGGAAAAACTTCATTTATAGGGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAACACGAGGCTATTTAAGAATGGAGAAAAAAA--------AAAAAAAAGAACTCCCTGTTAGGT-AAAAATTTT---------------------CCTTTCCTTAGGGTATT----AGAGTGGCCAGTTAATTATCTGCCCTCTTCATCAACTTTATAAAAca--ttttttgagtccttactaggacc s panTro5.chr21 3650899 654 + 33445071 TTAATTGATGGGATAAAGTAGGTACAGAGAACGAATAAGCACATGGAATTTCAAAGGTTGCTT--TGAAGCATGCTCTATTAAGTGCCTATTATATATAATTT-AAATGGAGTTGGAGGGCCATAAAATCCTATAAGCACC-TtttaattaaatttaatctataattaattcataatttaattcatattttaatAGGACTGGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAA-GGAAAAAATGATCACA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGACTGTATAACATCCA-TGCAAAAGAGTTCATAAACACTAACTGCATAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGGGTGGAAAAACTTCATTTATAGGGTCCCAGGATATTAATCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAACACGAGGCTATTTAAGAATGGAG-GAAAAA--------AAAAAAAAGAACTCCCTGTTGGGT-AAAAATTTT---------------------CCTTTCCTTAGGGTATT----AGAGTGGCCAGTTAATTATCTGCCCTCTTCATCAACTTTATAAAAca--ttttttgagtccttactaggacc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17277858 655 + 46275980 TTAATTGATGGGATAAAGTAGGTACAGAGAACGAATAAGCACATGGAATTTCAAAGGTTGCTT--TGAAGCATGCTCTATTAAGTGCCTATTATATATAATTTCAAATGGAGTTGGAGGGCCATAAAATCCTATAAGCACC-TtttaattaaatttaatctataattaattcataatttaattcatattttaatAGGACTGGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAA-GGAAAAAATGATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGACTGTATAACATCCA-TGCAAAAGAGTTCATAAACACTAACTGCATAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGGGCGGAAAAACTTCATTTATAGGGTCCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAACACGAGGCTATTTAAGAATGGAG-GAAAAA--------AAAAAAAAGAACTCCCTGTTGGGT-AAAAATTTT---------------------CCTTTCCTTAGGGTATT----AGAGTGGCCAGTTAATTATCTGCCCTCTTCATCAACTTTATAAAAca--ttttttgagtccttactaggacc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3216910 656 - 13858734 TTAGTTGATGGGATAAAGTAGGTACAGAGAATGAATAAGCACATGGAATTTCAAAGGTTGCTT--TGAAGCATGCTCTATTAAGTGCCTATTATATATAATTTCAAATGGAGTTGGAGGGCCATAAAATCCTATAAGCACG-TtttaattaaatttaatctataattaattgataatttaattCATATTTTAATAGGACTGGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAG-GGAAAAAATGATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGACTGTATAACATCCA-TGCAAAAGAGCTCATAAACACTAACTGCATAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGGGCAGAAAAACTTCATTTATAGGGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAACACGAGGCTACTTAAGAATGGAGAAAAAAA--------AAAAAAAAGAACTCCCTGTTAGGT-AAAAATTTT---------------------CCCTTCCTTAGGGTATT----AGAGTGGCCAATTAATTATCTGCCTTCTTCATCAACTTTATAAAAca--ttttttgagtccttactaggacc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4399122 653 + 32716333 TTAATTGAAGGGATAAAGTAGGTACAGAGAATGAATAAGCACATGGAATTTCAAAGGTTGCTT--TGAAGCATGCTCTATTAAGTGCCTATTATATATAATTTCAAATGGAGTTGGAGGGCCATAAAATCCTATAAGGACC-TtttaatttaatttaatccataattatttcataatttaattcatattttaatAGGACTAGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAG-GGAAAAAATGATCAGA--AGAAGGCCAAAGATAACATCCATTGTAAAGGCATTTTTGAGAAGAAGACTGTATAACATCCATTGCAAAAGAGCTCATAAAAACTAACTGTATAACTAGTGTTTAAAATAAGAGGTTTAGGGAAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATAGGGTGCTAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAGACGAGGCTATTTAAGAATGGAGAAAAAAA--------AAAAAAAA-----CTCTGTTAGGTAAAAAATTTT---------------------CCTTTCCTTAGGGTATT----AGAGTGGCCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAAca--ttttttgagtccttagtaggacc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155353385 646 - 185818997 TTAATTGATGGGATAAAGTGGGTACAGAGAACAAATAAGCACATGAAGTTTCAAAGGCTGCTT--TGAAGCATGCTCCATTAAGTGCCTATTATATGTAATTTCAAA------TGGAGGGCCATAAAATCCTATAAGCACC-TtttaatttaatttagtccataattaattcataatttaattcatattttaatAGGGGTAGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATCA-GGAAAAAA--ATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGAGTGTATAATACCCATTGCAAAAGAGCTCGTAAACACTAACTCTATAACTAGTGTTTAAAATAAGAGGTTTCGAGGAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATACAGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAACAAGGCTATTTAAGAATGGAA-----AA--------ACAAAACAAAACTCCCTGTTAGGCAAAAAATTTT---------------------CCTTTCCTTAGGGAATT----AGAGGGGTCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAACA-Tttttttgagtccttactaggacc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162176087 641 - 192294377 TTAATTGATGGGATAAAGTGGGTACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATGCTCCATTAAGTGCCTATTATATGTAATTTCAAA------TGGAGGGCCATGAAATCCTATAAGCACC-TtttaatttaatttagtccataattaattcataatttaattcatattttaatAGGGGTAGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATCA-GGAAAAAA--ATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGAGTGTATAATACCCATTGCAAAAGAGCTCGTAAACACTAACTCTATAACTAGTGTTTAAAATAAGAGGTTTCGAGGAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATACAGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAACAAGGCTATTTAAGAATGGA------------------AAAACAAAACTCCCTGTTAGGCAAAAAATTTT---------------------CCTTTCCTTAGGGAATT----AGAGGGGTCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAACA-Tttttttgagtccttactaggacc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8654094 640 + 9440265 TTAATTGATGGGATAAAGCGGGTACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATGCTCCATTAAGTGCCTATTATATGTAATTTCAAA------TGGAGGGCCATAAAATCCTATAAGCACC-TtttaatttaatttagtccataattaattcataatttaattcatattttaatAGGGGTAGTTTTAGGCTTCATATTTATAGAAAACAAT-AAAATTGTGATTAATATCA-GGAAAAAA--ATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGAGTGTATAATACCCATTGCAAAAGAGCTCGTAAACACTAACTCTATAACTAGTGTTTAAAATAAGAGGTTTCGAGGAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATACAGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATCTGAAGAAGATTGTTAAAACAAGGCTATTTAAGAATGGA------------------AAAACAAAACTCCCTGTTAGGCAAAAAATTTT---------------------CCTTTCCTTAGGGAATT----AGAGGGGCCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAACA-Tttttttgagtccttactaggacc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8385138 641 + 21915920 TTAATTGATGGGATAAAGTGGGTACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATGCTCCATTAAGTGCCTATTATATGTAATTTCAAA------TGGAGGGCCATAAAATCCTATAAGCACC-TtttaatttaatttagtccataattaattcataatttaattcatattttaatAGGGCTAGTTTTAGGCTTCATATTTATAGAAAACAATACAAATTGTGATTAATATCG-GGAAAAAA--ATCAGA--AGAAGGCCAAAGATAACGTCCATTGCAAAGGCATTTTTGAGAAGAAGAGTGTATAATACCCATTGCAAAAGAGCTCATAAACACTAACTCTATAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATACAGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAACAAGGCTATTTAAGAATGGA------------------AAAACAAAACTCCCTGTTAGGCAAAAACTTTT---------------------CCTTTCCTTAGGGAATT----AGAGGGGTCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAACA-Tttttttgagtccttactaggacc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14961552 642 - 90373283 TTAATTGATGGGATAAAGTGGGTACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATGTTCCATTAAGTGCCTATTATATATAATTTCAAA------TGGAGGGCCATAAAATCCTATAAGCACC-TTTCAATTTAATTTAGTCCATAATTAATTCATAATTTAATTTATATTTTAATAGGACTAGTTTTAGGATTCATATTTATAGAAAACAATAAAAATTGTGATTAATATAG-GGAAAAAA--A-AAGATCAGAAGGCCAAAGATAACATCCATTGCAAAAGCATTTTTGAGAAGAAGAGTGTATAATACCCATTGCAAAAGAGCTCATAAACACTAACTGTATAACTAATGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTAATTTATACAGTGCCAGGATATTACTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAATAAGGCTGTTTAAGAATGGA------------------AAAACAAAACTCCCTGTTAGGCAAAAAATTTT---------------------GCTTTTCTTAGGGTATT----AGAGGGGTCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAACA-Tttttttgagtccttactaggacc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2128887 641 + 4234846 TTAATTGATGGGATAAAGTGGGCACAGAGAACAAATAAGCACATGGAGTTTCAAAGGCTGCTT--TGAAGCATGCTCCATTAAGTGCCTATTATATGTAATTTCAAA------TGGAGGGCCATAAAATCCTATAAGCACC-TtttaatttaatttagtccataattaattcataatttaattcatattttaatAGGGCTAGTTTTAGGCTTCATATTTATAGAAAACAATAAAAATTGTGATTAATATCG-GGAAAAAA--ATCAGA--AGAAGGCCAAAGATAACATCCATTGCAAAGGCATTTTTGAGAAGAAGAGTGTATAATACCCATTGCAAAAGAGCTCATAAACACTAACTCTACAACTAGTGTTTAAAATAAGAGGTTTAGAGAAGCCAAATAAATAATTTCCAAGTAGAAGGAGCAGAAAAACTTCATTTATACAGTGCCAGGATATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATGAAGAAGATTGTTAAAACAAGGCTATTTAAGAATGAA------------------AAAACAAAACTTCCTGTTAGGCAAAAAATTTT---------------------CCTTTCCTTAGGGAATT----AGAGGGGTCAATTAATTATCTGCCCTCTTCATCAACTTTATAAAACA-Tttttttgagtccttactatgacc i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21888749 636 + 50472720 TTAATTAATGGGATAAAGTGGGTACAGAGAATAAATAAGCACATTGAGTTTCAAAGTTTGCTT--TAAAGCATGGTCTATTAAGTGCCTATTATATATAACTTCAAATGTGGTTGGATGGCCATAAAATCCTGTAAGGACC-TTTTAATTGAATTTACACCATAGATACTTCATAATTTAATTCATATTTTAATAAGACTAGTTTTAGGCTTTATATTTATAAAAAGCAATAAAAATTATGATTAGTATAG-AGAAAAAA--ACAATC--AGAAGGCCAAAGATAACATCCATGGCGATGGCATTTTTGAAAAGAAGACTGTGTAATATTCATGGCAAAAGAGCTCATAAACACTAACTGTATAACTAGTGTTTAAAATAAGTGATTTAGAGAAGCCAAATCAAGAATTTTCAAGTAGAAGTGGCAGAAAAACTTTATT---------CCAGGAGATTAGTCTGGAATCAACATGCAGAAAATCCCAGACAAGGATATAGAGAG---CTTTAAAACAAGACTGCTTTTAAATGGG----------------AAAAGAGAAATCTCCCTGTTAGGCAAAAAATTTT---------------------CCTTCCCTTAGGGTATC----AGAGTGGCCAATTAATTATCTGCCATCTTCATCAATGTTATAAAACA--TGTCTTGAGTCCTTACTAAGACC i calJac3.chr21 C 0 I 8 s saiBol1.JH378168 4999636 588 + 13128814 TTAATTGATGGGATAAAGTGGGTACAGAGAATAAATAAGCACATTGAGTTTCAAAGGTTGCTT--GGAAGCATGGTCTATTAAGTGCCTATTATATATAAATTCAAATGTGGTGGGATGGCCATAAAATCCTATAAGGACC-TTTTAATTTAATTTAAATCATAATTACTTCATAATTTAGTTCATATTTTA-------------------------------------------------ATTAGTATAG-AGAAAAAA--ACAGTC--AGAAGGTCAAAGATGACATCCATGGCAATGGCATTTTTGAGAAGAAGACTGCATAATATTCATTGCAAAAGAGCTCATAAACACTAACTGTATAACTAGTGTTTAAAATAAGTGGTTTAGAAAAGCCAAATAAAGAATTTCCAAGTAGAAGGGGCAGAAAAACTTTATTTGTAGGGTGCCAGGAGATTAATCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATAGAGAAGATTTTTAAAACAAGATCATTTTTAAATGGG----------------AAAAGAGAAATCTCCCTGTTAGGCAAAAAATTTT---------------------CCTTCCCTTAGGGTATT----CGAGTGGCCAATTAATTATCTGCCATCTTCATCAACTTTATAAAACA--TGTTTTGAGTCC----------- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9574155 636 - 14377064 TTCATTGATGGGATTAAGTGGGTACAGAGAATATATAAGCACATTGAGTTTCAAAGGTTGCTT--TGAAGCATGAT----------CCTATTATATATAACTTCAAATGTGGTTGGATGGCCATAAAATCCCATAAAGACCATTTTAATTTAATTTAAGCCATAATTATTTCATAATTTTATTCATATTTTAATAAGACTAGTCTTAGGCTTCATATTTATAAAAAGCAATAAAAATTTTGATTAGTATAG-AGAAAAAA--ACAATC-----AGGTCAAAGACGACATCCATGGTAATGGCATTTTTGAGAAGAACACTGTGTAATATTCATTGCAAAAGAGCTCATAAACACTAACTGTATAACTAGTGTTTAAAATAAGTGGTTTAGAGAAGCCAAATAAAGAAATTCCAAGTAGAAGGGGCAGAAAAACTTTATTTATAGGGTGCCAGGAGATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATAGAGAAGATCTTTAAAACAAGACCATTTTTAAATGGG----------------AAAAGAGAAATCTCCCTGTTAGGCAAAAAATTTT---------------------CCTTCCCTTAGGGTATT----AGAGTGGCCAATTAATTATCTACCATCTTCATCAACTTTATAAAACA--TGTTTTGAGTTCGTACTAAGACC i cebCap1.NW_016107322v1 C 0 I 52 s aotNan1.NW_018487195v1 8697537 647 + 9889416 TTAATTGATGGGATAAAGTGGGAACAGAGAATAAATAAGCACATTGAGTTTCAAAGTTTGCTT--TGAAGCATGGTCTATTAAGTGCCTATTATATATAACTTCAAATGTGGTTGGATGACCATAAAATCCTATAAGGACC-TtttaatttaatttagaccataattacttcataatttaattcatatttTAGTAAGACTAGTTTTAGGCTTCATATTTATAAAAAGCAATAAAAATTGTGATTAGTATAG-AGAAAAAA--ACAATC--AGAAGGTCAAAGATGACATCCATGGTAATGGCATTTTTGAGAAGACGACTGTGTAATATTCATTGCAAAAGAGCTCATAAACACCAACTGTATAACTAGTGTTTAAAATAAGTGGTTTAGAGAAGCCAAATAAAGAATTTCCAAGTAGAAGGGGCAG-AAAACTTTATTTATAGGGTGCCAGGAGATTAGTCTGGAATCAACATGTAGAAAATCCCAGACAAGGATATAGAGAAGATCTTTAAAACAAGACTATTTTTAAATGGG----------------AAAAGAGAAATCTCCCTGTTAGGCAAAAAAATTT---------------------CCTTCCTTTAGGGTATT----GGAGTGGTCAGTTAATTGTCTGCCATCTTCATCAACTTTATAAAACA--TGTTTTGAGTTCTTACTAAGACC i aotNan1.NW_018487195v1 C 0 I 52 s canFam3.chr31 13787099 581 + 39895921 TTAACTGAAAGCATAAAGTGAAGGCAGAGAAAGAACAAGTACATGGAGTTTCAAGAGTTACAGAACGATGCATGCTCTGTCAAGCGTCTATT-TTTATAGTTGTCAATGGGG-TTCAGGGACAGGAAATCTCATAAACACC-TTTTGAGTGCCCct-------------------gcttaaaccactttataatagaactagtgttaagcttcatatttataggagacattgaaaattttgatcaacatagaagaaaata--atcagg--agagagagaaatctaataactat----------------------------------gtccactgtggaagagttgataagc----------tgaatattttt-----------GTTTACAGATAACAAACAAAGCATTGCTAGGTAGCAGGGGCAGGAAAAC----TTTATACTATTCCAGGAGATTAGTCTAGAATTAACATGTAGAAAAT-----ACAAGGATCTGAATAAGATTCTGAAAATAAGGC--------AATGGAAAAAAAACTTTCTCTTAGATGGGGAAACACCCT-TCAGGTAGAGTATTTTAAAAAGTATACAACAAGTGGCCCTTCACTTGGAGAATTCTAAAAAGTGGTAAAT-------------ACCTCACCAAATTTAGAAATCATTtttgttgagtat------ggatc i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=204263.000000 s hg38.chr21_KI270874v1_alt 27178 42 + 166743 agcacttatg------ctatgataggatcacattgattgtgtcattta s panTro5.chr21 3651553 42 + 33445071 agcacttatg------ctatcataggatcacattgattgtgtcattta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17278513 42 + 46275980 agcacttatg------ctatcataggatcacattgattgtgtcattta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3217566 42 - 13858734 agcacttatg------ctatgataggatcacattgattgtgtcattta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4399775 42 + 32716333 agcacttatg------ctatgataggatcacactgattgtgtcattta i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155354031 42 - 185818997 agcacttacg------ctatgatagcatcccattgatcgtgtcattta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162176728 42 - 192294377 agcacttacg------ctatgatagcatcccattgatcgtgtcattta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8654734 42 + 9440265 agcacttacg------ctatgatagcatcccattgatcgtgtcattta i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8385779 42 + 21915920 agcacttacg------ctatgatagcatcccattgatcgtgtcattta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14962194 42 - 90373283 agcacttatg------ctatgatagcatcccattgatcgtgtcattta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2129528 42 + 4234846 agcacttacg------ctatgatagcatcccactgatcgtgtcattta i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21889393 44 + 50472720 AGCAGTCACGATTCGTCCTTACTA--ATAACAATGACTAAGTTATT-- i calJac3.chr21 I 8 C 0 s saiBol1.JH378168 5000224 28 + 13128814 ----------------CCTTACTA--ATAACAGTAACTAAGTCGTT-- i saiBol1.JH378168 C 0 C 0 s canFam3.chr31 13787680 42 + 39895921 aggaactgtg------ctatgttagcataatatagattatgtcattta i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8698184 52 + 9889416 I e cebCap1.NW_016107322v1 9574791 52 - 14377064 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=1472340.000000 s hg38.chr21_KI270874v1_alt 27220 181 + 166743 gtattaacaatagcacttgcagatcgtaactgtcattatctctccatttttcccggtgaggaaactaaagctttaagatattTCTAAATACTCAAGCTTGATAATGTATTTTtataattttat-gacaataatagcacaaa-aaaa--gtgtcaggaaatggagc--tatagtgaaacaaa----tttttt------ s panTro5.chr21 3651595 177 + 33445071 gtattaacaatagcacttgcagatcgtaactgtcgttatctctccatttttcccggtgaggaaactaaagctttaagatattTCTAAGTACTCAAGTTTGATAATGTATTTTtataattttat-gacaataatagcacaaa-aaaa--gtgtcagaaaatggagc--tatagtgaaacaaa--------tt------ i panTro5.chr21 C 0 C 0 s panPan2.chr21 17278555 175 + 46275980 gtattaacaatagcacttgcagatcgtaactgtcgttatctctccatttttcccggtgaggaaactaaagctttaagatattTCTAAGTACTCAAGTTTGATAATGTATTTTtataattttat-gacaataatagcacaaa-aaaa--gtgtcagaaaatggagc--tatagtgaaacaaa---------------- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3217608 177 - 13858734 gtattaacaatagcactcgcaggtcgtaactgtcattctctctccatttttcccagtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTAATAATGTATTTTtataattttat-gacaataatagcacaaa-aaaa--gtgtcaggaagtggagc--tatagtgaaacaat--------tt------ i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4399817 178 + 32716333 gtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaaactttaagatattTCTAAATACTCAAGTTTGATAATGTATTTTtataattttat-gacaataagagcac-aa-aaaa--gtgtcaggaaatgtagc--tacagtgaaacaaa------attt------ i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155354073 174 - 185818997 gtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaacaaa-aaa---gtgtcaggaaatggagc--tatagtgaaacaat---------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162176770 174 - 192294377 gtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaacaaa-aaa---gtgtcaggaaatggagc--tatagtgaaacaat---------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8654776 174 + 9440265 gtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaacaaa-aaa---gtgtcaggaaatggagc--tatagtgaaacaat---------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8385821 175 + 21915920 gtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaacaaa-aaag--gtgtcaggaaatggagc--tatagtgaaacaat---------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14962236 177 - 90373283 gtattaacaatagcacttgcagatcgtaactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaacaaa-aaaaaggtgtcagaaaatggagc--tatagtgaaacaat---------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2129570 175 + 4234846 gtattaacaatagcacttgcagatcataactgtcattatctctccatttttcctggtgaggaaactaaagctttaagatattTCTAAATACTCAAGTTTGAGAATATATTTTtataattttat-gacaataatagaacaaa-aaaa--gtgtcaggaaatggagc--tatagtgaaacaat---------------- i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21889437 177 + 50472720 GTTATAacaatagcactttcagatcataactgtcattacttctccatttttccaggtgaggaaactaaagttttaagatattTCTAAATACTCAAGTTTCATAatgtatttttataattttat-gataataatagcacaaa-aaag--gtgtcagagaatggagctatatagtaaaagata---------------- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5000252 185 + 13128814 GTTATAacaatagcactttcagatcataactctcattacttctccatttttccaggtgaggaaactaaagTTTTAAGATATTTCTAAATACTCAAGTTTGATAATGTATTTTtataattttat-gataataatggcacaaa-aaag--gtgtcagagaatggagctatatagtaaaacataa--ttattat------ i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9574843 187 - 14377064 GTTATAacaatagcactttcagatcataactgtcattacttctccatctttccaggtgaggaaactaaagTTTTAAGGTATTTATAAATACTCAAGTTTGATCATGTATTTTtataattttat-gataataatagcacaaa-aaag--gtgtcagagaatggagctatatagtaaaacataattttttttt------ i cebCap1.NW_016107322v1 I 52 C 0 s aotNan1.NW_018487195v1 8698236 181 + 9889416 GTTATAGcaacagcactttcagatcataactgtcattacttctccatttttccaggtgaggaaactgaagttttaagatattTCTAAATACTCAAGTTTGATAATGTATTTTtataattttat-ggtaataatagcacaaacaaag--gtgtcagagaatggagctatatagtaaaacataa-------tt------ i aotNan1.NW_018487195v1 I 52 C 0 s canFam3.chr31 13787722 153 + 39895921 gtactaacaataacaccttgggatcaaaattactgttatatct--atttttccaggtaagtaaa---------------------------tcaaggtttaaaaaATATTTTTATAATGTTTTAgataatattaacacaaa-gaag--gagccaaggaacagaac--tacattggtacaaa----------gtttct i canFam3.chr31 C 0 I 90 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=3312851.000000 s hg38.chr21_KI270874v1_alt 27401 417 + 166743 tttttt-ttttttttgagttggagtctcactctgtcacccaggctggagtgcagtggtgagatctcagctcactgcaacctctgcctaccaggtccaagcgattttcctgcctcagcctcccaagtagctgggagtacaggcgcgtgccaccacacctggccaa-ttttttgtatttttagtagagagggagtttcactgtgttacccaggatggtctcgatctcccgaccttgtgatctgcccgcctcatcctcccaaagtgctgggattataggtgtgagccatgtcgcctggcctagtgaaacaaaatttttgtacaattttgaaatgaagtttgtattaatccaaactgggtatttgaaagttataattattaaatataagctctagggcaactaataacaaaatatcttttaaa s panTro5.chr21 3651772 417 + 33445071 tttttt-ttttttttgagttggaatctcactctgtcacccaggctggagtgcaggggcgtgatctcagctcactgcaacatctgcctaccaagtccaagcgattttcctgcctcagcctcccaagtagctgggagtacaggcgcgtgccactacacctggccaa-ttttttgtatttttagtagagagggagtttcaccgtgttacccaggatggtctcgatctcccgaccttgtgatctgcccgcctcatcctcccaaagtgctgggattataggtgtgagccatgtcgcctggcctagtgaaacaaaatttttgtacaattttgaaatgaagtttgtattaatccaaactgggtatttgaaagttataattattaaatataagctctagggcaactaataacaaaatatcttttaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17278730 417 + 46275980 tttttt-ttttttttgagttggagtctcactctgtcacccaggctggagtgcaggggcgtgatctcagctcactgcaacatctgcctaccaggtccaagcgattttcctgcctcagcctcccaagtagctgggagtacaggcgcgtgccactacacctggccaa-ttttttgtatttttagtagagagggagtttcaccgtgttacccaggatggtctcgatctcccgaccttgtgatctgcccgcctcatcctcccaaagtgctgggattataggtgtgagccatgtcgcctggcctagtgaaacaaaatttttgtacaattttgaaatgaagtttgtattaatccaaactgggtatttgaaagttataattattaaatataagctctagggcaactaataacaaaatatcttttaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3217785 416 - 13858734 tttttt-ttttttttgagttggagtctcactctgtcacccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcctaccaggttcaagcgattttcctgcctcagcctcctgagtagctgggagtacaggcgcgtgccactacacctggccaa-tgttttgtatttttagtagagagggagtttcgctgtgttacccaggatggtctcgatctcccgaccttgtgatctgccc-cctcatcctcccaaagtgctgggattataggtgtgagccatgtcgcctggcctagtgaaacaaaatttttgtacaattttgaaatgaagtttgtattaatccaaagtgggtatttcaaagttataattattaaatataagctctagggcaactaataacaaaatatcttttaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4399995 417 + 32716333 tttttt-ttttttttgagttggagtctcgctctgtcacccaggctagagtgcagtggcgcgatctcagctcactgcaacctccgcctaccaggtccaagcgatttctctgcctcagcctcctgagtagctgggagtacaggcatgtgccattacacctggccaa-ttttttgtatttttagtagacagggagtttcgccatgttacccaggatggtctcgatctcctgaccttgtgatctgcccgcctcggcctcccaaagtgctgggattataggtgtgagccacgtcgcctggcctagtgaaataaaatttgtgtacaattttgaaatcaagtttgtattaatccaaactggatatttcaaagttgtaattattaaatataagctctagggcaactaataacaaaatatcttttaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155354247 415 - 185818997 --tttt-tttttcttgaggtggagtctcactctgtcacccaggctggagtgcagggacgtgatctcggctcactgccacctcttcctcccaggtccaagcgattttcctgccgcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaa-ttttttgtatttttagtagagaaggagtttcaccgtgttacccaggatggtcttgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcttagtgaaacacaatttttgtacagttttgaaatcaagtttgtattaatccaaaccgggtatttcaaagttataattattaactataatctctagggcaactaataacaaaatatcttttaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162176944 415 - 192294377 --tttt-tttttcttgaggtggagtctcactctgtcacccaggctggagtgcagggacgtgatctcggctcactgccacctcttcctcccaggtccaagcgattttcctgccgcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaa-ttttttgtatttttagtagagaaggagtttcaccgtgttacccaggatggtcttgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcttagtgaaacacaatttttgtacagttttgaaatcaagtttgtattaatccaaaccgggtatttcaaagttataattattaactataatctctagggcaactaataacaaaatatcttttaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8654950 415 + 9440265 --tttt-tttttcttgaggtggagtctcactctgtcacccaggctggagtgcagggacgtgatctcggctcactgcaacctcttcctcccaggtccaagcgattttcctgccgcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaa-ttttttgtatttttagtagagaaggagtttcaccgtgttacccaggatggtcttgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcttagtgaaacacaatttttgtacagttttgaaatcaagtttgtattaatccaaaccgggtatttccaagttataattattaactataatctctagggcaactaataacaaaatatcttttaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8385996 416 + 21915920 --ttttatttttcttgaggtggagtcttactctgtcacccaggctggagtgcagggacgtgatcttggctcactgcaacctcttcctcccaggtccaagcaattttcctgccgcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaa-ttttttgtatttttagtagagaaggagtttcgccgtgttacccaggatggtcttgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcttagtgaaacacaatttttgtacagttttgaaatcaagtttgtattaatccaaactgggtatttcaaagttataattattaactataatctctagggcaactaataacaaaatatcttttaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14962413 415 - 90373283 --tttt-tttttcttgaggtggagtctcactctgtcacccaggctggagtgcagggacgtgatctcggctcactgcaacctcttcctcccaggtccaagcgattttcctgcctcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaa-ttttttgtatttttagtggagaaggagtttcaccgtgttacccaggatggtctcgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcctagtgaaacaaaatttttgtacaattttgaaatcaagtttgtattaatccaaactgggtatttcaaagttataattatggactataatctctagggcaactaataacaaaatatcttttaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2129745 416 + 4234846 --ttttatttttcttgaggtggagtctcactctgtcacccaggctagagtgcagggacgtgatctcggctcactgcaacctcttcctcccaggtccaagcaattttcctgccgcagcctcccaagtagctgggattacaggcacgtgccactacacctggccaa-ttttttctatttttagtagagaaggagtttcaccgtgttacccaggatggtcttgatcttctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccacctcgcctggcttagtgaaacacaatttttgtacagttttgaaatcaagtttgtattaatccaaactgcgtatttcaaagttataattattaactataatctctagggcaactaataacaaaatatcttttaaa i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21889614 400 + 50472720 -ttttt-atttttttgagatggagtctccctctgtcacccaggctggagggcagtgatgcactctcggctcactacaaccttcgcctcctagattcaagctattcttc-acttcagcctcccaagtggctggaactatagacacgtgcaactacaactggtcaa-ttttttgtatttttagtagatacagggtttcaccgtgctagccagaatggtctggatctcctgacctcatgatcagcccacttcagcctcccaaagtgctgggattacaggcatgacccactgcactgagtctagtgaaactaaatttttgtacaattttga---------------aacccaaactgggtatttcaaagttgtaatgactaagtatagtctctagggcaactaataataaaagaccttttaaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5000437 402 + 13128814 tatttt-ttttttttgagatggagtctccctccgtcgcccaggctggagtgcaatgatacgatctcggctcactacaaacttcgcctcctagattcaagggattcttctgcttcagcttcccaagtagctgggactacaggcacgtgccactacacgtggtcaa-ttttttgtatttttagtagatacacggttttagcgtgttagccagaatggtctggatcttctgacctcatgatcagcccaccttggcctcccaaagtactgagattacaggcatgacccactgcaccaaatctagtgaaactaaatttttgtacaattttga---------------aatccaaactgggtatttcaaagctgtaattactaagtataatctctagggcaactaataacaaaataccttttaaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9575030 403 - 14377064 tttttt-ttttttttgagatggagtctccctctgtcacccaggctggagtgcagtgatgtgatcttggctcactacaaccttcatctcctagattcaagtgattcttctgcttcagcctcccaagtggctgggactacacacacgtgccactacatccagtcaatttttttttatttttagtagatacagggtttcaccgtgttagccagaatggtctggatcttctgacctcatgatcagcccacctcagcctcccaaagtgctgggattacaggcatgacccactgcactgagtctagtgaaactaaatttttgtacaattttga---------------aatccaaactgggaatttcaaagttgtaattactaagtataatctctagggcaactaataacaaaataccttttaaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8698417 402 + 9889416 tttttt-ttttttttgagatggagtctccctctgtcacccaggctggagtgcagtgatgcgatctcggctcactacaaccttcgcctcctagattcaagcaattcttctgcttcagcctcccaagtggctgggactacaggcacatgccactacacccagtcaa-ttttttgtatttatagtagacacagggtttcaccgtgttagccagaatggtctggatcttctgacctcatgatcggcccacctcggcctcccaaagtgctgggattacaggcatgacccactgcactgagtctagtgaaactaaatttttatacaattttga---------------aatccaaactgggtatttcaaagttgtaattactaagtataatctctagggcgactaataacaaaataccttttaaa i aotNan1.NW_018487195v1 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e canFam3.chr31 13787875 90 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=1009264.000000 s hg38.chr21_KI270874v1_alt 27818 110 + 166743 atatagtaaaagaggcaataaggaaattgaagtgatatactagaaaatgtctattttt-aaaaaataaggc---------------agcaatggaggaatcgaggaacaaaa--------aagacatgaaacac s panTro5.chr21 3652189 110 + 33445071 atatagtaaaagaggcaataaagaaattgaagtgatatactagaaaatgtctattttt-aaaaaataaggc---------------agcaatggaggaatcgaggaacaaaa--------aagacatgaaacac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17279147 110 + 46275980 atatagtaaaagaggcaataaagaaattgaagtgatatactagaaaatgtctattttt-aaaaaataaggc---------------agcaatggaggaatcgaggaacaaaa--------aagacatgaaacac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3218201 110 - 13858734 atatagtaaaagaggcaataaggaaattgaagtgatatactagaaaatgtctattttt-aaaaaataaggc---------------agcaatggaggaatcgaggaacaaaa--------aagacatgaaacac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4400412 110 + 32716333 atacagtaaaagaggcaataaggaaattagagtgatatactagaaaatgtctatttta-aaaaaataaggc---------------agtaatggaggaatcaaggaacaaaa--------aagacatgaaacac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155354662 111 - 185818997 atatagtaaaagtggcaataaggaaattaaagtgacacactagaaaatgtctattttttaaaaaatagggc---------------agaaatggaggaatcaaggaacaaaa--------aagacatgaaacac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162177359 111 - 192294377 atatagtaaaagtggcaataaggaaattaaagtgacacactagaaaatgtctattttttaaaaaatagggc---------------agaaatggaggaatcaaggaacaaaa--------aagacatgaaacac i macFas5.chr3 C 0 I 465 s macNem1.NW_012019910v1 8655365 111 + 9440265 atatagtaaaagtggcaataaggaaattaaagtgacacactagaaaatgtctattttttcaaaaatagggc---------------agaaatggaggaatcaaggaacaaaa--------aagacatgaaacac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8386412 111 + 21915920 atatagtaaaagtggcaataaggaaattaaagtgacacactagaaaatgtctatttttttaaaaatagggc---------------agaaatggaggaatcaagaaacaaaa--------aagacatgaaacac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14962828 111 - 90373283 atatagtaaaagtggcaataaggaaatttaagtgatacactagaaaatgtctatttttaaaaaaatagggc---------------agaaatggaggaatcaaggaacaaaa--------aagacatgaaacac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2130161 111 + 4234846 atatagtaaaagtggcaataaggaaattaaagtgacacactagaaaatgtctattttttaaaaaatagggc---------------agaaatggaggaatcaaggaacaaaa--------aagacatgaaacac i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21890014 110 + 50472720 atatagtaaaagaagcaacaaggaaattcaagtgatatactagataatgtctattttt-taaaaataaggc---------------agtaatagaggaattaaggaataaaa--------aatacaagaaacac i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5000839 110 + 13128814 atatagtaaaagaagcaacaaggaaattaaagtgatatactagaaaatgtctattttt-aaaaaataagtc---------------agtaatggaggaattaaggaacaaaa--------aatacatgaaacac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9575433 110 - 14377064 atatagtaaaagaagcaataaggaaattaaagtgatatactagaaaatttctattttt-aaaaaataaggc---------------agtaatggaggaattaaggaacaaaa--------aagacatgaaacac i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8698819 110 + 9889416 atatagtaaaagaagcaataaggaaattaaagtgatatactagaaaatgtctattttt-taaaaataaggc---------------agtaatggaggaattaaggaacaaaa--------aatgcatgaaacac i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13787965 133 + 39895921 atacaataaaagaagcaataagaaaattaaacttatatactagaaaatgtctttttaa-aaagaataaagcaaaaaaaaagaataaagcaatagggaaatagaggaataaaataaaacacaagacataagacgt i canFam3.chr31 I 90 I 5 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=44760.000000 s hg38.chr21_KI270874v1_alt 27928 4 + 166743 aaac s panTro5.chr21 3652299 4 + 33445071 aaac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17279257 4 + 46275980 aaac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3218311 4 - 13858734 aaac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4400522 4 + 32716333 aaac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155354773 4 - 185818997 aaac i rheMac8.chr3 C 0 I 2348 s macFas5.chr3 162177935 4 - 192294377 aaac i macFas5.chr3 I 465 C 0 s macNem1.NW_012019910v1 8655476 4 + 9440265 aaac i macNem1.NW_012019910v1 C 0 I 2348 s cerAty1.NW_012002954v1 8386523 4 + 21915920 aaac i cerAty1.NW_012002954v1 C 0 I 2347 s chlSab2.chr2 14962939 4 - 90373283 aaac i chlSab2.chr2 C 0 I 2345 s manLeu1.NW_012102865v1 2130272 4 + 4234846 aaac i manLeu1.NW_012102865v1 C 0 I 2665 s calJac3.chr21 21890124 4 + 50472720 aaac i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5000949 4 + 13128814 aaac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9575543 4 - 14377064 aaac i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8698929 4 + 9889416 aaac i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13788103 4 + 39895921 aaac i canFam3.chr31 I 5 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=1129730.000000 s hg38.chr21_KI270874v1_alt 27932 280 + 166743 caataccaacatggtgaacataaatccaacctttccagtaaaagcattaaatgcaaatggatgaaacacttcattcaaaggacagagactgacaaaacaaataaaagcaaaaatgatctaattatatactatctacaagagacacacattagattcaaagacatataaattgaaattaaaggatgaaacagtgtatatcatgcaaatagtacacaaaagagaactcaagtagctatatcaacataaatcattcacacactcttccaaaaaaa-----agatgaga s panTro5.chr21 3652303 280 + 33445071 caataccaacatggtgaacataaatccaacctttccagtaaaagcattaaatgcaaatggatgaaacacttcattcaaaggacaaagactgacaaaacaaataaaaggaaaaatgatctaattatatactatctacaagagacacacattagattcaaagacatataaattgaaattaaaggatgaaacagtgtatatcatgcaaatagtaaacaaaagggaactcaagtagctatatcaacataaatcattcacacactcttccaaaaaaa-----agatgaga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17279261 279 + 46275980 caataccaacatggtgaacataaatccaacctttccagtaaaagcattaaatgcaaatggatgaaacacttcattcaaaggacaaagactgacaaaacaaataaaaggaaaaatgatctaattatatactatctacaagagacacacattagattcaaagacatataaattgaaattaaaggatgaaacagtgtatatcatgcaaatagtaaacaaaagagaactcaagtagctatatcaacataaatcattcacacactcttcc-aaaaaa-----agatgaga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3218315 280 - 13858734 caataccaacatggtgaacataaatccaacctttccagtaaaagcattaaatgcaaatggatgaaacacttcattcaaaggacagagactgacaaaacaaataaaaggaaaaatgatctaattatatactatctacaagagacacacattagattcaaagacatataaattgaaattaaaggatgaaacagtgtatatcatgcaaatagtaaacaaaagagaactcaagtagctatatcaacataaatcattcacacactcttccaaaagaa-----agatgaga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4400526 281 + 32716333 caataccaacatggtggacataaatccaaccttttcagtaaaagcattaaatgcaaatggatgaaacacttcattcaaaggacagagattgacaaaacaaataaaaggaaaaatgatataattatatactatctacaagagacacacattagattcaaagacatacaaattgatattaaaagatgaaccagtgtatatcatgcaaagagtaaacaaaagagaactcaagtagctatatcaacataaatcattcacaaactcttccaaaaaaa----tagatgaga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162177939 285 - 192294377 caataccaacatggtgaacataaatccaaccttttcagtaaaagcattaaatgcaaatggatgaaacacttcattcaaatgacggagattaatgaaataaataaaaggaaaaataattgaattatatactatctacaagagacacacattagattcaaagatgtataaggtaaaattcaaggatgaaacagtgtatatcatgcaaatagtaaataaaagagaactaaagtagctatatcaatataaatcattcacaaactcttccaaaaaaaatagaagatgaga i macFas5.chr3 C 0 C 0 s calJac3.chr21 21890128 284 + 50472720 caataccaacatggtgaacataaatcctacttttttagtataaacattaaatgcaaatggatgaaacactttattcgaaggacagagattgacaaaacaatgaaaagggaaaatgatctaattatatgccatctacaagaggcgtacattagattcaaaaatatataaattgaaattaaaggatgaaacaatgtatatcatgcaaatagtaagcaaaagagaactcaagtagctatatcaatataaatcctccacaaattgttccaaaaaaa-tagaagatgaga i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5000953 283 + 13128814 caatataaacatggtgaacataaatcctacctttttagtaaaaacattaaatgcaaatggataaaacactttattcaaaggacagagattgacaaaacaactaaaaggaaaaatgatctaattatatgccatctacaagaggcacacattagattcaaagacatataaattgaaattaaaggatgaaacagtgtatatcatgcaaatagtatgcaaaagagaacttaggtagctatatcaatataaatcctccacaaattgctcc-aaaaaa-tagaagatgaga i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9575547 281 - 14377064 caataccaacatggtgaacataaatcctacctttttagtaaaaacattaaatgcaaatggatgaaacactttattcaaaggacagagattgacaaaacaactaaaaggaaaa---atctaattatattccatctacaagaggtacacattagattcaaagacatataaattgaaattaaaggatgaaacagtgtatatcacgcaaatagtaagcaaaagagaactcaagtagctatatcaatataaatcctccacaaattgttccaaaaaaa-tagaagatgaga i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8698933 284 + 9889416 caataccaacatggtgaacataaatcctacctttttagtaaaaacattaaatgcaaatggatgaaacactttattcaaaggacagagattggcaaaacaactaaaaggaaaaatgatctaattatatgccatccacaagaggcacacattagattcaaagacatataaattgaaattaaaggatgaagcagtgtatatcatgcaaatagtaagcaaaagagaactcaagtagctatatcaatataaatcctccacaaattgttctaaaaaaa-tagaagatgaga i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13788107 267 + 39895921 aaataccaacatggtggacataaatccaactttaccattaatgacattaaatacaaatgtaatacacactccaatcaaaagatagagtttggcaaaataaataaaaagaaaaattatccaactatatact-tctacaagag--acattttaaattcaaagacaaataaatcaaga---aataatgaacaaagacataccgtgtagacagtaaac--aagagagctggaatgaccatattaatataag------acaaaatgcttaagagaaa----aaaatgaaa i canFam3.chr31 C 0 I 5522 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e rheMac8.chr3 155354777 2348 - 185818997 I a score=2714999.000000 s hg38.chr21_KI270874v1_alt 28212 796 + 166743 aacacttcccagt-----ttatttgaccagtattaccataataccagtccaaagaaatcataacccaaaaaaataaataaaatagactgtaaaagaaaaagtgaaaccagagacaaaaatgggcatattgtaatgat-aaacaggcaagccatctggaagacaaagcaattaaaaacatgtatgcactaatgaaagcacctcaaatacatgaagca---------------------aaaaaaaaaaccagtattgaatggagaaatgaacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggcaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatatagaatattgcccaacaacggcagaatacacattctacttaaatgtgcatggaacattctctgttataaaccacatgttaggtcataatcaagcctcaataaatataaaatgattaaaatcacacaaagtgtgtttctcaaccatgatggaatgaaattagaaaccacctaccaaaataaatttgggaaattcacaaatatgtagaaattaaacaacatccttgtaaaagaagggtcaaagaagaaatctc-aggcaaattacaaatattctgagatgaatgaaaacaaaaacaaaacatcaccaaaatttacaaatgctgctaaagtagtccttagaggaaaatttacagttgtaaatgcctgtgttataaagaaaagttcttaaatcaata--acagtcttctaccataggaaaccaaaa-aaaa-- s panTro5.chr21 3652583 812 + 33445071 aacacttcccagt-----ttatttgaccagtattaccataataccagtccaaagaaatcatatcccaaaaaaataaataaaatagactgtaaaagaaaaagtgaaaccagag--aaaaatgggcttattgtaatgat-aaacaggcaagccatctggaagacaaagcaattaaaaacatgtatgcactaacgaaaggacctcaaatccatgaagcaaaaaaaaaaaaaaaaaccaacaaaaaaaaaaacagtattgaatggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggcaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatatagaatattgcccaacaacggcagaatacacattctacttaagtgtgcatggaacattctctgttatagaccacatgttaggtcataatcaagcctcaataaatataaaatgattaaaatcacacaaagtgtgtttctcaaccacgatggaatgaaattagaaaccagctaccaaaataaatttgggaaattcacaaatatgtagaaattaaacaacatccttgtaaaagaagggtcaaagaagaaatctc-aggcaaattacaaatattctgagatgaatgaaaacaa----aaaacatcaccaaaatttacaaatgctgctaaagtagtccttagaggaaaatttacagttgtaaatgcctgtgttataaagaaaagttcttaaatcaata--acagtcttctaccacaggaaaccaaaataaaa-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17279540 792 + 46275980 aacacttcccagt-----ttatttgaccagtattaccataataccagtccaaagaaatcataacccaaaaaaataaataaaatagactgtaaaagaaaaagtgaaaccagag--aaaaatgggcatattgtaatgat-aaacaggcaagccatctggaagacaaagcaattaaaaacatgtatgcactaacgaaaggacctcaaatccatgaagcaaaaa-----------------aaaaaaaaaaacagtattgaatggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggcaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatatagaatattgcccaacaacggcagaatacacattctacttaagtgtgcatggaacattctctgttatagaccacatgttaggtcataatcaagcctcaataaatataaaatgattaaaatcacacaaagtgtgtttctcaaccatgatggaatgaaattagaaaccagctaccaaaataaatttgggaaattcacaaatatgtagaaattaaacaacatccttgtaaaagaagggtcaaagaagaaatctc-aggcaaattacaaatattctgagatgaatgaaaacaa----aaaacatcaccaaaatttacaaatgctgctaaagtagtccttagaggaaaatttacagttgtaaatgcctgtgttataaagaaaagttcttaaatcaata--acagtcttctaccacaggaaaccaa---aaaa-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3218595 788 - 13858734 aacacttcccagt-----ttatttgaccagtattaccataataccagtccaaagaaatcataacccccca----aaaaaaaatagactgtaaaagaaaaagtgaaaccagagacaaaaatgggcatattgtaatgat-aaacaggcaagccatctggaagacaaagcaattaaaaacatgtatgcactaacaaaaggacctcaaatacatga-------------------------agaaaaaaaaacagtattgaatggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggcaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatatagaatattgcccaacaacggcagaatacacattctacttaagtgtgcatggaacattctctgttatagaccacatgttaggtcataatcaaacctcaataaatataaaatgattaaaatcatacaaagtgtgtttctcaaccatgatggaatgaaattagaaaccagctaccaaaataaatttgggaaattcacaaatatgtagaaattaaacaacatccttgtaaaagaagggtcaaagaaaaaatctc-aggcaaattacaaatattctgagatgaatgaaaacaaaaacaaaacatcaccaaaatttacaaatgctgctaaagcagtccttagaggaaaatttacagttgtaaatgcctgtgttataaagaaaagttcttaaatcaacaacacagtcttctaccataggaaaccaa---aaaa-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4400807 799 + 32716333 aacacttcccagt-----ttatctgaccagtattaccataacaccagtccaaagaaatcataaccccaaaaaataaataaaacagactgtaaaagaaaaagtgaaaccagagacaaaaatgggcatattgtaatgataaaacaggcaagccatcaggaagacaaagcaattaaaaacatgtatgcactaacgaaagaacctcaaatacatgaagccaa-------------------aaaaaaaaaaacagtattgaatggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggcaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatatagaatattgcccaacaatggcagaatacacattctacttaagtatgcatggaacattctctattatagaccacatgttaggtcataatcaagcctcaataaatataaaatgattaaaatcatacaaagtgtgtttctcaaccatgatgaaatgaaattagaaaccagctaccaaaataaatttgggaaatttacaaatatgtagaaattaaacaacatccttgtaaaagaagggtcaaagaagaaatctc-aggcaaattgtaaatattttgagatgaatgaaaacaaaaacaaaacatcatcaaaatttacaaatgctgctgaagcagtccttagaggaaaatttatagttgtaaatgcctgtattataaagaaaagttcttaaatcaataacacagtattctaccataggaaaccaa---agaa-- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162178224 798 - 192294377 aacacttcccagtttatcttatttgaccagtattaccataataccagtccaaagaaatcataaCCCCAAAAAAT--ataaaatagattgtaaaagaaaaagtgaaaccagagaccaaaatgggcatactgtagtgataaaacagacaagccatcaggaagacaaaacaattaaaaacatgtatgcactaacaaaaggacctcaaatacatgaag-----------------------caaaaaaacaacagtattgaatggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaatgggtagaaaaactaggaaaaatatcagccaggaaacagatgcttgaacaatactgtaaaccaactatatctaacagaaatatgtagaatattgcccaacgatggcagaatacacgttctacttaagtatgtctggaacatgctctattatagaccacatgttaggtcatagtcaagcctcaataaatataaaatgattaaaatcatacaaagtgtgtttctcaaccacaatggaatgaaatttaaaaccacctaccaaaataaatttgggaaatttacaaatatgtaaaaattaaacaacatgcttgtaaaagaagggtcaaagaataaatctc-aggcaaattataaatatttttagatgaatgaaagcaaaaacaaaacatcaccaaaatttacaaatgctgctaaagcagtccttagaggaaaatttacagttgtaaatgcctgtgttataaaggaaagttcttaaatcaaaagcacagtcttctaccataggaaaccaa---agaa-- i macFas5.chr3 C 0 C 0 s calJac3.chr21 21890412 780 + 50472720 aacacttcccagtttattttatttgaccaatatt---ataataccagtccaaagaaaccataatccaaaaaaatagataggatagactttaaaagaagaagtgaaaccagagacaaaaatgggcatattataatgatgaaacaggcaagccatcaggaaaacaaagcaagtaaaaatacatatgcactgatgaaggcacctcaaatacatgaa------------------------gcaaaaaacaatagtattgggtggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaacaggtagaaa-------------atcagccaagaaacagatgcttgaacaatactgtaaaacaactatgtctaatagaaatatatagaatatttcccaacactggcagaatacacattatacttaagtgtgcatagaacattctccattata-atcac--gttaggtcataatgaagcctcaataaatataaaatgattaaaatcacacaaagtgtgtttctcaaccatgaaagaatgaaattagaaaacagctaccaaaagaaatttgagaaatttacaaatttgtagaaatta---aacatccttgtaaaagaagggccaaagaagaaatctcaaggcaaattataaatattttgagatgagtgaaaacaaaaacaaagcatcaccaaaatttataaatgctgctaaagcagtacttagagaaaaatttatagttgtaaatgcctgtattataaaggaaagttcttaaatcaataatacagtcttccaccataggaaaccaa---aaaaag i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5001236 779 + 13128814 aacacttcccagtttattttatttgaccagtattatcataataccaatccaaagaaaccacaatccaaaaaaacagataggatagactttaaaagaaaaagtgaaaccagagacaaaaattggc-----ataatgatgaaacaggcaagccatcaggaaaacaaagcaagtaaaaatatatatgcactgacgaaggcatctcaaatacatgaa------------------------gcaaaaaacaatagtattgggtggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaacgggtagaaa-------------atcagccaagaaacagatgcttgaacaatactgcaaaagaactatgtctaacagaaatatatagaatattttccaacactggcagaatacacattatacataagtgtgcatagaacattctccattata-atcacatgttaggtcataatgaagcctcaataactataaaatgattgaaatcatacaaagtatgtttctcaaccctgaaagaatgaaattagaaatcagctaccaaaagaaatttgagaaatttgcaaatatgtagaaatta---aacatccttgtaaaagaaggaccaaagaagaaatttcaaggcaagttacaaatattttgagataaatgaaaacaaaaacaaagcatcaccaaaatttataaacgctgctaaagcagtacttagagaaaaatttatagctgtaaatgcctgtattataaaggaaagttcttaaatcagtaataccgtcttctaccataggaaaccaa---aaaaa- i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9575828 774 - 14377064 aacactacccagtttattttatttgaccagtattattataataccagtccaaagaaaccaaaatccaaaaatatagataggatagactttaa------aagtgaaatcagagacaaaaatgggcatattataatgatgaaacaggcaagccatcaggaaaacaaagcaagtaaaaatatgtatgcactgacgaaggcacctcaaatacgtgaa------------------------gcaaaaaacaatagtattgggtggagaaatggacaattcaacaaaacaatttatgactttaatacctcactttcagtaacaggtagaaa-------------atcagccaagaaacagatgctttaacaatactgtaaaacaactatgtctaatagaaatatatagaatatttcccaacactggcagaatacacattatacttcagtgtgcatagaacattctccattata-atcacatattaggtcataatgaagccttaataaatataaaatgattaaaatcatacaaaatgtgtttctcaaccatgaaa----gaaattagaaatcagctatcaaaagaaatttgagaaatttacaaatatgtagaaatta---aacatccttgtaaaagaagggccgaagaagaaatctcaaggcaaattataaatattttgagatgaatgaaaacaaaaacaaagcatcaccaaaatttataaatgctgctaaagcagtacttagagaaaaatttatagttgtaaatgcctgtattataaaggaaagttcttaaatcaataatacagtcttctaccataggaaaccaa---agaga- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8699217 774 + 9889416 aacacttcccagtttattttatttgaccagtattatcataataccagtccaaagaaaccataatccaaaaaaata-----gatagactttaaaagaaaaagtgaaaccagagacaaaaatgggcatattataatgatgaaacaggcaagccatcaggaaaacaaagcaagtaaaaatatatatgcactgacgaaggcacctcaaatacctgaa------------------------gcaaaaaacaatagtattgggtggagagacggacaattcaacaaaacaatttatgactttaatacctcactttcagtaacaggtagaaa-------------atcagtcaagaaacagatgcttgaacaatactgtaaaacaactatgtctaatagaaatatatagaatatttcccaacactggcagaatacacattatagttaagtgtgcatagaacattctccattata-atcac--gttaggtcataatgaagcctcaataaatgtaaaatgattaaaatcatacaaagtgtgtttctcaaccatgaaagaatgaaattagaaatcagctatcaaaagaaatttgagacatttacaaatatatagaaatt----aacatccttgtaaaagaagggccaaagaagaaatctcaaggcaaattataaatattttgagatgaatgaaaacaaaaacaaagcatcaccaaaatttgtaaatgctgctaaagcagtacttagagaaaaatttat---tgtaaatgcctgtattataaaggacagttcttaaatcaataatacagtcttctaccataggaaaccaa---aaaaag i aotNan1.NW_018487195v1 C 0 I 5 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e rheMac8.chr3 155354777 2348 - 185818997 I a score=-5648.000000 s hg38.chr21_KI270874v1_alt 29008 7 + 166743 tatatat- s panTro5.chr21 3653395 6 + 33445071 aata-aa- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17280332 6 + 46275980 aatt-aa- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3219383 6 - 13858734 aatt-aa- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4401606 4 + 32716333 aata---- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162179022 6 - 192294377 aata-aa- i macFas5.chr3 C 0 C 0 s calJac3.chr21 21891193 7 + 50472720 gaga-gag i calJac3.chr21 I 1 I 1 s saiBol1.JH378168 5002016 7 + 13128814 aaaa-aaa i saiBol1.JH378168 I 1 I 1 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8699991 5 + 9889416 I e cebCap1.NW_016107322v1 9576602 0 - 14377064 C e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e rheMac8.chr3 155354777 2348 - 185818997 I a score=1488315.000000 s hg38.chr21_KI270874v1_alt 29015 463 + 166743 a------aaaaagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagatgcaagcagaaacaagtaaaatagataatac-----------------------------------------------------------------aaaaaacaacttt--aaaaataaacaaaatcatatttgcttttttgaaaaagccaacgttggctgggtgtggtggctcatgcctgtaatcccaacactttggcaggcaaaagtgggtggatcacttgaggccaggagttcaagatcaacctggccaacatggtgaaaccccatctctactaaaatacaaaaattagctgggcgtggtggcacatgcctgtaatcccagctattgggaaggctaaagcaggagaatcgcttgaaccagggaggcggaggttgcagtgagccaagattgcaccactgcactccagcctgggtgatacaatgaaactctgtcttggaaaa-----------aaaaaaaaaaaaa---gaaaaagtcaacactggcaaac s panTro5.chr21 3653401 461 + 33445071 a------aaaaagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagatgcaagcagaaacaagtaaaatagataatac-----------------------------------------------------------------aaaaaacaacttt--aaaaataaacaaaatcatatttgcttttttgaaaaagccaacattggctgggtgtggtggctcacgcctgtaatcccaacactttggcaggcaaaagtgtgtggatcacttgaggccaggagttcaagatcaacctggccaacatggtgaaaccccatctctactaaaatacaaaaattagctgggcgtggtggcacatgcctgtaatcccagctatttggaaggctaaagcaggagaatcgcttgaaccagggaggcggaggttgcagtgagccaatattgcaccactgcactccagcctgggtgatacaatgaaactctgtcttg--aaa-----------aaaaaaaaaaaaa---gaaaaagtcaacactggcaaac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17280338 453 + 46275980 a------aaaaagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagatgcaagcagaaacaagtaaaatagataatac-----------------------------------------------------------------aaaaaacaacttt--aaaaataaacaaaatcatatttgcttttttgaaaaagccaacattggctgggtgtggtggctcacgcctgtaatcccaacactttggcaggcaaaagtgtgtggatcacttgaggccaggagttcaagatcaacctggccaacatggtgaaaccccatctctactaaaatacaaaaattagctgggcgtggtggcacatgcctgtaatcccagctatttggaaggctaaagcaggagaatcgcttgaaccagggaggcggaggttgcagtgagccaatattgcaccactgcactccagcctgggtgatacaatgaaactctgtcttg---------------------aaaaaaaa---gaaaaagtcaacactggcaaac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3219389 455 - 13858734 a------aaaaagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagattcaagcagaaacaagtaaaatagatagtac-----------------------------------------------------------------aaaaaacaacttt--aaaaataaacaaaatcatatttgcttttttgaaaaagccaacattcgctgggtgtggtggctcatgcctgtaatcccaacactttggcaagcaaaagtgggtggatcacttgaggccaggagttcaagatcaacctggccaacatggtgaaaccccatctctactaaaatacaaaaattagctgggcgtggtggcacatgcctgtaatcccagctatttggaaggctaaagcaggagaatcacttgaaccagggaggcggaggttgcagtgagccaagattgcaccactgcactccagcctgggtgatacaatgaaactctgtcttg-------------------aaaaaaaaaa---gaaaaagtcaacactggcaaac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4401610 452 + 32716333 a------aaaaagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagattcaagcagaaacaagtaaaatagataatac-----------------------------------------------------------------aaaaaacaacttt--aaaaataaacaaaatcatatttgcttatttgaaaaagtcaacagtggttgggtgtggtggctcatgcctgtaatcccaacattttggcaggccaaggtgggtggatcacttgaggccaggagttcaagaccaacctggccaacatggtgaaaccccatctctactaaaatacaaaaattagctgggcatggtggcatatgcctgtaatcccagctatttggaaggctaaagcaggagaattgcttgaaccagggaggaggaggttgcagtgagccaagattgcgccaccgcactccagcctgggtgatacaatgaaactctgtcttg---------------------aaaaaaaa---aaaaaagtcaaca-tgacaaac i nomLeu3.chr25 C 0 I 304 s macFas5.chr3 162179028 452 - 192294377 aagagagagagagaggaaactaaaaccaaagcaagcagaatgaaggaaataataaagattcaagcataaacaagtaaaatagataatac-----------------------------------------------------------------aaaaaacaacttt--aaaaataaacaaaatcatatttgcttatttgaaaaagtcagcattgtctggctgtggtggctcctgcctgtaatctcaacactttggcaggccaagataggtggatcacttgaggccaggagtttgagaccaaactggccaatata---------catctctactaaaatacaaaaattagctgggcgtggtggcacgtgcctataatcccagctatttggaaggctgaagcaggagaatcgcttgaaccagggaggtggaagttgcagtgagccaagattgcaccactgcactccagcctgggtgacacaatgaaactctgtcctg-------------------taaaaataaa---ggaaaagtcaacaatggcaaac i macFas5.chr3 C 0 C 0 s calJac3.chr21 21891201 472 + 50472720 ------gaaaaagagtatactaaaaccaaaacaagcag-aggaaggaaataataaagattggagcagaagcaagtaaaatagataatac--------------------------------------------------------------aaaaaaagaaaacttt--aaaaataaacaaaaccatatttgcttctttgaaaaatgcaacattaggcaggcacagtggctcacacctgtgatcccagcacgttggcaggtcaaggtg---ggatcacttgaggccaggagttcaagaccagcctggccaacacggttaaaccccttctctactaaaatacaaaaattagcctggcatggtggcacctacctataaacctagctatttggaaagctaaggcaggagactcacttgaacctgggaggcggaggttgcagtgagctgggatcaccccactgcactccagcctgagtgacagaatgagactctgtcttgaaaaaaaaaaaaga-gaaagaaagaaaga---gaaaaagtcaacactggcaaac i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5002024 469 + 13128814 ------tagacagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagactggagcagaagcaagtaaaatagataatacaa---------------------------------------------------------aaaaaaaaaaaaaaacttt--aaaaataaacaaaaccatatttgcttatttgaaaaatacaacattgggcaagcacagtggctcatgcctgtgatcccggcactttggcaggccaaggtg---ggatcacttgaggccaagagttcaagaccagcctggccaccatggttaaaccccttctcta-taaaatacaaaaattagactggcatggtggcacttacctgtaaacctagctattcaggaagctaaggaaagagaattgcttgaacctgggaggcagaggttgcagtgagctgagatcaccccactgcactccagcctgagtgacagaatgagtctctgtcttgagaaaaa---------aaagaaagaaaga---gaaaaagtcaacactggctaac i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9576602 536 - 14377064 ------gagagagagtaaactaaaaccaaagcaagcagaaggaaggaaataataaagattggagcagaagcaagtaaaatagataatacaaaaaaaaaaaaaaanaaataataaagattggagcagaagcaagtaaaatagataatacaaaaaaaaaaaaaaacttttaaaaaataaacaaaaccatatttgtttatttgaaaaatacaacattgggcaggcacggtggctcacacctgtgatcccagcactttggcaggccaagatg---ggatcacttgaggccaggagttcaagcccagcctggccaacatggttaaactccttctctactaaaatacaaaaattagcctggcatggtggcacttacctgtaaacctagctattcgggaagctaaggcagaagaatcgcttgaacctcggaggcaaaggttgcaatgagctgatatcatcccactgcactctagcctgagtgacagaatgagactctgtgttgaaaaaaaaaaaaaa--agaaaaagaaaga---gaaaaagtcaacactggcaaac i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8699996 476 + 9889416 ------gagagagagtaaactaaaaccaaagcaagtggaaggaaggaaataataaagattggagcagaagcaggtaaaatagataatac---------------------------------------------------------------aaaaaaaaaaacttt--aaaaataaacaaaaccatatttgcttatttgaaaactataacattgggcaggcacggtggctcacgactgtgatcccagcactttggcaggccaaggtg---ggatcacttgaggccaggagttcaagaccagcctggccaacatggttaaaccctttctctactaaaatacaaaaattagcctggcatggtggcacttacctgtaaacctagctatttgggaagctaaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagctgagatcaccccattgcactccagcctgagttagagaatgagactctgtcttgaaaaaaaaaaagaaagaaagaaagaaagagaggaaaaagtcaacactggcaaac i aotNan1.NW_018487195v1 I 5 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e rheMac8.chr3 155354777 2348 - 185818997 I a score=510321.000000 s hg38.chr21_KI270874v1_alt 29478 194 + 166743 ctttagctagagtgaccatgag--------aaaaatagaagattcaagttattaaaatcaggagtg-aaaaagggacttc--------actgccaaacttatagaacttttatttttaaagattataagagaatgatttgaacaattgtaagctaaaaaaaatttgataacctagacgaaatggacaaatttctgaaaagatgcaaa---------------------------------------------------attg s panTro5.chr21 3653862 194 + 33445071 ctttagctatagtgaccatgag--------aaaaatagaagattcaagttattaaaatcaggagtg-aaaaagggacttc--------actgccaaacttatagaacttttatttttaaagattatacgagaatgatttgaacaattgtaagctaaaaaaaatttgataacctagacgaaatggacaaatttctgaaaagatgcaaa---------------------------------------------------attg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17280791 194 + 46275980 ctttagctagagtgaccatgag--------aaaaatagaagattcaagttattaaaatcaggagtg-aaaaagggacttc--------actgccaaacttatagaacttttatttttaaagattatacgagaatgatttgaacaatggtaagctaaaaaaaatttgataacctagacgaaatggacaaatttctgaaaagatgcaaa---------------------------------------------------attg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3219844 194 - 13858734 ctttagctagagtgaccatgag--------aaaaatagaagattcaagttattaaaatcaggagtg-aaaaagggacttt--------actgccaaacttatagaacttttatttttaaagattataagagaatgatttgaacaattgtaagctaaaaaaaatttgataacctagacgaaatggacaaatttctgaaaagatgcaaa---------------------------------------------------attg i gorGor5.CYUI01015003v1 C 0 C 0 s macFas5.chr3 162179480 243 - 192294377 ctttagctagagtgacaatgag--------aaaaatagaagattcaagttattaaaatcaggagtgaaaaaagggacatc--------actgccaaacttatagaactttcattttgaaagattataagaaaatgatttgaacaattgtatgc---aaaaattttgacaacctagatgaaatggacaaatttctgaaaagatgcaaaactgattctaaaagaaacagaaatctgagtagatctataataattagaaatattg i macFas5.chr3 C 0 I 17 s calJac3.chr21 21891673 205 + 50472720 ctttagctagattgacaatgag-----gaaaaaaaatgaagattcaaattattaaaatcaaaagtg-aaaaagggacatctttttatttttgacaaacttacagaacttttattttgaaagaatataagagaatgatttgaacaatcgtatgcaaaaaaaaattggataacctagatgaaatggacaaactcctgaaaagatgcaaa---------------------------------------------------actg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5002493 202 + 13128814 ctttagctagatcgaccatgagaaaaaaaaaaaaaaaaaagattcaaattcttaaaatcaaaagtg-aaaaagggacatc--------actgacaaacttacagaacttttattttgaaagaatataagagaattatttgaacaattgtatgctaaaaaaaattggataacctagatgaaatggacaaacttctgaaaagatgcaaa---------------------------------------------------actg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9577138 196 - 14377064 ctttagctagattgaccatgag------cgaaaaaaagaagattcaaattattaaaatcaaaagtgaaaaaagggacatc--------actgacaaacttacagaacttttattttgaaagaatataagagaatgatttgaacaatcgtatgct-aaaaaaattgaataacctagacaaaatggacaaaatcctgaaaagatgcaaa---------------------------------------------------actg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8700472 195 + 9889416 ttttagctagattgaccatgag-------gaaaaaaagaagattcaaattattaaaatcaaaagtgaaaaaagggacatt--------actgacaaacttacagaacttttattttgaaagaatataagagaatgatttgaacaatcatacgct-aaaaaaattggataacctagatgaaatggacaaactcctgaaaagatgcaaa---------------------------------------------------actg i aotNan1.NW_018487195v1 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e rheMac8.chr3 155354777 2348 - 185818997 I e nomLeu3.chr25 4402062 304 + 32716333 I a score=44283.000000 s hg38.chr21_KI270874v1_alt 29672 13 + 166743 attctaaaagaaa s panTro5.chr21 3654056 13 + 33445071 attctaaaagaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17280985 13 + 46275980 attctaaaagaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3220038 13 - 13858734 attctaaaagaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4402366 13 + 32716333 attttaaaatgaa i nomLeu3.chr25 I 304 C 0 s macFas5.chr3 162179740 13 - 192294377 attccataagaaa i macFas5.chr3 I 17 I 66 s calJac3.chr21 21891878 13 + 50472720 attctaaaagaaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5002695 13 + 13128814 attctgaaagaaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9577334 13 - 14377064 attctgaaagaaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8700667 13 + 9889416 attctgaaagaaa i aotNan1.NW_018487195v1 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e rheMac8.chr3 155354777 2348 - 185818997 I a score=22065.000000 s hg38.chr21_KI270874v1_alt 29685 12 + 166743 cagaaatctgag s panTro5.chr21 3654069 12 + 33445071 cagaaatctgag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17280998 12 + 46275980 cagaaatctgag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3220051 12 - 13858734 cagaaatctgag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4402379 8 + 32716333 ttaacatc---- i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21891891 12 + 50472720 gaaaaatctgag i calJac3.chr21 C 0 I 10705 s saiBol1.JH378168 5002708 12 + 13128814 caaaaatctgaa i saiBol1.JH378168 C 0 I 37 s cebCap1.NW_016107322v1 9577347 12 - 14377064 gaaaaatctgag i cebCap1.NW_016107322v1 C 0 I 9436 s aotNan1.NW_018487195v1 8700680 12 + 9889416 gaaaaatctgag i aotNan1.NW_018487195v1 C 0 I 22431 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e macFas5.chr3 162179753 66 - 192294377 I e rheMac8.chr3 155354777 2348 - 185818997 I a score=4693.000000 s hg38.chr21_KI270874v1_alt 29697 5 + 166743 tagat s panTro5.chr21 3654081 5 + 33445071 tagat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17281010 5 + 46275980 tagat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3220063 5 - 13858734 tagat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4402387 3 + 32716333 --aat i nomLeu3.chr25 C 0 C 0 s saiBol1.JH378168 5002757 5 + 13128814 taaat i saiBol1.JH378168 I 37 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e macFas5.chr3 162179753 66 - 192294377 I e rheMac8.chr3 155354777 2348 - 185818997 I a score=885.000000 s hg38.chr21_KI270874v1_alt 29702 2 + 166743 ct s panTro5.chr21 3654086 2 + 33445071 ct i panTro5.chr21 C 0 I 118 s panPan2.chr21 17281015 2 + 46275980 ct i panPan2.chr21 C 0 I 118 s gorGor5.CYUI01015003v1 3220068 2 - 13858734 ct i gorGor5.CYUI01015003v1 C 0 I 116 s nomLeu3.chr25 4402390 2 + 32716333 ct i nomLeu3.chr25 C 0 I 1 s macFas5.chr3 162179819 2 - 192294377 ct i macFas5.chr3 I 66 C 0 s saiBol1.JH378168 5002762 1 + 13128814 c- i saiBol1.JH378168 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e rheMac8.chr3 155354777 2348 - 185818997 I a score=67.000000 s hg38.chr21_KI270874v1_alt 29704 1 + 166743 c s nomLeu3.chr25 4402393 1 + 32716333 t i nomLeu3.chr25 I 1 C 0 s macFas5.chr3 162179821 1 - 192294377 t i macFas5.chr3 C 0 C 0 s saiBol1.JH378168 5002763 1 + 13128814 c i saiBol1.JH378168 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8386527 2347 + 21915920 I e macNem1.NW_012019910v1 8655480 2348 + 9440265 I e manLeu1.NW_012102865v1 2130276 2665 + 4234846 I e chlSab2.chr2 14962943 2345 - 90373283 I e rheMac8.chr3 155354777 2348 - 185818997 I e gorGor5.CYUI01015003v1 3220070 116 - 13858734 I e panPan2.chr21 17281017 118 + 46275980 I e panTro5.chr21 3654088 118 + 33445071 I a score=10977466.000000 s hg38.chr21_KI270874v1_alt 29705 2017 + 166743 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-----agatgagaaaacacttcccattttattttatttgaccagtattaccataatactaaaccaaagaaatcacaacaacaaagaaacccacagaccaatgtttcttatgaacattaatgcaaaatcttcaaatgccagcaaaccaaagtgacacttaaaaaaagttatataccatgactaactgggatttagctcaacggtacaaatttgccctaatatatgaaaatcaactaatgtgatacaccgtattaacacgatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataatgtaacattgctttgtgat---------------------------------aaaaacactcattaaactagaaacagaaggaaactttttcaactgcataaaggccatctacaaaataacaacagctaaaattatatctaattgtgaaagattgaatgctttccttctaaaatcaagaaatagaaataaaatcatccctattcaggatcttgcatttagaaaatgctaagaaattgacgcaaaaaattattaaaactagtaagtatagcaaagttgcagaatacaagctcaatatacaaagattaattgtacttttgtacatcactaatatataatctgaataagaaattaa-gaaaacaattatatttacaaaagtatcagaataaaataggaataaatttaacaaaaaacatggatcatttgtacaccagaaactatacaacataactgag-aaaacatatggaagacaggaggcaggactcacttgtagctcccactcagattaacagaaccacatgtggagactcacattatgaacttttgctccaagacatactgcaggaacatactgggaaaacaaacaaacaaac--------aaaagattacagaccttttgaaagaagcagcttcctgctgcaaattctgtgatgtgagacagttgaaaaactcagcg-cccaaagtgtgagagggagaaagcccacatctgaacacagattctccctggggaacctgaaaatcaagatcacaggagaaagacttaaccttacctaaagctgaaacaaatttagagagccaagtgaaatataaaagcagaagaagcagtgagaagagctggtccaacaggactcttggtccccagggaagctatttctgacttcatctcacagggttcctttgggaggactgccagtagacctggggaaggaccacaggaagcagaaaacttcccggtgaactctttaataattttgaactagcacgaaatttccagggcagaattggtgggg-ggtgggggcggtgaatgtgaagagcaggtacaagcacaaaagacatggcaggcagggatggaaaaggcctgaaagcccagcttgctttctcagtggggaggtttgtagtctgggacaataactcagccctgctcactggccgtctggatgtaaactcggtgctgttgttggggcatggtgaaagtgagcttttctggctacataagagctgggagaggcagatcactgctggcattcccccacttctctggtgacctgtatgatgcagcagaggaagccataatctcccCATATTACCTCTCT----gaagaaagaacttaagagctcaaagacaaagcattcaaattaacctaatccaacaaagacaaagaaaa-aaagtttgaaaaacatgaacaaagcctccaagaagtttgggattatgttaaacaaccaaaccta--aataattggtgctcatgagaaagatgataaatctaaaaatttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctagacatacaagtacaagaagctcaaagaacacctggggaattcatcacaaagagatctttacctaggtacatagtcatcaggtaatctaaagtcaaaacaaaagaaacaatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tcagacaaacaacaga-ttttt s panTro5.chr21 3654206 2022 + 33445071 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-tagaagatgagaaaacacttcccattttattttatttgaccagtattaccataatactaaaccaaagaaatcacaacaacaaagaaacccacagaccaatgtttcttatgaacattaatgcaaaatcttcaaatgccagcaaaccaaagtgacgcttaaaaaaagttatataccatgactaactgggatttagctcaacggtacaaatttgccctaatatatgaaaatcaactaatgtgatacaccgtattaacacaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacgtaacattgcttcgtgat---------------------------------aaaaacactcattaaactagaaacagaaggaaactttttcaactgcataaaggccatctacaaaataacaacagctaaaattatatctaattgtgaaagattgaatgctttccttctaaaatcaagaaatagaaataaaatcatccctattcaggttcttgcatttagaaaatgctaagaaattgacgcaaaaaattattaaaactagtaagtatagcaaagttgcagaatacaagctcaatacacaaagattaattgtatttttgtacattactaatatataatctgaataagaaattaa-gaaaacaattatatttacaaaagtatcggaataaaataggaataaatttaacaaaaaacatggatcatttgtacaccagaaactatacaacataactgag-aaaacatatggaagacaggaggcaggactcacttgtagctcccactcagattaacagaaccacatgtggagactcacattatgaacttttgctccaagacatactgcaggaacatactgggaaaacaaacaaacaaac--------aaaagattacagaccctttgaaagaagcagcttcctgctgcaaattctgtgatgtgagacagttgaaaaactcagcg-cccaaagtgtgagagggagaaagcccacatctgaacacagattctccctggggaacctgaaaatcaagatcacaggagaaagacttaaccttacctaaagctgaaacaaatttagagagccaagtgaaatataaaagcagaagaagcagtgagaagagctggtccaacaggactcttggtccccagggaagctatttctgacttcatctcacggggttcctttgggaggactgccagtagacctggggaaggaccacaggaagcagaaaacttcccggtgaactctttaataattttgaactagcacgaaatttccagggcagaattggtggggaggtgggggcggtgaatgcgaagagcaggtacaagcacaaaagacatggcaggcagggatggaaaaggcctgaaagcccagcttgctttctcagtggggaggtttgtagtctgggacaataactcagccctgctcactgaccgtctggatgtaaactcgttgctgttgttggggcatggtgaaagtgagcttttctggctacataagagctgggagaggcagatcactgctggcattcccccacttctctggtgacctgtatgatgcagcagaggaagccataatctcccCATATTCCCTCTCT----gaagaaagaacttaagagctcaaagacaaagcattcaaattaacctaatccaacaaagacaaagaaaa-aaagtttgaaaaacatgaacaaagcctccaagaagtttgggattatgttaaacaaccaaaccta--aataattggtgctcatgagaaagatgataaatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctagacatacaagtacaagaagctcaaagaacacctggggaattcatcacaaagagatctttacctaggtacatagtcatcaggtaatctaaagtcaaaacaaaagaaacaatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tcagacaaaaaacaga-ttttt i panTro5.chr21 I 118 C 0 s panPan2.chr21 17281135 2021 + 46275980 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaat--agaagatgagaaaacacttcccattttattttatttgaccagtattaccataatactaaaccaaagaaatcacaacaacaaagaaacccacagaccaatgtttcttatgaacattaatgcaaaatcttcaaatgccagcaaaccaaagtgacgcttaaaaaaagttatataccatgactaactgggatttagctcaacggtacaaatttgccctaatatatgaaaatcaactaatgtgatacaccgtattaacacaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacgtaacattgcttcgtgat---------------------------------aaaaacactcattaaactagaaacagaaggaaactttttcaactgcataaaggccatctacaaaataacaacagctaaaattatatctaattgtgaaagattgaatgctttccttctaaaatcaagaaatagaaataaaatcatccctattcaggatcttgcatttagaaaatgctaagaaattgacacaaaaaattattaaaactagtaagtatagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaatatataatctgaataagaaattaa-gaaaacaattatatttacaaaagtatcggaataaaataggaataaatttaacaaaaaatatggatcatttgtacaccagaaactatacaacataactgag-aaaacatatggaagacaggaggcaggactcacttgtagctcccactcagattaacagaaccacatgtggagactcacattatgaacttttgctccaagacatactgcaggaacatactgggaaaacaaacaaacaaac--------aaaagattacagaccctttgaaagaagcagcttcctgctgcaaattctgtgatgtgagacagttgaaaaactcagcg-cccaaagtgtgagagggagaaagcccacatctgaacacagattctccctggggaacctgaaaatcaagatcacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagccaagtgaaatataaaagcagaagaagcagtgagaagagctggtccaacaggactcttggtccccagggaagctatttctgacttcatctcacggggttcctttgggaggactgccagcagacctggggaaggaccacaggaagcagaaaacttcccggtgaactctttaataattttgaactagcacgaaatttccagggcagaattggtgggggggtgggggcggtgaatgcgaagagcaggtacaagcacaaaagacatggcaggcagggatggaaaaagcctgaaagcccagcttgctttctcagtggggaggtttgtagtctgggacaataactcagccctgctcactgaccgtctggatgtaaactcggtgctgttgttggggcatggtgaaagtgagcttttctggctacataagagctgggagaggcagatcactgctggcattcccccacttctctggtgacctgtatgatgcagcagaggaagccataatctcccCATATTCCCTCTCT----gaagaaagaacttaagagctcaaagacaaagcattcaaattaacctaatccaacaaagacaaagaaaa-aaagtttgaaaaacatgaacaaagcctccaagaagtttgggattatgttaaacaaccaaaccta--aataattggtgctcatgagaaagatgataaatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttcccaggcctttctagagatctagacatacaagtacaagaagctcaaagaacacctggggaattcatcacaaagagatctttacctaggtacatagtcatcaggtaatctaaagtcaaaacaaaagaaacaatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tcagacaaaaaacaga-ttttt i panPan2.chr21 I 118 C 0 s gorGor5.CYUI01015003v1 3220186 2022 - 13858734 cac-------------------------------------------------------------------------------aaactctttcaaaaaaaaaatagaagatgagaaaacacttcccattttattttatttgaccagtattaccataatactaaaccaaagaaatcacaacaacaaagaaacccacagaccaatgtttcttatgaacattaatgcaaaatcttcaaatgccagcaaaccaaagtgacacttaaaaaaagttatataccatgactaactgggatttagcttaacggtacaaatttggcttaatatatgaaaatcaactaatgtgatacaccatattaacacgatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacgtaacattgcttcgtgat---------------------------------aaaaacactcattaaactagaaacagaaggaaactttttcaactgcataaaggccatctacaaaataacaacagctaaaattatatctaattgtgaaagattggatgctttccttctaaaatcaagaaatagaaataaaatcatccctattcaggatcttgtatttagaaaatgctaagaaattgacacaaaaaattattaaaactagtaagtatagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaatatataatctgaataagaaattaa-gaaaacaattatatttacaaaagtatcagaataaaataggaataaatttaacaaaaaacatggatcacttgtacaccagaaactatacaacataactgag-aaaacatatggaagacaggaggcaggactcacttgtagctcccactcagattaacagaaccacatgtggagactcacattatgaacttttgctccaagacatactgcaggaacatactgggaaaacaaacaaacaaac--------aaaagattacagaccctttgaaagaggcagcttcctgctgcaaattctgtgatgtgagacagttgaaaaactcagtg-cccgaagtgtgagagggagaaagcccacatctgaacacagattctccctggggaacctgaaaatcaagatcacaggagaaagacttaaccttacctaaagctgaaacaaatttagagagccaagtcaaatataaaagcagaagaagcagtgagaagagctggtccaactggactcttggtccccagggaagctaattctgacttcatctcacagggttcctttgggaggactgccagtagacctggggaaggaccacaggaagcagaaaacttccaggtgaactctttaataattttgaactagcacgaaatttccagggcagaattggtgggggggtgggggcggtgaatgcgaagagcaggtacaagcacagaagacatggcaggcagggatggaaaaggcctgaaggcccagcttgctttctcagtggggaggtttgtagtctggggcaataactcagccctgctcactggccgtctggatgtaaactcggtgctgttgttggggcatggtgaaagtgagcctttctggctacataagagctgggagaggcagatcactgctggcattcccccacttctctggtgacctgtatgatgcagcaggggaagccataatctcccCATATTCCCTCTCT----gaagaaagaacttaagagctcaaagacaaagcattcaaattaacctaatccaacaaagacaaagaaaa-aaaa-gtgaaaaacatgaacaaagcctccaagaagtttgggattatgttaaacaaccaaaccta--aataattggtgttcatgagaaagatgataaatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctagacatacaagtacaagaatctcaaagaacacctggggaattcatcacaaagagatctttacctaggtacataatcatcaggtaatctaaagtcaaaacaaaagaaacaatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tcagacaaacagcaga-tgttt i gorGor5.CYUI01015003v1 I 116 C 0 s nomLeu3.chr25 4402394 2006 + 32716333 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-tagaagatgagaaaacacttcccattttattttatttgaccagtattaccataataccaaaccaaagaaatcacaaaaacaaagaaacccacagaccaatgtttcttatgaacattaatgcaaaatcttcaaatgccagcaaaccaaagtgacacttacaaaaagttacataacatgactaactggaatttatctcaacagtacaaatttggcttaataaatgaaaatcaactaatgtgatacaccatactaacacgatcaaaacaaaaagcacgtgatcatttct----ataaagtaaaatcctctgacataacctaacattgcttcatgat---------------------------------aaaaacactcattaaactagaaacagaaggaaactttttcaactgcataaaggccatctgcaaaacaacaacagctaaaattatgtctaattgtgaaagattgaatgctttcgttctaaaatcaagaaatagaaa-aaaatcattcctattcaggatcttgtatttagaaaatactaagaaattgacac-aaaaattattaaaacaaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattacgaacatataatctgaataagaaattaa-ggaaacaattatatttacaaaagtatcagaataaaataggaataaatttaacaaaaaacatggatcacttgtacaccagaaactataaaacataactgag-acaacatatggaagacaggaggcaggactcacttgcagctcccactcagattaacagaacaacatgtggacactcacattatgaacttttgctccaagacctactgcaggaacatactggga----aaacaaacaaac--------aaaaaattacagaccctttgaaagaagaatcttcctgctgcaaattc-----tgtgagacagttgaaaaactgagtg-cccaaagtgtgagacggagaaagtccatatctgaacacaaattctccctggggaacctgaaaaacaagatcacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagccaagtgaaatataaaagtagaagaagcagtgggaagagctggtccagcaggactcctggtccccagggaagctatttctgacttcatctcacaggggtcctttgggaggactgccagtagaattggggaaggaccacaggatgaagaaaacttccggatgaactttttaataattttgacctggcacaaaatttctggggcagaattggtgggg-ggtggggacggtgcatgcaaagagcaggtacaagcacagaagacatggcaggcagggatggaaaaggcctgaaagcctggcttgctttctcagtggggaggtttgtagcctggggcaataactcagccctgctcactggctgtctggatgtaaactcagtgctgttggtggggcatggtgaaagtgagtctttctggctacataagagctgggagaggcaggccactgctggcattcccccacttccctggtgacctgtacgatgcagcagaggaagccataatctcccCATATTCCCTCTCT----gaagaaagaacttaagagctcaaagacaaagcattcaaattaacctaatccaacaaagacaaagaaaa-aaagtttgaaaaacatgaacaaagcctccaagaagtttgggattatgttaaacaaccaaaccta--aataattggtgttcatgagaaacatgataaatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctaaacatacaagtacaagaagctcaaagaacacccagatgattcatcacaaaaagatctttacctaggcacatagtcatcaggtaatctaaagtcaaaacgaaagaaacaatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tcagacaaacagcaga-ttttt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155357125 2019 - 185818997 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-tagaagatgagaaaacacttcccattttattttatttgaccagtattaccataataccaaaccaaagaaatcataacaacaaagaaacccacaaaccaatgtttcttatgtatattaatgcaaaatcttcaaatgtcagcaaaccaaagtgacactttaaaaaaattatataccatgactaactgggatttatctcaatagtacaaatttgacttgatatatgaaaatcagctaatgtgatacaccatattagcgcaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacccaacactgcttcacgat---------------------------------aaaaacactcatcaaactagaaacagaaggaaactttttcaactacgtaaaggccatctgcaaaataacagcagctaaaattatatctaattgtgaaaaattgaatgctttccttctaaaatca-gaaatagaaataaaatcatccctattcatgatcttctatttagaaaatactaagaaattgacacaaaaaa-tgttaaaactaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaacatataatccaaataagaaattaa-gaaaacaattatatttacaaaagcatcagaataaaatagaaataaatttaacaaaaaacatggatcacttgtacactggaaactataaaacataattgagaaaaaaatatggaagataggaggcaagactcacttgcagctcctactcagattaacagaacaagatgtggagactcacattatgaacttttgctccaagacatattgcaggaacatactgggaaaacaaacaaacaaaca-------aaaaaattacagactttttgaaagaaggagcttcctgctgcaaattc-----tgtgagatagtt-aaaaactgactg-cccaaagtttgagagggagaaagtccgcatctgaatacagattctccctggggaacctgaaaatcaagattacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagccaagtgaagtataaaagtaaaagaagcagtgagaagagctggtccagcaggactcctggtccccagggaagccatttctgacttcatctcacaggggtcctttgagaggactgccagcagaattgtagaaggaccaaaggaacaagaaaacttccaggtgaactttttaataattttgacctaacgtgaaatttccggggcagaatcggttggggagtgggggcggtgaatgcgaagagcaggtgcaagcacagaacacatggcaggcagggatggaaaaggcctgaaagcccggcttgctttctcagggggaaggtttgtagcctgggtcaagaactccaccctgctcactggctgtctgggtgtaaacttagtgctgttggtggggcatggtgaaagtgagcctttctggctacataagagctgggagaggcaggtca-tgttggcattcccctacttccctggtgacctgtatgatgcagcagaggaagtcataatctcccCAGATTCCCTCTCT----gaagaaagaacttaagaacttaaaaacaaagcattcaaattaacctaatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagactccacgaagttttggattatgttaagcaaccaaacctaagaataattggtgttcatgagaaagatgatacatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctagcctttctagagatctagacatacaagtacaagaagctcaaagaacacccgaggaattcatcacaaaaagatctttacctaggcacatggccatcaggtaatctaaagtcaaaacaaaagaaacgatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tgagacaaacagcagatttttt i rheMac8.chr3 I 2348 C 0 s macFas5.chr3 162179822 2020 - 192294377 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-tagaagatgagaaaacacttcccattttattttatttgaccagtattaccataataccaaaccaaagaaatcataacaacaaagaaacccacaaaccaatgtttcttatgtatattaatgcaaaatcttcaaatgtcagcaaaccaaagtgacactttaaaaaaattatataccatgactaactgggatttatctcaatagtacaaatttgacttgatatatgaaaatcagctaatgtgatacaccatattagcgcaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacccaacactgcttcatgat---------------------------------aaaaacactcatcaaactagaaacagaaggaaactttttcaactacgtaaaggccatctgcaaaataacagcagctaaaattatatctaattgtgaaaaattgaatgctttccttctaaaatcaggaaATagaaataaaatcatccctattcatgatcttctatttagaaaatactaagaaattgacacaaaaaa-tgttaaaactaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaacatataatccaaataagaaattaa-gaaaacaattatatttacaaaagcatcagaataaaatagaaataaatttaacaaaaaacatggatcacttgtacactggaaactataaaacataattgagaaaaaaatatggaagataggaggcaagactcacttgcagctcctactcagattaacagaacaagatgtggagactcacattatgaacttttgctccaagacatattgcaggaacatactgggaaaacaaacaaacaaaaa-------aaaaaattacagactttttgaaagaaggagcttcctgctgcaaattc-----tgtgagatagtt-aaaaactgactg-cccaaagtttgagagggagaaagtccgcatctgaatacagattctccctggggaacctgaaaatcaagattacaggagaaagatttaacgttacctaaagctgaaacaaatttagagagccaagtgaagtataaaagtaaaagaagcagtgagaagagctggtccagcaggactcctggtccccagggaagccatttctgacttcatctcacaggggtcctttgagaggactgccagcagaattgtagaaggaccaaaggaacaagaaaacttccaggtgaactttttaataattttgacctaacgtgaaatttccggggcagaatcggttggggagtgggggcggtgaatgcgaagagcaggtgcaagcacagaacacatggcaggcagggatggaaaaggcctgaaagcccggcttgctttctcagggggaaggtttgtagcctgggtcaagaactccaccctgctcactggctgtctgggtgtaaacttagtgctgttggtggggcatggtgaaagtgagcctttctggctacataagagctgggagaggcaggtca-tgctggcattcccctacttccctggtgacctgtatgatgcagcagaggaagtcataatctcccCAGATTCCCTCTCT----gaagaaagaacttaagaacttaaaaacaaagcattcaaattaacctaatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagactccacgaagttttggattatgttaagcaaccaaacctaagaataattggtgttcatgagaaagatgatacatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctagcctttctagagatctagacatacaagtacaagaagctcaaagaacacccgaggaattcatcacaaaaagatctttacctaggcacatggccatcaggtaatctaaagtcaaaacaaaagaaacgatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tgagacaaacagcagatttttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8657828 2019 + 9440265 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-tagaagatgagaaaacacttcccattttattttatttgaccagtattaccataataccaaaccaaagaaatcataacaacaaagaaacccacaaaccaatgtttcttatgtatattaatgcaaaatcttcaaatgtcagcaaaccaaagtgacactttaaaaaaattatataccatgactaactgggatttatctcaatagtacaaatttgacttgatatatgaaaatcaactaatgtgatacaccatattagcgcaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacccaacactgcttcatgat---------------------------------aaaaacactcatccaactagaaacagaaggaaactttttcaactacataaaggccatctgcaaaataacagcagctaaaattatatctaattgtgaaaaattgaatgctttccttctaaaatcaggaaatagaaataaaatcatccctattcatgatcttctatttagaaaatactaagaaattgacacaaaaaa-tgttaaaactaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaacatataatccaaataagaaattaa-gaaaacaattatatttacaaaagcatcagaataaaatagaaataaatttaacaaaaaacatggatcacttgtacactggaaactataaaacataattgagaaaaaAATatggaagataggaggcaagactcacttgcagctcctactcagattaacagaacaagatgtggagactcacattatgaacttttgctccaagacatattgcaggaacatactgggaaaacaaacaaacaaaca-------aaaaaattacagactttttgaaagaaggagtttcctgctgcaaattc-----tgtgagatagtt-aaaaactgactg-cccaaagtttgagagggagaaagtccgcatctgaatacagattctccctggggaacctgaaaatcaagattacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagccaagtgaagtataaaagtaaaagaagcagtgagaagagctggtccagcaggactcctggtccccagggaagccatttctgacttcatctctcaggggtcctttgagaggactgccagcagaattgtagaaggaccaaaggaacaagaaaacttccaggtgaactttttaataattttgacctaacgtgaaatttccggggcagaatccgttggggagtgggggcggtgaatgcgaagagcaggtgcaagcacagaacacatggcacgcagggatggaaaagacctgaaagtccggcttgctttctcagggggaaggtttgtagcctgggtcaagaactccaccctgctcactggctgtctgggtgtaaacttagtgctgttggtggggcatggtgaaagtgagcctttctggctacataagagctgggagaggcaggtca-tgctggcattcccctacttccctggtgacctgtatgatgcagcagaggaagtcataatctcccCAGATTCCCTCTCT----gaagaaagaacttaagaacttaaaaacaaagcattcaaattaacctaatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagactccacgaagttttggattatgttaagcaaccaaacctaagaataattggtgttcatgagaaagatgatacatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctagcctttctagagatctagacatacaagtacaagaagctcaaagaacacccgaggaattcatcacaaaaagatctttacctaggcacatggccatcaggtaatctaaagtcaaaacaaaagaaacgatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tgagacaaacagcaga-ttttt i macNem1.NW_012019910v1 I 2348 C 0 s cerAty1.NW_012002954v1 8388874 2018 + 21915920 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-tagaagatgagaaaacacttcccattttattttatttgaccagtattaccataataccaaaccaaagaaatcataacaacaaagaaacccacaaaccaatgtttcttatgtatattaatgcaaaatcttcaaatgtcagcaaaccaaagtgacactttaaaaaaattatataccatgactaactgggatttatctcaatagtacaaatttgacttgatatatgaaaatcaactaatgtgatacaccatattagcgcaaagaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacccaacactgcttcatgat---------------------------------aaaaacactcatcaaactagaaacagaaggaaactttttcaactacgtaaaggccatctgcaaaataacagcagctaaaattgtatctaattgtgaaaaactgaatgctttccttctaaaatcaggaaATagaaataaaatcatccctattcatgatcttctatttagaaaatactaagaaattgacacaaaaaa-tgttaaaactaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttatacattactaacatataatccaaataagaaattaa-gaaaacaattatatttacaaaagcatcagaataaaatagaaataaatttaacaaaaaacatggatcacttgtacactggaaactataaaacataattgagaaaaaaatatggaagataggaggcaagactcacttgcagctcctactcagattaacagaacaagatgtggagactcacattatgaacttttgctccaagacatattgcaggaacatactgggaaaacaaacaaacaaaca-------aaaaaattacagactttttgaaagaagcaggttcctgctgcaaattc-----tgtgagatagtt-aaaaactgagtg-cccaaagtttgagagggagaaagtccgcatctgaatacagattctccctggggaacctgaaaatcaagattacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagccaagtgaagtataaaagtaaaagaagcagtgagaagagctggtccagcaggactcctggtccccagggaagccatttctgacttcatctcacaggggtcctttgggaggactgccagcagaattgtagaaggaccacaggaacaagaaaacttccgggtgaactttttaataattttgacctaacatgaaatttccacggcagaattggttggggagtgggggtggtgaatgtgaagagcaggtgcaagcacagaacacatggcaggcagggatggaaaaggcctgaaagcccggcttgctttctcagggggaaggtttgtagcctgggtcaagaactccaccctgctcactggctgtctgggtgtaaacttagtgctgttggtggggcatggtgaaagtgagcctttctggctacataagagctgggagaggcaggtca-tgctggcattcccctacttccctggtgacctgtatgatacagtagaggaagtcataatctcccCATATTCCCTCTCT----gaagaaagaacttaggaactc-aagacaaagcattcaaattaacctaatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagcctccaggaagtttgggattatgttaaacaaccaaacctaagaataattggtgttcatgagaaagatgatacatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcgtttctagagatctagacatacaagtacaagaagctcaaagaacacccgaggaattcatcacaaaaagatctttacctaggcacatagccatcaagtaatctaaagtcaaaacaaaagaaatgatcttgagagctatgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tgagacaaacagcaga-ttttt i cerAty1.NW_012002954v1 I 2347 C 0 s chlSab2.chr2 14965288 2027 - 90373283 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-tagaagatgagaaaacacttgccattttattttatttgaccagtattaccataataccaaaccaaagaaatcacaacaacaaagaaacccacaaaccaatgtttcttatgtatattaaagcaaaatcttcaaatgccagcaaaccaaactgacactttaaaaaaattatataccatgactaactgggatttatctcaatagtacaaatttgacttaatatatgaaaatcaactaatgtgatacaccatattagcacaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataatccaacactgcttcatgat---------------------------------aaaaacactcatcaaactagaaacagaaggaaactttttcaactgcataaaggccatctgcaaaataacaacagctaaaattatatctaattgtgaaaaattgaatgctttccttctaaaatcaggaaATagaaataaaatcatccctattcatgatcttttatttagaaaatactaagaaattgacacaaaaaa-tgttaaaactaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaacatataatccaaataagaaattaa-gaaaacaattatatttacaaaagcatcagaataaaataggaataaatttaacaaaaaacatggatcatttgtacactggaaactataaaacataattgagaaaaaaatatggaagataggaggcaagactcacttgcagcttccactcagattaacagaacaagatgtggagactctcattatgaacttttgctccaagacatattgcaggaacatactgggaaaacaaacaaacaaacaaacaaacaaaaaattacagactctttgaaagaagcagcttcctgctgcaaattc-----tgtgagatagtt-aaaaactcagtg-cccaaagtttgagagggagaaagtccacatctgaatacagattctccctggggaacctgaaaatcaagattacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagccaagtgaagtataaaagtaaaagaagcagtgagaagagctggtccagcaggactcctagtccccagggaagccatttatgacttcatctcacaggggtcctttgggaggactgccagtagaattgtagaaggaccacaggaacaagaaaacttccaggtgaactttttaataattttgacctaacatgaaatttccagggcagaatcggttggggagtgggggcggtgaatgtgaagagcaggtgcaagcacagaagacatggcaggcagggacggaaaaggcctgaaagcccagcttgctttctcagtgggaaggtttgtagcctgggtcaagaactccaccctgctcactggctgtctgggtgtaaacatagtgctgttggtggggcatggtgaaagtgagcctttctggctacataagagctgggagaggcaggtcactgctggcattcccctacttccctggtgacctgtatgatgcagcagaggaagtcataatctcccCAGACTCCTTCTCT----gaagaaagaacttaagaacttaaaaacaaagcattcaaattaacctaatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagactccacgaagttttggattatgttaaacaaccaaacctaagaataattggtgttcatgagaaagatgatacatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctagacatacaagtacaagaagctcaaagaacacctgaggaattcatcacaaaaagatctttacctaggcacacagccatcaggtaatctaaagtcaaaacaaaagaaacgatcttgagagctgtgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tgagacaaacagcaga-ttttt i chlSab2.chr2 I 2345 C 0 s manLeu1.NW_012102865v1 2132941 2017 + 4234846 cac-------------------------------------------------------------------------------aaactcttccaaaaaaaaa-tagaagatgagaaaacacttcccattttattttatttgaccagtattaccataataccaaaccaaagaaatcataacaacaaagaaacccacaaaccaatgtttcttatgtatattaatgcaaaatcttcaaatgtcagcaaaccaaagtgacactttaaaaaaattatataccatgactaactgggatttatctcaatagtacaaatttgacttgatatatgaaaatcaactaatgtgatacaccatattagcgcaatgaaaactaaaagcacatgatcatttctatagataaagtaaaatcctctgacataacccaacactgcttcatgat---------------------------------aaaaacactcatcaaactagaaacagaaggaaactttttcaactacgtaaaggccatctgcaaaataacagcagctaaaattatatccaattgtgaaaaattgaatgctttccttctaaaatcaggaaatagaaataaaatcatccctattcatgatcttccatttagaaaatactaagaaattgacacaaaaaa-tgttaaaactaataagtacagcaaagttgcagaatacaagctcaatatacaaagattaattgtatttttgtacattactaacatataatccaaataagaaattaa-gaaaacaattatatttacaaaagcatcagaataaaatagaaataaatttaacaaaaaacatggatcacttgtacactggaaactataaaacataattgagaaaaaaatatggaagataggaggcaagactcacttgcagctcctactcagattaacagaacaagatgtggagactcacattatgaacttttgctccaagacatattgcaggaacatactgggaaaacaaacaaacaaaca-------aaaaaattacagactttttgaaagaagcaggttcctgctgcaaattc-----tgtgagatagtt-aaaaactgagtg-cccaaagtttgggagggagaaagtccgcatctgaatacagattctccctggggaacctgaaaatcaagattacaggagaaagatttaaccttacctaaagctgaaacaaatttagagagctaagtgaagtataaaagtaaaagaagcagtgagaagagctggtccagcaggactcctggtccccagggaagccatttctgacttcatctcacaggggtcctttgggaggactgccagcagaattgtagaaggaccacaggaacaagaaaacttccaggtgaactttttaataattttgacctaacatgaaatttccacggcagaattggttggggagt-ggggtggtgaatgtgaagagcaggtgcaagcacagaacacatggcaggcagggatggaaaaggcctgaaagcccggcttgctttctcagggggaaggtttgtagcctgggtcaagaactccaccctgctcactggctgtctgggtgtaaacttagtgctgttggtggggcatggtgaaagtgagcctttctggctacataacagctgggagaggcaggtca-tgctggcattcccctacttccctggtgacctgtatgatacagcagaggaagtcataatctcccCATATTCCCTCTCT----gaagaaagaacttaggaactc-aagacaaagcattcaaattaacctaatacaacaaagacaaagaaaataaagtttgaaaaacatgaacaaagcctccaggaagtttgggattatgttaaacaaccaaacctaagaataattggtgttcatgagaaagatgatacatctaaaagtttggaaaacatatttgagagaataatcaaggaatacttccctggcctttctagagatctagacatacaagtacaagaagctcaaagaacacccgaggaattcatcacaaaaagatctttacctaggcacatagccgtcaagtaatctaaagtcaaaacaaaataaatgatcttgagagctatgaggcaaaagcatcaggtagcctgtaaaggaaaaccta---tgagacaaacagcaga-ttttt i manLeu1.NW_012102865v1 I 2665 C 0 s saiBol1.JH378168 5002764 2119 + 13128814 cacaaagaaaagcccagactttgatggctttcccgattaagtttactatatatttaaaaatgaattaatatcaatccttcacaaactcttccaaaaaacac--agaagatgagaaaacacttcccagtctattttatttgacgagtattaccataatatcaagccaaagaaaccat---aataaaaaaacttacagaccaatgtttcttatgaatattaatacaaaatcttcaaatgccagcaaaccaaagtaatactt-aaaaaagttacatatcatgattagctgggatttatctcaagagtaaaaatttggctaaatatatataaatcaactagtgtgatgcaccatattaacacaatgaaaactgaaagcacatgatcatttctacagataaagtaaaagcatctgatatgacccaacatcacttcatgataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacactcatcaagctagaaaaagaagaaaagttttccaactacataaaggccatttataaaataacaacagctaacatcatatctaactatgaaggattgaacgctttccttctaaaatcagaaaatagaaatataatcatccctatttatgatcttgtatttaaaaagaactaagaaattgacacaaaaat-tactaaaattaataagtacagcaaagttgcaggatacaagctcagtatgcaaagattaattgtatttttgtacattagcaacacataatctgaataagaaattaaggaaaacaattatatttacaaaagcatcagaataaaataggaataaatttaacaaaaaacatggatcgcttgtacactggaaactataaaaCATAATT-AG-AAAAAATatggatgataggaggcaggaatcatttgcagctcccactc--attaatagaacaacatgtgaagactcacattatgaaattttgctccaagacatactgcaggatcatactgggaaaaca---aaacaaaac-------caaaaattacaaaccctttgaaagaagcagcttgctgctgcaaactc-----tgtgagacagctgaaaaactgagtgccccaaagtgtgagagagagaaagtccacctctcaacacagagtctcactgaggaatctaaacatcaagatcacaggagaaagatttaaacttacctaaagctaaaacaaatttagagagccaagtgaaatataaaagtagaagtagtagtgagaagagctggtttagcaggactcctggttcccagggaaaccatttctgactccatctcacagcggtccttggggagggctgccagtagaattggagaaggaccacagtaagaagaaaacgttgaggtgaactttttaataattttgattgagcacgacttttcctgggcagaact--------ggtgggggcggtgaatgagaagtgcaggtataagcacagaagccatggcaggcagggatggaaaagacctgaaagccctgcttgctttcttagtggggaggtttgtagcctgggacaagaactcagccctgctcactggctgtctcaatataagctcagtgccattggtagggcatggtaaaagtgagcctttctggctacataagagctgagagaggcaggtcactgc-agtattcccgcacttccctggtgacctgtatgatgaagtagaggaagtcataatctcccCATAAACCCTTTCTAAAGAaagaaagaatttaagacctcaaagacaaagcattcaaattaaccaaatacagcaaagacaaacaagaaaaagttttaaaaacatgaacaaagcctccaagaagtttgggattatgttaaataaccaaacctaagaataattggtgttcatgagaaagatgagaaatctaaaagtttggaaaacatatttgagagaataatcaaggaaaacttccctggcgttgttagatatctagacatacaagtacaagaagctcaaagtacacctgaggaatttttcacaaaaagatcttgacctcggcacatagtcatcaggtaatctaaagtcaaaacaaaagagacaaacttgagagctgtgaggcaaaaacatcaggtagcct-taagggaaaacctaccttaaggc-aataaaaga-tattt i saiBol1.JH378168 C 0 I 9780 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=22015605.000000 s hg38.chr21_KI270874v1_alt 31722 4670 + 166743 tagcagaaaccctacaagctagaagtgattggggtcctatctttatcctcctt----taaaaaaaaaaa-------ttatcagccaagaatattgtatccagcaaaattaagcttcattaatgagtaaaagataaagtc-tttttcaaacaaacaaatgctgacagcatttgtcactgccaaatgaatactaaaagaattactaaaaggggttccaaattttgaaacaaattctcaaaatacaccaaaatagaaacttcttaaggttcttaaagcacaaatctcacagggcctgtaaaacaataacacaata---aaaaaaaaaaaaaaaaaacaaggtattcaggcaacaaatggcatgatgaatagaaaagtacctcacatctcaataccaacattgaatataaatggtctaatcgctcaacttaagagatacagaatggcagaatggataaaaattcaccaagcaagattctgctgtcttcaagaaactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaatgaacaccaagagccaacagaagtatctattcttatattagacaaaacagactttaaagaaagagtagttaaaaagacaaagatgtatattatgtaatgataacaggactagtccaacagaaaaatatcataattctaaatatatatgcaccttacagtggagattccaaatgtgaaaaacaattactactagacccaagaaatgagatagatagcatataata--------atagtggggactttagtaccccactgactgaactctcatcaagacagaaagtcaacaaagaaacaatggacttaaactatatccttcaacaaatggacttaacagatatttatagaacattgtatacccaatgattgcagaatatacattctattcattagcacacagaacattctccaagatagaccatacgatacaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagaactctttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaaggaaattaaatagtctgctcctaaatgatccttgggtcaacaatacaatcaagacagaaattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcagggatagagcaaaagaggtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtctgaaagaacacacatatgccatctaaggtcatgccttgaggaactatagaaacaagaacaagc------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcagaactaaatgaaactgaaacaaaaataaatacaaaagataaatgaaagaaaaacctggttcattgaaaagataaac-aaaactaatagaacattagtgagattaaccaagacaagaagagagaagatccaaataagctcaattagaaacaaaacagaaaataccacagaaatacaaaagatcattcaaggctactataaacacttttatgtgcatgaactgaaaaacctagaggaaatggataaattcctagaaatataaaaccctcctagattaaaacagg----aatagaaactctgaacagaccaaaaacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa---aaaaatctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactatttcaaacgatagagaaagagggactctccct-aattatgttatggagccagtgtcaccctactaccaaaaccaggaaataacataacaaaaaaagaaaactagagacaaacgtctctgatgaatgttaatgcaaaaattctcaacaaaatattagctaaccaaatccaacagcatatcaaaaagataatccaccatg-atcaagttggtttcataccagcgattcaaagatggtttaatatacctaaatcaataaacatgatacaccacataaacagaatcaaaaag--aaaaatcacatgatcatctcaatagattcagaaaagcatttgataaaatccaacattgctttatgattaaaactctcagtaaaactggtgtagaagggacataccttaaagtaataacagatatctatgacagactcacagccaacattatactgaatgtgatagtgttaaaagcattcccctgagaacttcgacaagccaagaatgcccactttcaccacttctattcaacatagtattggaagtcctacccaaggcaatcagagaagagaaaaataaagggtatccaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgatattatcatataactagaaaaccccaaagactcatccaaagagctcctaggtctgataaatg--------aaagtttcaggatacaaaatcaatgtacataaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaCtgatagggacaggaggcagggaaattctgggtagaagagggcaggtgcccagtg-------agggcccTGCTgattctc-------atcaaatccctggtctatcatggatagcttggtataattgagaggcttaattctagtcctccattatgcacacctgaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccaatggtactgtttctcttccagttggataaagtttgaccccttccctgacactatatgtgatacaaagctcaatcctttctggaaaggctaagaagggctttgataaagcacacctctctatctcctgattcagttgagggacacttaatccctaaatgtatttaaaaatccatgtattactaaaaaa-taagtgg-attactcaggtatcccctgatatcaggaggaagctgcagaaatgggccctgagaccagatagtactttagagaacctcctgaaattgaccacttccatcttttataatagagatagggaaacccaagagagagagaggagacacaggaaagaggcagaggcttcaatggccaccatgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggcagcatgaggaacccaccttgaccctgtccaatctgcaaaggggaccactggaaggtggactgtcaccagggacactggtaactgggttcagagccaatcgcccaaatggtccagcaggactgatggctcccagggttcctctttccagctccagtggtccagaccaccactaccatccaggagctccagataattttggaaactgaatagagaaaagtggatctccctctgcacaccatggctggtctctcagttctcctctccaatctgag-----------------------ctc----cctctactctcttagcataac-tagtgaggggtgtctcaggaagtcctttaatccaatattcttcccaacccgttaattgtagt---tcaggagacctcttgttcacccatgcctttctaattatccctgaaagcaccaactcctctgttgggtaggaatattctgacccatatggggaccaccatcctgatggccacaggacaaactctttctctctccctagtggagactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccataccgg-ctgggtc------caccttaaggctctcacctcctttcctaaccagaaacaatagcccctgaaaccagaagttaagaaaggactagaagccattattgataacttaaggttgcaaggcctcctcaaaccctggaacagccctttaataccccaatattcagggcacaaaaa-cccagtt-gggaatggagactagttcagtacctccacctcgttaatgaggctgtggttccaattcacctggtggttcccaatccacattccctactagctcaaatacctaaggaaactaaatagttcacagtcccagacctaaaggatgccttcttctgcctaccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaaataaaccacccagttaacctgaatgatgttacctcagggactctgagatggcccccacgtgtttggacaggcattgtcaagagaaccctctgagttactttatcctcaggtgaaagttttacagtatgtagatgacatacttctctgaacttcaactgaggaaatctctcaggagggcagtaaggctcttcttaatttcctggctaacagagaatacaaggtttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttccccaaaacactcaagcaac-tgaggggattcttaggcattacaggattctgcagactatggatacctgggtacagtgaatagctcatcccttatatcacctaataaaggagatttggatagctaaaactcactaatttgggaaccagaggcta s panTro5.chr21 3656228 4669 + 33445071 tagcagaaaccctacaagctagaagtgattggggtcctatctttatcctcctt----taaaaaaaaaaa------attatcagccaagaatattgtatccagcaaaattaagcttcattaatgagtaaaagataaagtc-tttttcaaacaaacaaatgctgagagcatttgtcactgccaaatgaatactaaaagaattactaaaaggagttccaaattttgaaacaaattctcaaaatacaccaaaatagaaacttcttaaggttcttaaagcacaaatctcacagggcctgtaaaacaataacacaatg---aaaaaaaaaaaaa-----caaggtattcaggcaacaaatggcatgatgaatagaaaagtatctcacatctcaataccaacattgaatataaatggtctaattgctcaatttaagagacacagaatggcagaatggataaaaattcaccaagcaagattctgctgtcttcaagaaactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaatgaacaccaagagccaacagaagtatctattcttatattagacaaaacagactttaaagaaagagtagttaaaaagacaaagatgtatattatgtaatgataacaggactagtccaacagaaaaatatcataattctaaatatatatgcaccttacagtggagattccaaatgtgaaaaacaattactactagacccaagaaatgagatagatagcatataata--------atagtggggactttagtaccccactgactgaactctcatcaagacagaaagtcaacaaagaaacaatggacttaaactatatccttcaacaaatggacttaacagatattgacagaacattgtatacccaatgattgcagaatatacattctattcattagcacatagaacattctccaagatagaccatacgatacaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactctttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaaggaaattaaatagtctgctcctaaatgatccttgggtcaacaatacaatcaagacagaaattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcagggatagagcaaaagaggtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtctgaaagaacacacatatgcaatctaaggtcatgccttgaggaactatagaaacaagaactaac------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcagaactaaatgaaactgaaacaaaaataaatacaaaagataaatgaaagaaaaagctggttcattgaaaagataaac-aaaactaatagaacattaatgagattaaccaagacaagaagagagaagatccaaataagctcaattagaaacaaaacaggaaataccacagaaatacaaaagatcgttcaaggctactataaacacttttatgtgcatgaactgaaaaacctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacagg----aatagaaactctgaacagaccaaaaacaaatagcaagattgaaatggtaatttaaaaattgccaacaacaac-aaaaaatctaggaccagatggattcacagctgaattctatcagacattca---aagattcgataccaatcctattgaaactattccaaacgatagagaaagagggactctccct-aattatgttatagagccagtgtcaccctactaccaaaaccaggaaagaacataacaaaaaaagaaaactaaagacaaacgtctctgatgaatgttaatgcaaaaattctcaacaaaatattagctaaccaaatccaacagcatatcaaaaagataatccaccatg-atcaagttggtttcataccagggattcaaagatggtttaatatacataaatcaataaacatgatacaccacataaaccgaatcaaaaag--aaaaatcacatgatcatctcaatagattcagaaaagcatttgataaaatccaacattgctttatgattaaaactctcagtaaaactggtgtagaagggacataccttaaagtaataacagatatctatgacagactcacagccaacattatactgaatgggatagtgttaaaagcattcccctgagaacttcgacaagccaagaatgcccactttcaccacttctattcaacatagtgttggaagtcctacccaaggcaatcagagaagagaaaaataaagggtatccaaatcggtaaagatgaagtcaaactgttgctgttcaccagtgatatcatcatataactagaaaaccccaaagactcatccaaagagctcctaggtctgataaatg--------aaagtttcgggatacaaaatcaatgtacataaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaCtgatagggacaggaggcagggaaattctgggtagaagagggcaggtgcccagtg-------agggcccTGCTgattctc-------atcaaatccctggtctatcatggatagcttggtataattgagaggcttaattctagtcctccattatgcacacctgaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccaatggtactgtttctcttccagttgaataaagtttgaccccttccctgacactatatgtgatacaaagctcaatcctttctggaaaggctaagaagggctttgataaagcacacctctctatctcctgattcagttgagggacacttaatccctaaatgtatttaaaaatccatgtattactaaaaaaataagtgt-attactcaggtatcccctgatatcaggaggaagctgcagaaatgggccctgagaccagatagtactttagagaacctcctgaaagtgaccacctccatcttttataatagagatagggaaacccaagagagagagaggagacacaggaaagaggcagaggcttcaatggccaccatgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggcagcatgaggaacccaccttgaccctgtccaatctgcaaaggggaccactggaaggtggactgtcaccagggacactggtaactgggttcagagccaatcgcccaaatggtccagcaggactgatggctcccagggttcctctttccagctccagtggtccagaccaccattaccatccaggagctcaagataattttggaaactgaatagagaaaagtggatctccctctgcacaccatggctggtctctcagttctcctctccaatctgag-----------------------gcc----cctctactctcttaacataac-tagtgaggggtgtctcaggaagtcctttaatccaatattcttcccaaccccttaattgtagt---tcaggagacctcttgttcacccatgcctttctaattacccctgaaagcgccaactcctctgttgggcaggaatattctgacccatatggggaccaccatcctgatggccacaggacaaactctttctctctccctagtggagactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccataccgg-ctgggtc------caccttaaggctctcacctcctttcctaaccagaaacaatagcccctgaaaccagaagttaagagaggactagaagccattattgataacttaaggttgcaaggcctcctcaaaccctggaacagccctttaataccccaatattcagggcacaaaaa-cccagtt-gggaatggagactagttcagtacctccacctcgttaatgaggctgtggttccaattcgcctggtggttcccaatccacattccctactagctcaaatacctaaggaaactaaatagttcacagtcccagacctaaaggatgccttcttctgcctaccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaaataaaccacccagttaacctgaatgatgttacctcagagactctgagatggcccccacatgtttggacaggcattgtcaagagaaccctctgagttactttacccccaggtgaaagttttacagtatgtagatgacatacttctctgaacttcaactgaggaaatctctcaggagggcagtaaggctcttcttaattttctggctaacagagaatacaaggtttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttccccaaaacactcaagcaac-tgaggggattcttaggcattacaggattctgcagactatggatacctgggtacagtgaatagctcatcccttatatcacctaataaaggagacttggatagctaaaactcactaatttgggaaccagaggcta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17283156 4663 + 46275980 tagcagaaaccctacaagctagaagtgattggggtcctatctttatcctcctt----taaaaaaaaa---------ttatcagccaagaatattgtatccagcaaaattaagcttcattaatgagtaaaagataaagtc-tctttcaaacaaacaaatgctgagagcatttgtcactgccaaatgaatactaaaagaattactaaaaggagttccaaattttgaaacaaattctcaaaatacaccaaaatagaaacttcttaaggttcttaaagcacaaatctcacagggcctgtaaaacaataacacaatg---aaaaaaaaaa--------caaggtattcaggcaacaaatggcatgatgaatagaaaagcacctcacatctcaataccaacattgaatataaatggtctaattgctcaatttaagagacacagaatggcagaatggataaaaattcaccaagcaagattctgctgtcttcaagaaactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaatgaacaccaagagccaacagaagtatctattcttatattagacaaaacagactttaaagaaagagtagttaaaaagacaaagatgtatattatgtaatgataacaggactagtccaacagaaaaatatcataattctaaatatatatgcaccttacagtggagattccaaatgtgaaaaacaattactactagacccaagaaatgagatagatagcatataata--------atagtggggactttagtaccccactgactgaactctcatcaagacagaaagtcaacaaagaaacaatggacttaaactatatccttcaacaaatggacttaacagatattgacagaacattgtatacccaatgattgcagaatatacattctattcattagcacatagaacattctccaagatagaccatacgatacaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactctttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaaggaaattaaatagtctgctcctaaatgatccttgggtcaacaatacaatcaagacagaaattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcagggatagagcaaaagaggtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtctgaaagaacacacatatgcaatctaaggtcatgccttgaggaactatagaaacaagaactaac------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcagaactaaatgaaactgaaacaaaaataaatacaaaagataaatgaaagaaaaagctggttcattgaaaagataaac-aaaactaatagaacattagtgagattaaccaagacaagaagagagaagatccaaataagctcaattagaaacaaaacaggaaataccacagaaatacaaaagatcgttcaaggctactataaacacttttatgtgcatgaactgaaaaacctagtggaaatggataaattcctggaaatataaaaccctcctagattaaaacagg----aatagaaactctgaacagaccaaaaacaaatagcaagattgaaatggtaatttaaaaattgccaacaacaacaaaaaaatctaggaccagatggattcacagctgaattctatcagacattca---aagattcgataccaatcctattgaaactattccaaacgatagagaaagagggactctccct-aattatgttatagagccagtgtcaccctactaccaaaaccaggaaagaacataacaaaaaaagaaaactaaagacaaacgtctctgatgaatgttaatgcaaaaattctcaacaaaatattagctaaccaaatccaacagcatatcaaaaagataatccaccatg-atcaagttggtttcataccagggattcaaagatggtttaatatacataaatcaataaacatgatacaccacataaacagaatcaaaaag--aaaaatcacatgatcatctcaatagattcagaaaagcatttgataaaatccaacattgctttatgattaaaactctcagtaaaactggtgtagaagggacataccttaaagtaataacagatatctatgacagactcacagccaacattatactgaatgggatagtgttaaaagcattcccctgagaacttcgacaagccaagaatgcccactttcaccacttctattcaacatagtattggaagtcctacccaaggcaatcagagaagagaaaaataaagggtatccaaatcggtaaagatgaagtcaaactgttgctgttcaccagtgatatcatcatataactagaaaaccccaaagactcatccaaagagctcctaggtctgataaatg--------aaagtttcgggatacaaaatcaatgtacataaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaCtgatagggacaggaggcagggaaattctgggtagaagagggcaggtgcccagtg-------agggcccTGCTgattctc-------atcaaatccctggtctatcatggatagcttggtataattgagaggcttaattctagtcctccattatgcacacctgaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccaatggtactgtttctcttccagttgaataaagtttgaccccttccctgacactatatgtgatacaaagctcaatcctttctggaaaggctaagaagggctttgataaagcacacctctctatctcctgattcagttgagggacacttaatccctaaatgtatttaaaaatccatgtattactaaaaaa-taagtgt-attactcaggtatcccctgatatcaggaggaagctgcagaaatgggccctgagaccagatagtactttagagaacctcctgaaagtgaccacctccatcttttataatagagatagggaaacccaagagagagagaggagacacaggaaagaggcagaggcttcaatggccaccatgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggcagcatgaggaacccaccttgaccctgtccaatctgcaaaggggaccactggaaggtggactgtcaccagggacactggtaactgggttcagagccaatcgcccaaatggtccagcaggactgatggctcccagggttcctctttccagctgcagtggtccagaccaccattaccatccaggagctcaagataattttggaaactgaatagagaaaagtggatctccctctgcacaccatggctggtctctcagttctcctctccaatctgag-----------------------ccc----cctctactctcttaacataac-tagtgaggggtgtctcaggaagtcctttaatccaatattcttcccaaccccttaattgtagt---tcaggagacctcttgttcacccatgcctttctaattatccctgaaagcgccaactcctctgttgggcaggaatattctgacccatatagggaccaccatcctgatggccacaggacaaactctttctctctccctagtggagactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccataccgg-ctgggtc------caccttaaggctctcacctcctttcctaaccagaaacaatagcccctgaaaccagaagttaagagaggactagaagccattattgataacttaaggttgcaaggcctcctcaaaccctggaacagccctttaataccccaatattcagggcacaaaaa-cccagtt-gtgaatggagactagttcagtacctccacctcgttaatgaggctgtggttccaattcacctggtggttcccaatccacattccctactagctcaaatacctaaggaaactaaatagttcacagtcccagacctaaaggatgccttcttctgcctaccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaaataaaccacccagttaacctgaatgatgttacctcagggactctgagatggcccccacgtgtttggacaggcattgtcaagagaaccctctgagttactttacccccaggtgaaagttttacagtatgtagatgacatacttctctgaacttcaactgaggaaatctctcaggagggcagtaaggctcttcttaattttctggctaacagagaatacaaggtttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttccccaaaacactcaagcaac-tgaggggattcttaggcattacaggattctgcagactatggatacctgggtacagtgaatagctcatcccttatatcacctaataaaggagacttggatagctaaaactcactaatttgggaaccagaggcta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3222208 4669 - 13858734 tagcagaaaccctacaagctacaagagattggggtcctatctttatcctcctt----taaaaaaaaaaa----aaattatcagccaagaatattgtatccagcaaaactaagcttcattaatgagtaaaagataaagtc-t-tttcaaacaaacaaatgctgagagcatttgtcactgccaaatgaatactaaaagaattactaaaaggagttccaaattttgaaacaaattctcaaaatacaccaaaatagaaacttcttaaggttcttaaagcacaaatctcacagggcctgtaaaacaataacacaatg---aaaaaaaaaaaa------caaggtattcaggcaacaaatggcatgatgaatagaaaagtacctcacatctcaataccaacattgaatataaatggtctaattgctcaacttaagagatacagaatggcagaatggataaaaattcaccaagcaaggttctgctgtcttcaagaaactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaatgaacaccaagagccaacagaagtatctattcttatattagacaaaacagactttaaagaaagagtagttaaaaagataaagatgtatattatgtaatgataacaggactagtccaacagaaaaatatcataattctaaatatatatgcaccttacagtggagattccaaatgtgaaaaacaattactactagacccaagaaatgagatagagagtgtataata--------atagtggggactttagtaccccactgactgaactctcatcaagacagaaagtcaacaaagaaacaatggacttaaactatatccttcaacaaatggacttaacagatatttacagaacattctatacccaatgattgcagaatatacattctattcatcagcacatagaacattctccaagatagatcatacgatacaccacaaaacaagtctcaacaaatttaagaaaatcaaaattacaccaagtactctttcagaccacggtggaataaagttggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaaggaaattaaatagtctgctcctaaatgatccttgggtcaacaatacaatcaagaca-aaattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcagggatagaacaaaagaggtgctaaaaggaaagttcatagcattaaatatctacatcaaaaagtctgaaagaacacacatatgcaatctagggtcatgccttgaggaactatagaaacaagaacaaac------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcagaactaaatgaaactgaaacaaaaataaacacaaaagataaatgaaagaaaaagctggttcattgaaaagataaac-aaaactaatagaacattagtgagattaaccaagacaagaagagagaagatccaaataagctcaattagaaacaaaacaggaaataccacagaaatacaaaagatcgttcaaggctactataaacacttttatgttcatgaactgaaaaacctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacagg----aatagaaactctgaacagaccaaaaacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa---aaaaatctaggaccagatggattcacagctgaattctatcagacattca---aagattcgataccaatcctattgaaactattccaaacaatagagaaagagggactctccct-aattatgttatggagccagtgtcaccctactaccaaaaccagaaaagaacataacaaaaaaagaaaactagagacaaacgtctctgatgaacgttaatgcaagaattctcaacaaaatattaactaaccaaatccaacagcctatcaaaaagataatccaccatg-atcaagttggtttcataccagggattcaaagatggtttaatatacataaatcaataaacatgatataccacataaacagaatcaaaaag--aaaaatcacacgatcatctcaatagatgcagaaaagcatttgataaaatccaacattgctttatgattaaaactctcagtaaaactggtgtagaagggacataccttaaagtaataacagatatctatgacaaactcacagccaacattatactgaatggggtagtgttaaaagcattcccctgagaacttcgacaagccaagaatgcccactttcactgcttctattcaacatagtattggaagtcctacccaaggcaatcagagaagagaaaaataaagggtatccaaatcggtaaagatgaagttaaactgttgctgttcaccaatgatatcatcatataactagaaaaacccaaagactcatccaaagagctcctaggtctgataaatg--------aaagtttcgggatacaaaatcaatgtacataaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaCtgatacggacaggaggcagggaaattctgggtagaagagggcaggtccccagta-------agggccctgctgattctcaaatcaaatcaaatccctggtctatcatggatagcttggtataattgagaggcttaattctagtactctattatgcacacctgaaagtgtctcctcttccattctcccatctcgtcattgggatcccatttagggtcatccagtggtactgtttctcttccagttggataaagttcgaccccttccctgacactatatgtgatacaaagctcaATcttttctggaaaggctaagaagggctttgataaagcacacctctctatctcctgattcagttgagggacacttaatccctaaatgtatttaaaaatccatgtattactaaaaaa-taagtgt-attactcaggtatcccctgatatcaggaggaagctgcagaaatgggccctgagaccagatagtactttagagaccctcctgaaagcgaccacctccatcttttataatagagatagggaaaccc--gagagagagaggagacacaggaaagaggcagaggcttcaatggccaccatgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggcagcatgaggaacccactttgacactgtccaatctgcaaaggggaccactggaaggtggactgtcaccagggacactggtaactgggttcagagccaattgcccagatggtccagcaggactgatggctcctggggttcctctttccagctccagtggtccagaccaccattaccatccaggagctccagacaattttggaaactgaatagaggaaagtggatctccctctgcacaccatggctggtctctcagttctcctctccaatctgag-----------------------ccc----cctctactctcttaaaaaaac-tagtgaggggtgtcgcaggaagtcctttaatccagtatttttcccaaccccttaattgtagt---tcaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caactcctctgttgggcaggaatattctgacccatatggggaccaccaacctgatggccacaggacaaactctttgtctctccctagtggagactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccataccag-ctaggtc------caccttaaggctctcacctcctttcctaaccaaaaacaatagcccctgaaaccagaagttaagaaaggactagaagccattattgataacttaaggttgcaaggcctcctcaaaccctggaacagccctttaataccccaatattcagggcacaaaaa-cccagtg-gggaatggagactagttcagtacctccacctcattaatgaggctgtggttccaattcacctggtggttcccaatccacattccctactaggtcaaatacctaaggaaactaaatagttcacagtcccagacctaaaggatgccttcttctgcctaccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaaataaaccacccagttaacctgaatgatgttacctcagggactctgagatggcccccacgtgtttggacaggcattgtcaagagaaccctctgagttactttatcctcaggtgaaagttttacagtatgtagatgacattcttctctgaacttcaactgaggaaatctctcaggagggcagtaaggctcttcttaattttctggctaacagagaatacaaggtttcaaaatctaaaggtcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagcggaccagggcattgagcaaagaaaggattaatcccattttctcctttcctttccccaaaacactgaagcaac-tgaggggattcttaggcattacaggattctgcagactgtggatacctgggtacagtgaatagctcatcccttatatcacctaataaaggagacttggatagctaaaactcactaatttgggaaccagaggcta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4404400 4700 + 32716333 tagcagaaaccctacaagctagaggggattgagatcctatctttatcctcctt----taaaaaaaaaaaaaacaaattatcagccaagaatattgtatccagcaaaactaagcttcattaatgagtgaaagataaagtc-tttttcaaacaaacaaatgctgagaggatttgtcactaccaaatgaatactaaaagaattactaaaaggagttccaaattttgaaaaaaattctcaaaatacaccaaaatagaaactttttaaggttcttaaagcacaaatctcacagggcctataaaacaataacacaatg---aaaaaaaaa---------caaggtgttcaggcaacaaatggcatgatgaatagaaaagtacctcacatctcaataccaacattgaatataaatggcctaattgctcaacttaagagacacagaatggcagaatggataaaaattcaccaagcaaggttctgctgtcttcaagaaactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaatgaacaccaagagccaatagaagtatctattcttatattagacaaaacagactttaaagaaagagtagttaaaaagacaaagatgtacattatgtaatgataacaggactagtccaacaggaaaatatcataattctaaatatatatgcaccttacagtggagattccaaatgtgaaaaacaattactactagacccaagaaatgagataaatagcatataata--------atactggggactttagtaccccactgactgaactctcatcaagacagaaagtcaacaaagaaacaatggacttaaactatatccttcaacaaatggacttaacagatatttacagaacattctatgtgcaatgattgcagaatatacattctattcgtcagcacatagaacattctccaagatagaccacatgatacaccacaaaacaagtctcaataaatttaagaaaatcaaaattttaccaagtactctttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaagaaaattaaatagtctgctcctaaatgatccttgggtcaacaatacaatcaagacggaaattaaaaatttgtttgaactgaatgatagtaatgacacaacctaacaaaacctcagggatagagcaaaagaggtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtctgaaagaacacacatatgcaatctaaggtcatgccttgaggaactatggaaacaagaacaaat------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcagaactaaatgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaagctggttcattgaaaagataaac-aaaactaacagaacattagtgagattaaccaagac-agaagagagcagatccaaataagctcaattagaaacaaaacagg-aacaccacagaaatacaaaagatcactcaaggctactataaacacttttatgtgcatgaactgaaaaacctagaggaaatggataaattcctggaaatataaaaccctcctagattaacacaggaagaaatagaaactctgaacagaccaataacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaa----aaaagtctacgaccagatggattcacagctgaattctatcagacattcaaagaagatttgataccaattctactgaaactattccaaaagatagagaaagagggactctccct-aattatgttatggagccagtgtcaccctactaccaaaaccaggaaagaacataacaaaaaaagaaaactagagacaaacgtctctgatgaacgttaatgcgaaaattctcaacaaaatattagctaaccaaatccaacagcatatcaaaaagacaatccaccatg-atcaagttggtttcataccagggattcaaaaatggtttaaaatacataaatcaataaacatgatacaccacataaatagaatcaaaaag--aaaaatcacatgatcatctcaatagacgcagaaaagcattcgataaaatccaacattgctttatgattaaaactctcagtaaaactggtgtagaagggacataccttaaagtaataaaagatatctatgacaaactcacagccaacattatactaaatgggataatgttaaaagcaatcccctgagaacttcgacaagccaagaatgcccactttcaccacttctattcaacatagtattggaagtcctacccaaggcaatcagagaagagaaaaataaagggtatccaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgatatcatcatataactagaaaaccctaaagactcatccaaaaagctcctaggtctgataaatg--------aaagtttcaggatacaaaagcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaaggtgagaatcaaCtgatagggacaggaggcagggaaattctgagtggaagagggcaggttcccattg-------agggccctactgattctc-------accaaatccctggtctatcatggatagcttgctataattgagaggcttagttctagtcctccattatgcacacccgaaagtgtctcctcttccattctcccatcccatcattgggatcccatttagggtcatccagtggtactgtctctcttccagttggataaagttcgaccccttccctgacaccatatgtgatacaaagctcaatcctttctggaaaggctaagaaggcctttgataaagcacacctctctatctcctgattcagttgagggacacttaatccctaaatgtatttaaaaatacatgtatgactaaaaaa-taagtgtaattactcaggtatcccatgatatcaggatgaagctgcagaaatgggccctgagaccagatagtacttcagagaacctcctgaaagtgaccacctccatctttcataatagagatagggaaacccaagagagagagaggagacacaggaaagaggcaggggcttcaatggccaccatgcaagcccacaaacccagaatccctgacgtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaattccccaggcagcatgaggaatccaccttgaccctgtccaatctgcaaaggggaccactggaaggtggactgtcaccagggacactggtaactgggttcagagccaattgcccaaatggtccagcaggactgatggctcccagggttcctctttccagctccagtggtccagaccaccattaccatccaggagtcccacataattttggaaactgaatagaggaaagtggatctccctctgcacaccatagctggtctctcagttctcctctccaatctgagaggatctccaatctgagatccttccctagacctctactctcttagcatgac-tagtgaggggtgtctcaggaagtcctttaatccaatatttttcccaaccccttaattgtagtagctcaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caactcctctcttgggaaggaatattctgacccatacggggaccaccatcctgatggccacaggacaaactttttgtctctccctagtggaaactaatattaacccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccctacc-g-ctgggtc------caccttaaggctctcacctcctttcctaaccagaaacaatatcccctgaaaccagaagttaagaaaggactagaagccatca-tgataacttaaggttgcaaggcctcctcaaaccctggaacagccctttaataccccaata-tcagggcacaaaaaccccagttggggaatggagactagtttaggacctccacctcgttaatgaggctggggctccagttcacctggtgattcccaatccacattccttactagctcaaatacctaaggaaactaaatagttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaaccgaaccacccagttaa-ctgaatgatgttacctcagggactctgagatggcccccacatgtttggacagccattgtcaagagaaccctctgagttattttatcctcaggtgaaagttttacagtatatagatgacattattctctgaactccaactgaggaaatccctcaggagggcagtaaggctcttcttaattttctggctaacaaagaatacaaggtttcaaaatctaaatctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttccccaaaacactcaagcaac-tgaggggattcttaggcattacaggattctgcaggctatgggtacctgggtacagtgaatagctcatcccttatatcacctaataaaggagacttggatagctaaaactcactaatttgggaaccagaggcta i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155359144 4682 - 185818997 tagcagaaaccctacaagctagaaggcattgaggt-ctatctttattctcctt-----acaaaaaaaaa-------ttatcagccaagaatattgtatccagcaaaactaagcttcattaatgagcaaaagataaaatcttttttcaaacaaacaaatgctgagaggatttgtcactaccaaatgaatactaaaagaattactaaaaggagctccaaattttggaagaaattctcaaaatacaccaaaatagaaccttcttaaggttcctaaagcacaaatctcacagggcctataaaacaataacacaatg---aaaaaaaaa---------aaaggtattcaggcaacaaatggcatgatgaataaaaaagtacctcacatgtcaataccaacattgaatataaatggtctaattgctcaacttaagagatacagaatggcagaatggataaaaattcaccaagcaaggttctgctgtcttcaagagactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaataaacaccaagagccaacacaagtatctatttttatattagataaaacagactttaaagaaacagtagttaaaaagacaaagaagtacattatgtaatgataaaaggactagtccaacaggaaaatatcacaattctaaatatatatgcacctaacaccggagattccaaatttataaaacaattactactagacctaagaaatgagatagacagcatataata--------atagtggggactttaataccccactgactgaactcgcatcaagacagaaagtcaacaaagaaacaatggacttaaactata-ccttcaacaaacggacttaacagatatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacatagaacattctccaagatagaccatatgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactccttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacacggaaattaaatagtctgctcctaaatggtccttggagaaacaataaaatcaagatggatattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcaggtatagaggaaaagcagtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtcagaaagagcacacataggcaatctaaggtcataccttgaggagctacagaaacaagaacaaatcaaacccaaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaactggttcattgaaaagataaactaaaactaatagaacatgagtgaaattaaccaagacaagaagagagaagttccaaataagctcagttataaacaaaacaggaaataccacagaaatacagaagatcattcaaggctactataaacacttttatgtgcatgaact-aaaatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatagaaactctgaatagaccaataacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa---aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaacgatagagaaagagggactctccctaaattattttatggaaccagtgtcaccctactaccaaaaccaggaaagaacatgacaaaaaaagaaaactagagacaaacgtctctgatgaacattaatgcaaaaattctcaacaaaacattagctaaccaaatccaacagcatatcaaaaagataatccaccatgaatcaagttggtttcataccgaggatttaaagatagtttaatatacataaatcaataaacatgatgcaccacataagcagaatcaaaaagaaaaaaatcacatgatcatctcaatacacacagaaaagcatttgataaaatccaatatggctttatgattaaaactctcagtaaaactggtatagaagggacataccttaaagtaatagaagatatctatgacaaactcacagccaacattgtactgaatgggataatgttgaaagcattcccctgagaactttgacaagccaagaatgcccactttcaccacatctattcaacataatattggaagtcctaaccgaagcaatcagagaagaaaaatataaaggatatctaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgataccatcatataactagaaaactctgaagactcatccaaaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaTtgacagggacaggaggcagggaaattctgggtagaagaatgcaggtctccagtg-------agggccctgctgattctc-------accaaatccttggtctatcatggatagcttggtataattgagaggcttagttctagtcctccattatgcacacccgaaagtgtctcctcttccattctcccatctcatcattaggatctcatttagggtcatccagtggtactgtttctcttccacttggataaagtttgaccccctccctgacactatatgtgatacaaagctcgatccttcctggaaaggctaagaagggctttgataaagcacaactctctatctcctgattcagttgagggacaattaatccctaaatgtatttaaaagtagatgtattactaaaaaa-taagtgt-gttagtcaggcagccccttatagcaggaggaagttgcagaattgggccctgagaccagatagcactttagagaacctccttaaagtgaccaccttcatcttttataatagagatagggaaacccaagagagagagaggagacaaaggaaagaggcaggggatttaatggccaccgtgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtgctaagccaggaaattttaggaagaactccccaggcagcataaggaacccaccttgaccctgtccaatccataaaggggaccactggaaggtagactgtcaccggggacactagtaactgagtccagagtcaatcacccaaacgttccagcaggactgatggctcccagggttcctctttccagctccagtggtctggaccactattaccatccaggagccccaggtaattctggaaactgaagggaggaaagtggatctccctctgcacaccacggccggtctctcagttcccctctccaatctgag-----------------------ccc----cctctactctcttagcatgacttagtaaggagtgtctcaggaagtcctttaatccaatatttttctcaactccttaattgtagt---ttaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caaatcttctgttgggcaggaatattctgacctatatggggaccaccatcctgatggccacaggacaaactctttgtctttccctagtgaagactaatattatcccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccatactggtctgggtattacagtaccttaaggctctcacctcctttcctaaccagaaacaatatcccctgaaaccagaaattaggaaaggactagaagccgtcattgataac--aaagttgcagggccttctcaaaccctggaacagtcctttaataccccaatattgagggcacaaaaa-cccaatg-gggaatggagactagttcaggacctccacctcattaatgaggctgtggtttcagttcacctggtggttcccaatccacattccctactagctcaaatacctgagggaactaaatggttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaagcaaaccacccagttaacctgaatgatgttacctcagggaccctgagatggcccccacgtgtttggacaggcactgtcaagagaaccctctgagttactttatcctcaggttaaagttttacagtttatagatgacattcttctctgcacttcaactgaggaaacctctcaggagggcagtaaagctcttcttaattttctggctaacagagaatacaaattttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttctccaaaacactcaagaaacattacagga---ttaggcattacaggattctgcagactacggatacctgggtacagtgaataactcatcccttatatcaacgaataaaggagacttggctagctaaaactcactaatttgggaaccagaggcta i rheMac8.chr3 C 0 I 42 s macFas5.chr3 162181842 4682 - 192294377 tagcagaaaccctacaagctagaaggcattgaggt-ctatctttattctcctt-----aaaaaaaaaaa-------ttatcagccaagaatattgtatccagcaaaactaagcttcattaatgagcaaaagataaaatcttttttcaaacaaacaaatgctgagaggatttgtcactaccaaatgaatactaaaagaattactaaaaggagctccaaattttggaagaaattctcaaaatacaccaaaatagaaccttcttaaggttcctaaagcacaaatctcacagggcctataaaacaataacacaatg---aaaaaaaaa---------aaaggtattcaggcaacaaatggcatgatgaataaaaaagtacctcacatgtcaataccaacattgaatataaatggtctaattgctcaacttaagagatacagaatggcagaatggataaaaattcaccaagcaaggttctgctgtcttcaagagactcacctaacataaaaggatttacataaacttaaggttaaagggtagaaaaatatattccatgcaaataaacaccaagagccaacacaagtatctatttttatattagataaaacagactttaaagaaacagtagttaaaaagacaaagaagtacattatgtaatgataaaaggactagtccaacaggaaaatatcacaattctaaatatatatgcacctaacaccggagattccaaatttataaaacaattactactagacctaagaaatgagatagacagcatataata--------atagtggggactttaataccccactgactgaactcgcatcaagacagaaagtcaacaaagaaacaatggacttaaactata-ccttcaacaaacggacttaacagatatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacatagaacattctccaagatagaccatatgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactccttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacacggaaattaaatagtctgctcctaaatggtccttggagaaacaataaaatcaagatggatattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcaggtatagagcaaaagcagtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtcagaaagagcacacataggcaatctaaggtcataccttgaggagctacagaaacaagaacaaatcaaacccaaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaactggttcattgaaaagataaactaaaactaatagaacatgagtgaaattaaccaagacaagaagagagaagttccaaataagctcagttataaacaaaacaggaaataccacagaaatacagaagatcattcaaggctactataaacacttttatgtgcatgaact-aaaatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatagaaactctgaatagaccaataacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa---aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaacgatagagaaagagggactctccctaaattattttatggaaccagtgtcaccctactaccaaaaccaggaaagaacatgacaaaaaaagaaaactagagacatacgtctctgatgaacattaatgcaaaaattctcaacaaaacattagctaaccaaatccaacagcatatcaaaaagataatccaccatgaatcaagttggtttcataccgaggatttaaagatagtttaatatacataaatcaataaacatgatgcaccacataagcagaatcaaaaagaaaaaaatcacatgatcatctcaatacacacagaaaagcatttgataaaatccaatatggctttatgattaaaactctcagtaaaactggtatagaagggacataccttaaagtaatagaagatatctatgacaaactcacagccaacattgtactgaatgggataatgttgaaagcattcccctgagaactttgacaagccaagaatgcccactttcaccacatctattcaacataatattggaagtcctaaccgaagcaatcagagaagaaaaatataaaggatatctaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgataccatcatataactagaaaactctgaagactcatccaaaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaattgacagggacaggaggcagggaaattctgggtagaagagtgcaggtctccagtg-------agggccctgctgattctc-------accaaatccttggtctatcatggatagcttggtataattgagaggcttagttctagtcctccattatgcacacccgaaagtgtctcctcttccattctcccatctcatcattaggatctcatttagggtcatccagtggtactgtttctcttccacttggataaagtttgaccccctccctgacactatatgtgatacaaagctcgatccttcctggaaaggctaagaagggctttgataaagcacaactctctatctcctgattcagttgagggacaattaatccctaaatgtatttaaaagtagatgtattactaaaaaa-taagtgt-gttagtcaggcagccccttatagcaggaggaagttgcagaattgggccctgagaccagatagtactttagagaacctccttaaagtgaccaccttcatcttttataatagagatagggaaacccaagagagagagaggagacaaaggaaagaggcaggggatttaatggccaccgtgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtgctaagccaggaaattttaggaagaactccccaggcagcataaggaacccaccttgaccctgtccaatccataaaggggaccactggaaggtagactgtcaccggggacactagtaactgagtccagagtcaatcacccaaacgttccagcaggactgatggctcccagggttcctctttccagctccagtggtctggaccactattaccatccaggagccccaggtaattctggaaactgaagggaggaaagtggatctccctctgcacaccacggccggtctctcagttctcctctccaatctgag-----------------------ccc----tctctactctcttagcatgacttagtaaggagtgtctcaggaagtcctttaatccaatatttttctcaactccttaattgtagt---ttaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caaatcttctgttgggcaggaatattctgacctatatggggaccaccatcctgatggccacaggacaaactctttgtctttccctagtgaagactaatattatcccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccatactggtctgggtattacagtaccttaaggctctcacctcctttcctaaccagaaacaatatcccctgaaaccagaaattaggaaaggactagaagccgtcattgataac--aaagttgcagggccttctcaaaccctggaacagtcctttaataccccaatattgagggcacaaaaa-cccaatg-gggaatggagactagttcaggacctccacctcattaatgaggctgtggtttcagttcacctggtggttcccaatccacattccctactagctcaaatacctgagggaactaaatggttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaagcaaaccacccagttaacctgaatgatgttacctcagggaccctgagatggcccccacgtgtttggacaggcactgtcaagagaaccctctgagttactttatcctcaggttaaagttttacagtttatagatgacattcttctctgcacttcaactgaggaaacctctcaggagggcagtaaagctcttcttaattttctggctaacagagaatacaaattttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttctccaaaacactcaagaaacattacagga---ttaggcattacaggattctgcagactacggatacctgggtacagtgaataactcatcccttatatcaactaataaaggagacttggctagctaaaactcactaatttgggaaccagaggcta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8659847 4685 + 9440265 tagcagaaaccctacaagctagaagggattgaggt-ctatctttattctcctt----aaaaaaaaaaaa-------ttatcagccaagaatattgtatccagcaaaactaagcttcattaatgagcaaaagataaaatcttttttcaaacaaacaaatgctgagaggatttgtcactaccaaatgaatactaaaagaattactaaaaggagctccaaattttggaagaaattctcaaaatacaccaaaatagaaccttcttaaggttcctaaagcacaaatctcacagggcctataaaacaataacacaatg-----gaaaaaa---------aaaggtattcaggcaacaaatggcatgatgaataaaaaagtacctcacatgtcaataccaacattgaatataaatggtctaattgctcaacttaagagatacagaatggcagaatggataaaaattcaccaagcaaggttctgctgtcttcaagagactcacctaacataaaaggatttacataaacttaaggttaaagggtag-aaaatatattccatgcaaataaacaccaagagcca--acaagtatctatttttatattagacaaaacagactttaaagaaacagtagttaaaaagacaaagaagtacattatgtaatgataaaaggactagtccaacaggaaaatatcacaattctaaatatatatgcacctaacaccggagattccaaatttataaaacaattactactagacctaagaaatgagacagacagcatataata--------atagtggggactttaataccccactgactgaactcgcatcaagacagaaattcaacaaagaaacaatggacttaaactata-ccttcaacaaacggacttaacagatatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacatagaacattctccaagatagaccatatgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactccttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacacggaaattaaatagtctgctcctaaatggtccttggagaaacaataaaatcaagatggatattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcaggtatagagcaaaagcagtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtcagaaagagcacacataggcaatctaaggtcataccttgaggagctacagaaacaagaacaaatcaaacccaaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaactggttcattgaaaagataaactaaaactaatagaacatgagtgaaattaaccaagacaagaagagagaagttccaaataagctcagttataaacaaaacaggaaataccacagaaatacagaagatcattcaaggctactataaacacttttatgtgcatgaact-aaaatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatagaaactctgaatagaccaataacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa---aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaacgatagagaaagagggactctccctaaattattttatggcaccagtgtcaccctactaccaaaaccaggaaagaacatgacaaaaaaagaaaactagagacaaacatctctgatgaacattaatgcaaaaattctcaacaaaacattagctaaccaaatccaacagcatatcaaaaagataatccaccatgaatcaagttggtttcataccgaggatttaaagatagtttaatatacataaatcaataaacatgatgcaccacataagcagaatcaaaaagaaaaaaatcacatgatcatctcaatacacacagaaaagcatttgataaaatccaatatggctttatgattaaaactctcagtaaaactggtatagaagggacataccttaaagtaatagaagatatctatgacaaactcacagccaacattgtactgaatgggataatgttgaaagcattcccctgagaactttgacaagccaagaatgcccactttcaccacatctattcaacataatattggaagtcctaaccgaagcaatcagagaagaaaaatataaaggatatctaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgataccatcatataactagaaaactctgaagactcatccaaaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaattgacagggacaggaggcagggaaattctgggtagaagagtgcaggtctccagtgaatctccagggccctgctgattctc-------accaaatccttggtctatcatggatagcttggtataattgagaggcttagttctagtcctccattatgcacacccgaaagtgtctcctcttccattctcccatctcatcattaggatcccatttagggtcatccagtggtactgtttctcttccacttggataaagtttgaccccctccctgacactatatgtgatacaaagctcgatccttcctggaaaggctaagaagggctttgataaagcacaactctctatctcctgattcagttgagggacaattaatccctaaatgtatttaaaagtagatgtattactaaaaaa-taagtgt-gttagtcaggcagccccttatagcaggaggaagttgcagaattgggccctgagaccagatagtactttagagaacctccttaaagtgaccaccttcatcttttataatagagatagggaaacccaagagagagagaggagacaaaggaaagaggcaggggatttaatggccaccgtgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtgctaagccaggaaattttaggaagaactccccaggcagcataaggaacccaccttgaccctgtccaatccataaaggggaccactggaaggtagactgtcaccggggacactagtaactgagtccagagtcaatcacccaaacgttccagcaggactgatggctcccagggttcctctttccagctccagtggtctggaccactattaccatccaggagccccaggtaattctggaaactgaagggaggaaagtggatctccctctgcacaccacggccggtctctcagttctcctctccaatctgag-----------------------ccc----cctctactctcttagcatgacttagtaaggagtgtctcaggaagtcctttaatccaatatttttctcaactccttaattgtagt---ttaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caaatcctctgttgggcaggaatattctgacctatatggggaccaccatcctgatggccacaggacaaactctttgtctttccctagtgaagactaatattatcccagaagtttgggcaattcaagggaaaattggctgagccacaaccaccatactggtctgggtattacagtaccttaaggctctcacctcctttcctaaccagaaacaatatcccctgaaaccagaaattaggaaaggactagaagccgtcattgataac--aaagttgcagggccttctcaaaccctggaacagtcctttaataccccaatattgagggcacaaaaa-cccaatg-gggaatggaaactagttcaggacctccacctcattaatgaggctgtggtttcagttcacctggtggttcccaatccacattccctactagctcaaatacctgagggaactaaatggttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaagcaaaccacccagttaacctgaatgatgttacctcaggaaccctgagatggcccccacgtgtttggacaggcactgtcaagagaaccctctgagttactttatcctcaggttaaagttttacagtttatagatgacattcttctctgcacttcaagtgaggaaacctctcaggagggcagtaaagctcttcttaattttctggctaacagagaatacaaattttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaagcattaatcccatttcctcctttcctttctccaaaacactcaaggaacattacagga---ttaggcattacaggattctgcagactacggatacctgggtacagtgaataactcatcccttatatcaactaataaaggagacttgggtagctaaaactcactaatttgggaaccagaggcta i macNem1.NW_012019910v1 C 0 I 42 s cerAty1.NW_012002954v1 8390892 4671 + 21915920 tagcagaaaccctacaagctagaagggattgaggt-ctatctttatcctccttaaaaaaaaaaaaaaaa-------ttatcagccaagaatactgtatccagcaaaactaggcttcattaatgagcaaaagataaaatc-tttttcaaacaaacaaatgctgagaggatttgtaactaccaaatgaatactaaaagaattagtaaaaggagctccaaattttggaagaaattctcaaaatacaccaaaatagaaccttcttaaggttcttaaagcacaaatctcacagggcctataaaacaataacacaatg-----aaaaaaa---------aaaggtattaaggcaaaaaatggcatgatgaataaaaaagtacctcacatgtcaataccgacattgaatataaatggtctaattgctcaacttaagtgatacagaatggcagaatggataaaaattcaccaaggaaggttctgctgtcttcaagagactcacctaacaaaaaaggatttacatcaacttaaggttaaagggtagaaaaatatattccatgcaaataaacaccaaaagccaacagaagtatctattcttatattagacaaaacagactttaaagaaacagtagttaaaaagacaaagaagtacattatgtaatgataaaaggattagtccaacaggaaaatatcacaattctaaatatatatgcacctaacactggagattccaaatttatgaaacaattactactagacctaagaaatgagatagacagcatataata--------atagtggggactttaat-ccccactgactgaattctcatcaagacagaaagtcaacaaagaaacaatggacttaacctata-ccttcaacaaatggacttaacagatatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacatagaacattctccaagatagaccatacgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaaatactccttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcacatacaaggaaattaaatagtctgctcctaaatggtccttggagaaacaataaaaccaagatggatattaaatatttgtttgaactgaatgataataatgacacaacctcacaaaacctcaggtatagagcaaaagcagtgctaaaaggaaagttcatagcattaaatgtctacatctaaaagtcagaaacagcacacataggcaatctaaagtcacacctttaggaactatagaaacaagaacaaat------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaacttgttcattgaaaagataaactaaaactagtagaacactagtgagattaaccaagacaagaagagagaagttccaaataagctcagttataaacaaaacaggaaataccacagaaatacagaagatcattcaaggctactataaacacttttatgtgcatgaact-aaaatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatggaaactctgaatagaccaataacaaatagcaagattgaaatggtaatttaaaaattgccaacaaaaa---aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaatgatagagaaagtgggactctccctaaattattttatggaaccagtgtcaccctactaccaaaaccaggaaaga-----acaaaaaaagaaaactagagacaaacatctctgatgaacattaatgcaaaaattctcaacaaaacattagctaaccaaatccaacagcatatcaaaaagataatccaccatgaatcaagttggtttcataccaaggatttaaagacagtttaatatacataaatcaataaacatgatgcacatcataagcagaatcaaaaag-aaaaaatcacatgatcatctcaatagacacagaaaagcatttgataaaatccaatatggctttatgattaaaactctcagtaaaactggtatagaagggacataccttaaagtaatagaagatatctatgacaaactcacagccaacattgtactgaatgggataatgttaaaagcattcccctgagaactttgacaagccaagaatgcccactttcaccacttctattcaacataatattggaagtcctaaccgaagcaatcagagaagagaaaaataaaggatatccaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgatatcatcatataactagaaaaccctgaagattcatccagaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaattgatagggacaggaggcagggaaattctgggtagaagagtgtgggtccccagtg-------agggcccTGCTgattctc-------accaaatacttggtctatcatggatagcttggtataattgagaggcttaattctagtcctccattatgcacagccgaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccagtggtactgtttctcttccagttggataaagtttgaccccctccctgacactatatgtgatacaaagctcgatccttcctggaaaggctaagaagggctttgataaagcacaactctctatctcctgattcagttgagggacaattaatccctaaatgtatttaaaagtagatgtattactaaaaaa-taagtgt-gttagtcaggcagccccttatagcaggaggaagttgcagaaatgggccctgagaccaaatagtactttagagaacctcctgaaagtgaccaccttcatcttttataatagagatagggaaacccaagagagagagaggagacaaaggaaagaggcaggggatttaatggccaccgtgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtgctaagccaggaaattttaggaagaactccccaggcagcataaggaacccaccttgaccctgtccaatccataaaggggaccactggaaggtggactgtcaccggggacactagtaactgagtccagagtcaatcgcccaaacattccagcaggactgatggctcccagggttcctcttcccagctccagtggtctggaccactattaccatccaggagccccaggtaattctggaaactgaagggaggaaagtggatctccctctgcacaccacggctggtctctcggttctcctctccaatctgag-----------------------ccc----cttctactctcttagcatgacttagtaaggggtgtctcaggaagtcctttaatctaatatttttctcaactccttaattgtagt---ttaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caaattctctgttgggcaggaatattctgacctatatggggaccaccatcctgatggccacaggacaaactctttgtctttccctagtggagactaatattatcccagaagtttgggcaattcaaggtaaaattggctgagccacaaccaccatactggtctgggtattacagtaccttaaggctctcacctcctttcctaaccagaaacaatatcccctgaaaccagaaattaggaaaggactagaagccatcattgataac--aaagttgcagggccttctcaaaccctggaacagtcctttaataccccaatattgagggcacaaaaa-cccaatg-gggaatggagaccagttcaggacctccacttcattaatgaggctgtggtttcagttcacctggtggttcccaatccacattccctactagctcaaacacctgagggaactaaatggttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttgtttgcatttgaggatcccgccaagcaaaccacccagttaacctgaatgatgttacctcagggaccctgagatggcccccacgtgtttggacaggcactgtcaagagaaccctctgagttactttatcctcaggttaaagttttacagtttatagatgacattcttctctgcacttcaactgaggaaacctctcaggagggcagtaaagctcttcttaattttctggctaacagagaatacaaattttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttctccaaaacactcaagcaacattacagga---ttaggcattacaggattctgcagactacagatacctgggtacagtgaataactcatcccttatatcaactaataaaggagacttgggtagctaaaactcactaatttgggaaccagaggcta i cerAty1.NW_012002954v1 C 0 I 42 s chlSab2.chr2 14967315 4683 - 90373283 tagcagaaaccctacaagctagaagggattgaggt-ctatctttatcttcctt----aaaaaaaaaaaa-------ttatcagccaagaatattgtatccagcaaaactaagcttcattaatgaacaaaagataaaaccttttttcaaacaaacaaatgctgagaggatttgtcactaccaaatgaatactaaaagaattactaaaaggagctccaaattttggaagaaattctcaaaatacaccaaaatagaaccttcttaaggttcctaaagcacaaatctcacagggcctataaaacaataacacaatgaaaaaaaaaaaa---------aaaggtatacaggcaacaaatggcatgatgaataaaaaagtacctcacatgtcaataccaacattgaatataaatggtctaattgctcaacttaagagatacagaat-gcagaatggataaaaattcaccaagcaaggctctgctgtcttcaagagactcacctaacataaaaggatttacataaacttaagattaaagggtagaaaaatatattccatgcaaataaacaccaaaagccaacagaagtatctatttttatattagacaaaacagactttaaagaaacagtagttaaaaagacaaagaagtacattatgtaatgataaaaggactagtccaacaggaaaatatcacaattctaaatatatatgcacctaacactggagattccaaatttataaaacaattactactagacctaagaaatgagataaacagcatataataatagtgggatagtggggactttaataccccactgactgaactcacatcaagacagaaagtcaacaaagaaacaatggacttaaactata-ccttcaacaaatggacttaacagatatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacattgaacattctccaagatagaccatatgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaagtactccttcagaccacagtggaataaaattggaaatcaactccaaagggaaccctcaaaaacatgcaaatacaaggaaattaaatagtctgctcctaaatggtccttggagaaacaataaaatcaagatggatattaaaaatttgtttgaactgaatgataataatgacacaacctaacaaaacctcaggtatagagcaaaagcagtgctaaaaggaaagttcatagcattaaatgtctacatcaaaaagtcagaaagagcacacataggcaatctaaggtcataccttgaggagctacagaaacaagaacaaat------caaacccaaacccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaactggttcattgaaaagataaactaaaactaatagaacattagtgagattaaccaagacaagaagagagaagttccaaataagctcagttataaacaaaacaggaaataccacagaaatacagaagatcattcaaggctactataa--acttttatgtacatgaact-aaaatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatagaaactctgaatagaccaataacaaatagcaagattgaaatggtaattttaaaattgccaac-aaaa---aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaatgatagagaaagagggactctccctaaattattttatggaaccagtgtcaccctactaccaaaaccaggaaataatgtaacaaaaaaagaaaactagagacaaacgtctctgatgaacattaatgcaaaaattctcaacaaaacattagctaatgaaatccaacagcatatcaaaaagataatccaccatgaatcaagttggtttcataccgaggatttaaagatagtttaatatacataaatcaataaacatgatgcaccacataagcagaatcaaaaagaaaaaaatcacatgatcatctcaatagacacagaaaagcatttgataaaatccaatatggctttatgattaaaactctcagtaaaactggtatagaaggg-tataccttaaagtaatagaagatatctatgacaaactcacagccaacattgtactgaatggaataatgttgaaagcattcccctgagaactttgacaagccaagaatgcccactttcaccacttctattcaacataatattggaagtcctaaccgaagcaatcagagaagagaaaaataaaggatatccaaatcagtaaagatgaagtcaaactgttgctgttcaccaatgatatcatcatataactagaaaaccctgaagactcatccaaaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccaagggcaaccaagctgagaatcaaTtgatagggacaggaggcagggaaattctgggtagaagagtgcaggtctccattg-------agggcccTGCTgattctc-------accaaatacttggtctatcatggatagcttggtataattgagaggcttagttctagccctccattatgcacagcggaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccagtggtactgtttctcttccagttggataaagtttgaccccctccctgacactatacgtgatacaaagctcgatccttcctggaaaggctaagaagggctttgataaagcacaactctctatctcctgattcagttgagggacaattaatccctaaatgtatttaaaagtagatgtattactaaaaaa-taagtgt-gttagtcaggcagccccttatagcaggaggaagttgcagaaatgggccctgagaccagatagtactttagagaacctcctgaaagtgaccaccttcatcttttataatagagatagggaaacccaagagagagagaggagacaaaggaaagaggcaggggatttaatggccactgtgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaattttaggaagaactccccaggcagcataaggaacccacattgaccctgtccaatccataaaggggacccctggaaggtagactgtcaccggggacactagtaactgagtccagagtcaattgcccaaatgttccagcaggactgatggctcccagggttcctctttccagcttcagtggtccggaccactattaccatccaggagccccaggtaattctggaaactgaagggaggaaagtggatctccctctgcacaccacagctggtctctcggttctcctctccaatctgag-----------------------ccc----cctctactctcttagcatgacttagtaaggggtgtcgcaggaagtcctttaatccaatatttttctcaaccccttaattgtagt---ttaggagacctcttgttcacccatgcctttctaatta-gcctgaaagca-caaatcctctgttgggcaggaatattctgacctatatggggaccaccatcctgctggccacaggacaacctctttgtctctccctagcggagactaatattatcccagaagtttgggcaattcaagggaaaattggctgagccacaatcaccatactggtctgggtattacggtaccttaaggctgtcacctcctttcctaaccagaaaaaatatcccctgaaaccagaagttaggaaaggactagaagccatcattgataacttaaagttgcagggccttctcaaaccctggaacagtcctttaacaccccaatattgagggcac-aaaa-cccaatg-gggaatggagactagttcaggacctccacctcattaatgaggctgtggtttcaattcacctggtggttcccaatccacattccctactagcttaaatacctgagggaactaaatggttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttttttgcatttgaggatccctccaagcaaaccacccagttaacccgaatgatgttacctcagcgaccctgagaaggcccccacgtgtttggacaggcattgtcaagagaaccctctgagttactttatcctcaggttaaagttttacagtttatagatggcattcttctctgcacttcaactgaggaaacctctcaggagggcagtaaagctcttcttaattttctggctaacagagaatacaaattttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcactgagcaaagaaaggattaatcccatttcctcctttcctttctccaaaacactcaagcaacattacagga---ttaggcattacaggattctgcagactacggatacctgggtacagtgaataactcatcccttatattaactaataaaggagacttgggtggctaaaactcactaatttgggaaccagGggcta i chlSab2.chr2 C 0 I 42 s manLeu1.NW_012102865v1 2134958 4672 + 4234846 tagcagaaaccctacaagctagaagggattgaggt-ctatctttatcctcctt-aaaaaaaaaaaaaaa-------ttatcagccaagaatactgtatccagcaaaactaagcttcattaatgagcaaaagataaaatc-tttttcaaacaaacaaatgctgagaggatttgtaactaccaaatgaatactaaaagaattagtaaaaggagctccaaattttggaagaaattctcaaaatacaccaaaatagaaccttcttaaggttcttaaagcacaaatctcacagggcctataaaacaataacacaatg------aagaaa---------aaaggtattaaggcaaaaaatggcatgatgaataaaaaagtacctcacatgtcaataccgacattgaatataaatggtctaattgctcaacttaagagatacagaatggcagaatggataaaaattcaccaaggaaggttctgctgtcttcaagagactcacctaacaaaaaaggatttacatcaacttaaggttaaagggtagaaaaatatattccatgcaaataaacaccaaaagccaacagaagtatctattcttatattagacaaaacagactttaaagaaacagtagttaaaaagacaaagaagtacattatgtaatgataaaaggattagtccaacaggaaaatatcacaattctaaatatatatgcacctaacactggagattccaaatttatgaaacaattactactagacctaagaaatgagatagacagcatataata--------atagtggggactttaataccccactgactgaattctcatcaagacagaaagtcaacaaagaaacaatggacttaacctata-ccttcaacaaatggacttaacagatatttacagaacattcta--cccaatgattgcagaatatacattctattcatcagcacatagaacattctccaaaatagaccatacgatagaccacaaaacaagtctcaataaatttaagaaaatcaaaattataccaaatactccttcagaccacagtggaataaaattggaaatcaactccaaagggaaccttcaaaaacatgcacatacaaggaaattaaatagtctgctcctaaatggtccttggagaaacaataaaaccaagatggatattaaaattttgtttgaactgaatgataataatgacacaacctcacaaaacctcaggtatagagcaaaagcagtgctaaaaggaaagttcatagcattaaatgtctacatctaaaagtcagaaagagcacacataggcaatctaaagtcacacctttaggaactatagaaacaagaacaaat------caaacccaaatccaaaccctacagaagaaaagaaataacaaagatcagagcaaaactaagtgaaattgaaacaaaaataaatacaaaagataaatgaaagaaaaaacttgtttattgaaaagataaactaaaactagtagaacactagtgagattaaccaagacaagaagagagaagttccaaataagctcagttataaacaaaacaggaaataccacagaaatacagaagatcattcaaggctactataaacacttttatgttcatgaact-aaaatcctagaggaaatggataaattcctggaaatataaaaccctcctagattaaaacaggaagaaatggaaactctgaatagaccaataacaaacagcaagattgaaatggtaatttaaaaattgccaacaaaaa---aaaagtctaggaccagatggattcacagctgaattctatcagacattca---aagatttgataccaatcctattgaaactattccaaatgatagagaaagagggactctccctaaattattttacggaaccagtgtcaccctactaccaaaaccaggaaagaacataacaaaaaaagaaaactagagacaaacgtctctgatgaacattaatgcaaaaattctcaacaaaacattagctaaccaaatccaacagcatatcaaaaagataatccaccatgaatcaagttggtttcataccaaggatttaaagacagtttaatatacataaatcaataaacatgatgcacatcataagcagaatcaaaaag-aaaaaatcacatgatcatctcaatagacacagaaaagcatttgataaaatccaatatggctttatgattaaaactctcagtaaaactggtatagaagggacacaccttaaagtaatagaagatatctatgacaaactcacagccaacattgtactgaatgggataatgttgaaagcattcccctgagaactttgacaagccaagaatgcccactttcaccacttctattcaacataatattggaagtcctaaccgaagcaatcagagaagagaaaaataaaggatatctaaatcggtaaagatgaagtcaaactgttgctgttcaccaatgatatcatcatataactagaaaaccctgaagactcatccaaaaagctcctaggtctgataaatgaattcagtaaagtttcaggatacaaaatcaatgtacacaaatcagtagcactgctatacaccatgggcaaccaagctgagaatcaattgatagggacaggaggcagggaaattctgggtagaagagtgtgggtccccagtg-------agggcccTGCTgattctc-------accaaatacttggtctatcatggatagcttggtataattgagaggcttaattctagtcctccattatgcacagccgaaagtgtctcctcttccattctcccatctcatcattgggatcccatttagggtcatccagtggtactgtttctcttccagttggataaagtttgactccctccctgacactatatgtgatacaaagctcgatccttcctggaaaggctaagaagggctttgataaagcacaactctctatctcctgattcagttgagggacaattaatccctaaacgtatttaaaagtagatgtattactaaaaaa-taagtgt-gttagtcaggcagccccttatagcaggaggaagttgc---aatgggccctgagaccagatagtactttagagaacctcctgaaagtgaccaccttcatcttttataatagagatagggaaacccaagagagagagaggagacaaaggaaagaggcaggggatttaatggccaccgtgcaagcccacaaacccagaatccctgaggtgcacctcttaactgctacagatgtggtaagccaggaaatcttaggaagaattccccaggcagcataaggaacccaccttgaccctgtccaatccataaaggggaccactggaaggtggactgtcaccggggacactagtaactgagtccagagtcaatcgcccaaacgttccagcaggactgatggctcccagggttcctcttcccagctccagtggtctggaccactattaccatccaggagccccaggtaattctggaaactgaagggaggaaagtggatctccctctgcacaccacggctggtctctcggttctcctctccaatctgag-----------------------ccc----cctctactctcttagcatgacttagtaaggggtgtctcaggaagtcctttaatctaatatttttctcaactccttaattgtagt---ttaggagacctcttgttcacccatgcctttctaattatgcctgaaagca-caaatcctctgttgggcaggaatattctgacctatatggggaccaccatcctgatggccacaggacaaactctttgtctttccctagtggagactaatattatcccagaagtttgggcaattcaaggtaaaattggctgagccacaaccaccatactggtctgggtattacagtaccttaaggctctcacctcctttcctaaccagaaacaatatcccctgaaaccagaaattaggaaaggactagaagccatcattgataac--aaagttgcagggccttctcaaaccctggaacagtcctttaataccccaatattgagggcacaaaaa-cccaatg-gagaatggagactagttcaggacctccacctcattaatgaggctatggtttcagttcacctggtggttcccaatccacattccctactagctcaaatacttgagggaactaaatggttcacagtcccagacctaaaggatgccttcttctgcataccattgcaccccaactcccaatatttgtttgcatttgaggatccctccaagcaaaccacccagttaacctgaatgatgttacctcagggaccctgagatggcccccacgtgtttggacaggcactgtcaagagaaccctctgagttactttatcctcaggttaaagtttcacagtttatagatgacattcttctctgcacttcaactgaggaaacctctcaggagggcagtaaagctgttcttaattttctggctaacagagaatacaaattttcaaaatctaaagctcagctctgtcagacttaagtgaagtacctaggtctggtcttggcagagtggaccagggcattgagcaaagaaaggattaatcccatttcctcctttcctttctccaaaacactcaagcaacattacagga---ttaggcattacaggattctgcagactacggatacctgggtacagtgaataactcatcccttatatcaactaataaaggagacttgggtagctaaaactcactaatttgggaaccagaggcta i manLeu1.NW_012102865v1 C 0 I 42 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=87982.000000 s hg38.chr21_KI270874v1_alt 36392 104 + 166743 gaaaagcctttgaccaactgaaacaagccttgcttaaggcaatactccttagtcttccca-tagggaagatgtttaatctttatacctcagaaggaaagggaatg s panTro5.chr21 3660897 104 + 33445071 gaaaagcctttgaccaactgaaacaagccttgcttaaggcaatactccttagtcttccca-tagggaagatgtttaaactttatacctcagaaggaaagggaatg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17287819 104 + 46275980 gaaaagcctttgaccaactgaaacaagccttgcttaaggcaatactccttagtcttccca-tagggaagatgtttaaactttatacctcagaaggaaagggaatg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3226877 104 - 13858734 gaaaagcctttgaccaactgaaacaagccttgcttgaggcaatactccttagtcttccca-tagggaagatgtttaatctttatacctcagaaggaaagggaatg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4409100 104 + 32716333 gaaaagcctttgaccaactgaaacaagccttgcttaaggcaatactccttagtcttccca-tagggaagatgtttaatctttatacctcagaaggaaagggaatg i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162186524 42 - 192294377 -------------------------------------------atttttttgtatttttagtagagacggggtttcaccatgtta-------------------- i macFas5.chr3 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8395563 42 + 21915920 I e macNem1.NW_012019910v1 8664532 42 + 9440265 I e manLeu1.NW_012102865v1 2139630 42 + 4234846 I e chlSab2.chr2 14971998 42 - 90373283 I e rheMac8.chr3 155363826 42 - 185818997 I a score=579985.000000 s hg38.chr21_KI270874v1_alt 36496 116 + 166743 gccttgggagttctaacccacatctggggtccagcccagaaacctgtaggctacctaggtaaggagcttgattttgtagccaaaggagagctggcttgcctccaggcagttgcagc s panTro5.chr21 3661001 116 + 33445071 gccttgggagttctaacccacatctggggtccagcccagaaacctgtaggctacctaagtaaggagcttgattttgtagccaaaggagagctggcttgcctccaggcagttgcagc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17287923 116 + 46275980 gccttgggagttctaacccacatctggggtccagcccagaaacctgtaggctacctaagtaaggagcttgattttgtagccaaaggagagctggcttgcctccaggcagttgcagc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3226981 116 - 13858734 gccttgggagttctaacccacatctggggtccagcccagaaacctgtaggctacctaagtaaggagcttgattttgtagccaaaggagagctggcttgcctccaggcagttgcagc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4409204 116 + 32716333 gccttgggagttctaacccccatctggggtccagcccagaagcctgtaggctacctaagtaaggagcttgattttgtagccaaaggagagctcgcctgcctccaggcagttgcagc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155363868 116 - 185818997 gccttgggagttctaacccacatctgtggtccagcccagaagcctgtaggctacctaagtaaggagctcgattttgtagccaaaggacagctggcctgcctccaggcagttgcagc i rheMac8.chr3 I 42 I 25 s macFas5.chr3 162186566 116 - 192294377 gccTtgggagttctaacccacatctgtggtccagcccagaagcctgtaggctacctaagtaaggagcttgattttgtagccaaaggacagctggcctgcctccaggcagttgcagc i macFas5.chr3 C 0 I 9 s macNem1.NW_012019910v1 8664574 116 + 9440265 gccttgggagttctaacccacatctgtggtccagcccagaagcctgtaggctacctaagtaaggagcttgattttgtagccaaaggacagctggcctgcctccaggcagttgcagc i macNem1.NW_012019910v1 I 42 I 25 s cerAty1.NW_012002954v1 8395605 116 + 21915920 gccttgggagttctaacccacatctgtggtccagcccagaagcctataggctacctaagtaaggagcttgattttgtagccaaaggacagctggcgtgcctccaggcagttgcagc i cerAty1.NW_012002954v1 I 42 I 25 s chlSab2.chr2 14972040 116 - 90373283 gccTtgggagttctaacccacatctgtggtccagcccagaagcctgtaggctacctaagtaaggagcttgattttgtagccaaaggacagctggcctgcctccaggcagttgcagc i chlSab2.chr2 I 42 I 25 s manLeu1.NW_012102865v1 2139672 116 + 4234846 gccttgggagttctaacccacatctgtggtccagcccagaagcctataggctacctaagtaaggagcttgattttgtagccaaaggacagctggcgtgcctccaggcagttgcagc i manLeu1.NW_012102865v1 I 42 I 25 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=9125.000000 s hg38.chr21_KI270874v1_alt 36612 8 + 166743 agtagcct s panTro5.chr21 3661117 8 + 33445071 agtagcct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17288039 8 + 46275980 agtagcct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3227097 8 - 13858734 agtagcct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4409320 8 + 32716333 agtagcct i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162186691 8 - 192294377 aatgtcct i macFas5.chr3 I 9 I 8 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I e cerAty1.NW_012002954v1 8395721 25 + 21915920 I e macNem1.NW_012019910v1 8664690 25 + 9440265 I e manLeu1.NW_012102865v1 2139788 25 + 4234846 I e chlSab2.chr2 14972156 25 - 90373283 I e rheMac8.chr3 155363984 25 - 185818997 I a score=1170269.000000 s hg38.chr21_KI270874v1_alt 36620 244 + 166743 ttctggttaccagaggttactgagttaaccatagggaataacttaaccatctatactctgcataatgtggcaggactttggttttctaaggggagtctctggctaatgaataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacaaggacctgtccatccctaaattcagccaccttcctcccaggggaagctgagagcttgaacatgactgtgaacagatagt s panTro5.chr21 3661125 244 + 33445071 ttctggttaccagaggttactgagttaaccatagggaataacttaaccatctatactctgcataatgtggcaggactttggttttctaaggggagtctctggctaatggataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacaaggacctgtccatccctaaattcagccaccttcctcccaggggaagctgggagcttgaacatgactgtgaacagatagt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17288047 244 + 46275980 ttctggttaccagaggttactgagttaaccatagggaataacttaaccatctatactctgcataatgtggcaggactttggttttctaaggggagtctctggctaatggataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacaaggacctgtccatccctaaattcagccaccttcctcccaggggaagctgagagcttgaacatgactgtgaacagatagt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3227105 243 - 13858734 ttctggttaccagaggttactgagttaaccatacggaataacttaaccatctatactctgcataatgtggcaggactttgattttctaaggggagtctctggctaatggataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacaaggacctgtccatccctaaattcagccacctt-ctcccaggggaagctgagagcttgaacatgactgtgaacagatagt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4409328 244 + 32716333 ttctggtcagcagaggttactgagttaaccatagggaataacataaccatctatactctgcataatgtggcaggactttggtcttctaaggggagtctctggctaatggataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacgagaagctgtccatccctaaattcagccaccttcctcccaggggaagctaagagcttgaacatgactgtgaacagatagt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155364009 243 - 185818997 tcctggt-accagaggttactgagttaaccacagggaataacttaaccatctatactctgcataatgttgcaggactttggtcttctaaggggagtctctggctaagggataacggcctcctcaggtatcaaactctgctattagagggatctgcagtccaaacaagaacctgtccctccctaaattcagccaccttcctcccaggggaagctgagagctggaacatgattgtgaagagatagt i rheMac8.chr3 I 25 C 0 s macFas5.chr3 162186707 243 - 192294377 tcctggt-accagaggttactgagttaaccacagggaataacttaaccatctatactctgcataatgttgcaggactttggtcttctaaggggagtctctggctaagggataacggcctcctcaggtatcaaactctgctattagagggatctgcagtccaaacaagaacctgtccctccctaaattctgccaccttcctcccaggggaagctgagagctggaacatgattgtgaagagatagt i macFas5.chr3 I 8 C 0 s macNem1.NW_012019910v1 8664715 243 + 9440265 tcctggt-accagaggttactgagttaaccacagggaataacttaaccatctatactctgcataatgttgcaggactttggtcttctaaggggagtctctggctaagggataacggcctcctcaggtatcaaactctgctattagagggatctgcagtccaaacaagaacctgtccctccctaaattcagccaccttcctcccaggggaagctgagagcttgaacatgattgtgaagagatagt i macNem1.NW_012019910v1 I 25 C 0 s cerAty1.NW_012002954v1 8395746 243 + 21915920 tcctggt-accagaggttactgagttaaccacagggaataacttaaccgtctatactctgcataatgttgcaggactttggtcttctaaggggagtctctggctaagggataactgcctcctcaggtatcaagctctgctattagagggatctgcagtccaaacaagaacctgtccctccctaaattcagccaccttcctcccaggggaagctgagagcttgaacatgattgtgaagagatagt i cerAty1.NW_012002954v1 I 25 C 0 s chlSab2.chr2 14972181 243 - 90373283 tcctggt-accagaggttactgagttaaccacagggaataacttaaccatctatactctgcataatgttgcaggactttggtcttccaaggggagtctctggctaagggataactgcctcctcaggtatccaactctgctattagagggatctgcagtccaaacaagaacctgtccctccctatattcaaccaccttcctcccaggggaagctgagagcttgaacatgattgtgaagagatagt i chlSab2.chr2 I 25 C 0 s manLeu1.NW_012102865v1 2139813 243 + 4234846 tcctggt-accagaggttactgagttaaccacagggaataacttaaccatctatactctgcattatgttgcaggactttggtcttctaaggggagtctctggctaagggataactgcctcctcaggtatcaaactctgctattagagggatctgcagtccaaacaagaacctgtccctccctaaattcagccaccttcctcccaggggaagctgagagcttgaacatgattgtgaagagatagt i manLeu1.NW_012102865v1 I 25 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 130466 16261 - 13750039 I a score=7777775.000000 s hg38.chr21_KI270874v1_alt 36864 1362 + 166743 agtatccagccagagagggcctctaggaaacccccttagagaacccagacaaaattctctttatgagtggaaattcttttgtaaaacaagagatccataaagcatggtatgctatagttattctgactgatatttttgagagctcgtctctctcctcgggaacaagagctcaactagctgagctcattgccctcacgagggcactcaaattaagcaaagggaaagcagttaacatttacgctgattctaagtatcctttcctagacctccatgcccatgctgctatctggaaagagagaaactttctcacagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtagcagtaacacaatgtgaaggcccccaaaaggaatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactggtctgggagggcctcataggagaaataaaacttcagtattctcctatggaaatagaatggggcacctcttggggttacatctttcagtcctcaggatggccacaattggaggatgccaagcttcatctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaagataaaacctttcaaatggttcagagattgttctcaggtaaaaacctgacacaaatagttaaacaggttgttaatgcttgcaagatttgccttaaaaatcatcccttcagctgaccacttctgcacccaggaactcaaaggacagcagg----ctgagggaaaactagcaaatggatttcacccatatgtcaaaggtaaggggcatccagtaccttctagaatgaacagataccttcactaactgggtagagccatttccatgtgggacaaagaaagcctccaaggtggtaaaagtactgattaatgagataattccttgccctggcctgcctaagcaacttcagagagataatggcctctcattcaaggcagctgtgaccca-g--ggggggtcacaaaggcactaggaatacactaccatcttcattgtgcttggagaccacgatgctcaggaaagatagaaaagacaaatgatattataaaaaaggcacctcagaaaactatctccctcagactaatcttccctagactaaccttctcaccatagctctactacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgatttgct s panTro5.chr21 3661369 1364 + 33445071 agtatccagccagagagggcctctaggaaacccccttagagaacccagacaaaattctctttatgagtggaaattcttttgtaaagcaagagatccataaagcatggtatgctatagttactctgactgatatttttgagagctcgtctctctcctcgggaacaagagctcaactagctgagctcattgccctcacgagggcactcaaattaagcaaagggaaagcagttaacatttacgctgattctaagtatcctttcctagacctccatgcccatgctgctatctggaaagagagaaactttctcacagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtagcagtaacacaatgtgaaggcccccaaaaggaatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactggtctgggagggcctcgtaggagaaataaaacttcagtattctcctatggaaatagaatggggcacctcttggggttacatctttcagtcctcaggatggccacaattggaggatgccaagcttcatctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaagataaaacctttcaaatggttcagagattgttctcaggtaaaaacctgacacaaatagttaaacaggttgttaatgcttgcaagatttgccttaaaaatcatcccctcagctgaccacttctgcacccaggaactcaaaggacagcagg----ctgagggaaaactagcaaatagatttcacccatatgtcaaaggtaaggggcatccagtaccttctagaatgaacagataccttcactaactgggtagagccatttccatgtgggacaaagaaagcctccgaggtgataaaagtactgattaatgagataattcctttccctggcctgcctaagcaacttcagagagataatggcctctcattcaaggcagctgtgaccca-gcgggggggtcacaaagacactaggaatacactaccatcttcattgtgcttggagaccacaatactcaggaaagatagaaaagacaaatgatattataaaaaaagcacctcagaaaactatctccctcagactaatcttccctagactaaccttctcaccatagctctactacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgatttgct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17288291 1361 + 46275980 agtatccagccagagagggcctctaggaaacccccttagagaacccagacaaaattctctttatgagtggaaattcttttgtaaaacaagagatccataaagcatggtatgctatagttactctgactgatatttttgagagctcgtctctctcctcgggaacaagagctcaactagctgagctcattgccctcatgagggcactcaaattaagcaaagggaaagcagttaacatttacgctgattctaagtatcctttcctagacctccatgcccatgctgctatctggaaagagagaaactttctcacagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtagcagtaacacaatgtgaaggcccccaaaaggaatggataaagtaactgagggaaatagtttggaagactaagcagctaagtcagcagagacagggcctcagatttctgatccacttgaagccccactggtctgggagggcctcgtaggagaaataaaacttcagtattctcctatggaaatagaatggggcacctcttggggttacatctttcagtcctcaggatggccacaattggaggatgccaagcttcatctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaagataaaacctttcaaatggttcagagattgttctcaggtaaaaacctgacacaaatagttaaacaggttgttaatgcttgcaagatttgccttaaaaatcatcccctcagctgaccacttctgcacccaggaactcaaaggacagcagg----ctgagggaaaactagcaaatagatttcacccatatgtcaaaggtaaggggcatccagtaccttctagaatgaacagataccttcactaactgggtagagccatttccatgtgggacaaagaaagcctccgaggtgataaaagtactgattaatgagataattcctttccctggcctgcctaagcaacttcagagagataatggcctctcattcaaggcagctgtgacccg-g--ggggggtcacaaagacactaggaatacactaccatcttcattgtgcttggagaccacaatactcaggaaagatagaaaagacaaatgatattataaaaaa-gcacctcagaaaactatctccctcagactaatcttccctagactaaccttctcaccatagctctactacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgattcgct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3227348 1361 - 13858734 agtatccagccagagagggcctctaggaaacccccttagagaacccagacaaaattctctttatgagtggaaattctttggtaaaacaagagatccataaagcatggtatgctatagttactctgactgatatttttgagagctcgtctctctcctcgggaacaagagctc-actagctgagctcattgccctcatgagggcactcaaattaagcaaagggaaagcagttaacatttacgctgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagagagaaactttctcacagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtagcagtaacacaatgtaaaggcccccaaaaggaatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactggtctgggagggcctcataggagaaataaaacttcagtattctcctatggaaatagaatggggcacctcttggggttacatctttcagtcctcaggatggctacaattggaggatgccaagcttcatctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaagataaaacctttcaaatggttcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgttaatgcttgcaagatttgccttaaaaatcatcccctcaactgaccacttctgcacccaggaacccaaaggacagcagg----ctgagggaaaactggcaaatagatttcacccatatgtcaaaggtaaggggcatccagtaccttctagaatgaacagataccttcactaactgggtagagccatttccatgtgggacaaagaaagcctctgaggtgataaaagtactgattaatgagataattccttgccttggcctgcctaagcaccttcagagagataatggcccctcattccaggcagctgtgacccg-g--ggggggtcacaaagacactaggaatacactaccatcttcattgtgcttggagaccacaatgctcaggaaagatagaaaagacaaatgatattataaaaaaggcacctcagaaaactatctccctcagactaatcttccctagactaaccttctcaccatagctctattacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgatttgct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4409572 1359 + 32716333 agtatccagccagagagggcatctaggaaacccccttagagaacccagacaaaattctctttacgaatggaaattcatttgtaaaacaagagatccataaaacatggtatgctatagttactctgattgatatttttgaaagcttgtctctctcctcgggcacaagagctcaactagctgagctcgttgccctcacgagggcactcaaattaagcaaagtgaaagcagttaacatttacactgattctaagtatccttccctagacctcaatgcccatgctgctatctggaaagagaggaactttctcacagctaatgggtctcccattaaataccaacaggaaattaattgactatcatcctcagttttcatcccataggaagtggcagtaacacaatgtaaaggcccccaaaaggaatggataaagtaactgagggaaatgggttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactgatctgggaggacctcataggagaaataaaacttcagtattctcctatggaaatagaatggggcacctcttggggatacatctttcagtcctcaggatggctacaagtggaggatgccaagcttcatctactgactgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacatgggtaaggataaaacctttcaaatggtttagagattgttctcaggcaaaaacctgacacaaatggttaaacaggttgttaatgcttgcaagatttgccttaaaaatcatcccctcaactgaccacttctgcacccaggaacccaaaggacagcagg----ctgagggaaaactagcaaa-aaatttcacccatatgttaaaggtaaggggcatccagtatcttctagaatgaacagataccttcactaactgggtagagccatttccatgtgggacaaagaaagcctctgagttgataaaagtactgattaatgagagaattccttgctttggcctccctaagtaccttcagagagataatggcccctcattcaaggcagctgtgaccca-g----gaggtcacaaagacactaggaatacactaccatcttcattgtgcttggagaccacaatgctcaggaaagatagaaaagacaaatgatattattaaaaaggcacctcagaaaactatctccctcagactaatcttccctagactacccttctcaccatagctctactacatatttaaaacagccctttaaagctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgctagacaaataaatctctgatttgct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155364252 1360 - 185818997 agtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttctgtaaaacaagagatccataaagctgggtgcactacagttactctgaatgacatttttgagagcacgtttctctcctagggcacaagagctcaactaactgagctcattgccctcaggagggcactcaaattaagcaaagggaaagcagttaacatttacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaggacaggacctttcccacagctaatggatctcccattaaataccatcaggaaattaattgactatcatccttggtttttatcccatgggaagtggcagtaacacaatgtaaaggcccccaaaagggatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcaggtttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcaatattcccctgcggaaatagaatggggcacttcttggggatacatctttcggtcctcaggatggctacaattggaggatgccaagctttacctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaggataaaacctttcaaatggctcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgttaatgctttcaagacttgccttaaaaatcatctcctcaactgactgctcctgcacccaggaacccaaaggacagcagactacctgagggaaaactgacaagtagatttcacccatatgtcaaaggtaagggacatccagtaccttctagaatgaatagataccttcactaactgagtagagcca-ttccatgtgggacaaagaaagcctctgaggtgataaaagtactaattaacgagataattccttgccttggcctgcctaagtaccttcagagagataatcacccctcattgaaggcagctgtcaccca-g----ggggtcacaaaggcactaggaatacactaccatcttcattgtgcttggagaccgcaatgctcaggaaagacagaaaagacaaatgatattataaaaag-gcacatcaggaaactatctccctcagactcaccttccctagactacccttctcaccatagccttactacatgtttaaaacacccctttagcgataggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagacaaataaatctctgatttgat i rheMac8.chr3 C 0 I 13 s macFas5.chr3 162186950 1360 - 192294377 agtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttctgtaaaacaagagatccataaagctgggtgcactacagttactctgaatgacatttttgagagcacgtttctctcctagggcacaagagctcaactaactgagctcattgccctcaggagggcactcaaattaagcaaagggaaagcagttaacatttacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagacaggacctttcccacagctaatggatctcccattaaataccatcaggaaattaattgactatcatccttggtttttatcccatgggaagtggcagtaacacaatgtaaaggcccccaaaagggatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcaggtttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcaatattcccctacggaaatagaatggggcacttcttggggatacatctttcggtcctcaggatggctacaattggaggatgccaagctttacctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaggataaaacctttcaaatggctcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgttaatgctttcaagacttgccttaaaaatcatcccctcaactgaccgctcctgcacccaggaacccaaaggacagcagactacctgagggaaaactgacaaatagatttcacccatatgtcaaaggtaagggacatccagtaccttctagaatgaatagataccttcactaactgagtagagcca-ttccatgtgggacaaagaaagcctctgaggtgataaaagtactaattaacgagataattccttgccttggcctgcctaagtaccttcagagagataatcacccctcattgaaggcagctgtcaccca-g----ggggtcacaaaggcactaggaatacactaccatcttcattgtgcttggagaccgcaatgctcaggaaagacagaaaagacaaatgatattataaaaag-gcacatcaggaaactatctccctcagactcaccttccctagactacccttctcaccatagccttactacatgtttaaaacacccctttagcgataggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagacaaataaatctctgatttgat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8664958 1360 + 9440265 agtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttctgtaaaacaagagatccataaagctgggtacactacagttactctgaatgacatttttgagagcacgtttctctcctagggcacaagagctcaactaactgagctcattgccctcaggagggcactcaaattaagcaaagggaaagcagttaacatttacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagacaggacctttcccacagctaatggatctcccattaaataccatcaggaaattaattgactatcatccttggtttttatcccatgggaagtggcagtaacacaatgtaaaggcccccaaaagggatgaataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcaggtttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcaatattcccctacggaaatagaatggggcacttcttggggatacatctttcggtcctcaggatggctacaattggaggatgccaagctttacctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcacctgggtaaggataaaacctttcaaatggctcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgttaatgctttcaagacttgccttaaaaatcatcccctcaactgaccgctcctgcacccaggaacccaaaggacagcagactacctgagggaaaactgacaaatagatttcacccatatgtcaaaggtaagggacatccagtaccttctagaatgaatagataccttcactaactgagtagagcca-ttccatgtgggacaaagaaagcctctgaggtgataaaagtactaattaatgagataattccttgccttggcctgcctaagtaccttcagagagataatcacccctcattgaaggcagctgtcaccca-g----ggggtcacaaaggcactaggaatacactaccatcttcattgtgcttggagaccgcaatgctcaggaaagacagaaaagacaaatgatattataaaaag-gcacatcaggaaactatctccctcagactcaccttccctagactacccttctcaccatagccttactacatgtttaaaacacccctttagcgataggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagacaaataaatctctgatttgat i macNem1.NW_012019910v1 C 0 I 13 s cerAty1.NW_012002954v1 8395989 1360 + 21915920 agtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttctgtaaaacaagggatccataaagctgggtacactacagttactctgaatgatatttttgagagcacgtttctctcctagggcacaagagctcaactaactgagctcattgccctcacgagggcactcaaattaagcaaagggaaagcagttaacatttacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagacaggacctttcctacagctaatggatctcccattaaatactatcaggaaattaattgactatcatccttggtttttatcccatgggaagtggcagtaacacaatgtaaaggtccccaaaagggatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcaggtttctgatccacttgaagcctcactgatctgggagggcctcataggagaaataaaacttcaatattcccctacagaaatagaatggggcacttcttggggatacatctttcagtcctcaggatggctacaattggaggatgccaagctttacctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcgcctgggtaaggataaaacctttcaaatggctcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgctaatgcttgcaagacttgccttaaaaatcatcccctcaactgaccgctcctgcacccaggaacccaaaggacagcagactacctgagggaaaactggcaaatagatttcacccatatgtcaaaggtaagggacatccagtaccttctagaatgaatagataccttcactaactgagtagagcca-ttccatgtgggacaaagaaagcctctgaggtgataaaagtactaattaaggagataattccttgccttggcctccctaagtaccttcagagagataatcacccctcattcaaggcagctgtcaccca-g----ggggtcacaaaggcactaggaatacactaccatcttcattgtgcttggagaccacaatgctcaggaaagacagaaaagacaaatgatattataaaaag-gcacgtcaggaaactatctccctcggactcaccttccctagactacccttctcaccatagccttactacatgtttaaaacacccctttagcgataggtttgagttcttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagacaaataaatctctgatttgat i cerAty1.NW_012002954v1 C 0 I 13 s chlSab2.chr2 14972424 1361 - 90373283 agtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttcggtaaaacaagggatccataaagctgggtacactacagttactctgaatgctatttctgagagcacgtttctctcctagggcacaagagctcaactaactgagctcattgccctcacgagggcactcaaattaagcaaagggaaagcagttaacatttacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagacaggacctttcccacagctaatggatctcccattaaataccatcaggaaattaattgactatcatccttggttttcatcccatgagaagtggcagtaacacaatataaaggcccccaaaagggatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcaggtttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcaatattcccctatggaaatagaatggggcacttcttggggatacatctttcagtcctcaggatggctacaagtggaggatgccaagctttacctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcgcctgggtaaggataaaacctttcaaatggctcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgctaatacttgcaagacttgccttaaaaatcatcccctcaactgaccgctcctgcacccaggaacccaaaggacagcagactacctgagggaaaactggcaaatagatttcacccatatgtcaaaggtaagggacatccagtaccttctagaatgaatagataccttcactaactgagtagagcca-ttccatgtgggacaaagaaagcctctgaggggataaaagtactaattaacgagataattccttgccttggcctctctaagtaccttcagagagataatcacccctcattcaaggcagctgtcacccagg----ggggtcacaaaggcactaggaatacactaccatctccattgtgcttggagaccgcaatgctcaggaaagacagaaaagacaaatgatattataaaaag-gcacgtcaggaaactatctccctcggactcaccttccctagactacccttctcaccatagccttactacatgtttaaaacacccctttagcgataggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagataaataaatctctgatttgat i chlSab2.chr2 C 0 I 13 s manLeu1.NW_012102865v1 2140056 1360 + 4234846 agtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttctgtaaaacaagggatccataaagctgggtacactacagttactctgaatgatatttttgagaccacgtttctctcctagggcacaagagctcaactaactgagctcattgccctcacgagggcactcaaattaagcaaagggaaagcagttaacattaacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagacaggacctttcccacagctaatggatctcccattaaatactatcaggaaattaattgactatcatccttggtttttatcccatgggaagtggcagtaacacaatgtaaaggcccccaaaagggatggataaagtaactgagggaaataggttggaagactaagcagctaagtcagcagagagagggcctcaggtttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcaatattcccctacggaaatagaatggggcacttcttggggatacatctttcagtcctcagaatggctacaattggaggatgccaagctttacctactggctgccaaacaatggaaagttcttaaaagccttcaccaggcctttcgcctgggtaaggataaaacgtttcaaatggctcagagattgttctcaggtaaaaacctgacacaaatggttaaacaggttgctaatgcttgcaagacttgccttaaaaatcatcccctcaactgaccgctcctgcacccaggaacccaaaggacagcagactacctgagggaaaactggcaaatagatttcacccatatgtcaaaggtaagggacatccagtaccttctagaatgaatagataccttcactaactgagtagagcca-ttccatgtgggacaaagaaagcctctgaggcgataaaagtactaattaacgagataattccttgccttggcctccctaagtaccttcagagagataatcacccctcattcaaggcagttgtcaccca-g----ggggtcacaaaggcactaggaatacactaccatcttcattgtgcttggagaccacaatgctcaggaaagacagaaaagacaaatgatattataaaaag-gcacctcaggaaactatctccctcggactcatcttccctagactacccttctcaccatagccttactacatgtttaaaacacccctttagcgataggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagacaaataaatctctgatttgat i manLeu1.NW_012102865v1 C 0 I 13 s colAng1.NW_012120598v1 146727 1360 - 13750039 agtatccagccagagagggc--ctaggaaacccccttagagaaccaagacaaaattctctttacagatggaaattcttctgtaaaacaagggatccataaagctgggtacactacagctactctgaatgatatttttgagagcacgtctctctcctagggcacaagagctcaactaactgagctcattgccctcatgagggcactcaaattaagcaaagggaaagcagttaacatttacactgattctaagtatccttccctagacctccatgcccatgctgctatctggaaagacaggaactttcccacagctaatggatttcccattaaataccatcaggaaattaattgactatcatccttggttttcagcccatgggaagtggcagtaacacaatgtaaaggcccccaaaagggatggataaagtgacggagggtaataggttggaagactaagcagctaagtcagcagagagagggcctcagatttctgatccacttgaagccccactgatctgggagggcctcataggagaaataaaacttcaatatttccctatggaaatagaatggggcacttcttggggatacatctttcagtcctcaggatggctacaattggaggatgccaagcttcacctactggttgccaaacaatggaaagttcttaaaagccttcaccaggccttttgcccgggtaaggataaaacctttcaaatggctcagagatttttctcaggtaaaaacctgacacaaatggttaaacaggttgctaatgcctgcaagacttgccttaaaaatcatcccctcaactgaccgcttctgcacccaggaacccaaaggacagcagactacctgagggaaaactggcaaatagatttcacccatgtgtcaaaggtaaggagcatccagtaccttctaaaatgaatagacaccttcactaactgggtagagcca-ttccatgtgggacaaagaaagcctctgaggtgataaaagtactaattaatgagataattccttgccttggcctccctaagtaccttcagagagataatgacccctcattcaaggcagctgtcaccca-g----gtggtcccaaaggcactaggaatacactaccatcttcattgtgctcggagaccacaatgctcaggaaagacagaaaagacaaatgatattataaaaag-gcacctcaggaaactatctccctcagactcatcttccctagactacccttctcaccatagccctactacatatttaaaacacccctttagtgctaggtttgagtccttttgaaatgatgtatggacagccttttctcaccaatgatttcttgcaagacaaataaatctctgatttgat i colAng1.NW_012120598v1 I 16261 I 16 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=15045.000000 s hg38.chr21_KI270874v1_alt 38226 18 + 166743 agacaaataaatctctga s panTro5.chr21 3662733 18 + 33445071 agacaaataaatctctga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17289652 18 + 46275980 agacaaataaatctctga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3228709 18 - 13858734 agacaaataaatctctga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4410931 18 + 32716333 agacaaataaatcaccga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162188310 13 - 192294377 ---taaatgtatatct-- i macFas5.chr3 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 148087 16 - 13750039 I e cerAty1.NW_012002954v1 8397349 13 + 21915920 I e macNem1.NW_012019910v1 8666318 13 + 9440265 I e manLeu1.NW_012102865v1 2141416 13 + 4234846 I e chlSab2.chr2 14973785 13 - 90373283 I e rheMac8.chr3 155365612 13 - 185818997 I a score=15510.000000 s hg38.chr21_KI270874v1_alt 38244 3 + 166743 tct s panTro5.chr21 3662751 3 + 33445071 tct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17289670 3 + 46275980 tct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3228727 3 - 13858734 tct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4410949 3 + 32716333 tct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155365625 3 - 185818997 tct i rheMac8.chr3 I 13 C 0 s macFas5.chr3 162188323 3 - 192294377 tct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8666331 3 + 9440265 tct i macNem1.NW_012019910v1 I 13 C 0 s cerAty1.NW_012002954v1 8397362 3 + 21915920 tct i cerAty1.NW_012002954v1 I 13 C 0 s chlSab2.chr2 14973798 3 - 90373283 tct i chlSab2.chr2 I 13 C 0 s manLeu1.NW_012102865v1 2141429 3 + 4234846 tct i manLeu1.NW_012102865v1 I 13 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e colAng1.NW_012120598v1 148087 16 - 13750039 I a score=3820122.000000 s hg38.chr21_KI270874v1_alt 38247 678 + 166743 ttggcccatttccaacaggaactggagcaactgtcagaggcccaatcccatgaatttgggccacttctattcaacccaggggacctagtactgatgaaggtacttccttcccttcctccctctataaacccagattggaagggactttacgctgtacttgtttccactcctacagcactgaaagtcactgga-------atat-------gttcttggatttattatacccaagtaaaggcctggaaagctcacagagttacctccatcaacccagaagaccaccgaaagtaacaatgtgaagagatcagagatctcaagttaataattttttaaa-aagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcgttctattgtataccacaggTTAAAAATGGtgatttcagaatgattagtatatttcacttatttctgtaatctttggcacaaaattctttccttttaactcctctttgtgtaatacacatatttgatccacacatacttaactttgtaaaacttgttttttcttgcctagaggccatcaaactccaagctatcaaacaaccggagcctcagacaatggttcccttttgctggggacctctgggaggaatctgactgctgttctgcctaaaa-caaCaccccctgtca s panTro5.chr21 3662754 679 + 33445071 ttggcccatttccaacaggaactggagcaactgtcagaggcccaatcccatgaatttgggccacttctattcaacccaggggacctagtactgatgaaggtacttccttcccttcctccctctataaacccagattggaagggactttacgctgtacttgtttccactcctacagcactgaaagtcactgga-------ctat-------gttcttggatttattatacccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccaccgaaagtaccaatgtgaagagatcagagatctcaagttaacaattttttaaa-aagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcgttctattgtataccacaggttacaaatggtgatttcagaatgattagtatatttcacttatttctgtaatctttggcacaaaattctttccttttaactcctctttgtataatacacatatctgatccacacatacttaactttgtaaaacttgttttttcttgcctagaggccatcaaactccaagctatcaaacaaccggagccgcagacaatggttcccttttgctggggacctctgggaggaatctgactgctgttctgcctaaaaACAACaccccctgtca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17289673 678 + 46275980 ttggcccatttccaacaggaactggagcaactgtcagaggcccaatcccatgaatttgggccacttctattcaacccaggggacctagtactgatgaaggtacttccttcccttcctccctctataaacccagattggaagggactttacgctgtacttgtttccactcctacagcactgaaagtcactgga-------atat-------gttcttggatttattatacccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccaccgaaagtaccaatgtgaagagatcagagatctcaagttaataattttttaaa-aagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcgttctattgtataccacaggttacaaatggtgatttcagaatgattagtatatttcacttatttctgtaatctttggcacaaaattctttccttttaactcctctttgcataatacacatatctgatccacacatacttaactttgtaaaacttgttttttcttgcctagaggccatcaaactccaagctatcaaacaaccggagcctcagacaatggttcccttttgctggggacctctgggaggaatctgactgctgttctgcctaaaa-caaCaccccctgtca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3228730 677 - 13858734 ttggcccattaccaacaggaactggagcaactgtcagaggcccaatcccatgaatttgggccacttctattcaacccaggggacctagtactgatgaaggtacttccttcccttcctccctctataaacccagattggaagggactttatgctgtacttgtttccactcctacagcactgaaagtcactgga-------atat-------gttcttggatttattatacccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccaccgaaagtaccaatgtgaagagatcagagatctcaagctaataattttaaaac-aagtgttaataattagcttttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcgttctattgtataccacaggTTACAAATGGtgctttcagaatgattagtatatttcacttatttctgtaatctttggcacaagattctttccttttaactcctctttgtataacacacatatttgatccacacatacttaactttgtaaaacttgttttttcttgcctagaggccatcaaactccaagctatcaaacaaccggagcctcagacaatggttcccttttgctggggacctctgggaggaatccgactgctgttctgcctaaaa-caacaccccc-gtca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4410952 671 + 32716333 ttggcccatttccaacaggaactggagcaatggtcagaggcccaatcccatgaatttgggccacttctattcaacccaaa-----tagtactgatgaaggtacttgcttcccttcctccctctataaacccagattggaagggattttatgctgtacttgtttctactcctacagcactgaaggtcactgga-------atat-------gttcttggatttattatacccaagtaaaggcctggaaagctgacagagttacctccgtcaacccagaagaccacccaaagtaccaatgtgaagagaacagagatctcaagctaaaaa-ttaaaaaa-aagtgttaataattagcctttcagctatattctctttatagtcttgcctatgcttgctgttgttaccttcgttGTACTGTATACGACAGGTTACAAATGGtgctttcagaatgattagtatatttcacttatttctgcaatctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaacttggtaaaacttgtttcttcttgcctagaggccatcaaactccaagctgtcaaacaaccagagcctcagccaatggttcccttttgctggggacctctgggaggaatctgactgctgctctgcctaaaa-caacaccccc-gtca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155365628 693 - 185818997 ttggcccacttccaacaggaactggagcaactgtcggaggcctaatcccattcacttgggccacttctattcaacccaggggacctagtactgatgaaggttcttcctttccttcctccctctataaacccagataggaagggactttatgctgtacttatttctactcctacagcactgaaggtcactggatttggttatataaatctagctcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccacccaaagtaccaacgtgaagagatcagagatctcaagctaaaaattttaaaactaagtgttaataattagcctttcaggtatattctctttagagtcttgcctatgcttgctgttgttaccttcattctattgtataccacagggTACAaatgttgctttcagaatgattagtatatttcacttatttctgcattctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagttgtcaaacaaccagagcctcagacaatggtttccttttgctggggacctctgggaggaatctgactgctgttctccctaaaa-caacatcccctgtca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162188326 692 - 192294377 ttggcccacttccaacaggaactggagcaactgtcggaggcctaatcccattcacttgggccacttctattcaacccaggggacctagtactgatgaaggttcttcctttccttcctccctctataaacccagataggaagggactttatgctgtacttatttctactcctacagccctgaaggtcactggatttggttatataaatctagctcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccacccaaagtaccaacgtgaagagatcagagatctcaagctaaaaattttaaaactaagtgttaataattagcctttcaggtatattctctttggagtcttgcctatgcttgctgttgttaccttcattctattgtataccacagggTA-Aaatgttgctttcagaatgattagtatatttcacttatttctgcattctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagttgtcaaacaaccggagcctcagacaatggtttccttttgctggggacctctgggaggaatctgactgctgttctccctaaaa-caacatcccctgtca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8666334 693 + 9440265 ttggcccacttccaacaggaactggagcaactgtcggaggcctaatcccattcacttgggccacttctattcaacccagaggacctagtactgatgaaggttcttcctttcctttctccctctataaacccagataggaagggactttatgctgtacttatttctactcctacagcactgaaggtcactggatttggttatataaatctagctcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccacccaaagtaccaacgtgaagagatcagagatctcaagctaaaaattttaaaactaagtgttaataattagcctttcaggtatattctctttagagtcttgcctatgcttgctgttgttaccttcattctattGTATGCCACAGGGTACAaatgttgctttcagaatgattagtatatttcacttatttctgtattctttggcacaagattctttccttttaactcctctttttataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagttgtcaaacaaccggagcctcagacaatggtttccttttgctggggacctctgggaggaatctgactgctgttctccctaaaa-caacatcccctgtca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8397365 684 + 21915920 ttggcccacttccaacaggaactggagcaactgtcggaggcctcatcccattaacttgggccacttctattcaacccaggggacctagtactgatgaaggttcttcctttccttcctctctctataaaccc--ataggaagggactttatgctgtacttatttctactcctacagcactgaaggtcactggatttggttatataaatctagctcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccacctaaagtaccaacatgaagagatcagagatctcaagctaaaaattttaaaactaagtgttaataattagcctttcaggtatattctctttagagtcttgcctatgtttgctgttgttaccttcattctattgtataccacagggTACAaatgttgctttcagaatgattagtatatttcacttatttctgtattctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagttgtcaaacaactggagcctca-------gtttccttttgctggggacctctgggaggaatctgactgctgttctccctaaaa-caacatcccctgtca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14973801 692 - 90373283 ttggcccacttccaacaggaactggagcaactgttggaggcctaatcccattaacttgggccacttctattcaactcagggga-ctagtactgatgaaggttcttcctttccttcctctctctataaacccagataggaagggagtttatgctgtacttatttctacttctacagcactgaaggtcactggatttgtttatataaatccagctcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccacccaaagtactaacgtgaagagatcagagatctcaagctaaaaatttaaaaactaagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcattctattgtataccacagggTACAaatgttgctttcagaatgattagtatatttcacttatttctgtattctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagttgtcaaacaaccggagcctcagacaatggttcccttttgctggggacctctgggaggaatctgactgctgttctccctaaaa-caacatcccttgtca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2141432 693 + 4234846 ttggcccacttccaacaggaactggagcaactgtcggaggcctaatcccattaacttgggccacttctattcaacccaggggacctagtactgatgaaggttcttcctttccttcctccctctataaacccagataggaagggactttatgctgtacttatttctactcctacagcactgaaggtcactggatttggttatataaatctagctcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaacccagaagaccacccaaagtaccaacgtgaagagatcagagatctcaagctaaaaattttaaaactaagtgttaataattagcctttcaggtatattctctttggagtcttgcctatgcttgctgttgttaccttcattctattgtagaccacagggTACAaatgttgctttcagaatgattagtatatttcacttatttctgtattctttggcacaagattctttccttttaactcctctttgtataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagttgtcaaacaaccggagcctcagacaatggtttccttttgctggggacctctgggaggaatctgactgctgttctccctaaaa-caacatcccctgtca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 148103 679 - 13750039 ttggcccacttccaacaggaactggagcaactgtcggaggcctaatcccattaacttgggccacttctattcaacccaggggacctagtactgatgaagatacttcctttccttcctccctctataaacccagataggaagggactttatgctgtacttatttctactcctacagcactgaaggtcactgga-------atat-------gttcttggatttattatatccaagtaaaggcctggaaagctgacagagttacctccatcaatccagaaaaccacccaaagtaccaatgtgaagagatcagagatctcgagctaaaaatttaaaaaataagtgttaataattagcctttcaggtatattctctttatagtcttgcctatgcttgctgttgttaccttcattctattgtataccacagggTACAaatgttgctttcagaatgattagtatatttcacttatttctgtaatctttggcatgagattctttccttttaacttctctttgtataatacacatatttgatccacacatacttaactttgtaaaagttgtttcttcttgcctagaggtcatcaaactccaagctgtcaaaccactggagcctcagacaatggttcccttttgctggggacctctgggaggaatctgactgctgttctccctaaag-caacaccccctgtca i colAng1.NW_012120598v1 I 16 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8700692 22431 + 9889416 I e cebCap1.NW_016107322v1 9577359 9436 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e calJac3.chr21 21891903 10705 + 50472720 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=14306067.000000 s hg38.chr21_KI270874v1_alt 38925 1710 + 166743 ccaaaaagcctgacaccatgacccaaagtgagaacttatatcattgttttcctgctctaatgttgccttttccaaaaccactcatgttctgtcccacccccatcctgtacagataaaaatcccaggctcagccaacaaaagaggagaagcagctggacgtcagagactatggttgcatgtcggagagaagcagcttaactttaaagagagagcttgatggtgtcacttcagagaggagtctggccagggatggtcagacttcaagggaggattgcctccccaccctgtccccttttcaact-cccatcccactaagagtgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggatgccagaaaagagctcagagccacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctgttaacactaaagccatccacagatggcaaagctaaaagtccactgtaacagtcattctggggcttcaggggttgtgagcacccttcaagatggtgccatg------------agtttttctcctattggtgcccaaaagcactcaccctggtttctgcacccactcacctgcatactccctcttgtgaggggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacagtagttgcaaaaaaaaaa---gaaaaaagaaaaaaaaa--cttaagaatacatctaaccaaagaggtgaaagaccactacaaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatattgtgaaaatgatcatactgtcaaaagcaatctagaaattcaatgcaattctcataaaaataccatcatcattcttcacacaactagaaaaagcaatcctaaaattcacatggaaccaaaaaagagttcacatactcaaag----agtaagcaaaaagaacaagtccggaggcatcacattacatgacttcaaactataatgtaatgccatagtcaccaaaacagcaaggtactggtataaaagtaggcacaaagaccaatggaacaggatagagaggacagaaataaagcaaaatacatatagccaaccaatctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattggcaagccacatgtag-agaatgaaactggatcctcatctctcaccttatgcaaaatcaactcaagatggatcaaacacttaaatctaagacctcaaaccataaagattctagaagataacattggaagaacccttctatacattggcttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaagataaatagaaggagc----ttaaactaaaaatcttcttcacagcaaaagaaataatcctcagagtaaacagacaacccacagagtggg-aaaaattctttgcaaactgtgcatctgacaaagaactaat-tccagaatctacaaagaactcaaacgaatcagaaag---aaaaaaaa-caaacaatcccatcaaaaagtgggcaattgacatgaatagataattctcaattt s panTro5.chr21 3663433 1717 + 33445071 ccaaaaagcctgacaccatggcccaaagtgagaacttatatcattgttttcctgctctaatgttgccttttccaaaaccactcatgttctgtcccacccccatcctgtacagataaaaatcccaggctcagccaacaaaagaggagaagcagctggacgtcagagactatggttgcatgtcggagagaagcagcttaactttaaagagagagcttgatggtgtcacttcagagaggagtctggccagggatggtcagacttcaagggaggattgccttcccaccctgtccccttttcaact-cccatcccactaagagtgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggatgccagaaaagagctcagagccacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctgttaacacttaagccatccacagatggcaaagctaaaagtccactgtaacagtcattctggggcttcaggggttgtgagcacccttcaagatggtgccatg------------agttttgctcctattggtgcccaaaagcactcaccctggtttctgcacccactcacctgcatactccctcttgtgaggggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacagtagttgcaaaaaaaaaa--agaaaaaagaaaaaaaaaa-cttaagaatacatctaaccaaagaggtgaaagaccactacaaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatattgtgcaaatgatcatactgtcaaaagcaatctagaaattcaatgcaattctcataaaaataccatcatcgttcttcacacaactagaaaaagcaatcctaaaattcacatggaaccaaaaaagagctcacatactcaaagtaagagtaagcaaaaagaacaagtccggaggcatcacattacatgacttcaaactataatataatgccatagtcaccaaaacagcaaggtactggtataaaagtaggcacaaagaccaatggaacaggatagagaagacagaaataaagcaaaatacatatagccaaccaatctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattggcaagccacatgtag-agaatgaaactggatcctcatctctcaccttatgcaaaatcaactcaagatggatcaaacacttaaatctaagacctcaaaccataaagattctagaagataacattggaagaacccttctatacattggcttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaagataaatagaaggagc----ttaaactaaaaatcttcttcacagcaaaagaaataatcctcagagtaaacagacaacccacagagtggg-aaaaattctttgcaaactgtgcatctgacaaagaactaat-tccagaatctacaaagaactcaaacgaatcagaaag---aaaaaaaaacaaacaatcccatcaaaaagtgggcaattgacatgaatagataattctcaattt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17290351 1714 + 46275980 ccaaaaagcctgacaccatggcccaaagtgagaatttatatcattgttttcctgctctaatgttgccttttccaaaaccactcatgttctgtcccacccccatcctgtacagataaaaatcccaggctcagccaacaaaagaggagaagcagctggacgtcagagactatggttgcatgtcggagagaagcagcttaactttaaagagagagcttgatggtgtcacttcagagaggagtctggccagggatggtcagacttcaagggaggattgccttcccaccctgtccccttttcaatt-cccatcccactaagagtgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggatgccagaaaagagctcagagccacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctgttaacacttaagccatccacagatggcaaagctaaaagtccactgtaacagtcattctggggcttcaggggttgtgagcacccttcaagatggtgccatg------------agttttgctcctattggtgcccaaaagcactcaccctggtttctgcacccactcacctgcatactccctcttgtgaggggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaagcccatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacagtagttgcaaaaaaaaaa---agaaaaagaaaaaaaaa--cttaagaatacatctaaccaaagaggtgaaagaccactacaaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatattgtgcaaatgatcatactgtcaaaagcaatctagaaattcaatgcaattctcataaaaataccatcatcattctacacacaactagaaaaagcaatcctaaaattcacatggaaccaaaaaagagctcacatactcaaagtaagagtaagcaaaaagaacaagtccggaggcatcacattacatgacttcaaactataatataatgccatagtcaccaaaacagcaaggtactggtataaaagtaggcacaaagaccaatggaacaggatagagaagacagaaataaagcaaaatacatatagccaaccaatctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattggcaagccacatgtag-agaatgaaactggatcctcatctctcaccttatgcaaaatcaactcaagatggatcaaacacttaaatctaagacctcaaaccataaagattctagaagataacattggaagaacccttctatacattggcttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaagataaatagaaggagc----ttaaactaaaagtcttcttcacagcaaaagaaataatcctcagagtaaacagacaacccacagagtggg-aaaaattctttgcaaactgtgcatctgacaaagaactaat-tccagaatctacaaagaactcaaacgaatcagaaag---aaaaaaaa-caaacaatcccatcaaaaagtgggcaattgacatgaatagataattctcaattt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3229407 1714 - 13858734 ccaaaaagcctgacaccatggcccaaagtgagaacttatatcattgttttcctgctttaatgttgccttttccaaaaccactcatgttctgtcccacccccatcctgtacagataaaaatcccaggctcagccaacaaaagaggagaagcagctggacgtcagagactatggttgcatgtcggagagaagcagcttaactttaaagagagagcttgatggtgtcacttcagagaggagtctggccagggatggtcagacttcaagggaggattgccttcccaccctgtccccttttcaact-cccatcccactaagagtgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggatgccagaaaagagctcagagccacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctgttaacacttaagccatccacagatggcaaagctaaaagtccactgtaacagtcattctggggcttcaggggttgtgagcacccttc-agatggtgccatg------------agttttgctcctattggtgcccaaaagcactcaccctggtttctgcacccactcacctgcatactccctcttgtgaggggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacagtagttgcaaaaaaaaaaaaaaaaaaaagaaaaaaaaaa-cttaggaatacatctaaccatagaggtgaaagaccactacaaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatattgtgaaaatgatcatactgtcaaaagcaatctagaaattcaaggcaattctcataaaaataccatcatcattcttcacacaactagaaaaagcaatcctaaaattcacatggaaccaaaaaagagctcacatactcaaagtaagactaagcaaaaagaacaaat-cgggggcatcacattacatgacttcaaactataatataatgccatagtcaccaaaacagcaaggtactggtataaaaataggcacaaagaccaatggaacaggatagagaagacagaaataaagcaaaatacatatagccaaccaatctttgacaaaccaaacaaaaacataaagtggggaaaggacaccctattcaa-aaatcgtgctgggataattggcaagccacatgtag-agaatgaaactggatcctcatctctcaccttacacaaaatcaactcaatatggatcaaacacttaaatctaagacctcaaaccataaagattctagaagataacattggaagaacccttctatacattggcttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaagataaatagaaggagc----ttaaactaaaaatcttcttcacagcaaaagaaataatcctcagagtaaacagacaacccacagggtggg-aaaaattctttgcaaactgtgcatctgacaaagaactaat-tccagaatctacaaagaactcaaacaaatcagaaag---aaaaaaaa--aaacaatctcatcaaaaagtgggcaattgacatgaatagataattctcaattt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4411623 1707 + 32716333 ccaaaaagcctgacaccatggcccaaagtgagaacttatatcattgttttcctgctctaatgttgccttttccaaaaccactcatgttctgtcccacccccatcctgtacagataaaaatccccggctcagccaacaaaagaggagaaacagctggacgtctgagactatggttgcatgtcagagagaagcagcttaacttcaaagacagagcttgatggtgtcacttcagagaggagtctggccagggatggtcagacttcaagggaggattgccttcccaccctgtcccctttccaactccccatctcactaagagcgactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggatgccagaaaagagctcagagacacaaatgt-ggtgcaaaaggctgtc-acactgaccctccattgagctattaacacttaagccatccacagatggcaaagctaaaagtccactgtaacagtcattctggagcttcaggggttgtgagcacccttcaagatggtgccatg------------agttttcctcctgctggtgcccaaaagcactcaccctggtttctgcacccactcacctgcatgctccctcttgtgaggggttgagaactgtgggatgagtaagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataa--caacatcttttacagtagtcgcaaaaagaaaa--------aagaaaaaaaaaa-cttaggaatacatctaaccaaagaggtgaaagaccactacaaggaaaactacaaaacactgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatattgtgaaaatgatcatactgtcaaaagcaatctagaaattcaatgcaattctcataaaaataccatcatcattcttcacacaactagaaaaagcaatcttaaaattcacatagaaccaaaaaagagctcacatactcaaagtaagactaagcaaaaagaacaaatccggaggcatcacattacatgacttcaaactatactctaatgccatagtcaccaaaacagcaaggtattggtataaaaataggcacaaagaccaatggaacaggatagagaagacagaaataaagcaaaatacataaagccaaccaatctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattggcaagccacatgtggaagaatgaaactggatcctcatctctcaccttatacaatatcaactcaagatggatcaaacacttaaatctaagacctcgaaccataaagattctagaagataacattgggag-acccttctatacattggtttaggcaaagacttcctgacttagaacacaaaagcaaatgcaacaaaaacaaaaataagtagaaggagc----ttaaactaaaaaccttctttacagcaaaagaaataatcatcagagtaaacagacaactcacagagtggg-aaaaattctttgcaaac--tgcatctgacaaagaactaatatccagaatctacaaagaactcaaacaaatcagaaag---aaaaaaac--aaacaatcccatcaaaaattgggcaatggacgtaaatagataattctcaattt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155366321 1710 - 185818997 ccaAAaaacctgataccatggccc-aagtgaggatttatatcattgtcttcctgcttaaatgttgccttttccaaaaccactcatgttctgccctgcccacatcctgtacagacaaaaatcccatgctcagccaacaaaagaggagaagcaactggacgtcagagactgtggttgcatgtggcagagaagcagcttaacttcaaagagacagcttgatgatgttgcttcagagaggagtctggctagggatggtcagacttcaagggagggtttccttcccactctatccccttttcaactccccatcccactaagagccactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacttcatgtttcctggataccagaaaagagcttagagccacaaatgt-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacactgaagccat-cacagatggcaaaggtaaaagtgcactgtaacactcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaagcactcaccctggtttctgcacctactcacctgcatgctccctcttgtgatggattgagaactgtgggattagtaagtgaggcactcctttcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacggtagctgcaaaaagaaaa--------aagaaaaaaaaaaccttaggaatacatctaaccaaggaggtgacagacccctacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagacattcaatgcaattctcataaaaatgccatcatcagtcttcacacaactagaaaacgcaatccccaaattcac--ggaacccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggaggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatacagccaaccagtctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattgaaaagccacacatagaaaaatgaaactggattctcatctctcaccttatgcaaaatctactcaagatggatcaaacacttaaatctaagacctaaaaccataacgattctagaagataacatcagaagaacccttctatacattggcataggcaaagacttcctgacttagaacagaaaagcaaatgcaacaaaaacaaagataaatagatggagt----ttaaactaaaaagcttctgcacagcaaaataaataatcatcaaaataaacagacaacccacagagtggg-aaaaattttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaag--aaaaaaaaa--aaacaatcccatcaaaaagtgggcaatggacataaatagataattttcagttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162189018 1709 - 192294377 ccaAAaaacctgataccatggccc-aagtgaggatttatatcattgtcttcctgcttaaatgttgccttttccaaaaccactcatgttctgccctgcccacatcctgtacagacaaaaatcccatgctcagccaacaaaagaggagaagcaactggacgtcagagactgtggttgcacgtggcagagaagcagcttaacttcaaagagacagcttgatgatgttgcttcagagaggagtctggctagggatggtcagacttcaagggagggtttccttcccactctatccccttttcaactccccatcccactaagagccactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacttcatgtttcctggataccagaaaagagcttagagccacaaatgt-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacactgaagccat-cacagatggcaaaggtaaaagtgcactgtaaccctcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaagcactcaccctggtttctgcacctactcacctgcatgctccctcttgtgatgggttgagaactgtgggattagtaagtgaggcactcctttcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacggtagctgcaaaaagaaaa--------aagaaaaaaaaaaccttaggaatacatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagacattcaatgcaattctcataaaaatgccatcatccgtcttcacacaactagaaaacgcaatccccaaattcac--ggaacccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggaggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatacagccaaccagtctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattgaaaagccacacatagaaaaatgaaactggattctcatctctcaccttatgcaaaatctactcaagatggatcaaacacttaaatctaagacctaaaaccataacaattctagaagataacatcagaagaacccttctatacattggcataggcaaagacttcctgacttagaacagaaaagcaaatgcaacaaaaacaaagataaatagatggagt----ttaaactaaaaagcttctgcacagcaaaataaataatcatcagaataaacagacaacccacagagtggg-aaaaattttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaag---aaaaaaaa--aaacaatcccatcaaaaagtgggcaatggacataaatagataattctcagttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8667027 1709 + 9440265 ccaAAaaacctgataccatggccc-aagtgaggatttatatcattgtcttcctgcttaaatgttgccttttccaaaaccactcatgttctgccctgcccacatcctgtacagacaaaaatcccatgctcagccaacaaaagaggagaagcaactggacgtcagagactgtggttgcatgtggcagagaagcagcttaacttcaaagagacagcttgatgatgttgcttcacagaggagtctggctagggatggtcagacttcaagggagggtttccttcccactctatccccttttcaactccccatcccactaagagccactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacttcatgtttcctggataccagaaaagagcttagagccacaaatgt-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacactgaagccat-cacagatggcaaaggtaaaagtgcactgtaacactcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaagcactcaccctggtttctgcacctactcacctgcatgctccctcttgtgatgggttgagaactgtgggattagtaagtgaggcactcctttcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacagtagctacaaaaagaaaa--------aag-aaaaaaaaaccttaggaatacatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagacattcaatgcaattctcataaaaatgccatcatcagtcttcacacaactagaaaacgcaatccccaaattcac--ggaacccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggaggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatacagccaaccagtctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattgaaaagccacacatagaaaaatgaaactggattctcatctctcaccttatgcaaaatctactcaagatggatcaaacacttaaatctaagacctaaaaccataacgattctagaagataacatcggaagaacccttctatacattggcataggcaaagacttcctgacttagaacagaaaagcaaatgcaacaaaaacaaagataaatagatggagt----ttaaactaaaaagcttctgcacagcaaaataaataatcatcagaataaacagacaacccacagagtggg-aaaaattttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaag--aaaaaaaaa--aaacaatcccatcaaaaagtgggcaatggacataaatagataattctcagttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8398049 1711 + 21915920 ccaAAaaacctgataccatggccc-aagtgaggatttatatcattgttttcctgcttaaatgttgccttttccaaaaccactcatgttctgccctgcccacatcctgtacagacaaaaatcccatgctcagccaacgaaagaggagaagcaactggacgtcagagactgtggttgcatgtggcagagaagcagcttaacttcaaagagacagcttgatgatgttgcttcagagaggagtctggctagggatggtcagacttcaagggagggtttccttcccactctatccccttttcaactccccatcccactaagagccactttcatcagcaataaaatcc---cctgcatttaccatcttcaattcattcatgcaacttcatgtttcctggataccagaaaagagcttagagccacaaatgt-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacactgaagccat-cacagatggcaaaggtaaaagtgcactgtaacactcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaagcactcaccctggtttctgcacctactcacctgcatgctccctcttgtgatgggttgagaactgtgggattagtaagtgaggcactcctttcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcgacatcttttatggtagctgcaaaaagaaaa--------aagaaaaaaaaaaccttaggaatgcatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagacattcaatgcaattctcataaaaatgccatcatcagtcttcacacaactagaaaacgcaatccccaaattcacatggaacccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggcggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaagatactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatacagccaaccagtctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctgggataattgaaaagccacacatagaaaaatgaaactggattctcatctctcaccttatgcaaaatctattcaagatggatcaaacacttaaatctaagacctaaaaccataacgattctagaagataacatcggaagaacccttctatacattggcataggcaaagacttcctgacttagaacagaaaagcaaacgcaacaaaaacaaagataaatagatggagt----ttaaactaaaaagcttctgcacagcaaaataaataatcatcagagtaaacagacaacccacagagtggg-acaaattttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaag---aaaaaaaa--aaacaatcccatcaaaaagtgggcaatggacataaatagataattctcagttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14974493 1714 - 90373283 ccaAAaaccctgataccatggccc-aagtgaggatttatatcattgttttcctgcttaaatgttgccttttccaaaactactcatgttctgccctgcccgcatcctgtacagacaaaaatcccatgctcagccaacaaaagaggagaagcaactggacgtcagagactgtggttgcatgtggcagagaagcagcttaacttcaaagagacagcttgatgatgttgcttcagagaggagtctggctagggatggtcagacttcaagggagggtttccttcccactctatccccttttcaactccccatcccactaagagccactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacttcatgtttcctggataccagaaaagagcttagagccacaaatgt-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacactgaagccat-cacagatggcaaaggtaaaagtgcactgtaacactcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaagcactcaccctggtttctgcacctactcacctgcatgctccctcttgtgatgggttgagaactgtgggaatagtaagtgaggcactcctttcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacggtagctgcaaaaagaaaa--------aagaaaaaaaaaaccttaggaatacatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatcttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagacattcaatgcaattctcataaaaatgccatcatcagtcttcacacaactagaaaatacaatcccaaaattcacatggaacccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggaggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatacagccaaccagtctttgacaaagcaaacaaaaacataaagtgaggaaaggacaccctattcaacaaatggtgctgggataattgacaagccacacatagaaaaatgaaactggattctcatctctcaccttatgcaaaatctactcaagatggatcaaacacttaaatctaagacctaaaaccataacgattctagaagataacatcggaagaacccttctatacattggcataggcaaagacttcctgacttagaacagaaaagcaaatgcaacgaaaacaaagataaatggatggagt----ttaaactaaaaagcttctgcacagcaaaataaataatcatcagagtaaacagacaacccacagagtggg-aaaaattttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaagaaaaaaaaaaa--aaacaatcccatcaaaaagtgggcaatggacataaatagataattctcagttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2142125 1709 + 4234846 ccaAAaaacctgataccatggccc-aagtgaggatttatatcattgttttcctgcttaaatgttgccttttccaaaaccactcatgttctgccctgccgacatcctgtacagacaaaaatcccatgctcagccaacaaaagaggagaagcaactggacgtcagagactgtggttgcatgtggcagagaagcagcttaacttcaaagagacagcttgatgatgttgcttcagagaggagtctggctagggatggtcagacttcaagggagggtttccttcccactctatccccttttcaactctccatcccactaagagccactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacttcatgtttcctggataccagaaaagagcttagagccacaaatgt-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacactgaagccat-cacagatggcaaaggtaaaagtgcactgtaacactcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaagcactcaccctggtttctgcacctactcacctgcatgctccctcttgtgatgggttgagaactgtgggattagtaagtgaggcactcctttcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttatggtagctgcaaaaagaaaa--------aag-aaaaaaaaaccttaggaatacatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacatttctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatgtagacattcaatgcaattctcataaaaatgccatcatcagtcttcacacaactagaaaaagcaatccccaaattcacgtggaacccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggcggcatcacattacatgacttcaaactatactataacgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaagcaaaatacatacagccaaccagtctttgacaaagcaaacaaaaacataaagtggggaaaggacaccctattcaacaaatggtgctggaataattgaaaagccacacatagaaaaatgaaactggattctcatctctcacattatgcaaaatctattcaagatggatcaaacacttaaatctaagacctaaaaccataacgattctagaagataacatcggaagaacccttctatacattggcataggcaaagacttcctgacttagaacagaaaagcaaacgcaacaaaaacaaagataaatagatggagt----ttaaactaaaaagcttctgcacagcaaaataagtaatcatcagagtaaacagacaacccacagagtggg-aaaaa-tttttgcaaactatgcatctgacaaagaactaatatccagactctacaaagaactcaaacaaatcagaaag---aaaaaaaa--aaacaatcccatcaaaaagtgggcaatggacataaatagataattctcagttt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 148782 1715 - 13750039 ccaaaacacctgataccatggcccaaagtgaggatttatatcattgctttcctgctcgaatgttgccttttccaaaaccactcatgttctgccctgcccgcatcctgtacagacaaaaatcccaggtccggccaacaaaagaggagaagcagctggacgtcagagactgtggttgcacatggcagagaagcagcttaacttcaaagagacagcttcatggtatcgcttcagagaggagtctggctagggatagtcagacttcaagggagggttgccttcccactctatccccttttcaactccccatcccactaagagccactttcatcagcaatataatcc---cctgcatttaccatcttcaattcattcatgcaacctcatgtttcctggataccagaaaagagtttagagccacaaatat-ggtgcaaaaggctgtc-acactgactctccattgagctgttaacacttaagccatccacagatggcaaaggtaaaagtgcactgtaacactcattctggggcttcagggattgtgagcacccttcaagatggtgccatg------------agttttgttcctgctggtgcccaaaaacactcaccctggtttctgcacctactcacctgcatgctccctcttgtgaggggttgagaactgcaggattagtaagtgaggcactcctgtcatgaggcctatgaaggggtcagagaaatatcctgcttcaaaattaataactcaacatcttttacagtagctgcaaaaagaaaa--------aagaaaaaaaaaaccttaggaatacatctaaccaaggaggtgaaagaccactacaaagaaaactacaaaacattgctgaaagaattcatagatgacacaaacaaatggaaacatatcccatgttcatggatgggtagaatcaatatagtgaaaatgatcatactgtcaaaagcaatctagccattcaatgcaattctcataaaaataccatcatcattcttcacacaactagaaaacgcaatcctaaaattcacatggaatccaaaaagagctcacatactcaaagcaagactaaacaaaaagaacaaatctggaggcatcacattacatgacttcaaactatactataatgccatagtcaccaaaacagcaaggtactggtataaaaacaggcacaaagaccaatggaacaggatagagaacacagaaataaatcaaaatacatacagtgaaccaatctttgacaaagcaaacagaaacatgaagtggggaaaggacatcctattcaacaaatggtgctaggataattgacaagccacatgtagaaggatgaaactggattctcatctctcaccttatgcaaaatctactcaagatggatcaaacacttaaatctaagacctaaaaccataacgattctagaagataacatcagaagaacccttctctacatttgcataggcaaagacttcctgacttagaacagaaaagtaaatgcaacaaacacaaagataagtagatggagt----ttaaactaaaaatcttctgcacagcaaaatgaataatcatcagagtaaacagacaacccacagagtggg-aaaaattttttgcaaactgtgcatctgaaaaagaactaatatccagactctacaaagaactcaaacaaatcagaaag-aaaacaaaaa--aaaaaatcccatcaaaaagtgggcaatggacataaatagataattctcaattt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21902608 1698 + 50472720 ccaaaatgcctgataccatggcccaaagtgagaacttacatcattgatttcccgcttgaatgttgccttttccaaaactactcaagtccttccccagccccatcctgtacagataaaaatcccatgctcagccaacaa---aagagaagcagctgttcctcagagactatggttgcatgtcaaagaggaacagcttaacttcaaaaagacaac-tgatggtgtagcttcagagaagaatccggccagagatggccagacttggagggaggattgccttcccaccctgtccccttttcaactccccatcccactaacagccaatttcatatgcaataacacccccgcctgcatttatcatcttcaattcattcatgcaacctcatgtttcctggatgccagacaagagctcggagccacaaatgtgggtgtaaaaggctgtcaacactgaccttctattgagctgttaacacttaaaccgt-cacagatggcaagggtgaaagtgcactgtaacactcattctggggtgtcaggggttgtgagcaccccctgagatgctgccatgaggcctgcacaaagttttgctcctgccattacccaaaagcactcgccctggcttctgcacccagctacctgcatgcttcctcttgtaaggggttgagaaccatgggatgaataagtgaggcactcctgtcatgaggctcatgaaggggtcagagaaatatcctgcttcaaaattaataactcaac-------acagtagctgc------aaaa--------aaaaaa----------taggaatacatgtaacaaagaaggtgaaag--tgctacaaggaaaactataaaatactactgaaaaaattcatagatgacacaaacaaatggaaatacacccaatgctcatggatgggtagaatcaacattgtgaaaatgcaagtactgtcaaaagcaatctagaaattcaatataattctagtaatagtatcatcattattcttcacagaactagaaaaagcaatcctaaaatttacatggaattaaaaaagagctcaaataccaaaagcaagactaaacaaaaggaacaaatctggaggcgtcacattacataaatttaaactatactataatgccatagccaccaaaacagcaaggtactggtgtaaaaataggcacatagactgatggaacagaatagagaacccagaaataaagccaaacacatacagccaaccaatccttgacaatgcaaacaaaaacataaagtggagaaaggatatcttagtcaacaaatggtgctggaataattggcaagccacatgtaaaaaaatgaaactggactctcatctctcaccttacgcaaaatcaactcaagacagatcaagcattttaatttgagacctaaaaccatgaagattctagaagataacatcagaagaacccttctagactttggcttaggcaaagacttcataccttagaacacaaaaggaaatgcaacaaaaacaaagataaatggatggagcttaattaaactaaaaaacttctgcacagcaaaagaaataatcagcagggtaaacagacaagccacaaagtggg-aaaaaatatttgcaaactatgcatctgacaaagaactagtatccagaatctacagaaaactca----aatcatcaag---aaaaaaat--aa--aatctcatcaaaaagtgggcaatggacatgaatagacaattctcaaaat i calJac3.chr21 I 10705 I 1 s cebCap1.NW_016107322v1 9586795 1697 - 14377064 ccaaaaaccctgatatcatggcccaaagtgagaacttacatcattgatttcccgctagaatgttgccttttccaaaactactcatgtccttccccagccccgtcctgtacagataaaaatcccaggttcagccaacaaaagaagagaagcagctgttcctcagagactatggttggatgtcagagaggaacagcttaacttcaaaaagacaac-tgatggtgtagcttcagagaagaatccggccagagatggccagagttcaagggaggattgccttcccaccctgtccccttttcaactccccatcccactaacagccaatttcataagcaataacccccc--cccgtatttatcatcttcaattcattcttgcaacctcatgtttcctggatgccagacaagagctcggagccacaaatgtgggcgtaaaaggctgtc-acactgaccttctattgaactgttaacacttaaaccatccacagatggcaagggtgaaaatgcactgtaacactcattctggggtgtcagggcttgtgagcatcccctgagatgctgccatgaggactgtacaaagttttgctcctgccattgcccaaaagcactcaccctggcttctgcacccacttatctgcatgcttcctcttgtgaggggttgagaactgtgggatgaataagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataactcaac-------acagtagctgcaaaaaaaaaa--------aaaaaa----------taggaatacatgtaacaaagaaggtgaaag--tgctacaaggaaaactacgatatactgctgaaaaaattcatagatgacacaaacaaatggaaatatacccaatgctcatggatgggtagaatcaatatagtgaaaatgcaaatactgtcaaaagcaatctagaaattcaatataattctagtaatagtgtcatcattattcttcacacaactagaaaaagcaatcctaaaatttacatggaactaaaaaagagctcaaataccaaaagcaagactaaacaaaaggaacaaatctggaggcatcacattacataaatttaaactatactataatgccatagtcaccaaaacagcaaggtactggtgtaaaaataggcacatagactgatggaacagaatagagaacccagaaataaagccaaatacatacaaccaaccaatcattgacaatgcaaacaaaaacataaagtggagaaaggatatcctattcaacaaatggtgttgggataattggtaagccacatgtaaaaaaatgaaactggaccctcatctctcaccttata-aatatcaactcaagatggatcaaacattttaatttgagacctaaaaccatgaagattctagaagataacatc---agaacccttctagacattggcttaggcaaagacttcatgccttagaacacaaaaggaaatgcaacaaaaacaaagataaatagatgaagcttaattaaactaaaaaacttctgcacaacaaaagaaataatcagcagagtaaacagacaagc--cagagtgggaaaaaaatatttgcaaactatgcatctgacaaagaactaatacccagaat---catcaaactca----aatcatcaag---aaaaaaat--aa--aatctcatcaaaaagtgggcaacggacatgaatagacaattctcaaaat i cebCap1.NW_016107322v1 I 9436 I 26 s aotNan1.NW_018487195v1 8723123 1684 + 9889416 ccaaaaagcctgataccatggcccaaagtgagaacttacatcattgatttcccgctcgaatgttgccttttccaaaactactcatgtccttccccagccccatcctgtacagataaaaatcccaggctcagccaacaaaagaagagaagcagctgttcctcagagactatggttggatgtcagagagtaacagcttaacttcaaaaagaaaac-tgatggtgtagcttcagagaagaatctgaccagagatggccagacttcaagggaggattgccttcccaccctgtccccttttcgactccccatcccactaacagccaatttcataagcaataacccc----cccgcatttatcatcttcaattcattcatgcaacctcatgtttcctggatgccagacaagagttcggagccacaaatgtgggtgtaaaaggctgtc-acactgaccttctattgagctgttaacac--aaaccgtccacagatggcaagggtgaaagcgcactgtaacactcattctggggtgtcaggggttgtgagcaccccctgagatgctgccatgaggtctgcacaaagttttgctcctgccattgcccaaaagcactcaccctggcttctgcacccacttacctgcatgcttcctcttgtgaggggttgaaaactgtgggatgaataagtgaggcactcctgtcatgaggcccatgaaggggtcagagaaatatcctgcttcaaaattaataactcgac-------acagtagctgc--aaaaaaaa--------aaaaaa----------taggaatacatgtaacaaagaaggtgaaag--tgctacaaggaaaactacgaaatactgctgaaaaaattcatagatgacacaaacaaatggaaatatacccaatgctcatggatgggtagaatcaatattgtgaaaatgcaaatactgtcaaaagcaatctagaaattcaatataatt-------tagtatcatcattattcttcacacaactagaaaaagcaatcctaaaatttacatggaactaaaaaagagctcaaataccaaaagcaagactaaacaaaaggaacaaatctggaggcatcacattacataaatttaaactatactataatgccatagtcaccaaaacagcaaggtactggtgtaaaaataggcacatagactgatggaacagaatagagaacccagaaataaagccagatacata--------caatctttgacaatgcaaacaaaaacataaagtggagaaaggatatcctattcaacaaatggtgctgggataattggcaagccacatgtaaaaaaaagaaactggaccctcatccctcaccttatacaaaatcaactcaagacagatcaaacattttaatttgagacctaaaaccatgaagattctagaagataacatcagaagaacccttctagacattggcttaagcaaagacttcatgccttagaacacaaaaggaaatgcaacaaaaacaaagataaatagatggagcttaattaaactaaaaaacttctgcacagcagaagaaataatcagcagagtaaacagacaagccacagagtgga-aaaaaatatttgcaaactatgcatctgacaaagaattaatatccagaatctacaaaaaactca----aatcatcaag---aaaaaaat--aa--aatctcatcaaaaaatgggcaatggacatgaatagacaattctcaaaat i aotNan1.NW_018487195v1 I 22431 I 35 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e saiBol1.JH378168 5004883 9780 + 13128814 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=101953.000000 s hg38.chr21_KI270874v1_alt 40635 23 + 166743 tggccatatacaatggtcatat-----------------a s panTro5.chr21 3665150 23 + 33445071 tggccatatacaatggtcatat-----------------a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17292065 23 + 46275980 tggccatatacaatggtcatat-----------------a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3231121 23 - 13858734 tggccatatacaatggccatat-----------------a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4413330 39 + 32716333 tggccatatacaagggccatatacaaatggcc-aaaaaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155368031 39 - 185818997 gggccatatacaatggccatatacaaatggcc-aaaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162190727 26 - 192294377 g-------------ggccatatacaaatggcc-aaaaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8668736 39 + 9440265 gggccatatacaatggccatatacaaacggcc-aaaaaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8399760 39 + 21915920 gggccatatacaatggccatatacaaatggcc-aaaaaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14976207 40 - 90373283 gggccatatacaatggccatatacaaatggtcaaaaaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2143834 39 + 4234846 gggccatatacaatggccatatacaaatggcc-aaaaaaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 150497 39 - 13750039 gggccatatacaatggccatgtacaaatggcc-aaaaaaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21904307 24 + 50472720 -------------tgtatatatacaaatggca-aaaaa-- i calJac3.chr21 I 1 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8724807 35 + 9889416 I e cebCap1.NW_016107322v1 9588492 26 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=5258.000000 s hg38.chr21_KI270874v1_alt 40658 7 + 166743 catataa---- s panTro5.chr21 3665173 7 + 33445071 catataa---- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17292088 7 + 46275980 catataa---- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3231144 7 - 13858734 catataa---- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4413369 7 + 32716333 catataa---- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155368070 6 - 185818997 catat-a---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162190753 6 - 192294377 catat-a---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8668775 6 + 9440265 catat-a---- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8399799 6 + 21915920 catat-a---- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14976247 6 - 90373283 catat-a---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2143873 6 + 4234846 catat-a---- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 150536 5 - 13750039 -atat-a---- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21904331 9 + 50472720 aatat-tt-ta i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9588518 10 - 14377064 catat-tcaaa i cebCap1.NW_016107322v1 I 26 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8724807 35 + 9889416 I e saiBol1.JH378168 5004883 9780 + 13128814 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=6109100.000000 s hg38.chr21_KI270874v1_alt 40665 718 + 166743 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacattgccataccataccaccttactcctacaagaatggccataatttaaaattc-aaaaattgtaaattttggtatagatgtggtgaaaagcaaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatacagtatggaaagcccctgaagaact-aaaaatagatctaccacttgatacagcaattctactactgggtatctactcagaggaaaagaagtcatgatatcaacaagacacttgcacacacctgtttgtgacagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtgg--tatgtatatatcatggaatactactcagtcatataatggaataaaataatggcatttgcagcaacctggatatagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacatcatatgttctcacttgtatgtgggagctaagctatgaggatgcaaaggcatatgaaagatacaatggactttggggactcagg---aagggagagggggtgagggataaaagactacacattgggtgcagtgtacactgcttggatgatgagtgcaccaaaatctcagaaatcaccactaaagaacttgtttacataac s panTro5.chr21 3665180 718 + 33445071 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacattgccataccataccaccttactcctacaagaatggccataatttaaaattc-aaaaattgtaaattttggtatagatgtggtgaaaaggaaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatacagtatggaaagtccctgaagaact-aaaaatagatctaccacttgatacagcaattctactactgggtatctactcagaggaaaagaagtcatgatatcaacaagacacttgcacacacctgtttgtggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtgg--tatgtatatatcatggaatactactcagtcatataatggaataaaataatggcatttgcagcaacctggatatagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacatcatatgttctcacttgtatgtgggagctaagctatgaggatgcaaaggcatatgaaagatacaatggactttggggactcagg---aagggagagggggtgagggataaaagactacacattgggtgcagtgtacactgcttggatgatgagtgcaccaaaatctcagaaatcaccactaaagaacttgtttacataac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17292095 718 + 46275980 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacattgccataccataccaccttactcctacaagaatggccataatttaaaattc-aaaaattgtaaattttggtatagatgtggtgaaaaggaaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatacagtatggaaagtccctgaagaact-aaaaatagatctaccacttgatacagcaattctactactgggtatctactcagaggaaaagaagtcatgatatcaacaagacacttgcacacacctgtttgtggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtgg--tatgtatatatcatggaatactcctcagtcatataatggaataaaataatggcatttgcagcaacctggatatagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacatcatatgttctcacttctatgtgggagctaagctatgaggatgcaaaggcatatgaaagatacaatggactttggggactcagg---aagggagagggggtgagggataaaagactacacactgggtgcagtgtacactgcttggatgatgagtgcaccaaaatctcagaaatcaccactaaagaacttgtttacataac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3231151 717 - 13858734 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacattgccataccataccaccttactcctacaagaatggccataattaaaaattc-aaaaattataaattttggtatagatgtggtgaaaagggaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatgcagtatggaaagtccctgaagaact-aaaaatagatctaccatttgatacagcaattctactaccgggtatctactcagaggaaaagaattcatgatatcaacaagacacttgcacacacctg-ttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtagtaaagaaaatgtgg--tatgtatatatcatgggatactactcagtcatataatggaataaaataatggcatttgcagcaacctggatatagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacatcgtatgttctcacttgtatgtgggagctaagctatgaggatgcaaaggcatatgaaagatacaatggactttggggacttgag---aagggagaggggatgagggataaaagactacacattgggtgcagtgtacactgcttggatgatgagtgcaccaaaatctcagaaatcaccactaaagaacttgttcacataac i gorGor5.CYUI01015003v1 C 0 I 15 s nomLeu3.chr25 4413376 718 + 32716333 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccataccaccttactcctacaaggatggtcataattaaaaattc-aaaaattataaattttggtatagatgtggtgaaaagggaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatacagtatggaaagtccctaaagaact-aaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaagaagtcatgatatgaacaagacacttgcacacacctgtttatggcaacacattcacaattgaaaaaatatggaaccagcccaaatgcctattaatcaacaagcggtaaagaaaatgtgg--tatgtatatatcatggaatactactcagtcatataatggaataaaataatggcatttgcagcaacccggatgtagttggagaccattattctaagtgaattaactcaggaatggaaaactaaacatcatatgttctcacttgtaaatgggagctatgctatgaggatgcaaaggcatacgaaagatacaatggaccttggggactcggg---aagggagagggggtaagggataaaagactacacattgggtgcagtgtacactgcttggatgacaagtgcaccaaaatctcagaaatcaccactaaagatcttgttcacataac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155368076 721 - 185818997 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtatagatgtgatgaaaagggaacacttttacactgctattgggaacgtaaactagcacaaccactgtggaatacagtttggaaagtctctaaagaact-aaaaatagatctaccatttgatacagcaattctactactgggtatctactcaggggaaaataagttattatatgaacaagacacttgcacacacctatttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtgg--tatgtatatatcatggaaaactactcagtcatataaaggaataaaataatggcatttgcaaccacctggatgtagttggtgaccattattctaagtgaattaactgaggaatggaaaaccaaacattgtacgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttgggggaaagggaagggggatgaggaataaaagactacacattgggtgcagtgtacactgctcagataatgagtgcacc-aaatctcagaaatcaccactaaagaacttgttcacgtaac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162190759 718 - 192294377 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtatagatgtgatgaaaagggaacacttttacactgctattgggaacgtaaactagcacaaccactgtggaatacagtttggaaagtctctaaagaact-aaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaataag---ttatatgaacaagacacttgcacacacctatttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtgg--tatgtatatatcatggaaaactactcagtcatataaaggaataaaataatggcatttgcaaccacctggatgtagttggtgaccattattctaagtgaattaactgaggaatggaaaaccaaacattgtacgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttggggggaagggaagggggatgaggaataaaagactacacattgggtgcagtgtacactgctcagataatgagtgcacc-aaatctcagaaatcaccactaaagaacttgttcacgtaac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8668781 721 + 9440265 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtatagatgtgatgaaaagggaacacttttacactgctattgggaacgtaaactagcacaaccactgtggaatacagtttggaaagtctctaaagaact-aaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaataagttattatatgaacaagacacttgcacacacctatttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtgg--tatgtatatatcatggaaaactactcagtcatataaaggaataaaataatggcatttgcaaccacctggatgtagttggtgaccattattctaagtgaattaactgaggaatagaaaaccaaacattgtacgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttggggggaagggaagggggatgaggaataaaagactacacattgggtgcagtgtacactgctcagataatgagtgcacc-aaatctcagaaatcaccactaaagaacttgttcacgtaac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8399805 721 + 21915920 aaaatgcttaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtatagatgtgatgaaaaggaaacacttttacactgctattgggaacgtaaactagcacaaccactgtggaatacagtatggaaagtctctaaagaact-aaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaataagttattatatgaacaagacacttgcacacacctatttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtgg--tatatatatatcatggaaaactactcagtcatacaaaggaataaaataatggcatttgcaaccacctggatgtagttggtgaccattattctaagtgaattaactgaggaatggaaaaccaaacattgtatgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttggggggaagggaagggggatgaggaataaaagactacacattgggtgcagtgtacactgctcagataatgagtgcacc-aaatctcagaaatcaccactaaagaacttgttcacgtaac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14976253 721 - 90373283 aaaatgctcaacatcactaattttcaggaaaatgcaaatcaaaaccacaatgccataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtatagatgtgatgaaaagggaacacttttacactgctattgggaacgtaaactagcacaaccactgtggaatacagtatggaaagtctctgaagaact-aaaaatagatctaccattcgatacagcaattctactactgggtatctactcagaggaaaataagttattatatgaacaagacacttgcacacacctatttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtgg--tatgtatatatcatggaaaagtactcagtcatataaaggaataaaataatggcatttgcagccacctggatgtagttggtgaccattattctaagtgaattaactgaggaatggaaaaccaaacattgtatgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttggggggaagggaaggaggatgaggaataaaagactacacattgggtgcagtgtacactgctcagataatgagtgcacc-aaatctcagaaatcaccactaaagaacttgttcatgtaac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2143879 723 + 4234846 aaaatgctcaacatcacgaattttcaggaaaatgcaaatcaaaaccacaatgccataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaatgttggtttggatgtgatgaaaagggaacacttttacactgctattgggaacgtaaactagcacaaccactgtggaatacagtatggaaagtctctaaagaact-aaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaataagttatcatatgaacaagacacttgcacacacctatttatggcagcacattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaacaagtggtaaagaaaatgtggtatatatatatatcatggaaaactactcagtcatacaaaggaataaaataatggcatttgcaaccacctggatgtagttggtgacaattattctaagtgaattaactgaggaatggaaaaccaaacattgtatgttctcacttgtaagtgggagttaagctatgaggatgcaaagacatacaaatgatacagtagactttggggacttggggggaagggaagggggatgaggaataaaagactacacattgggtgcagtgtacactgctcagataatgagtgcacc-aaatctcagaaatcaccactaaagaacttgttcacgtaac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 150541 721 - 13750039 aaaatgctcaacatcactaattttcagaaaaatgcaaatcaaaaccacaatgctataccatgccaccttattcctacaagaatggccataattaaaaattcaaaaaataataaattttggtatagatgtgatgaaaaaggaacacttttacactgctattgggaatgtaaactagcacaaccactgtggaatacagtatggaaagtctctaaagaact-aaaaatagatctaccatttgatacagcaattctactactgggtatctactcagaggaaaataagtcattatatgaacaagacacttgcacacacctgtttatggcagcatattcacaattgcaaaaatatggaaccagcccaaatgcccatcgatcaagaagtggtaaagaaaatgtgg--tatgcatatatcatggaaaactactcagtcatataaaggaataaaataatggcatttgcagccacctggatgtagttggagaccattattctaagtgaattaactcaggaatggaaaaccaaacattgcatgttctcacttgtaagtgggagttaaacgatgaggatgcaaagacatacgaatgatacagtggactttggggacttagggg-aagggagaggggatgatgaataaaagactacacattgggtgcagtgtacactgcacagataatgagtgcaccaaaatctcagaaatcaccactaaagaacttgttcacgtaac i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21904340 716 + 50472720 aaaatgctcaacatcactaattatcaggaaaacacaaatcaaaaccacaatgccatatcatgccaccttactcctgcaagaatggccataattaaaaattcaaaaaataataaattttggtgtcaatacggtaaaaagaaaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatactgtatggagacttcctaaaaatct-aaaaatagatctaccatttggtacagcaattttactactggttgtctactcagaagaaaagaagtcattatatggacaagacacttgcacacacctgtttgtggcagtatattcccaactgcaaaaatatggaaccagctcaaaagaccattgatcaacaaattgtaaagaaaatgtgg--tatgtatatatcatggaatactactcattcataaaaagtaataaaataatggcatttccagcaacct-gatgtagttggagacttttattctaagtgaactaacacaggaatggaaaaccaaatatcatatgttctcacttgtaagtgggagttaaactaggaggatgcaaaggcatacaaatgatacaatggatgttggggactcaaggggaaggtaggg-----gaggaatgaaagactatacattggatacagtgtacactactcagatgattggtgcaccaaaatctcagaaatcaccactaaagaacttgttcatgcaac i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9588528 717 - 14377064 aaaatgctcaatatcattaattatcaggaaaacacaaatcaaaaccacaatgccatatcataccaccttactcctgcaagaatggccataattaaaaattcaaaaaataataaattttggtgtcaatgtggtaaaaaggaaacacttttacactgctgttgggaatgtaaactagcacaaccactatggaatacagtatggagacttcctaaaaatctaaaaaatagatctactatttggtacagcaattttactactgtgtgtcttctcagaagaaaagaagtcattatatggacaagacacttgcacacacctgtttgtggcagtatattcacaactgcaaaaatatggaaccagctcaaatgcccactgatcaacaaatagtaaagaaaatgtgg--tatgtatatatcatgaaatactactcattcataaaaagtaataaaataatggcatttccagcaacct-gatgtagttggagacctttattctaagtgaactaacacaggaatggaaaaccaaacatcatatgttttcgcttgtaagtgggagctaaactatgaggatgcaaaggcatacaaatgatacaatggatgttggggactcaggtggaaggtaggg-----gaggaataaaagactatacattgggtacagtgtacactgctcagatgactggtgtaccaaaatctcagaaatcaccactaaagaatttgttcatgaaac i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8724842 705 + 9889416 aaaatgctcaacatcactaattatcaggaaaacacaaatcaaaaccacaatgccatatcataccaccttactcctgcaagaatggccataattaaaaactcaaaaaataataaattttggtgtcaatgtggtaaaaaagaaacacttttacactgctgttgagaacgtaaactagcacaaccactatggaatacagtatggagacttcctaaaaatct-aaaaatagatctaccatttggtacagcaattttacta-----------ctcagaagaaaagaagtcattatatggacaagacacttgcacacacctgtttgtggcagtatattcacaactgcaaaaatatggaaccagctcaaatgcccactgatcaacaaatggtaaagaaaatgtgg--tatgtatatatcatggaatactacttatttataaaaagtaataaaataacggcatttccagcaacct-gatgtagttggagacctttattctaagtgaactaacacaggaatggaaaaccaaacatattatgttctcgcttgtaagtgggagttaaactatgaggatgcaaaggcgtacaaatgatacaatggatgttggggactcagggggaaggtaggg-----gaggattaaaagactatacattgggtacagcgtacactgctcagatgattggtgcaacaaaatctcagaaatcaccactaaagaacttgttcatgtaac i aotNan1.NW_018487195v1 I 35 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e saiBol1.JH378168 5004883 9780 + 13128814 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=50557.000000 s hg38.chr21_KI270874v1_alt 41383 6 + 166743 cagaca s panTro5.chr21 3665898 6 + 33445071 cagaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17292813 6 + 46275980 cagaca i panPan2.chr21 C 0 C 0 s nomLeu3.chr25 4414094 6 + 32716333 cagaca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155368797 6 - 185818997 cagaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162191477 6 - 192294377 cagaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8669502 6 + 9440265 cagaca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8400526 6 + 21915920 cagaca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14976974 6 - 90373283 caggca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2144602 6 + 4234846 cagaca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 151262 6 - 13750039 cagaca i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21905056 6 + 50472720 cagaca i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9589245 6 - 14377064 cagaca i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8725547 6 + 9889416 cagaca i aotNan1.NW_018487195v1 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e saiBol1.JH378168 5004883 9780 + 13128814 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I e gorGor5.CYUI01015003v1 3231868 15 - 13858734 I a score=14719109.000000 s hg38.chr21_KI270874v1_alt 41389 1674 + 166743 ccacctgttccccaaaaacctatttgaaataaaaaTAATACttgaaataaacttaaaaaggaataaatggaagggcattaatgtatggattggaagacttagtactgttgcaatagcaatactccccaaattgatctatagattcaatgcaattcttatgaaagtgtcagctgc--cttttttagaaattggcaaaaagatcttaagattcacatggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaacttaatacaaagtgcccataatcaatatagtatggtacttgcataaggacagacatacaggtcaatggaatgaaattttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaatacatctttaaaaaaagacactaagacaactggatataatgcacaagaatgaaattgggctcctatctc---acacaatatataagcattaatttttt-taagaagagcagagtatgaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacactttatcaaagtatttttgcatttcaaaggaaaacatgaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgataggagatttgtatccagaatatttaaagaattcttgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacagtgacaagaattagtgaggataattgaaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctcctt--aaaaaaagttaaacacaaagttaccatttgatcaagcagtttcactcctaagtatataatcaagagaattaaaagcacatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaactgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataacatggatgacctttaaaacattatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagagtaggtaaatccataaagacaaaaagtcattcagtggttgccaggacctaggaggtatgggagaatggagagaattgctaaagggcatgagctttcctttgggatgataaaaatattctTTT--------AAAAAAACTGtatgag----gtacaagttcaattttattacatgcataaattatgttgtggtgaagtcaaggctttcagggtattcatcacccaaataa s panTro5.chr21 3665904 1674 + 33445071 ccacctgttccccaaaaacctatttgaaataaaaaTAATACttgaaataaacttaaaaaggaataaatggaagggcattaatgtgtggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagattcaatgcaattcttatgaaagtgtcagctgc--cttttttagaaattggcaaaaagatcttaagattcacatggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccacttccaatttccaaacttaatacaaagtgcccataatcaatatagtatggtacttgcataaggacagacatacaggtcaatggaatgaaaatttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaatacatctttaaaaaaagacgctaagacaactggatataatgcacaagaatgaaattgggctcctatctc---acactatatataagcattaatttttt-taaaaagagcagagtatgaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacaatttatcaaagtatttttgcatttcaaaggaaaacatgaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgataggagatttgtatccagaatatttaaagaattcttgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacaatgacaagcattagtgaggataattgaaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctcctt--aaaaaaagttaaacacaaagttaccatttgatcaagcagtttcactcctaagtatataatcaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatctcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaactgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaacataatacatgttataacatggatgacctttaaaacattatgctaagtaaaagaagccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagagtaggtaaatccataaagacaaaaagtcgttcagtggttgccaggacctagaaggtatgggagaatggagagaattgctaaagggcatgagctttcctttgggatgataaaaatattctTTT--------AAAAAAACTGtatgag----gtacaagttcaattttattacatgcataaattatgttgtggtgaagtcaaggctttcagggtattcatcacccaaataa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17292819 1674 + 46275980 ccacctgttccccaaaaacctatttgaaataaaaaTAATACttgaaataaacttaaaaaggaataaatggaagggcattaatgtgtggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagattcaatgcaattcttatgaaagtgtcagctgc--cttttttagaaattggcaaaaagatcttaagattcacatggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaagactcccacttccaatttccaaacttaatacaaagtgcccataatcaatatagtatggtacttgcataaggacagacatacaggtcaatggaatgaaattttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaatacatctttaaaaaaagacgctaagacaactggatataatgcacaagaatgaaattgggctcctatctc---acactatatataagcattaatttttt-taaaaagagcagagtatgaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacaatttatcaaagtatttttgcatttcaaaggaaaacatgaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgataggagatttgtatccagaatatttaaagaattcttgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacaatgacaagcattagtgaggataattgaaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaacgtgtcagctcctt--aaaaaaagttaaacacaaagttaccatttgatcaagcagtttcactcctaagtatataatcaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatctcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaactgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaacataatacatgttataacatggatgacctttaaaacattatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagagtaggtaaatccataaagacaaaaagtcgttcagtggttgccaggacctagaaggtatgggagaatggagagaattgctaaagggcatgagctttcctttgggatgataaaaatattctTTT--------AAAAAAACTGtatgag----gtacaagttcaattttattacatgcataaattatgttgtggtgaagtcaaggctttcagggtattcatcacccaaataa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3231883 1668 - 13858734 ccacctgttccccaaaaacctatgtgaaataaaaaTAATACttgaaataaacttaaaaaggaataaatggaaaggcattaatgtatgga-tggaagacttagtattgttgcaatagcaatactccccaaattgatctatagatttaatgcaattcttatgaaagtgtcagctgc--cttttttagaaattggcaaaaagatcttaagattcacatggatgcaagggacccagaatagctaaaacaatctctaaacggaaggacaaagttggaggacccccatttccaatttccaaacttaatacaaagtgcccataatcaatatagtatggtacttgcataaggacagacatacaggtcaatggaatgaaattttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaatacatctttaaaaaaagacactgagacaacaggatacaatgcacaagaatgaaattgggctcctatctc---acactatatataagcattaattttttaaaaaaagagcagagtatgaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagccataataaacagataaaattacactttatcaaagtatttttgcatttcaaaggaaaacatgaagaaagtgaaaaaacccacagaatgggaacattattcgcaaattgtatatctgataggagatttgtatccagaatatttaaagaattcttgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacaatgacaagcattagtgaggataattgaaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctcctt--aaaaaaagttaaacacaaagttaccatttgatcaagcagtttcactcctaagtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaactgatgaatggataaataaaatgtgtcagatctatacaatgaaatattattcagcaatgaaaagaaatg-----taatacatgttataacatggatgacc-ttaaaacattatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagagtaggtaaatccagaaagacaaaaagtcattcagtggttgccaggacctaggaggtatgggagaatggagagaattgctaaggggcatgagctttcctttgggatgataaaaatattctTTT--------AAAAAAACTGtatgag----gtacaagttcaattttattacacgcataaattatgttgtggtgaagtcaaggctttcagggtattcatcacccaaataa i gorGor5.CYUI01015003v1 I 15 C 0 s nomLeu3.chr25 4414100 1661 + 32716333 caacctgttccccaaaaacctatttgaaataaaaaTAATACttgaaataaacttaaaaaggaacaaatggaagggcattaatgtatggattagaagacttagtattgttgcaatagcagtactccccaaattgatctatagattcaatgcaattcttatgaaagtgtcagctgc--cttttttagaaattggcaaaaagatcttaagattcacgtggatgcaagggatccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaacttcatacaaagtgctcataatcaatatagtatggtacttgcataaggacagacatacaggtcaatggaatgaaattttgaatccagaaatgcatgcttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaaaaaagacactgagacaaccggatataatgtacaagaatgaaattgggctcctatctc---acactatatatacgcattaatttttt--aaaaagagcagagtatgaattatgagagttaaaactataaaactctaagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacactttatcaaagtatttttgcatttcaaaggaaaacatgaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgataggagatttgtatccagaatatttaaagaattcttgtaactcaac-acaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaacgacagacaatgacaagcattagtgaggataattgaaaccttcatacaatgctggtggaaattttaaattattcagccacttttgaaaacaatgtgtcaggtcctt--aaaaaaagttaaacacaaagttaccatttgatcaagcagtttcactcctaagtacataaccaagagcattaaaa-cctatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgcaatacatgttata---------acctttaaaacattatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatgaatccttttatatacaaggtagcgtaggtaaatccataaagacaaaaagtcaatcagtggtttccaggtcctaggaggtatgggagaatggagagaattgctaaagggcgggagctttcctttgggatgataaaaatattctTTT--------TAAAAaaatgtatgag----gtacaagttcaattttattatatgcataaattatgttgtggtgaagtcaaggctttca-ggtattcatcacccaaataa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155368803 1675 - 185818997 ccacctgtt-cccaaaaacccattagaaataaaaaTAATACttgaaataaactaaaaaggaagtgaatggaagggcattaatgtatggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagatttgatgcaattttaatgaaagtgtcagctgc--cttttttagaaattcacaaaatgatcttaaaattcacgtggatgcaagggacccagaatagctaaaacaacctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaatttaatacaaagtgcccacaatcaatatagcatggtacttgcataaggacagacatacaggccaatggaatgaaattttgaatccaaaaatgcacccttctatttttggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaagaatgacacagagacaactggatataatgcacaagaatgaaattaggcccctatccc---acactgtatataagcattaattttta-aaaaaagagcagagtattaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacataatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaatatttaaagaattcttgtaacgcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacaggcaatgacaagcattagtgagaataattggaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaacgtgtcagctcctttaaaaaaaagttaaacataaagttaccatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagatcacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataatgtggatgacctttaaaactttatgctaagtaaaagaggccagaaacaaaaaggccacatactgtatggatccttttatatacgaggtagagtagttaaatctataaagacaaaaagtcagtcagtggttgccaggacttaggaagtatgggagaaaggagagaattgctaaagggcatgagctttcctttgggatgataaaaatactctTTT--------AAAAGaaatgtatgag----gtacaagtgcaattttattacatgcatagattatgttgtagcgaagtcaaggctttcagggtatccatcacccaaataa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162191483 1675 - 192294377 ccacctgtt-cccaaaaacccattagaaataaaaaTAATACttgaaataaactaaaaaggaggtgaatggaagggcattaatgtatggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagatttgatgcaattttaatgaaagtgtcagctgc--cttttttagaaattcacaaaatgatcttaaaattcacgtggatgcaagggacccagaatagataaaacaacctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaatttaatacaaagtgcccacaatcaatatagcatggtacttgcataaggacagacatacaggccaatggaatgaaattttgaatccaaaaatgcacccttctatttttggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaagaatgacacagagacaactggatataatgcacaagaatgaaattaggcccctatccc---acactgtatataagcattaattttta-aaaaaagagcagagtactaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacataatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaatgtttaaagaattctcgtaactcaccaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacaggcaatgacaagcattagtgagaataattggaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaacgtgtcagctcctttaaaaaaaagttaaacataaagttaccatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagatcacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataatgtggatgacctttaaaactttatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatggatccttttatatacgaggtagagtagttaaatctataaagacaaaaagtcagtcagtggttgccaggacttaggaagtatgggagaaaggagagaattgccaaagggcatgagctttcctttgggatgataaaaatactctTTT--------AAAAGaaatgtatgag----gtacaagtgcaattttattacatgcatagattatgttgtagcgaagtcaaggctttcagggtatccatcacccaaataa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8669508 1675 + 9440265 ccacctgtt-cccaaaaacccattagaaataaaaaTAATACttgaaataaactaaaaaggaagtgaatggaagggcattaatgtatggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagatttgatgcaattttaatgaaagtgtcagctgc--cttttttagaaattcacaaaatgatcttaaaattcacgtgaatgcaagggacccagaatagctaaaacaacctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaatttaatacaaagtgcccacaatcaatatagcatggtacttgcataaggacagacatacaggccaatggaatgaaattttgaatccaaaaatgcacccttctatttttggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaagaatgacacagagacaactggatataatgcacaagaatgaaattaggcccctatccc---acactgtatataagcattaattttta-aaaaaagaccagagtattaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacataatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaatatttaaagaattctcgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacaggcaatgacaagcattagtgagaataattggaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaacgtgtcagctcctttaaaaaaaagttaaacataaagttaccatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagatcacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataatgtggatgacctttaaaactttatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatggatccttttatatacgaggtagagtagttaaatctataaagacaaaaagtcagtcagtggttgccaggacttaggaagtatgggagaaaggagagaattgctaaagggcatgagctttcctttgggatgataaaaatactctTTT--------AAAAGAAATGTATAAg----gtacaagtgcaattttattacatgcatagattatgttgtagcgaagtcaaggctttcagggtatccatcacccaaataa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8400532 1672 + 21915920 ccacctgtt-cccaaaaacccattagaaataaaaaTAATACttgaaataaactaaaaaagaagtgaatggaagggcattaatgtatggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagatctgatgcaattttaatgaaagtgtcagctgc--cttttttagaaattcacaaaatgatcttaaaattcacgtggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaatttaatacaaagtgcccacaatcaatatagcatggtacttgcataaggacagacatacaggccaatggaatgaaattttgaatccaaaaatgcacccttttatttttggtaaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaagaatg--acagagacaactggatataatgcacaagaaagaaattaggcccctatccc---acactgtatataagcattaattttt--aaaaaagagcagagtattaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacataatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaatatttaaagaattctcgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacaggcaatgacaagcattagtgaggataattggaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctcctttaaaaaaaagttaaacacaaagttaccatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagatcacaagtggaaacaatccaaatgtctatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataatgtggatgacctttaaaactttatgctaagtaaaagaggccagaaacaaaaaggccacatattgtatggatccttttatatacgaggtagagtagttaaatctataaagacaaaaagtcagtcagtggttgccaggacttaggaagtatgggagaaaggagagaattgctaaagggcatgagctttcctttgggatgataaaaatactctTTT--------AAAAGaaatgtatgag----gtacaagtgcaatgttattacatgcatagattatgttgtagcgaagtcaaggctttcagggtatccatcacccaaataa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14976980 1674 - 90373283 ccacctgtt-cccaaaaacccattagaaataaaaaTAATACttgaaataaactaaaaaagaagtgaatagaagggcattaatgtatggattggaagacttagtattgttgcaataccaatactccccaaattgatctatagatttgatgcaattttaatgaaagtgtcagctgc--cttttttagaaattcacaaaatgatcttaaaattcacgtggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaatttaatacaaagtgcccacaatcaatatagcatggtacttgcataaggacagacatacaggccaacagaatgaaattttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagttcaatgagcaaaaattcatctttaaagaatgacacagagacaactggatataatgcacaagaatgaaattaggcccctatccc---acactgtatataagcattaattttt--aaaaaagagcagagtattaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaatatttaaagaattctcataactcaacaacaaaaagacaaataacccaatttaaaaatagataaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacaccattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacagacaatgacaagcattagtgaggataattggaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctccttttaaaaaaagttaaacacaaagttaccatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagaccacaagtggaaacaatccaaatgtccatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttacaatgtggatgacctttaaaactttatgctaagtaaaagagaccagaaacaaaaaggccatatattgtatgaatccttttatatacaaggtagagtagttacatccataaagacaaaaagtcagtcagtggttgccaggacctaggaggtatgggagaaagaagagaattgctaaaaggcatgaactttcctttgggatgatgaaaatactctttt--------aaaagaaatgtatgag----gtacaagtgcaattttattacatgcatagattatcttgtagcaaagtcaaggctttcagggtatccatcacccaaataa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2144608 1674 + 4234846 ccacctgtt-cccaaaaacccattagaaataaaaGTAATACttgaaataaactaaaaaagaagtgaatggaagggcattaatgtatggattggaagacttagtattgttgcaatagcaatactccccaaattgatctatagatctgatgcaattttaatgaaagtgtcagctgc--cttttttagaaattcacaaaatgatcttaaaattcacgtggatgcaagggacccagaatagctaaaacaatctctaaaaggaaggacaaagttggaggactcccatttccaatttccaaatttagtacaaagtgcccacaatcaatatagcatggtacttgcataaggacagacatacaggccaatggaatgaaattttgaatccaaaaatgcacccttctatttttggtgaattgattttcacaagggtaccaaagaagttcaataagcaaaaattcatctttaaagaatgacacagagacaactggatataatgcacaagaatgaaattaggcccctatccc---acactgtatataagcattaattttt--aaaaaagagcagagtattaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattacacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacataatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaatatttaaagaattctcgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatacttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactaagatggttataatcaaaaggacaggcaatgacaagcattagtgaggataattggaaccttcatacaatgctggtggaaattttaaattatgcagctacttttgaaaacaatgtgtcagctcctttaaaaaaaagttaaacacaaagttaccatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagatcacaagtggaaacaatccaaatgtctatcaattgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataatgtggatgacctttaaaactttatgctaagtaaaagaggccggaaacaaaaaggccacatactgtatggatccttttatatacgaggtagagtagttaaatctataaagacaaaaagtcagtcagtggttgccaggacttaggaagtatgggagaaaggagagaattgctaaagggcatgagctttcctttgggatgataaatatactctTTT--------AAAAGaaatgtatgag----gtacaagtgcaattttattacatgcatagattatgttgtagcgaagtcaaggctttcagggtatccatcacccaaataa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 151268 1674 - 13750039 ccacctgtt-cccaaaaacccatttgaaataaaaaTAATACttgaaataaactaaaaaagaagtgaatagaagggcattaatgtatagattagaagacttagtattgttgcaatagcaatactccccaaatttatctatagatttgatgcaattttaatgaaagtgtcagctgc--cttttttagaaattcacaaagtgatctaaaaattcacgtggatacaagggaaccagaatagctagaacaatctctaaaaggaaggacaaagttggaggactctcatttccaatttccaaatttaatacaaagtgcccataatcaatatagcatggtacttgcataaggacagacatacaggccaatggaatgaaattttgaatccaaaaatgcacccttctatttatggtgaattgattttcacaagggtaccaaagaagctcaatgagcaaaaattcatctttaaagaatgacacagagacaactggatataatgcacaagaatgaaattgggcccctatctcacaacactgtacataagcattaattttt---aaaaacagcagagtattaagtatgagagttaaaactataaaactcttagaagtcaacatagtagtaaatctttgtgaccttgaattaggcaatgattttctagttatgaaaccaaaagcaataataaacagataaaattatacctcatcaaagtatttttgcatttcaaaggaaaacatcaagaaagtgaaaaaacccacagaatgggagcattatttgcaaattgtatatctgatgggagatttgtatccagaacatttaaagaattctcgtaactcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagctatttctgcaatatacaa-----gtggtcaataagcacatgaaaagacatttaacatcattaatcattagggaaatgcaaattaaaacaacaatgtgatacaaatttgcacatactaagatggttataatcaaaaggacagacaatgacaagcattagtgaggataattggaaccttcatacaatgctggtggaaattttaaattatgcagccacttttgaaaacaatgtgtcagctccttt-aaaaaaagttaaacacaaagttaccatttgatcaagcaatttcactcctaagtatataaccaggagaattaaaa-tatatgtctacacaaaatcttgcagagaaatgtcatagcagcattattcataatagaccacaagtggaaacagtccaaatgtccaccaactgatgaatggataaataaaatgtgtcagatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttataatgtggatgacctttaaaactttatgctaagtaaaagaggccagaaacaataaggccacatattgtatgaatccttttatacataaggtagagtagttaaatctataaagacaaaaagtcagtcagtggttgccaggacctaggaggtatgggagaaaggagagaattgctaaagggcatgagctttcctttgggatgataaaaatactctttt--------aaaagaaatgtatgag----gtacaagtgcaattttattacatgcatagattacgttgtagtgaagtcaaggctttcagggtatccatcacccaaataa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21905062 1653 + 50472720 ccacctgttccccaaaaacctatt-gaaataaaaaTAatcattgaaataaactaaaaaagaaataaatggaagggcattaatgtatggattggaagacttaatattgttacaatagcaatactccccaaattgatctacagatttgatgcaattcctatgaaagggtcagctgc-ttttttctagaaattggcaaaatactcttaaaattcacatggatgcaagggatccaaagtagctaaaacaatctctaaaa-gaaggacaaaattgtaggattcccatttccaatttccaaatttaatacaaagttcccataatcaatacagtatggcacttccataagaacagacatataggtcaatgaaatggaattttgaatcaaaaaatgcacccttccacttatggtgaattgattttcacaagggtaccaaagaagttcagtaagcaaaaatgcatctttaaaaaatgacactgagacaactggacataatgcacaagaatgtaactgggtacctatctc---acactatatataagcattcatttttt-aaaaaggaacagagtattaaatatgagagttaaaactttaaaactcttttaagttaacatagtagtaaatctttgtggccttgaattaggcaatg------tagttatgaaaccaaaagcaataaaaaatagataaaattatacttcatcagagtatttttgcatttcaaaggacaacatcaagaaagtgaaaacacccacagaatgggagcattatttgcaaattgtatatctgataggggattcatatccagaatctttaaagaattcttgtaattcaataacaaaaagacaaataatccaatttaaaaatagacaaagaatttcaatagccatttctgcaatatacaa-----gtagtcaataagcacatgaaaagatacttatcatcattaatcattagggaaatgcaaattaaaac------gagatacaaatttgcacatactatgatggctataatcaagaggacagacaatgacaagcattagtgaggataattggaacctttgtacaatgccagtggaaattttaaatcatgcagccacttttgaaagcaatgtgtcaggtcctt--aaaaaaagttaaatacaaagttatcatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcatatgtccacacaaaatcttgcagagaaatgtcacagcagcattattcataatagaccacaaatggaaacaatccagttgtccatcaactgatgaatggataaataaaatgtgtcacatccatacaatgaaatattattcagcaatgaaaagaaacaaaatgtaatacatgttttg-------------------ctttatgctaagcaaaagaggtcagaaacaaaaaggccacatattgtgtgaatccctttatatacaatgtagagtaggtaaatccataaagatagaaagtcaatcagtggttgccaggacctgagaggtatgggagaatggagagaattgctaaagagcatgagctttccattggaatgataaaaatgttct-TTTTTAAAAAAAAATAAatgtatgagatacatacaaatccaattttattacatgcatagattatgttgtagtgaagtcatggctttcagggtatccatcaccccaaaag i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9589251 1674 - 14377064 ccacctgttctccaaaaacctattcaaaataaaaaTAatcattgaaataaactaaaaaagaaataaatggaaggacattaatgtatggattgggagacttagtattgttacaatagcaatactccccagattgatctatagatttgatgcaattcctatgaaaggatcagctgctttttttctagaaattggcaaaataatcttaaaattcacatggatgcaacggatccaaaatagctaaaacaatctctaaaaggaaggacaaagttggaggattcccatttccaatttccaaacttaatacaaagtgtccataatcaatacagtatggcacttccataagaacggacatataggtcaatggaatggaattatgaatccaaaaatgcacccttccatttatggtgaattgattttcacaagggtaccaaagaagctcaatgagcaaaaatccatcttgaaaaaatgacactgagacaactggatataatgcacaagaatgaaacagggtccctatctc---acactatatataagtattaattttta-aaaaaggaacagagtattaaatatgagagttaaaactttaaaactcttttaagttaacatagtagtgaatctttgtggcattgaattagtcaatgattttctagttatgaaaccaaaagcaataaaaaatagataaaattacacttcatcaaagtatttttgcatttcaaaggacaacatcaagaaagtgaaaacacccacagaatgggagcattatttgcaaattgtatatctgataggggatttgtatccagaatatttaaagaattcttgtaattcaacaacaaaaagacaaacaacccaatttaaaaatagacaaagaatttcaatagccatttctgcaatatacaagtggtgtggtcaataagcacatgaaaagatatttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagacacaaatttgcacatactatgatggctataatcaaaaggacagacaatgacaagcattagtgaggataattggaacctttgtacaatgccagtggaaattttaaatcatgcagccacttttgaaagcaatgtgtcagctcctt--aaaaaaagttaaacacaaagttatcatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcatatgatcacacaaaatcttgcagagaaatgtcacagcagcattattcataatagaccacaaatggaaacaatccaatttcccatcaactgatgaatggataaataaaatgtgtcacatccatacaatgaaatattattcagcaatgaaaagaaatgaaatgtaatacatgttttg-------------------ctttatgctaagcaaaagaggacagaaacaaaaaggccacatattgtgtgaatccttttatatacaatgtagaataagtaaatccataaagatagaaagtcagtcagtggttgccaggacctgagaggtatgggagaatggagagaattgctaaagagcatgagctttccattggaatgataaaaatattctCTTTCTTAAAAAAAATAAATGTATGAGATGCAtacaagtccaattttattacatgcatagattatgttgtagtgaagtcaaggctttcagggtatccatcaccccaagag i cebCap1.NW_016107322v1 C 0 I 4 s aotNan1.NW_018487195v1 8725553 1667 + 9889416 ccacctgttccccaaaaacctatttgaaataaaaaTAatcattgaaataaactaaaaaagaaataaatggaagagcattaatgtatggattggaagacttagtattgttacaatagcaatactccacaaattgat-tatagatttgatgcaattcctatgaaagggtcagctgc-ttttttctagaaattggcaaaacattcttaaaattcacatggattcaagggatccaaagtagctaaaacaatctctaaaaggatggataaagttggaggattcccatttccaatttccaaacttaagacaaagtgcccataatcaatacagtatggcacttccgtaagaacagatatatagatcaatggaatggaattttgaatccaaaaatgcacccttccacttatggtgaattgattttcacaagggtaccaaagaagttcaataagcaaaaattcatctttaaaaaatgacactgagacaactgtatataatgcacaagaatgaaactgggtccctatctc---acactatatataagcattaattttta-aaaaaggaacagagtattaaatatgagagttaaaactttaaaactcttttaagttaacatagtagtaaatctttgtggccttgaattaggcaatggttttctagttatgaaaccaaaagcaataaaaaatagataaaattacacttcatcaaagtatttttgcatttcaaaggacaacatcaagaaagtgaaaacacccacagaatgggagcattatttgcaaattgtatatctgataggggatttgtatccagaatatttaaagaattcttgtaattcaacaacaaaaagacaaataacccaatttaaaaatagacaaagaatttcaatagccatttctgcaatatacaa-----gtggtcaataagcacatgaaaagatatttaacatcattaatcattagggaaatgcaaattaaaacaacaatgagatacaaatttgcacatactatgatggctataatcaaaaggacagacaatgacaagcattagtgaggataattggaatctttgtacaatgccagtggaaattttaaatcatgcagccacttttgaaagcaatgtgtcagctcctt--aaaaaaagttaaacacaaagttatcatttgatcaagcaatttcactcctaagtatataaccaagagaattaaaagcttatgtccacacaaaatcttgcagagaaatgtcacagcagcattattcataataggctgcaaatggaaacaatccagttgtccatcaactgatgaatggatagataaaatgtgtcacatccatacaatgaaatattattcagcaacgaaaagaaatgaaatgtaatacatgttttg-------------------ctttatgctaagcaaaagaggccagaaacaaaaaggccacatattgtgtgaatccttttatatacaatgtagagtaggtaaatccataaagatagaaagtcaatcagtggttgccaggacctgagaggtataggagaatggagagaattgctaaagagcatgagctttccactggaatgataaaaatgttctTTTTTTAAAAAAAAATAAatgtatgagatacatacaagtccaattttattacatgcatagattatgttgtagtgaagtcaaggcttttggggtatccataaccccaaaag i aotNan1.NW_018487195v1 C 0 I 4 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e saiBol1.JH378168 5004883 9780 + 13128814 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=99729.000000 s hg38.chr21_KI270874v1_alt 43063 20 + 166743 tgtacattgtatccattagg s panTro5.chr21 3667578 20 + 33445071 tgtacattgtatccattagg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17294493 20 + 46275980 tgtacattgtatccattagg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3233551 20 - 13858734 tgtacattgtatccattagg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4415761 20 + 32716333 tgtacattgtatccattagg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155370478 20 - 185818997 tgtacattgtttccataagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162193158 20 - 192294377 tgtacattgtttccataagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8671183 20 + 9440265 tgtacattgtttccataagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8402204 20 + 21915920 cgtacattgtttccataagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14978654 20 - 90373283 tgtacattgtatccataagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2146282 20 + 4234846 cgtacattgtttccataagg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 152942 20 - 13750039 tgtacattgtatccataagg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21906715 6 + 50472720 ------------ccttta-- i calJac3.chr21 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e aotNan1.NW_018487195v1 8727220 4 + 9889416 I e cebCap1.NW_016107322v1 9590925 4 - 14377064 I e saiBol1.JH378168 5004883 9780 + 13128814 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=53942.000000 s hg38.chr21_KI270874v1_alt 43083 6 + 166743 taattt s panTro5.chr21 3667598 6 + 33445071 taattt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17294513 6 + 46275980 taattt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3233571 6 - 13858734 taattt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4415781 6 + 32716333 taattt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155370498 6 - 185818997 taattt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162193178 6 - 192294377 taattt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8671203 6 + 9440265 taattt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8402224 6 + 21915920 taattt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14978674 6 - 90373283 taattt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2146302 6 + 4234846 taattt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 152962 6 - 13750039 taattt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21906721 4 + 50472720 --attt i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9590929 6 - 14377064 taattt i cebCap1.NW_016107322v1 I 4 C 0 s aotNan1.NW_018487195v1 8727224 6 + 9889416 taattt i aotNan1.NW_018487195v1 I 4 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e saiBol1.JH378168 5004883 9780 + 13128814 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=6055652.000000 s hg38.chr21_KI270874v1_alt 43089 616 + 166743 ctcatcatccacccttctctt-accctttcacccttccaaggcaccattgtctatcatcccccactctacgtccatgtatacacattatttaactcccacttataagtgagaacatgcaatatttgtctttcta-----tatctgacttgtttcacttaaggaaatgacctccagtcctatccatgttgctgcaaatgacgtaatttttttaatggatgagtagtattccattgtgtatatataccacattttttatccaatcatctgttgat-agacacatagattgattccatatctttgctattgtgaatagtgccacaataaacatacaagtgcaagtatctttttgatatcattacttattttctcttgagtatatacccagtattgcaattgctgaatccaatggtagctttgtatttagttctttgagaaatcttcatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatactcaccaacatcta---ttattttttgactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gatttct-tgctaattagcgaA s panTro5.chr21 3667604 613 + 33445071 ctcatcatccacccttctctt-accctttcacccttccaaggcaccattgtctatcatcccccactctacgtccatgtatacacattatttaactcccacttataagtgagaacatgcaatatttgtctttcta-----tatctgacttgtttcacttaaggaaatgacctccagtcctatccatgttgctgcaaatgacataatttttttaatggatgaatagtattccattgtgtacatataccacattttttatccaatcatctgttgat-agacacatagattgattccatatctttgctattgtgaatagtgccacaataaacatacaagtgcaagtatctttttgatatcattacttattttctcttgagtatatatccagtattgcaattgctgaatccaatggtagctttgtatttagttctttgagaaatcttcatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatactcaccaacatcta---ttattttttgactttttaatagtaaccattctgactagaataagatgatatcttgt---agctataattt-gatttct-tgctaattagtgaA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17294519 616 + 46275980 ctcatcatccacccttctctt-accctttcacccttccaaggcaccattgtctatcatcccccactctacgtccatgtatacacattatttaactcccacttataagtgagaacatgcaatatttgtctttcta-----tatctgacttgtttcacttaaggaaatgacctccagtcctatccatgttgctgcaaatgacataatttttttaatggatgaatagtattccattgtgtacatataccacattttttatccaatcatctgttgat-agacacatagattgattccatatctttgctattgtgaatagtgccacaataaacatacaaatgcaagtatctttttgatatcattacttattttctcttgagtatatatccagtattgcaattgctgaatccaatggtagctttgtatttagttctttgagaaatcttcatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatactcaccaacatcta---ttattttttgactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gatttct-tgctaattagtgaA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3233577 616 - 13858734 ctcatcatccacccttctctt-accctttcacccttccaaggcaccattgtctatcatcccccactctacgtccatgtgtacacattatttaactcccacttataagtgagaacatgcaatatttgtctttcta-----tatctgacttgtttcacttaaggaaatgacctccagtcctatccatgttgctgcaaatgacataatttttttaatggatgaatagtattccattgtgtatatataccacattttttatccaatcatctgttgat-agacacatagattgattccatatctttgttattgtgaatagtgccacaataaacatacaagtgcaagtatctttttgatatcattacttattttctcttgagtatatacccagtattgcagttgctgaatccaatggtagctttgtatttagttctctgagaaatcttcatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatactcaccaacatcta---ttattttttgactttttaatattaaccattctgactagaataagatgatatcttgctgtagctataattt-gatttct-tgctaattagtgaA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4415787 617 + 32716333 ctcatcatcaacccttctcttaaccctttcacccttccaaggcaccattgtctatcatcccacactctacgtccatgtgtacacattatttaactcccacttataagtgagaacattcaatatttgtctttcta-----tatctgacttgtttcacttaaggaaatgacctccagttctacccatgttgctgcaaatgacataatttttttaatggatgaatagtattccattgtgtatatatgccacattttttatccaatcatctgttgat-agacacatatgttgattccatatctttgctattgtgaatagtgccacaataaacatacaagtgtaagtatctttttgatatcattacttattttctcttgagtatacacacagtattgcaactgctgaatccaatggtagctttgtatttagttctttgagaaatcttcatac--tgttttctatagaagttgaacaaatttatattcccaccaacaacatataagagttcccttatctccacatcatcaccaacatcta---ttattttttgactttttaatagtaaccattctgactagaacaagatgatatcttgttgtagctataattt-gatttct-tgctaattagtgaA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155370504 615 - 185818997 ctcatcattcacccttctttt-accctttcacccttccagggcaccattatctatcatcccatactctacgtccatgtgtacacattatttaactcccacttataagtgagaacatgcaatatttgtctttctg-----tatctgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattcaattgtgtatatgtaccacattttttatccaatcatctgttgat-agacacatgggttgattccatatctttgctatcgtgaatagtgccacaataaatatacaagtgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagtagtacaattgctggatccaatggtagctttgtatttagttctctgagaaatctttatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatcctcagaaacatcta---ttatttttttactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gatttat-tgctaattagtgaA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162193184 616 - 192294377 ctcatcattcacccttctttt-accctttcacccttccagggcaccattatctatcatcccacactctacgtccatgtgtacacattatttaactcccacttataagtgagaacatgcaatatttgtctttctg-----tatctgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgataagacacatgggttgattccatatctttgctatcgtgaatagtgccacaataaatatacaagtgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagtagtacaattgctggatccaatggtagctttgtatttagttctctgagaaatctttatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatcctcagaaacatcta---ttatttttttactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gatttat-tgctaattagtgaA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8671209 615 + 9440265 ctcatcattcacccttctttt-accctttcacccttccagggcaccattatctatcatcccacactctacatccatgtgtacacattatttaactcccacttataagtgacaacatgcaatatttgtctttctg-----tatctgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgat-agacacatgggttgattccatatctttgctatcgtgaatagtgccacaataaatatacaagtgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagtagtacaattgctggatccaatggtagctttgtatttagttctctgagaaatctttatac--tgttttctatagatgttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatcctcagaaacatcta---ttatttttttactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gatttat-tgctaattagtgaA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8402230 615 + 21915920 ctcatcattcacccttctttt-accctttcacccttccagggcagcattatctatcatcccacactctacgtccatgtgtacacattatttaactcccacttataagtgagaacatgcaatatttgtctttctg-----tatctgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgat-agacacatgggttgattccatatctttgctatcgtgaatagtgccacaataaatttacaagtgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagtagtacaattgctggatccaatggtagctttgtatttagttctctgagaaatctttatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatcctcagaaacatcta---ttatttttttactttttaatagtaaccattctgactagaataaggtgatatcttgttgtagctataattt-gatttat-tgctaattagtgaA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14978680 615 - 90373283 ctcatcatccacccttctttt-accctttcacccttccaaggcaccattgtctatcatcccacactctacgtccatgtgtacacattatttaactcccacttataagtgagaacatgcaatatttgtctttctc-----tatctgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgat-agacacatgggttgattccatatctttgctattgtgaatagtgccacaataaatatccaagtgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagtagtataattgctggatccaatggtatctttgtatttagttctctgagaaatcttcatac--tattttctatagaggttgaactaatttatattcccaccaacaacatgtaagagttcccttatctccacatcctcaccaacatcta---ttatttttttactttttaatagtaaccattctgactagaataagatggtatcttgttgtagctataattt-gatttat-tgctaattagcaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2146308 615 + 4234846 ctcatcattcacccttctttt-accctttcacccttccagggcaccattatttatcatcccacactctacgtccatgtgtacacattatttaactcccacttataagtgagagcatgcaatatttgtctttctg-----tatccgacttgtttcacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgat-agacacatgggttgattccatatctttgctattgtgaataatgccacaataaatatacaagtgtaagtatctttttgatatcatgacttattttcttttgagtatataccaagtagtacaattgctggatccaatggtagctttgtatttagttctctgagaaatctttatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatcctcagaaacatcta---ttatttttttactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gatttat-tgctaattagtgaA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 152968 614 - 13750039 ctcatcatccacccttctttt-accctttcacccttccaaggcaccattgtctatcatcccacactctacgtccatgtgtacacattatttaactcccacttataagtgagaacatgcaatatttgtctttctg-----tatctgacttgttttacttaaggaaatgacctccagttctatccatgttgctgcaaatgacataa-ttttttaatggatgaatagtattccattgtgtatatgtaccacattttttatccaatcatctgttgat-agacacatgggttgagtccatgtctttgctattgtgaagagtgccacagtaaatatacaagtgtaagtatctttttgatatcatgacttattttcttttgagtatatatccagtagtgcaattgctggatccaatggtagctttgtatttacttctctgagaaatcttcatac--tgttttctatagaggttgaactaatttatattcccaccaacaacatataagagttcccttatctccacatcctcaccaacatcta---ttatttatttactttttaatagtaaccattctgactagaataagatgatatcttgttgtagctataattt-gattta--tgctaattagcaaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21906725 618 + 50472720 ctcatcatccacccctttcgt-accctttcacccttccaaggcataattgtctatcatcccatgctctgtgtccatgtgtacacattatttaactgccacttataagtaagaacatgcaatatttctctttcta-----catctgacttgtttcacttaaggaaacgacctccagttctatccatattgctgtaaaagatgc---ttttttaatgaatgaatagtatttcattatgtatatataccacatttttaatacaatcatctgttgat-agacacatgggttgattccatatctttgctattgtgaatagtgccacaataaacatacaagtacaagtatctttttgatatcatgacttattttcttctgagtgtttacccagtagtgtaatttttggatcctatggtagttttgtatttagttctttgagaaatcttcatac--tgttttctatagaggttgaactaattaatattcccaccaacagcatataagagttctcttatctccacatcctcaccaatatctattgttttttttttactttttaatagtaaccattctgactagaataagatggtatcttattgtggctataatttggatttctctgcttattagtgaA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5014663 607 + 13128814 ctaatCATCcacacctttctt-accctttcacccttccaaggcacaattgcctatcatcccatgctctttgtccatgtgtacacat--------tgccacttttaagtaagaacatgcaatatt--tctttcta-----tatctgacttgtttcacttaaggaaatgaccttcagttgtatccatattgctgtaaaagacac---tttttaaatggatgaatagtatttcattgtgtatatataccacatttttaatccaatcatctgttgat-agacacatgggttgattccatatctttgctattgtgaatagtgccacaataaatatacaagtgcaagtatctttttgatatcatgacttattttcttttgagtatatacccagtagtgtaaatgctggatccaatggtagttttgtatttagttctttgagaaatcttcatactgtgttttctatagaggttgaactaattaacattcccaccaacagcatataagagttctcttgtttccacattctcaccaacaccta---ttttttttttactttttaatagtaaccattctgactagaataagatgatatcttattgtggctataatttggatttctctgcttattagtgaA i saiBol1.JH378168 I 9780 C 0 s cebCap1.NW_016107322v1 9590935 620 - 14377064 ctcatcatccacccctttctt-accctttcacccttccaaggcacaattgtctatcatcccatggtctttgtccatgtgtacacattatttaactgccacgtataagtaagaacatgcaatatttctctttctatactgtatctgacttgtttcacttaaggaaatgaccttcagttgtatccatattgctataaaagacact--tttttaaatggatgaatagtatttca-tgtgtatatataccacatttttaatccaatcatctgttgat-agacacatgggttgattccatatctttgctattgtgaatagtgccacaataaacatacaagtgcaagtatctttttgatatcatgacctattttcttttgagtatatatccagtagtgtaactgctagatccaatgatagttttgtatttagttctttgagaaatcttcatac--tgttttctatagaggttgaactaattaatattcccaccaacagaatataagagttctgttatctccacatcctcaccaacatcta---ttgtttttttactttttaatagtaaccattctgactagaataagatgatatcttattgtggctataatttagatttctctgcttattagtgaA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8727230 612 + 9889416 ctcatcatccacccctttctt-actctttcacccttccaaggcacaattgtctatcatcctatgctctttgtccatgtgaacacattatttaactgccacttataagtaagaacacgcaatatttctctttcta-----tatctgacttatttcacttaaggaaatgacctccagttctatccatattgctgtaaaagacac---ttttttaacggatgaatagtatttcattgtgtatatataccacatttttaatccaatcatctgttgat-agacacatggcttgattccgtatctttgctattgtgaatagtgccacaataaacatacaagtgcaagtatctttttgatatcgtgacttattttcttttgagtatatacccagtagtgtaattgctggatccaatggtagttttgtatttagttctttgagaagtcttcatac--tgttttctatagaggttgaactaattaatattcccaccaacagcatataaaacttctcttatctccaaatcctcaccaacatcta------ttgttttactttttaatggtaaccattctgactagaacaagatgctaacttattgtggctataatttggatttctctgcttattagtgaA i aotNan1.NW_018487195v1 C 0 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20725742 2170 - 38779656 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=216551.000000 s hg38.chr21_KI270874v1_alt 43705 20 + 166743 gggatgataaaaatattcta s panTro5.chr21 3668217 20 + 33445071 gggatgataaaaatattcta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17295135 20 + 46275980 gggatgataaaaatattcta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3234193 20 - 13858734 gggatgataaaaatattcta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4416404 20 + 32716333 gggatgataaaaatattcta i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155371119 20 - 185818997 gggatgataaaaatattcta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162193800 20 - 192294377 gggatgataaaaatattcta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8671824 20 + 9440265 gggatgataaaaatattcta i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8402845 20 + 21915920 gggatgataaaaatattcta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14979295 20 - 90373283 gggatgataaaaatattcta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2146923 20 + 4234846 gggatgataaaaatattcta i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 153582 20 - 13750039 gggatgataaaaatattcta i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21907343 19 + 50472720 Agaatgat-aaaatattcca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5015270 19 + 13128814 gggatgat-aaaatattcta i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9591555 19 - 14377064 gggatgat-aaaatattcta i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8727842 19 + 9889416 gggatgat-aaaatattcta i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20727912 20 - 38779656 ggaatgatgaaaatattcta i otoGar3.GL873528 I 2170 C 0 e dasNov3.JH568778 3559907 5551 - 6883506 I e micMur3.chr31 19160773 5873 + 47401472 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=649623.000000 s hg38.chr21_KI270874v1_alt 43725 53 + 166743 aaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg s panTro5.chr21 3668237 53 + 33445071 aaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17295155 53 + 46275980 aaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3234213 53 - 13858734 aaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4416424 53 + 32716333 aaatgagatactggtgatgcttgaacaaccctgtgaatatacactgcaaaagg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155371139 53 - 185818997 aaattagatactgatgatgcttacacaaccctgtgaatatacactgcaaaagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162193820 53 - 192294377 aaattagatactgatgatgcttacacaaccctgtgaatatacactgcaaaagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8671844 53 + 9440265 aaattagatactgatgatgcttacacaaccctgtgaatatacactgcaaaagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8402865 53 + 21915920 aaattagatactgattatgcttgcacaaccctgtgaatatacactgcaaaagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14979315 53 - 90373283 aaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2146943 53 + 4234846 aaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaagg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 153602 53 - 13750039 aaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaatg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21907362 53 + 50472720 aaattagatactgatgatgcttgcacaatcctgtgaatatacactgaaaaaga i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5015289 53 + 13128814 aaattagatactgatgatgcttgcacaatcctgtgaatatacactgcaaaaaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9591574 53 - 14377064 aaattagatactgatgatgcttgcacaatcctgcgaatatacactgaaaaaga i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8727861 53 + 9889416 aaattagatactgatgatgcttgcacaaccctgtgaatatacactgcaaaaga i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20727932 53 - 38779656 aaattagatgatgatgctggttgcagaactctgtgaacatttgctttgaatga i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3565458 53 - 6883506 aaattaaatacttgtgatggatgcacaaccctgtgaatatacactttatatga i dasNov3.JH568778 I 5551 C 0 e micMur3.chr31 19160773 5873 + 47401472 I e canFam3.chr31 13788374 5522 + 39895921 I e mm10.chr16 78093388 3140 + 98207768 I a score=1136767.000000 s hg38.chr21_KI270874v1_alt 43778 117 + 166743 gtgaattttatg---tgtgaattatatctcaat-----aa---aATATAAAACAATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCCCC---CCCCAA-AAAAAA----ACCCAGA-TCAATGGCTAGAAGGC s panTro5.chr21 3668290 118 + 33445071 gtgaattttatg---tgtgaattatatctcaat-----aa---aATATAAAACAATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCCCC---CCAAAA-AAAAAA---TACCCAGA-TCAATGGCTAGAAGGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17295208 119 + 46275980 gtgaattttatg---tgtgaattatatctcaat-----aa---aATATAAAACAATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCCCC---CCCAAA-AAAAAA--ATACCCAGA-TCAATGGCTAGAAGGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3234266 117 - 13858734 gtgaattttatg---tgtgaattatatctcaat-----aa---aATATAAAACAATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCCCC---CCCCAA-AAAAAT----ACCCAGA-TCAATGGTTAGAAGGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4416477 117 + 32716333 gtgaattt--tg---tgtgaattatatctcaat-----aa---aATATAAAACAATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCACC---CCCCCA-AAAAAA--TTACCCAGA-TCAATGGCTAGAAGGC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155371192 117 - 185818997 gtgaattttatg---tgtgaattatatctcaat-----aa---CATATAA---AATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCACCCCTCCCCCA-AAAAAT----ACCCAGA-TCAATGGCTAGAAGGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162193873 117 - 192294377 gtgaattttatg---tgtgaattatatctcaat-----aa---CATATAA---AATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCACCCCTCCCCCC-AAAAAT----ACCCAGA-TCAATGGCTAGAAGGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8671897 117 + 9440265 gtgaattttatg---tgtgaattatatctcaat-----aa---CATATAA---AATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCACCCCTCCCCCC-AAAAAT----ACCCAGA-TCAATGGCTAGAAGGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8402918 117 + 21915920 gtgaattttatg---tgtgaattatatctcaat-----aa---aATATAA---AATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCACCCCTCCCCCC-AAAAAT----ACCCAGA-TCAATGGCTAGAAGGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14979368 117 - 90373283 gtgaattttatg---tgtgaattatatctcaat-----aa---aATATAA---AATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCACCCCTCCCCCA-AAAATT----ACCCAGA-TCATTAGCTAGAAGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2146996 117 + 4234846 gtgaattttatg---tgtgaattatatctcaat-----aa---aATATAA---AATA-TTTTAA----TTAATAAATAA-AATACATCTGTTTACCACCCCTCCCCAA-AAAAAT----ACCCAGA-TCAATGGCTAGAAGGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 153655 110 - 13750039 gtgaattttata---tgtgaattatatctcaat-----aa---aATCTAA---AATA-TTTTAA----TTAATAAATGA-AATA--------TACCACCCCTCCCCCCAAAAAAT----ACCCAGA-GCAATGGCTAGAAGGC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21907415 117 + 50472720 gtgaattttatg---cgtgaagtatatctcaat-----aa---aATAGaaaataata-ttttaa----ttaataaatGA-AATACCTCTGTATAC-------CCCCAA-AGAAGCAAATACCCAGA-TCAATGGCTAGAAGGC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5015342 116 + 13128814 gtgaattttata---tgtgaattatatctcaat-----aa---aatataaaacaata-ttttaa----ttaataaatGA-AATACCTCTGTATA--------CCCCAA-AGAAACAAATACCCAGA-TCAATGGCTAGAAGGC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9591627 116 - 14377064 gtgaattttatg---tgtgaattatatctcaat-----aa---aATATAAAACAATA-TGTTAA----TTAATAAATGA-AATACCTCTGTATA--------CCCCAA-AGAAACAAATACCCAGA-TCAATGGTTAGAAGGC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8727914 116 + 9889416 gtgaattttatg---tgtgaattatatctcaat-----aa---aATAGAAAACAATA-TTTTAA----TTAATAAATGA-AATACCTCTGTATA--------CCCCAA-AGAAACAAATACCCAGC-TCAATCGCTAGAAGGC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20727985 115 - 38779656 gtgggttttata---tttgaattatatctcaataaaAGAA---AATATAAAGCAACGTTTTTAA----CATATAAATAA-AAGACAGCTGGAT---------TCTCAA-AAAAAA------CAAAG-TCATCAAGTAGAAAGC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13793896 114 + 39895921 GTGGATTTTACA---TGTGAATTATATCTCAAC-----AA---AATAT-----TATG-TTTTAAGTTTTTAATAAATAA-AAGACAGCTAGA----------TTTCCA-AAAAATAAATGCCCAAAGTCATCAGTTAAAAGGC i canFam3.chr31 I 5522 C 0 s dasNov3.JH568778 3565511 116 - 6883506 gtgaattttatgatatatgaactatatcacaat-----agttttattaaa---aaTA-TTT-------TTAGCAAATAATAAGGCAGCTGAAT---------TCTCAA-AAAAAT-AATGTCCAGAGTCATTAGCTAGAAGAC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19160773 5873 + 47401472 I e mm10.chr16 78093388 3140 + 98207768 I a score=1445829.000000 s hg38.chr21_KI270874v1_alt 43895 116 + 166743 AAAGAAGCTAGAAAATACACTATTC---CTATTCTA-----AA-----GC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGACA--AAGATCAACAAAAAGATGTGTTCCATTCCA s panTro5.chr21 3668408 116 + 33445071 AAAGAAGCTAGAAAATACGCTATTC---CTATTCTA-----AA-----GC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGACA--AAGATCAACAAAAAGATGTGTTCCATTCCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17295327 116 + 46275980 AAAGAAGCTAGAAAATACGCTATTC---CTATTCTA-----AA-----GC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGACA--AAGATCAACAAAAAGATGTGTTCCATTCCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3234383 116 - 13858734 AAAGAAGCTAGAAAATACACTATTC---CTATTCTA-----AG-----GC-----TGATAGTCA-TTTTATCATGTTGTAGATATCTCTAAGTAAGAAGTTGACA--AAGATCAACAAAAAGATGTGTTCCATTCCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4416594 117 + 32716333 AAAGAAGCTAAAAAATACACTATTC---CTATTCTA-----AG-----GC-----TGATAATTATTTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGACA--AAGATCAACAAAAAGATGTGTTCCATTCCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155371309 116 - 185818997 AAAGAAGCTAGAAAATACACTATTC---CTATTCTA-----AG-----AC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTGAGTAAGAAGTTAAAA--AAGATCAACAAAAATATGTGTTCCATTCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162193990 116 - 192294377 AAAGAAGCTAGAAAATACACTATTC---CTATTCTA-----AG-----AC-----TGATATTCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAATATGTGTTCCATTCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8672014 116 + 9440265 AAAGAAGCTAGAAAATACACTATTC---CTATTCTA-----AG-----AC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAATATGTGTTCCATTCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8403035 116 + 21915920 AAAGAAGCTAGAAAATACACTATTC---CTATTCTA-----AG-----AC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAAGATGTGTTCCATTCCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14979485 116 - 90373283 AAAGAAGCTAGAAAATACACTATTC---CTATTCTA-----AG-----GC-----TGATAATCA-TTGTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAAGATGTGCTCCATTCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2147113 116 + 4234846 AAAGAAGCTAGAAAATACACTATTC---CTATTCTA-----AG-----AC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAAAAGTTGAAA--AAGATCAACAAAAAGATGTGTTCCATTCCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 153765 116 - 13750039 AAAGAAGCTAGAAAATACACTATTC---CTGTCCTA-----AG-----GC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAAGATGTGTTCCATTCCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21907532 115 + 50472720 AAGGGAGCTAGAAAATATACGATTC---CTATTCTA-----AG-----GC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AA-ATCAACAAAAAGATATATTCCATTCCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5015458 116 + 13128814 AAAGAAGCTAGAAAATACACTATTC---CTATTTTT-----AG-----GC-----TGACAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAGCAGAATGATATATTCCATTCCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9591743 116 - 14377064 AAAGGAGCTAGAAAATACACTATTC---CTATTCTA-----AG-----GC-----TGATAATCA-TTTTACCATGTTATAGATATCGCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAAGATGTATTCCATTCCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8728030 116 + 9889416 AAAGGAGCTAGAAAATACATTATTC---CTATTCTA-----AG-----GC-----TGATAATCA-TTTTACCATGTTGTAGATATCTCTAAGTAAGAAGTTGAAA--AAGATCAACAAAAAGATGTATTCCATTCCA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20728100 107 - 38779656 AAAGTCGGTGGAAAATACACTGTTCTGTCTAAGCCC-----AG-----TT-----TAGTAACCA-GTTTACTTTGT-----------CTAAGCGGGAAATTGGAA--AAGATCCATGACAAGATGTA-TCCACTCCT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78096528 113 + 98207768 aaaGAAACTAG-AAATGCACTTTCC---ATGGCACAACTACAG-----CT-----TAACAACTA-TTTTACTATGTTCTAGCTATTTTCAAGT-ATATGTTGG-----AGAGCAACAATAAGATGTA---CATTCTA i mm10.chr16 I 3140 I 555 s canFam3.chr31 13794010 123 + 39895921 AAAGCATCTGAGAAATACAATATTT---TTATTCTA-----AGCCCACTC-----TAATAATCA-CTTTACTATGCTGTAGCCATCTCCAAATAGTAAATTGGGGATAAAATCACTAATAAGATGTACTCCATCCCT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3565627 121 - 6883506 ACAGAAGCAGGGAAGTGCATTGTTC---TTATTCTA-----AT-----CCCACTTTAATAATCA-TTTTACTATGCTATAACCATCTCTAAGCTGTAAATTGGAA--AAGATCTCCAATAAAATGTATTCCATATCA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19160773 5873 + 47401472 I a score=829022.000000 s hg38.chr21_KI270874v1_alt 44011 76 + 166743 AAAATTTCTCGATTCTATGATTCAGCGCAGAAAGATTGTGCAAGTT--TATACTTTAGTAATACAGAACAAAGTGAGT s panTro5.chr21 3668524 76 + 33445071 AAAATTTCTCGATTCTATGATTCAGCGCAGAAAGATTGTGCAAGTT--TATACTTCAGTAATACAGAACAAAGTGGGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17295443 76 + 46275980 AAAATTTCTCGATTCTATGATTCAGCGCAGAAAGATTGTGCAAGTT--TATACTTCAGTAATACAGAACAAAGTGGGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3234499 76 - 13858734 AAACTTTCTCGATTCTATGATTTAGCGCAGAAAGATTGTGCAAGTT--TATACTTTAGTAATACAGAACAAAGTGGGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4416711 76 + 32716333 AAAATTTCTCGATTCTATAAATTAGTGCAGAAAAATTGTTCAAGTT--CATACTTTAGTAACACAGAACAAAGTGGGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155371425 75 - 185818997 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTT--TATACTTTAGTAATAT-GAACAAAGTTGGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162194106 75 - 192294377 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTT--TATACTTTAGTAATAT-GAACAAAGTTGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8672130 75 + 9440265 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTT--TATACTTTAGTAATAT-GAACAAAGTTGGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8403151 75 + 21915920 AAAAGTTCTTGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTT--TATACTTTAGTAATAT-GAACAAAGTTGGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14979601 75 - 90373283 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTT--TATACTTTAGTAAGAT-GAACAAAGTGGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2147229 75 + 4234846 AAAAGTTCTCGATTCTATAATTTAGTGCAGAAAGATTGTGCAAGTT--TATACTTCAGTAATAT-GAACAAAGTTGGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 153881 77 - 13750039 AAAAGTTCTCAATTCTATAATTTAGTGCAGGAAGATTGTGCAAGTTTATATACTTTAGTAATAT-GAACAAAGTGGGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21907647 76 + 50472720 AACATTCCTCAATTCTATGATTTAGTGCAGAAAGACTGTGCAGGTT--TATACCTTAGTAATACAGAACAAAGTTGGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5015574 76 + 13128814 AAAATTCCTCAGTTCTATGATCTAGTGCAGAAAGACTGTGCAGGTT--TATATCTTAGTAATACAGAACAAAGTGAGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9591859 76 - 14377064 AAAATTCCTCAGATCTATGATTTAGTGCAGAAAGACTGTGCAGGTT--CATATCTTAGTAATACAGAACAAAGTGGGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8728146 76 + 9889416 AAAATTCCTCAGTTCTATGATTTAGTGCAGAAAGACTGTGCAGGTT--TATAACTTAGTAATACAGAACAAAGTGGGT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20728207 75 - 38779656 AAAAGTCCTCACTTCTATGATTTAGTGAAGAAAGATTATGTGTGGT--TATACATTATCAACAGAGGACAAC-TGGGT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13794133 76 + 39895921 AAAATTCCTCAGGTCTATGGTTTAGTGCAGAGAGGCTGTATAGGTT--TATACCCTACTAATTCAGAACAAATTGGGT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3565748 68 - 6883506 AAAATGCCTCATTTCTATAACTT----CAAAAAGATGGT---AGGT--CATA-TTTATTATCAAAGAATAAACTGGGT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19160773 5873 + 47401472 I e mm10.chr16 78096641 555 + 98207768 I a score=40919.000000 s hg38.chr21_KI270874v1_alt 44087 3 + 166743 ACT s panTro5.chr21 3668600 3 + 33445071 ACT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17295519 3 + 46275980 ACT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3234575 3 - 13858734 ACT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4416787 3 + 32716333 ACT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155371500 3 - 185818997 ACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162194181 3 - 192294377 ACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8672205 3 + 9440265 ACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8403226 3 + 21915920 ACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14979676 3 - 90373283 ACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2147304 3 + 4234846 ACT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 153958 3 - 13750039 ACT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21907723 3 + 50472720 ACT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5015650 3 + 13128814 ACT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9591935 3 - 14377064 ACT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8728222 3 + 9889416 ACT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20728282 3 - 38779656 ATT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13794209 3 + 39895921 ACT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e mm10.chr16 78096641 555 + 98207768 I a score=85804.000000 s hg38.chr21_KI270874v1_alt 44090 11 + 166743 GGtgatagcag s panTro5.chr21 3668603 11 + 33445071 GGtgatagcag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17295522 11 + 46275980 GGtgatagcag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3234578 11 - 13858734 GGtggtagcag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4416790 11 + 32716333 GGtgatagcgg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155371503 11 - 185818997 GGtgatagagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162194184 11 - 192294377 GGtgatagagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8672208 11 + 9440265 GGtgatagagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8403229 11 + 21915920 GGtgatagagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14979679 11 - 90373283 GGtgatagagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2147307 11 + 4234846 GGtgatagagg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 153961 11 - 13750039 GGtgatagagg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21907726 11 + 50472720 TGAgatagcag i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5015653 11 + 13128814 TGtgatggcag i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9591938 11 - 14377064 TGCgatggcag i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8728225 11 + 9889416 TGtgatagcag i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13794212 11 + 39895921 AGAAAGAACAG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e mm10.chr16 78096641 555 + 98207768 I a score=5328144.000000 s hg38.chr21_KI270874v1_alt 44101 559 + 166743 cagaaggcagacacatttctaggcagacaggggtgagtccccagtaaaactagaccttcaaaccaagcacagcttaaagcctgaaaactgagttaccagcgtccacaaccagagtgagaacttcctcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactcccccattctgatcccataaaaaccctggactcagccacatattggg---actacatgctttcaggtaggggctacccacttcaggtcccctcttgtgtcaagagctgttctgttgt-ctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacccaccaaatggcaggtgcaaaaaatgctgtaaca-ctgtagccctccaaccctctgctggcaccaggctgttgcttcatgtaacaggaagcagtggcaatggggccaggccagccaagaagctatgagctggaatgtgggcagcaggactgaacaagctgtaaaacaaatgagctgaa s panTro5.chr21 3668614 560 + 33445071 cagaaggcagacacatttctaggcagacaggggtgagtccccagtaaaactagaccttcaaaccaagcacagcttaaagcctgaaaactgagttaccagcgtccacaaccagagtgagaacttcctcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactcccccattctgatcccataaaaaccctggactcagccacatattggg---actacatgctttcaggtaggggctacccacttcaggtcccctcttgtgtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacccaccaaatggcaggtgcaaaaaatgctgtaaca-ctgtagccctccaaccctccgctggcaccaggctgttgctccatgtaacaggaagcagtggcaatggggccaggccaaccaagaagctatgagctggaatgtgggcagcaggactgaacaagctgtaaaacaaatgagctgaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17295533 560 + 46275980 cagaaggcagacacatttctaggcagacaggggtgagtccccagtaaaactagaccttcaaaccaagcacagcttaaagcctgaaaactgagttaccagcgtccacaaccagagtgagaacttcctcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactcccccattctgatcccataaaaaccctggactcagccacatattggg---actacatgctttcaggtaggggctacccacttcaggtcccctcttgtgtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacccaccaaatggcaggtgcaaaaaatgctgtaaca-ctgtagccctccaaccctccgctggcaccaggctgttgctccatgtaacaggaagcagtggcaatggggccaggccaaccaagaagctatgagctggaatgtgggcagcaggactgaacaagctgtaaaacaaatgagctgaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3234589 560 - 13858734 cagaagacagacacatttctaggcagacaggggtgagtccccagtaaaactagaccttcaaaccaagcacagcttaaagcctgaaaactgagttaccagagtccacaaccagagtgagaacttcctcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactcccccattctgatcccataaaaaccctggactcagccacatattggg---actacatgctttcaagtaggggctacccacttcaggtcccctcttgtgtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctccttcttcttggacatgggacaagaaccccgtacccaccaaatggcaggtgcaaaaaatgctgtaaca-ctgtagccctccaaccctctgctggcaccaggcagttgctccatgtaacaggaagcagtggcagtggggccaggccagccaagaagctatgagctggaatgtgggcagcaggactgaacaagctgtaaaacaaatgagctgaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4416801 558 + 32716333 aagaaggcagacacatttctaggcagat--gggtgagtccccagtaaaactggaccttcaaaccaagcacagcttaaagcctgaaaattgggctgccagagtccacaaccagagtgagaacttcctcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatgagcacatacttccccgttctgatcccataaaaatcctggactcagccacatattggg---actacatgctttcaggtaggggctaccaacttcaggtcccctctcatgtcaagagctgttctgttgttctcttgtctgccttgcttattctccagttgtccatgtaacctcattcttcttggacacgggacaagaacccagtactcgccaaatggtgggtgcaaaaaatgctgtaaca-ctgtagccctcccacactctgctggcaccaggcagttgctccatgtaacaggaagcagtggcagtggggccaggccagccaagaagctatgagacggactgtgggcagcaggactgaacaagctgtgaaacaaatgagctgaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155371514 562 - 185818997 caggaggcagacacatttctaggcagataggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctggcagaatccacaaccagagtgagaacttcctcag----tgccttttagcgaatttaatggtgctttgtctaggcccacttatggaccaatcagcacacactctcccattctgatcccatataaaccctggactcagccacatattgggactactacatgctttcaggtacacgctaaccacttcaggtcccctctcgtgtcaagagctgttctgttgttctcttctctgccttgcttattctctagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaaatgctgtaaca-ctgtaaccctcccaccctccgctggtgccaggcagctgctccacataacagaaagcagtagcagtggggccaggtcagcccagaagctacgagctggagtg-gagcagcaggactgaacaagctgtaaaacaaatgagctgaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162194195 562 - 192294377 caggaggcagacacatttctaggcagataggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctggcagaatccacaaccagagtgagaacttcctcag----tgccttttagcgaatttaatggtgctttgtctaggcccacttatggaccaatcagcacacactctcccattctgatcccatataaaccctggactcagccacatattgggactactacatgctttcaggtagacgctaactacttcaggtcccctctcatgtcaagagctgttctgttgttctcttctctgccttgcttattctctagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaaatgctgtaaca-ctgtaaccctcccaccctccgctggtgccaggcagctgctccacataacagaaagcagtagcagtggggccaggtcagcccagaagctacgagctggagtg-gagcagcaggactgaacaagctgtaaaacaaatgagctgaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8672219 562 + 9440265 caggaggcagacacatttctaggcagataggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctggcagaatccacaaccagagtgagaacttcctcag----tgccttttagcgaatttaatggtgctttgtctaggcccacttatggaccaatcagcacacactctcccattctgatcccatataaaccctggactcagccacatattgggactactacatgctttcaggtagacgctaaccacttcaggtcccctctcgtgtcaagagctgttctgttgttctcttctctgccttgcttattctctagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaaatgctgtaaca-ctgtaaccctcccaccctccgctggtgccaggcagctgctccacataacagaaagcagtagcagtggggccaggtcagcccagaagctacgagctggagtg-gagcagcaggactgaacaagctgtaaaacaaatgagctgaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8403240 557 + 21915920 caggaggcagacacatttctaggcagataggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctgccagaatccacaaccagagtgagaacttcctcag----tgccttttagcgaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactctcccattctgatcccatataaaccctggactcagccacatattggg---actacatgctttcaggtagacgctaaccacttcaggtcccctctcgtgtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaaatgctg-aaca-ctgtaagcctcctaccctccgctggtgccaggcagctgctccacataacagaaagcagtagcagtggggccaggtcag-ccagaagctacgagctggagtg-gggcagcaggactgaacaagctgtaaaacaaatgagctgaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14979690 559 - 90373283 caggaggcagacacatttctaggcagacaggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctgccagaatccacaaccagagtgagaacttcttcag----tgccttttagccaatttaatggtgctttgtccaggcccacttatggaccaatcaacacacactctcccattctgatcccatataaaccctggactcagccacatattggg---actacatgctttcaggtagaggctaaccacttaaggtcccatctcgggtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaaatgctgtaaca-ctgcaaccctcccaccctctgctggtgccaggcagctgctccacgtaacaggaagcagtagcagtggggccaggtcagcccagaagttactagctggagcg-gggcagcaggactgaacaagctgtaaaacaaatgagctgaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2147318 562 + 4234846 caggaagcagacacatttctaggcagataggggtgggtccccagtaaaactgaaccttcaaaccaagcacaggttaaagcctgaaaacggagctgccagaatccacaaccagactgagaacttcctcag----tgccttttagcgaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactctcccattctgatcccatataaaccctggactcagccacatattgggactactacatgctttcaggtagacgctaaccacttcaggtcccctctcgtgtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcctggacatgggacaagaacccagtacctgccaaatggcaggtacaaaaagtgctgtaaca-ctctaaccctcccaccctccgctggtgccaggcagctgctccacataacagaaagcagtagcagtggggccaggtcagcccagaagctacgagctggagtg-gggcagcaggactgaacaagctgtaaaacaaatgagctgaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 153972 559 - 13750039 caggaggcagacacatttctaggcagaaaggggtgggtccccagtataactgaaccttcaaaccaagcacaggttaaagcctgaaaactgagctgccagaatccacaaccagagtgagaacttcctcag----tgcctttaagccaatttaatggtgctttgtccaggcccacttatggaccaatcagcacacactctcccattctaatcccatataaaccctggactcagccacatattggg---actacatgctttcaggtagaggctaaccacttcaggtcccctctcgtgtcaagagctgttctgttgttctcttctctgccttgcttattctccagttgtccatgtaacctcattcttcttggacatgggacaagaacccagtaccttccaaatggcaggtacaaaaaatgctgtaaca-ctgtaaccctcccaccctctgctggtgccaggcagctgcttcacgtaacaggaagcagtagcagtggggccaggtcagcccagaagttactagctggagcg-gggcagcaggactgaacaagctgtaaaacaaatgagatgaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21907737 562 + 50472720 cagaaggcagacaaatttctaggcagacaggggtatggccccagtaaaactggatcttcaaacaaaacacagcttaaagcctgaaaactgagctgccagagtccacaacaagagtgcgaacttcctcaatggctggcttttagccaatttaatgg--ttttttccaggtccatttatggacagatcagcacacagtcccccattctgatcccataaaaaccctggactcagccacacatcagg---actacacacattcaggtaggagctatctactttaggtcccctcttgtgtcaagagctgttctgttgttctcttctctgccttgctcattctccagttgtccatgtaacctcattctttttggatttgggacaagagcccagtacccaccaaagggcaggtgcaaaaggagctgtaatacctgtagccctcccaccctctgctggtgccaggcagctgctccgtgtaacaggaagcagaggcagcaaggcaaggccagcccaggagctgtgagctggagtg-gggcaggaggactgaatgagctgtaacacaaatgagctgaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5015664 553 + 13128814 cagacggcagacaaatttctaggcagacaggggtgtggccccagtaaaactggatcttcaaacaaaacacagcttaaagcctgaaaactgagctgccagagtccacaacaggagtgagaacttcctcaatggctggcttttagccaatttaatggt-ttttttccaggtccatttatagacagatcagcacacagtcccccattctaatcccataaaaaccctggactcagccacgcatcggg---actacacacattcaggtaggagctacctactttaggtccccacttgtgtcaggagctgttctg--------ttctctgccttgttcattctccagttgtccatgtaacctcattctttctggatgtgggacaagagcccagtacccaccaaagggcaggtgcaaaaggaactttaatacctgtagccctcccaccctctgctggtgacaggcagctgctgcatgtaacaggaagcagaggcagtgaggcaaggccagcccaggagctgtgcgctggagtg-gggcagaagtgccgaa--agctgtaacacaaatgagctgaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9591949 561 - 14377064 cagaaggcagacaaatttctaggcagat--gggtgtggccccagtaaaactggatcttcaaacaaaacacagcgtaaagcctgaaaactgagctgccagagtccacaccaagagtgagaacttcctcaatggctggcttttagccaatttaatggt-ttttttccaggtccatttatggacagatcagcacacagtcgcccattctgatcccataaaaaccctggactcagccacacatcggg---actacacacatttaggtaggatccacctactttaggtcccctcttgtgtcaagagctgttctattattctcttctctgccttgctcattctccagttgtccatgtaacctcattctttttggatgtgggacaagggcccagtacccaccaaagggcaggtgcaaaaggaactgtaacacctgtagccctcccaccctctgctggtgccaggcagctgctccatgcaacaggaaacagaggcagtgaggcaaagccagcccaggagctgtgagctggagtg-gggcagaaggactgaatgagctgtaacacaaatgagctgaa i cebCap1.NW_016107322v1 C 0 I 243 s aotNan1.NW_018487195v1 8728236 563 + 9889416 cagaaggcagacaaatttctaggcagacaggggtgtggctccagtaaaactggatcttcaaacaaaacacagcttaaagcctgaaaactgagctgccagagtccacaacaagagtgagaacttcctcaatggctggcttttagccaatttaatggt-ttttttccaggtccatttatggacagatcagcacacagttccccattctgatcccataaaaaccctgcactcagccacacatcggg---actacacagtttctggtaggagctacctactttaggtcccctcttgtgtcaagagctgttctgttgttctcttctctgccttgctcactctccagttgtccatgtaacctcattctttttggatgtgggacaagagcccagtacccaccaaagggcaggtgcaaaagaaactgtcatacctgtagccctcccaccctctgctggtgccaggcagctgctccatgtaacaggaagcagaggcagtgaggcaaggccagcccaggagctgtgagctggagtg-gggcagaaggactgaatgagctgtaacacaaatgagctgaa i aotNan1.NW_018487195v1 C 0 I 93 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=533319.000000 s hg38.chr21_KI270874v1_alt 44660 82 + 166743 ----------acttgctgccctcccacccccattcactgtgctgcaggcagtggaaagaagagagagatgtatcactccttgagggctcaga s panTro5.chr21 3669174 82 + 33445071 ----------acttgctgccctcccaccccctttcactgtgctgcaggcagtggaaagaagagagagatgtatcactccttgagggttcaga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17296093 82 + 46275980 ----------acttgctgccctcccaccccctttcactgtgctgcaggcagtggaaagaagagagagatgtatcactccttgagggttcaga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3235149 82 - 13858734 ----------acttgctgccctcccacctccattcactgtgctgcaggcagtggaaagaagagagagatgtatcactccttgagggctcaga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4417359 82 + 32716333 ----------acttgctgccctcccacccccattcactgtactgcaggcagtggaaagaagagagagatgtatcactccttgagggctcaga i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155372076 82 - 185818997 ----------acttgctgccctcccacccccattcactgtgccacaggcagtggacaggagacagagacataacactccttgagggctcaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162194757 82 - 192294377 ----------acttgctgccctcccacccccattcactgtgccacaggcagtggacaggagacagagacgtaacactccttgagggctcaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8672781 82 + 9440265 ----------acttgctgccctcccacccccattcactgtgccacaggcagtggacaggagacagagacgtaacactccttgagggctcaga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8403797 82 + 21915920 ----------acttgctgccctcccacccccattcactgtgccacaggcagtggacaggagacagagacgtaacactccttgagggctcaga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14980249 82 - 90373283 ----------acttgctgccctcccacccccattcactgtgctgcaggcagcagataggagacagagatgtaacactccttgagggctcaga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2147880 82 + 4234846 ----------acttgctgccctcccacccccattcactgtgccacaggtagtggacaggagacagagacgtaacactccttgagggctcaga i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 154531 82 - 13750039 ----------acttgttgccctcccacccccattcattgtgctgcaggcagtggacaggagacagagatgtaacactctttgagggctcaga i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21908299 89 + 50472720 tcacactgtccccaccagtcccgcaacccatcttcactgtagtgcaggcagtgg---ggagagagagccgtaacagtcctttggggctcaga i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5016217 88 + 13128814 tta-gccgtccccaccagtcccctaacccctgttcactgtagtgcaggcagtgg---ggggagagagctgtaacagtcctttggggcccaga i saiBol1.JH378168 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e aotNan1.NW_018487195v1 8728799 93 + 9889416 I e cebCap1.NW_016107322v1 9592510 243 - 14377064 I e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=1358435.000000 s hg38.chr21_KI270874v1_alt 44742 236 + 166743 cctcaggactccccaagcaa----ctgtaacacccctt-gggctccacagttgctggcatctctgagttttcagaagccactgcagcctccttgtccagacactggcacccaagcagaaatgattcaagacagcacacccggaccagtcatggactgagcacagagttggcaggcactggatccaggcccatagcacaagctgagtgcaatcactgggctgagtgagaggagtaagcctag s panTro5.chr21 3669256 240 + 33445071 actcaggactccccaagcaaaagactgtaacacccctt-gggctccacagttgctggcatctctgagttttcagaagccactgcagcctccttgtccagacactggcacccaagcaaaaatgattcaagacagcacacccggaccagtcatggactgagcacagagttggcaggcactggatccaggcccatagcacaagctgagtgcaaccactgggctgagtgacaggcgtaagcctag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17296175 240 + 46275980 actcaggactccccaagcaaaagactgtaacacccctt-gggctccacagttgctggcatctctgagttttcagaagccactgcagcctccttgtccagacactggcacccaagcagaaatgattcaagacagcacacccggaccagtcatggactgagcacagagttggcaggcactggatccaggcccatagcacaagctgagtgcaaccactgggctgagtgacaggcgtaagcctag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3235231 240 - 13858734 cctcaggactccccaagcaaaagactgtaacacccctt-gggctccacagttgctggcatctctgagttttcaggagccactgcagcctccttgtccagacactggcacccaagcagaaatgattcaagacagcacacccggaccagtcatggactgagcacagtgttggcaggcactggatccaggcccatagcacaagctgagcgcaaccactgggctgagtgagaggagtaagcctag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4417441 236 + 32716333 cctcaggactccccaaccaa-agactgtaacacccctt-gggctccacagttgctggcatttctgagttttcaggagccactgcagcctctttgtccagacactggcactcaagcagaaatgattcaaga---cacacccggaccagtcatggactgagtgcagagtcggcaggcactggatccaggcccatagcacaagctgagcgcaaccactgggctgagtgagaggagtgagcctag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155372158 239 - 185818997 cctcaggactccccaagcaa--gactgtaacaccccctggggctccacagttgctggcatctctgagttttcaggagccactgaagcccccttgtccagacactggcacccaagcagaagtgattcaagacagcacacctggaccagtcatggactgagcacagagctggcaggcaccagatccaggtccatagcacaagctgagtgcaactgctgggctgaatgagaggagtgagcctag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162194839 239 - 192294377 cctcaggactccccaagcaa--gactgtaacaccccctggggctccacagttgctggcatctctgagttttcaggagccactgcagcccccttgtccagacactggcacccaagcagaagtgagtcaagacagcacacctggaccagtcatggactgagcacagagctggcaggcaccggatccaggtccatagcacaagctgagtgcaactgctgggctgaatgagaggagtgagcctag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8672863 239 + 9440265 cctcaggactccccaagcaa--gactgtaacaccccctggggctccacagttgctggcatctctgagttttcaggagccactgcagcccccttgtccagacactggcacccaagcagaagtgattcaagacagcacacctggaccagtcatggactgagcacagagctggcaggcaccggatccaggtccatagcacaagctgagtgcaactgctgggctgaatgagaggagtgagcctag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8403879 239 + 21915920 cctcaggactccccaagcaa--gactgtaacaccccctggggctccacagttgctggcatttctgagttttcaggagccactgcagcccccttgtccagacactggcacccaagcagaagtaattcaagacagcacacctggaccagtcatggactgagcacagagctggcaggcaccggatccaggtccatagcacaagctgagtgcaactgctgggctgaatgagaggagtgagcctag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14980331 237 - 90373283 cctcaggactccccaagtaa--gactgtaacaccccctggggctccacagttgctggcatctc--agttttcaggagccaccgcagcccccttgtccagacactggcacccaagcagaagtgattcaagacagcacacccggaccagtcatggactgagtgcagagctggcaggcaccggatccaggtccatagcataagctgagtgcaactgctgggctgaatgagaggagtgagcctag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2147962 239 + 4234846 cctcaggactccccaagcaa--gactgtaacaccccctggggctccacagttgctggcatctctgagttttcaggagccactgcagcccccttgtccagacactggcacccaagcagaagtgattcaagacagcacacctggaccagtcatggactgagcacagagctggcaggcaccggatccaggtccatagcacaagctgagtgcaactgctgggctgaatgagaggagtgagcctag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 154613 239 - 13750039 cctcaggactccccaagcaa--gactgtaacaccccctggggctccacagttgctggcatctctgagttttcaggagccactgcagcccccttgtccagacactggcacccaagcagaagtgattcaagacagcacacccggaccagtcatggactgagtgcagagctggcaggcaccggctccaggtccatagcacaagctgagtgcaactgctgggctgaatgagaggagtgagcctag i colAng1.NW_012120598v1 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e aotNan1.NW_018487195v1 8728799 93 + 9889416 I e cebCap1.NW_016107322v1 9592510 243 - 14377064 I e saiBol1.JH378168 5016305 0 + 13128814 C e calJac3.chr21 21908388 0 + 50472720 C e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=24048.000000 s hg38.chr21_KI270874v1_alt 44978 4 + 166743 caga s panTro5.chr21 3669496 4 + 33445071 caga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17296415 4 + 46275980 caga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3235471 4 - 13858734 caga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4417677 4 + 32716333 cagc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155372397 4 - 185818997 cagc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162195078 4 - 192294377 cagc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8673102 4 + 9440265 cagc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8404118 4 + 21915920 cagc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14980568 4 - 90373283 cagc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2148201 4 + 4234846 cagc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 154852 4 - 13750039 cagc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21908388 4 + 50472720 cggc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5016305 4 + 13128814 cggc i saiBol1.JH378168 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e aotNan1.NW_018487195v1 8728799 93 + 9889416 I e cebCap1.NW_016107322v1 9592510 243 - 14377064 I e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=1062288.000000 s hg38.chr21_KI270874v1_alt 44982 126 + 166743 aaacccagtgccaagcaaagcctgagcaaaggcaccactagccacagagctttcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggg-tcatctgagatctgcaaaagggtaag s panTro5.chr21 3669500 126 + 33445071 aaacccagtgccaagcaaagcctgagcaaaggcaccactagccacagagctttcctgctggcaaaggagcatcaaaagaatactgtgtcatttctggggg-tcatctgagatctgcaaaagggtaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17296419 126 + 46275980 aaacccagtgccaagcaaagcctgagcaaaggcaccactagccacagagctttcctgctggtaaaggagcatcaaaagaatactgtgtcatttctggggg-tcatctgagatctgcaaaagggtaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3235475 126 - 13858734 aaacccagtgccaagcaaagcctgagcaaaggcaccactagccacggaggtttcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggg-tcatctgagatctgcaaaagggtaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4417681 127 + 32716333 aaacccagtgccaagcaaaggctgagcaaaggcaccactggccacagaggtttcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctgggggctcatctgagatccgcgaaagggtgag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155372401 127 - 185818997 aagcccagtgccaagcaaagcctaagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgcaaaagggtgag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162195082 127 - 192294377 aagcccagtgccaagcaaagcctaagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgcaaaagggtgag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8673106 127 + 9440265 aagcccagtgccaagcaaagcctaagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgcaaaagggtgag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8404122 127 + 21915920 aagcccagtgccaagcaaagcctaagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgtaaaagggtgag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14980572 127 - 90373283 aagcccagtgccaagcaaagcctgagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgcaaaagggtgag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2148205 127 + 4234846 aagcccagtgccaagcaaagcctaagcaaagacaccactggctacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtgtcatttctggggactcatctgagatctgcaaaagggtgag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 154856 113 - 13750039 aagcccagtgccaagcaaagcctgagcaaagacaccactggccacagaggtctcctgctggcaaaggagcaccaaaagaatcctgtg--------------tcatctgagatctgcaaaagggtgag i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21908392 127 + 50472720 aaaccaagagccaaacaaagcctgagcaaaggtaccactggccaccaaggtttcctgccaggcaagcggcatcaaaagaattttgtgtcatttctggtggctcatctgagatctgcaaaagggtcag i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5016309 127 + 13128814 aaacccagagccaagcaaagcctgagcaaaggtaccactggccaccgaggtttcctgccagccaagcagcaccagaagaattttgtgtcatttctgggggctcgtctgagatctgcaaaagggtcag i saiBol1.JH378168 C 0 C 0 s aotNan1.NW_018487195v1 8728892 127 + 9889416 aaacccagagctaagcaaagcctgagcaacggtaccactggccactgaggtttcctgccagccaagcagcaccaaaagtattttgtgtcatttctgggggctcatctgagatctgcaaaagggtcag i aotNan1.NW_018487195v1 I 93 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e cebCap1.NW_016107322v1 9592510 243 - 14377064 I e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=5744527.000000 s hg38.chr21_KI270874v1_alt 45108 609 + 166743 taaaagtggacctctttcactttcatttc-gaggcttcttgtcctcagttttttttt--ctgaaaacagataaagcgctaggcctgtagcagccagttaagaacaaatggcatggctgcagaggatagatttgtt-ggggaggactttcacaacgcaccctcttgtccccatca-cccccaggtatcgagaatattggctttgttccaatccagtctcccttcacagaagtctagttatcatgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattacctgaagcttcctgggccagccctcaatccctgacagcccatt-cgggtgtcagccaagaccttcaatctttcttatgg-a-tttttttttcctttgcagaggtcatagctcctatctcttctttatatacaatgctaagggtgttgttgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcatcaggagtataattcagaacaatgtggtatgtgtccattcttagaaactaagaggatg-taacaattgagagttttctgtcccctgttaaaggaatcaatttgcatagggca s panTro5.chr21 3669626 612 + 33445071 taaaagtggacctctttcactttcatttc-gaggcttcttgtcctcagtttttttttttctgaaaacagataaagcgctaggcctgtagcagccagttaagaacaaatggcatggctgcagaggatagatttgtt-ggggaggactttcacaacgcaccctcttgtccccatca-cccccaggtatcgagaatattggctttgttccaatccagtctcccttcacagaagtctagttatcacgtggtatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattaccttaagcttcctgggccagccctcaatccctgacagcccatt-cgggtgtcagccaagaccttcaatctttcttatggca-tttttttttccttcgcagaggtcatagctcctatctcttctttatatacaatgttaagggtgttgttgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcatcaggagtataattcagaacaatgtggtatctgtccattcttagaaactaagaggatg-taacaattgagagttttctttcccctgttaaaggaatcaatttgcatagggca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17296545 610 + 46275980 taaaagtggacctctttcactttcatttc-gaggcttcttgtcctcagttttttttt--ctgaaaacagataaagcgctaggcctgtagcagccagttaagaacaaatggcatggctgcagaggatagatttgtt-ggggaggactttcacaacgcaccctcttgtccccatca-cccccaggtatcgagaatattggctttgttccaatccagtctcccttcacagaagtctagttatcacgtggtatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattacctgaagcttcctgggccagccctcaatccctgacagcccatt-cgggtgtcagccaagaccttcaatctttcttatggca-tttttttttccttcgcagaggtcatagctcctatctcttctttatatacaatgttaagggtgttgttgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcatcaggagtataattcagaacaatgtggtatctgtccattcttagaaactaagaggatg-taacaattgagagttttctttcccctgttaaaggaatcaatttgcatagggca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3235601 611 - 13858734 taaaagtggacctctttcactttcatttc-aaggcttcttgtcctcagttttttttt--ctgaaaacagataaagcactaggcctgtagcagccagttaagagcaaatggcatggctgcagaggatagatttgct-ggggaggactttcacaacgcaccctcttgtccccatca-cccccaggtatcgagaatattggctttgttccaatccagtctcccttcccagaagtctagttatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattacctgaagcttcctgggccagccctcaatccctgacagcccatt-cggatgtcagccaagaccttcaatctttcttatggcattttttttttccttcacagaggtcatagctcctatctcttctttatatacaatgttaagggtgttgttgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcatcaggagtataattcagaacaatgtggtatctgtccattcttagaaactaagaggatg-taacaattgagagttttctttcccctgttaaaggaatcaatttgcatagggca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4417808 610 + 32716333 taaaagtggacctctttcactttcatttc-aaggcttcttgtcctcagttttttttt-tctgaaaacagataaagcactaggcctgtagcagccagttaagagcgaatggcgtggctgcagaggatagatttgct-ggggaggactttcacaacgcaccctcttgt-cccatcg-cccccaggtattgagagtattggctttgttccaatccagtctcccttcacagaagtctagttatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaagggtacatctctgcattatctgaagcttcctgggccagccctcaatccctgacagcccatt-caggtgtcagccaagacctttaatctttcttatgtca-tttttttttcctttgcagtggtcatagctcctatctcttctttatatacaatgttaaggctgttgttgcaaaccacagagataagatgactgggtagaatgagcatttggctcagtcatcaggagtataattcagaagaatgtggtatctgtccattcttagaaactaagaggatg-taacaattgggagttttctttcccctgtttaaggaatcgatttgcacagggca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155372528 610 - 185818997 taaaagtggacctctttcactttcatttt-gaggcttcttgtcctcagacttttttt--ctgaaaacagataaagcactaggcctctagcagccagttaagagctcatagaatggctgcagaggacagatttgct-gggggggactttgacaacgcatcctcttgcccccatca-ccctcaggtattgagaatattggcttttttctaatccagtctcccttcacagaagtctagtcatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctaaacctctgcattacctgaagcttcctgggccagccaccaatccctgacagcccatt-cgagtgtcagtcaagaccttccatctttcttatggcc-tttttttttcttttgcagcagtcacagctcctatctcttccttatatacaatgttacgggtgttgttgcaaactacagagataatatgactgggtagcatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttagaaactaggaggatg-taaacattgagagctttctttcccctgttaaaggaatctatttgcttagggga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162195209 611 - 192294377 taaaagtggacctctttcactttcatttt-gaggcttcttgtcctcagacttttttt--ctgaaaacagataaagcactaggcctctagcagccagttaagagctcatagaatggctgcagaggacagatttgctggggggggactttgacaacgcatcctcttgcccccatca-ccctcaggtattgagaatattggcttttttctaatccagtctcccttcacagaagtctagtcatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctaaacctctgcattacctgaagcttcctgggccagccaccaatccctgacagcccatt-cgagtgtcagtcaagaccttcaatctttcttatggcc-tttttttttcttttgcagcagtcacagctcctatctcttccttatatacaatgttacaggtgttgttgcaagctacagagataatatgactgggtagcatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttagaaactaggaggatg-taaacattgagagctttctttcccctgttaaaggaatctatttgcttagggga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8673233 610 + 9440265 taaaagtggacctctttcactttcatttt-gaggcttcttgtcctcagacttttttt--ctgaaaacagataaagcactaggcctctagcagccagttaagagctcatagaatggctgcagaggacagatttgct-gggggggactttgacaacgcatcctcttgcccccatca-ccctcaggtattgagaatattggcttttttctaatccagtctcccttcacagaagtctagtcatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctaaacctctgcattacctgaagcttcctgggccagccaccaatccctgacagcccatt-cgagtgtcagtcaagaccttcaatctttcttatggcc-tttttttttcttttgcagcagtcacagctcctatctcttccttatatacaatgttacgggtgttgttgcaaactacagagataatatgactgggtagcatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttagaaactaggaggatg-taaacattgagagctttctttcccctgttaaaggaatctatttgcttagggga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8404249 610 + 21915920 taaaagtggacctctttcactttcatttt-gaggcttcttgtcctcagacttttttt--ctgaaaacagataaagcactaggcctctagcagccagttaagagctcatagaatggctgcagaggacagatttgct-gggggggactttgacaacgcatcctcttgcccccatca-ccctcaggtattgagaatattggcttttttctaatccagtctcccttcacagaagtctagtcatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctaaacctctgcattacctgaagcttcctgggccagccaccaatccctgacagcccatt-cgagtgtcagtcaagaccttcaatctttcttatggca-tttttttttcttttgcagcagtcacagctccgatctcttccttatatacaatgttacgggtgttgttgcaaaatacagagataatatgactgggtagcatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttagaaactaggaggatg-taaacattgagagctttctttcccctgttaaaggaatctatttgcttagggga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14980699 609 - 90373283 taaaagtggacctctttcactttcatttt-gaggcttcttgtcctcagacaattttt--ctgaaaacagataaagcactaggcctctagcagccagttaagagctaatagaatggctgcagaggacagttttgct-ggggggaactttgacaacacatccttttgcccccatca-ccctcaggtattgagaatattgattttt-tctaatccagtctcccttcacagaagtctagtcatcacatgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctacacctctgcattacctgaagcttcctgggccagccgccaatccctgacagcccatt-cgactgtcagtcaagaccttcaatctttctcatggca-ttcttttttcttttgcagcagtcacagctcctatctcttctttatatacaatgttaagggtgttgttggaaactacagagataatatgactgggtaacatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttagaaactaggaggatg-taaacattgagagctttctttcccctgttaaaggaatctatttgcttagggca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2148332 610 + 4234846 taaaagtggacctctttcactttcatttt-gaggcttcttgtcctcaaacttttttt--ctgaaagcagataaagcactaggcctctagcagccagttaagagctcatagaatggctgcagaggacagaattgcc-gggggggactttgacaacgcatcctcttgcccccatca-ccctcaggtattaagaatattggcttttatctaatccagtctcccttcacagaagtctagtcatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctaaacctctgcattacctgaagcttcctgggccagccaccaatccctgacagcccatt-cgagtgtcagtcaagaccttcaatctttcttatggca-tttttttttcttttgcagcagtcacagctcctatctcttccttatatacaatgttacgggtgttgttccaaactacagagataatatgactgggtagcatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctaatcttacaaactaggaggatg-taaacattgagagctttctttcccctgttaaaggaatctatttgcttagggca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 154969 603 - 13750039 taaaagtggacctctttcactttcatttt-gaggcttcttgtcct--gacttttttt--ctgaagacagataaagcactaggcctctagcagccagttaagagctaatagaatggctgcagaggacagatttgct--ggggggactttgacaacgcatcctcttgcccccatca-ccctcaagtattgagaatattggcttttttctaatccagtctcccttcacagaagtctagtcatcacgtgggatcaaaataaggtcctggggcaactgaaagtatctggccaaggctacacctctgcattacctgaagcttcctgggccagccaccaatccctgacagcccatt-cgagtgtcagtcaagaccttcaatctttcttatggca-tt-ttttttcttttgcagcagtcacaact---atctcttctttatatacaatgttaagggtgttgttgcaaactacagagataatatgactgggtagcatgagcatttggctcaggcatcaggagtataattcagaacaatgtagtatctgtctattcctagaaactaggaggatg-taaacattgagagctttctttcccctgttaaaggaacctatttgcttagggca i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21908519 610 + 50472720 taaaagtggacctttttcacttttattttcaaggcttcttgtcctcaga-ttttttt--ctgaaaatagagaaagcactgggcctctagcagccagttaagagcgaatggcatgactgcagaggacagatttcct-tgagaagactttgacagcacctcctcctgtccccgttg-cccccagatattaagaatattggctttgttccaatccagtctcccttcacagaagactagccatcatatggcatcagaataaggtcctggaataactgaagatatctggccaaggctacgcctctgcattacctgaagcttcctgggccag-ccccaatccctgacagcccatt-agggtattggccaagacctccaatctttcttatggca-gtttttttccttctgcacctgtcatggctcctaactcttctttacacacaatgttatgggtgttgctgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcctcaggagtataattcagaacaatgtggtatctgtctattcttagaaactaggaggatcataacaattgagagttttgttacccctgttaaaggtatccatttgcacagggca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5016436 612 + 13128814 taaaagtggacctttttcactttcattttcaaggcttcttgccctcaga--tgtttt--ctgaaaatagagaaagcactgggcctctagcagccagttaagagcgaatggcatggctgcagaggacagatttgct-tgggaagattttgacaacacctcttcctgtccccattgccccccagatattaagaatgttggctttattccaatccagtctcccttcacagaagactagccatcacgtgggatcagaataaggtcctgggacaactgaaggtatctagccaaggctacacctctgtattacctgaagcttcctgggccagcccccaatccctgactgcccgtt-agggtattggccaagacctccaatctatcttacggtatttttttttccttctgcacctgtcacggctcctaactcttctttattcacaatgttaaggatgttgttgaaaaacacagagataatatgactgggtagaatgagcatttggctcagtcctcaggagtataattcagaagaatgtagtatctgtctattcttagaaactgggaggatgataataattgagagttttgttacccctgttaaaggtatccatttgcatagggca i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9592753 611 - 14377064 taaaagtggatctttttcactttcattttcaaggcttcttgttctcaga-ttttttt--ctgaaaatagagaaagcactgggcctctagcagccagttaagagcgaatggcatggctgcagaggacagatttgct-tgggaagattttgacaacacctcctcctgtccccattgccccccagatactaagaatgttggctttattccaatccagtctcccttcacagaagactagccatcacgtgggatcagaataaggtcctgggacaactgaaggtatctggccaaggctacacctctgtattacctgaagcttcctgggccagcccccaatccctgacagcccgtt-agggtattggccaagacctccaatctttcttacggcatttttttttccttctgcacctgtcatggctcctaa--cttctttatacacaatgttaagggtgttgttgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtccccaggagtataattcagaacaatgtagtatctgtctattcttagaaactaggaggatgataataattgagagttttattactcctgttaaaggtattcatttgcatagggca i cebCap1.NW_016107322v1 I 243 I 47 s aotNan1.NW_018487195v1 8729019 611 + 9889416 taaaagtggacctttttcactttcattttcaaggcttcttgtcttcaga-ttttttt--ctgaaaatagagaaagcactgggcctctagcagccagttaagagcgaatggcatggctgcagaggacagatttgct-tgggaagattttggcgacacctcctcctgtccccattg---ccctgatattaagaatgttggctttgttccaattcggtctcccttcacagaagactagccatcacgtgggatcagaataaggtcctgggacaactgaaggtatctggccaaggctacacctctgtattacctgaagcttcctgggccagcccccaatccttaaaagcccattaagggtattggccaagacctccaatctttcttacggcatttttttttccttctgcacctgtcacggctcctaactcttcttgatacacaatgttaagggtgttgttgcaaaccacagagataatatgactgggtagaatgagcatttggctcagtcctcaggagtataattcagagcaatgtagtatctgtctattcttagaaactaggaggatgataacaattgagagttttgttacccctgttaacggtatccatttgcatagggca i aotNan1.NW_018487195v1 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=99957.000000 s hg38.chr21_KI270874v1_alt 45717 17 + 166743 agagcctatttcccccc s panTro5.chr21 3670238 17 + 33445071 agagcctatttcccccc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297155 17 + 46275980 agagcctatttcccccc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236212 17 - 13858734 agagcctatttcccccc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418418 17 + 32716333 agagcctatttcccccc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373138 17 - 185818997 agagcctatttcccccc i rheMac8.chr3 C 0 I 56 s macFas5.chr3 162195820 17 - 192294377 agagcctatttcccccc i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 8673843 17 + 9440265 agagcctatttcccccc i macNem1.NW_012019910v1 C 0 I 57 s cerAty1.NW_012002954v1 8404859 17 + 21915920 agagcctatttcccccc i cerAty1.NW_012002954v1 C 0 I 52 s chlSab2.chr2 14981308 16 - 90373283 agagcc-atttcccccc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2148942 17 + 4234846 agagcctatttcccccc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 155572 17 - 13750039 agagcatatttcccccc i colAng1.NW_012120598v1 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e aotNan1.NW_018487195v1 8729630 0 + 9889416 C e cebCap1.NW_016107322v1 9593364 47 - 14377064 I e saiBol1.JH378168 5017048 0 + 13128814 C e calJac3.chr21 21909129 0 + 50472720 C e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=119286.000000 s hg38.chr21_KI270874v1_alt 45734 29 + 166743 agccaccttccccttccctgcatttaagg s panTro5.chr21 3670255 29 + 33445071 agccaccttccccttccctgcatttaagg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297172 29 + 46275980 agccaccttccccttccctgcatttaagg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236229 29 - 13858734 agccaccttccccttccctgcatttcagg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418435 29 + 32716333 aggcaccttccccttccctgcatttaagg i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162195838 29 - 192294377 aagcaccttaccctcccctgcatttaagg i macFas5.chr3 I 1 I 3 s chlSab2.chr2 14981324 29 - 90373283 aagcaccttcccctcccctgcatttaagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2148959 29 + 4234846 aagcaccttcccctcccctgcatttaagg i manLeu1.NW_012102865v1 C 0 I 18 s colAng1.NW_012120598v1 155589 29 - 13750039 aagcaccttcccctcccctgaatttaagg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909129 23 + 50472720 ------CTGTCACCTCCCTGCATTTAAGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017048 23 + 13128814 ------CCTTCACCTGTCTGCATTTAAGG i saiBol1.JH378168 C 0 C 0 s aotNan1.NW_018487195v1 8729630 23 + 9889416 ------CCTTCACCTGTCTGCATTTAAGG i aotNan1.NW_018487195v1 C 0 I 41 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e cebCap1.NW_016107322v1 9593364 47 - 14377064 I e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e cerAty1.NW_012002954v1 8404876 52 + 21915920 I e macNem1.NW_012019910v1 8673860 57 + 9440265 I e rheMac8.chr3 155373155 56 - 185818997 I a score=-10534.000000 s hg38.chr21_KI270874v1_alt 45763 16 + 166743 -------------------------------------gttcc--------tcccactgccc s panTro5.chr21 3670284 16 + 33445071 -------------------------------------gttcc--------ccccactgccc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297201 16 + 46275980 -------------------------------------gttcc--------ccccactgccc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236258 16 - 13858734 -------------------------------------gttcc--------ccccactgccc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418464 17 + 32716333 -------------------------------------gttcct-------cccctccaccc i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162195870 23 - 192294377 -------------------------------------gttttttttt-tgtttgtttgttt i macFas5.chr3 I 3 I 2 s chlSab2.chr2 14981353 16 - 90373283 -------------------------------------gtttt--------tttgttttttt i chlSab2.chr2 C 0 I 2 s colAng1.NW_012120598v1 155618 16 - 13750039 -------------------------------------gtttt--------tttttttttct i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909152 61 + 50472720 TGTttttgttttgttttgttttgttttgttttgttttgttttgttttgttttgttttgttC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017071 31 + 13128814 tgt------------------------------tttggttttgttttgctttgttttgttC i saiBol1.JH378168 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e aotNan1.NW_018487195v1 8729653 41 + 9889416 I e cebCap1.NW_016107322v1 9593364 47 - 14377064 I e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e cerAty1.NW_012002954v1 8404876 52 + 21915920 I e macNem1.NW_012019910v1 8673860 57 + 9440265 I e manLeu1.NW_012102865v1 2148988 18 + 4234846 I e rheMac8.chr3 155373155 56 - 185818997 I a score=2354.000000 s hg38.chr21_KI270874v1_alt 45779 1 + 166743 c s panTro5.chr21 3670300 1 + 33445071 c i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297217 1 + 46275980 c i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236274 1 - 13858734 c i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418481 1 + 32716333 c i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373211 1 - 185818997 t i rheMac8.chr3 I 56 I 1 s macFas5.chr3 162195895 1 - 192294377 t i macFas5.chr3 I 2 I 1 s macNem1.NW_012019910v1 8673917 1 + 9440265 t i macNem1.NW_012019910v1 I 57 I 1 s chlSab2.chr2 14981371 1 - 90373283 t i chlSab2.chr2 I 2 I 1 s colAng1.NW_012120598v1 155634 1 - 13750039 c i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909213 1 + 50472720 C i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017102 1 + 13128814 C i saiBol1.JH378168 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e aotNan1.NW_018487195v1 8729653 41 + 9889416 I e cebCap1.NW_016107322v1 9593364 47 - 14377064 I e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e cerAty1.NW_012002954v1 8404876 52 + 21915920 I e manLeu1.NW_012102865v1 2148988 18 + 4234846 I a score=-16818.000000 s hg38.chr21_KI270874v1_alt 45780 3 + 166743 ccg- s panTro5.chr21 3670301 3 + 33445071 ccg- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297218 3 + 46275980 ccg- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236275 3 - 13858734 ccg- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418482 3 + 32716333 cca- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373213 2 - 185818997 tc-- i rheMac8.chr3 I 1 C 0 s macFas5.chr3 162195897 2 - 192294377 tc-- i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 8673919 2 + 9440265 tc-- i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 8404928 2 + 21915920 tc-- i cerAty1.NW_012002954v1 I 52 C 0 s chlSab2.chr2 14981373 2 - 90373283 tc-- i chlSab2.chr2 I 1 C 0 s colAng1.NW_012120598v1 155635 1 - 13750039 -c-- i colAng1.NW_012120598v1 C 0 C 0 s cebCap1.NW_016107322v1 9593411 3 - 14377064 tc-c i cebCap1.NW_016107322v1 I 47 C 0 s aotNan1.NW_018487195v1 8729694 3 + 9889416 tC-C i aotNan1.NW_018487195v1 I 41 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e saiBol1.JH378168 5017103 0 + 13128814 C e calJac3.chr21 21909214 0 + 50472720 C e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e manLeu1.NW_012102865v1 2148988 18 + 4234846 I a score=2829717.000000 s hg38.chr21_KI270874v1_alt 45783 295 + 166743 caccttgtcaggagtcaacagcttcaccttagcattgtgcttatgatagagaagcaaccgaggagctgccctactggttgttggctgcaatttgctgaggaccacctgggactagtttaatgggtctgtgtacactcctgaggcacctttttgtcccaaattcaattccaagcttcaggttgaaggcctaaagagggaaaattagatctgagggacccagaggcagtcagagtggaaggctagggcacagcccgagtgagcatgactatccttgctaattaggccttcccacttc s panTro5.chr21 3670304 295 + 33445071 caccttgtcaggagtcaacagcttcaccttagcattgtgcttatgatagagaagcaaccgaggagctgccctactggttgttggctgcaatttgctgaggaccacctgggactagtttaatgggtctgtgtacactcctgaggcacctttttgtcccaaattcaattccaagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagtcagagtggaaggctagggcacagcccgagtgagcatgactatctttgctaattaggccttcccacttc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297221 295 + 46275980 caccttgtcaggagtcaacagcttcaccttagcattgtgcttatgatagagaagcaaccaaggagctgccctactggttgttggctgcaatttgctgaggaccacctgggactagtttaatgggtctgtgtacactcctgaggtacctttttgtcccaaattcaattccaagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagtcagagtggaaggctagggcacagcccgagtgagcatgactatctttgctaattaggccttcccacttc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236278 295 - 13858734 caccttgtcaggagtcaacagcttcaccttagcattgtgcttatgatagagaagcaaccgaggagctgccctactggttgttggctgcaatttgctgaggaccacctgggactagtttaatgggtctgtgtacactcctgaggcacctttttgtcccaaattcaattccaagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagtcagagtggaaggctagggcacagcccgagtgagcatgactatccttgctaattaggccttcccacttc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418485 295 + 32716333 caccttgtcaggagtcaacagcttcaccttagcattgtgcttacgatagagaagcaaccgaggagctgccctactggttgttggctgcaatttgctgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcacctttttgtcccaaattcaattcccagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacccagaagcagtcagagcggaaggctagggcacagccggagtgagcatgactatccctgctaattaggccttcccacttc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373215 294 - 185818997 caccttgtcaagagtcagcgacttcaccttagcattgtgcttatgatggagaagcaacagaggagttgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcaccttattgtcccaaattc-attccaagcttcaagttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagttacagcggaaggctagcacacagcccaagtgagcatgactctccctgctaattaggccttcccacttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162195899 295 - 192294377 caccttgtcaagagtcaacgacttcaccttagcattgtgcttatgatggagaagcaacagaggagttgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcaccttattgtcccaaattcaattccaagcttcaagttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagttacagcggaaggctagcgcacagcccaagtgagcatgactctccctgctaattcggccttcccacttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8673921 295 + 9440265 caccttgtcaagagtcaacgacttcaccttagcattgtgcttatgatggagaagcaacagaggaattgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcaccttattgtcccaaattcaattccaagcttcaagttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagttacagcggaaggctagcgcacagcccaagtgagcatgactctccctgctaattaggccttcccacttc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8404930 295 + 21915920 caccttgtcaggagtcaacgacttcaccttagcattgtgcttatgatggagaagcaacagaggagttgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcaccttattgtcccaaattcaattccaagcttcaggttgaaggcctaaaaagggagaactagatctgagggacccagaggcagttacagcggaaggctagcgcacagcccaagtgagcatgactatccctgctaattaggccttcccacttc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981375 295 - 90373283 caccttgtcaggagtcaacgacttcaccttagcattgtgcttatgatggagaagcaacagaggagttgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatcggtctgtgtacattcctgaggcaccttattgtcccaaattcaattccaagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacctagaggcagttacagcggaaagctagcgcacagcccaagtgagcatgactatacctgctaattaggccttcccacttc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149006 295 + 4234846 caccttgtcaggagtcaacgacttcaccttagcattgtgcttatgatggagaagcaacagaggagttgccctactggttgttggctgcaatttggtgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcaccttattgtcccaaattcaattccaagcttcaggttgaaggcctaaaaagggaaaactagatctgagggacccagaggcagttacagcggaaggctagcgcacagcccaagtgagcatgactatccctgctaattaggccttcccacttc i manLeu1.NW_012102865v1 I 18 C 0 s colAng1.NW_012120598v1 155636 294 - 13750039 -accttgtcaggagtcaacgacttcaccttagcattgtgcttatgatggagaagcaacagaggagctgccctactggttgttggctgcagtttggtgagggccacctgggactagtttaatgggtctgtgtacactcctgaggcaccttattgtcccaaattcaattccaagcttcaggttgaaggcctaaaaggggaaaactagatctgagggacccagaggcagttacagcggaaggctagcgcacagcccaagtgagcatgactatccctgctaattaggccttcgcacttc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909214 289 + 50472720 CACCATGTGAGGAGTCAacagcttcacctgagcattctgcttatgac-----agcaacagaggagcttctctactggttgttggctacaatttggtgagggtcacctggaactaatttaatgggtctatacacactcttgaggcacctttttgtcccaaattcaattcaaagcttcaggttgac-gccttcaaaaggaatactagatctgagggacccagagtcagctacagtggaaggctaaggcacagcccaagtgaccatgactgtccctgctaattcactcttcccacttc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017103 288 + 13128814 CACCATGTGAGGAGTctacagcttcaccttagcattctgcttatgac-----agcaacagaggagctgccctgctggttgtttgctacaatttggcgagggtcacctgggactaatttaatgggtctgtacacacacttgaggcacctttttgtcccaaattcaattcaaagcttcaggttgaa-gccttcaaaaggagaactagatctgagggacccagagtcagttacagtggaaggctaaggcacagccc-agtgagcataactgtccctgctaatttgctcttcctactcc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9593414 289 - 14377064 caccatgtgaggagtcaacaACTTCACCTTAGCATTctgcttatgac-----agcaacaaaggacctgccccactggttgttggctacaatttggcaagggtcacccgggactaatttaatgggtctatacacactcttgaggcacgtttttgtcccaaattcaattcaaagcttcaggttgaa-gccttcaaaaggaaaactagatctgagggacccagagtcagttaccgtggaaggctaaggcacagcctaagtgagcataactgtccctgctaattcgctcttcccatgtc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8729697 289 + 9889416 CACCACGTGAGGAGTCAacagcttcaccttagcattctgcttatgac-----agcaacagaggagatgccctactgattgttggctacaatttggcgagggtcacctgggaccaatttaatgggtctatacacactcttgaggcacctttttgtaccaaattcaattcaaagcttcagattgaa-gccttcaaaaggaaaactagatctaagggacccagagtcagttacagtagaaggctaaggcacagcccaagtgagcataaccgtccctgctaattcactcttcccacttc i aotNan1.NW_018487195v1 C 0 C 0 e dasNov3.JH568778 3565816 0 - 6883506 C e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=77056.000000 s hg38.chr21_KI270874v1_alt 46078 6 + 166743 actggg s panTro5.chr21 3670599 6 + 33445071 actggg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297516 6 + 46275980 actggg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236573 6 - 13858734 actggg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418780 6 + 32716333 actggg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373509 6 - 185818997 actggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196194 6 - 192294377 actggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674216 6 + 9440265 actggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405225 6 + 21915920 actggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981670 6 - 90373283 actggg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149301 6 + 4234846 actggg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 155930 6 - 13750039 ACTAGG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909503 6 + 50472720 actggg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017391 6 + 13128814 actggg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9593703 6 - 14377064 actggg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8729986 6 + 9889416 actggg i aotNan1.NW_018487195v1 C 0 C 0 s dasNov3.JH568778 3565816 6 - 6883506 ACTGGG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19160773 5873 + 47401472 I e otoGar3.GL873528 20728285 0 - 38779656 C e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=83341.000000 s hg38.chr21_KI270874v1_alt 46084 7 + 166743 aagaACT s panTro5.chr21 3670605 7 + 33445071 aagaACT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297522 7 + 46275980 aagaACT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236579 7 - 13858734 AAGAACT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418786 7 + 32716333 aagaATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373515 7 - 185818997 aagaATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196200 7 - 192294377 aagaATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674222 7 + 9440265 aagaATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405231 7 + 21915920 aagaATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981676 7 - 90373283 aagaATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149307 7 + 4234846 aagaATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 155936 7 - 13750039 AAGAATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909509 7 + 50472720 AAGAACT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017397 7 + 13128814 AAGAATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9593709 7 - 14377064 AAGAATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8729992 7 + 9889416 AAGAATT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20728285 7 - 38779656 AAGAACA i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3565822 7 - 6883506 AAGAATA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19160773 5873 + 47401472 I e canFam3.chr31 13794223 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=75874.000000 s hg38.chr21_KI270874v1_alt 46091 7 + 166743 ATCATCA s panTro5.chr21 3670612 7 + 33445071 ATCATCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297529 7 + 46275980 ATCATCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236586 7 - 13858734 ATCATCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418793 7 + 32716333 ATCATCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373522 7 - 185818997 ATCATCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196207 7 - 192294377 ATCATCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674229 7 + 9440265 ATCATCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405238 7 + 21915920 ATCATCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981683 7 - 90373283 ATCATCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149314 7 + 4234846 ATCATCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 155943 7 - 13750039 ATCATCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909516 7 + 50472720 GTCATCA i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5017404 7 + 13128814 GTCATCA i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9593716 7 - 14377064 GTCATCA i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8729999 7 + 9889416 GTCATCA i aotNan1.NW_018487195v1 C 0 I 1 s otoGar3.GL873528 20728292 7 - 38779656 GACCCCA i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 13794223 4 + 39895921 ---ATCC i canFam3.chr31 C 0 I 3 s dasNov3.JH568778 3565829 7 - 6883506 GCCCTTA i dasNov3.JH568778 C 0 I 1 e micMur3.chr31 19160773 5873 + 47401472 I e mm10.chr16 78096641 555 + 98207768 I a score=1506713.000000 s hg38.chr21_KI270874v1_alt 46098 115 + 166743 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAAGATTACATCTGCAGAGCAGACACGCAAGTGGTTCTC--------AGGAACCATTCAGTTTT---TAAAATA------ s panTro5.chr21 3670619 115 + 33445071 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAAGATTACATCTGCAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297536 115 + 46275980 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAAGATTACATCTGCAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236593 115 - 13858734 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAAGATTACATCTGCAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418800 106 + 32716333 TGACTTTGATGTGCAATCAGAATTAAGAACTAATTCTCT---------GTGTGAGGATTACATCTGCAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373529 115 - 185818997 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAAAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196214 115 - 192294377 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAAAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674236 115 + 9440265 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405245 115 + 21915920 TGACTTTGATGTGAACTCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981690 115 - 90373283 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGAGCAGACAGGCAAGTGGTTCCC--------AGAAACCATTCAGTTTT---TAAAATA------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149321 115 + 4234846 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGAGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 155950 115 - 13750039 TGACTTTGATGTGAAATCAGAATTAAGAACTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGAGCAGACAGGCAAGTAGTTCTC--------AGAAACCATTCAGTTTT---TAAAATA------ i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909524 111 + 50472720 TGACTTTGATGTAAAACAAAA----AGAGCTAATTCTCTGAACTTACAGTGGGAGGATTACATCTACAGTGCAGACAGGCAAGTGGTTCTC--------AGAAACCACTTAATTTT---TAAAATA------ i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5017412 109 + 13128814 TGTCTTTGATGTAAAATAAAA------AGCTAATTCTCTGAACTTACAGTGTGAGGATTACACCTACAGTGCAGACAGGAAAGTGGTTCTC--------AGAAACCATTTAATTTT---TAAAATA------ i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9593724 111 - 14377064 TGACTTTGATGTAAAATAAAA----AGAGCTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGTGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTTAATTTT---TAAAATA------ i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8730007 111 + 9889416 TGACATTGCTGTAAAATAAAA----AGAGCTAATTCTCTGAACTTACAGTGTGAGGATTACATCTACAGTGCAGACAGGCAAGTGGTTCTC--------AGAAACCATTTAATTTT---TAAAATA------ i aotNan1.NW_018487195v1 I 1 C 0 s micMur3.chr31 19166646 111 + 47401472 TGATTTTGATGTGAAATCAGAATTAAGAGCTAACTCTGTGAACTTACAGTGTGAGGATCATGCCTTCAGATCAGATAGG-AAGTAGGTCTC--------AGAAACCATTCAG---T---TAAAAAA------ i micMur3.chr31 I 5873 C 0 s otoGar3.GL873528 20728300 110 - 38779656 TGATTTTGATGTGAAATCAGAATTAAGAGCTAACTC--TGAATTTACAGTGTGAGGATCACACCCTCAGAGCAGACAGGTAAGTAGTTCTC--------AGAAACCGTTCAC---T---TAAAAAA------ i otoGar3.GL873528 I 1 I 280 s canFam3.chr31 13794230 121 + 39895921 GGACTTTAATGTAAAATCAGAATTAAGACCTAA--CTCTGAATTCCCAGTATGAGGATCATGCCTCCAAAATACATTGGCAAGTAGTTTTCAACTTAAAAGAAAATATCTCTCCTC---TGCACCA------ i canFam3.chr31 I 3 I 6 s dasNov3.JH568778 3565837 123 - 6883506 TAGCTTTGATGTGAAATTAGAATTAAGTACTAACTCTCTGTACTCACAGT-TGAGGATCACTCCTCCAGAGCAGATGGACAGGTATTTCTT--------AGAAACCATTCATCCTTACCAAAAATAATAATA i dasNov3.JH568778 I 1 C 0 e mm10.chr16 78096641 555 + 98207768 I a score=40748.000000 s hg38.chr21_KI270874v1_alt 46213 4 + 166743 -CAAT s panTro5.chr21 3670734 4 + 33445071 -CAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297651 4 + 46275980 -CAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236708 4 - 13858734 -CAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418906 4 + 32716333 -CAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373644 4 - 185818997 -CAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196329 4 - 192294377 -CAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674351 4 + 9440265 -CAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405360 4 + 21915920 -CAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981805 4 - 90373283 -CAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149436 4 + 4234846 -CAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156065 4 - 13750039 -CAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909635 4 + 50472720 -CAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017521 4 + 13128814 -GAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9593835 4 - 14377064 -TAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730118 4 + 9889416 -CAAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19166757 4 + 47401472 -TAAT i micMur3.chr31 C 0 I 5 s canFam3.chr31 13794357 4 + 39895921 -AAAT i canFam3.chr31 I 6 C 0 s dasNov3.JH568778 3565960 4 - 6883506 ATAA- i dasNov3.JH568778 C 0 C 0 e otoGar3.GL873528 20728410 280 - 38779656 I e mm10.chr16 78096641 555 + 98207768 I a score=876730.000000 s hg38.chr21_KI270874v1_alt 46217 68 + 166743 TTCTGGCAGTATGTAAGATTGGTCATTACAAACCC-TGCTCCTCTCTCCCTACCTTAATAACCAGGACC s panTro5.chr21 3670738 68 + 33445071 TTCTGGCAGTATGTAAGATTGGTCATTACAAACCC-TGCTCCTCTCTCCCTACCTTAATAACCAGGACC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297655 68 + 46275980 TTCTGGCAGTATGTAAGATTGGTCATTACAAACCC-TGCTCCTCTCTCCCTACCTTAATAACCAGGACC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236712 68 - 13858734 TTCTGGCAGTATGTAAGATTGGTCATTACGAACCC-TGCTCCTCTCTCCCTACCTTAATAACCGGGACC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418910 68 + 32716333 TTCTGGCAGTATGTAAGACTGGTCATTACGAACCC-TGCTCCTCTGTCCCTACCTTAATAACCAGGACC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373648 68 - 185818997 TTCTGGCAATATGTAAGATTGCTCATTATGGACCC-TGCTCTTCTGTCCCTACCTTAATAACCAGGACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196333 68 - 192294377 TTCTGGCAATATGTAAGATTGCTCATTATGGACCC-TGCTCTTCTGTCCCTACCTTAATAACCAGGACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674355 68 + 9440265 TTCTGGCAATATGTAAGATTGCTCATTATGGACCC-TGCTCTTCTGTCCCTACCTTAATAACCAGGACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405364 68 + 21915920 TTCTGGCAATATGTAAGACTGCTCATTATGGACCC-TGCTCCTCTGTCCCTACCTTAATAACCAGGACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981809 68 - 90373283 TTCTGGCAGTATGTAAGACTGCTCATTATGAACCC-TGCTTCTCTGTCCCTACCTTAATAACCAGGACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149440 69 + 4234846 TTCTGGCAATATGTAAGACTGCTCATTATGGACCCTTGCTCCTCTGTCCCTACCTTAATAACCAGGACC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156069 68 - 13750039 TTCTGGCAGTATGTAAGATTGCTCATTATGGACCC-TGCTCCTCTGTCCCTACCTTAATAACCAGGACC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909639 68 + 50472720 TTCTGGCAGTATGTAAGATTGGCCATTATGGATCC-TGCTCCTCTGTCCCTACCTTAATCACCAGGACC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017525 68 + 13128814 TTCTGGCAGTATGTAAGATTGGCCATTATGGATCC-TGCTCCTCTGTCCCTATCTTAATCTCCAGGACC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9593839 68 - 14377064 TTCTGTCAGTGTGTAAGATTAGCCATTATGGATCC-TGCTCCTCTGTCCCTACCTTAATCACCAGGACC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730122 68 + 9889416 TTCTGGCAGTATGTAAGATTGGCCATTATGGATCC-TGCTCCTCTGTCCCTACCTTAATCACCAGGACC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19166766 68 + 47401472 TCCCGGCAGCATGTGAGATTGGTCATTACGAACCC-AGCTCCTCTGTCCCTACATTAACTATCTGTACT i micMur3.chr31 I 5 C 0 s otoGar3.GL873528 20728690 68 - 38779656 tcCCAGGGGTATGTGAGATTAGTTATTACGAACCC-GGCTCCCCTGCCCCTACCTTAACCGATCGTACT i otoGar3.GL873528 I 280 C 0 s canFam3.chr31 13794361 68 + 39895921 TCCCTCCAATATGGAAGACTGGCCACTATCAACCT-ACCCCCTTTACCCCTACCTTGATCACCAGTACC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3565964 64 - 6883506 TTCCTCCAGTATTTAAGATTGACCATAATCTACCC-TGTTCTTCT----CTTTTTTAATCATCATTTCC i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78096641 555 + 98207768 I a score=719471.000000 s hg38.chr21_KI270874v1_alt 46285 47 + 166743 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAGTCC s panTro5.chr21 3670806 47 + 33445071 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAGTCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297723 47 + 46275980 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAGTCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236780 47 - 13858734 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAGTCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4418978 47 + 32716333 ACACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAGTCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373716 47 - 185818997 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAATCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196401 47 - 192294377 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAATCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674423 47 + 9440265 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAATCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405432 47 + 21915920 CCACTTTTCAACATTTTGAATATCACCA-GTCTTAGGGAACCAAATCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981877 47 - 90373283 CCACTTTTCAACATTCTGAATATTACCA-GTCTTAGGGAACCAAATCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149509 47 + 4234846 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAATCC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156137 47 - 13750039 CCACTTTTCAACATTCTGAATATCACCA-GTCTTAGGGAACCAAATCC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909707 47 + 50472720 CGACTTTTCAACCTTTTGAATATCACCA-GTCTTAGGGAACCAAGTCC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017593 47 + 13128814 CCACTTTTCAACCTTCTGAATAGCACCA-GTTTTAGGGAACCAAGTCC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9593907 47 - 14377064 CCACTTTTCAACCTTCTGAATATCACTA-GTCTTAGGGAACCAAGTCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730190 47 + 9889416 CTACTTTTCAAACTTTTGAATATCACCA-GTCTTAGGGAACCAAGTCC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19166834 48 + 47401472 CCACTTTTCAACATTCTGCATATCATCACGTCTTAGGGAACCAGGTCC i micMur3.chr31 C 0 I 58 s proCoq1.NW_012144079v1 1049019 47 + 2694913 CCACTTTTCAACATTCTGCATATCATCG-ATCTTAGGGAACCAGGTCC i proCoq1.NW_012144079v1 N 0 I 58 s otoGar3.GL873528 20728758 42 - 38779656 CCACTGTTCAACACCCTGCATATCATCA-GTCTTAGGAAGCAC----- i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 13794429 47 + 39895921 GTACTTCTCAACATTCTGCATATTATCA-GCCTTTGCAAACAAAATTC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566028 47 - 6883506 CCACATTTCTGGACTCTGCATATTATCA-GTCTTAGCAACCAAAATCT i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78096641 555 + 98207768 I a score=660703.000000 s hg38.chr21_KI270874v1_alt 46332 58 + 166743 TCCACTCCATCAAACACTTCTAGAAACTGCTTCGTAAAAGTATCACTTGTGAATCC---AG s panTro5.chr21 3670853 58 + 33445071 TCCACTCCATCAAACACTTCTAGAAACTGCTTCATAAAAGTATCACTTGTGAATCC---AG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297770 58 + 46275980 TCCACTCCATCAAACACTTCTAGAAACTGCTTCGTAAAAGTATCACTTGTGAATCC---AG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236827 58 - 13858734 TCCACTCCATCATACACTTCTAGAAACTGCTTCGTAAAAGTATCACTTGTGAATCC---AG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419025 58 + 32716333 TCCACTCCATCAAACACTTCTAGAAACTGCTTCGTAAAAGTATCACTTGTGAATCC---AG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373763 58 - 185818997 TCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCC---AG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196448 58 - 192294377 TCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCC---AG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674470 58 + 9440265 TCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCC---AG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405479 58 + 21915920 TCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCC---AG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981924 58 - 90373283 TCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCC---AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149556 58 + 4234846 TCCACTCCATCAAACACTTCTAGAAACTTCTTTGTAAAAGTGTCACTTGTGAATCC---AG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156184 61 - 13750039 TCCACTCCATCAAACACTTCTACAAACTTCTTTGTAAAAGTGTCACTTGTGAATCCAGAAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909754 58 + 50472720 TCCACTCCATCAAATACTTCTAGAAACTGCTTCATAAAAGCATTGCTTATGAATCC---AG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017640 58 + 13128814 CCTACTCCATCAAACACTTCTAGAAACTGCTTCATAAAAGCATTGCTTGTGAATCC---AG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9593954 56 - 14377064 TTTACTTCATCAAACACTTCTAGAAACTGCTTCATAAAAGCATTGCTTGTGAATCC----- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730237 58 + 9889416 TTCACTCCATCAAACACTTCTAGAAACTGCTTCATAAAAGCATTGTTTGTGAATCC---AG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20728801 57 - 38779656 TCTCTCTCTTTAAACAGTTCTACATTCTGGTCAACGAAAGAATCG-TCAGGACTGC---AG i otoGar3.GL873528 I 1 C 0 s canFam3.chr31 13794476 57 + 39895921 CTTACCCCATCAAACACTTCTACAGTCTTCCTTACAAAAATATCTC-CATGATTCC---AG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566075 56 - 6883506 CCCATTCCATCAAACACTTCTACAACCTGCCTCATAAAAATACCCC--ATGATTCC---AG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e micMur3.chr31 19166882 58 + 47401472 I e mm10.chr16 78096641 555 + 98207768 I a score=38862.000000 s hg38.chr21_KI270874v1_alt 46390 3 + 166743 AAG s panTro5.chr21 3670911 3 + 33445071 AAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297828 3 + 46275980 AAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236885 3 - 13858734 AAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419083 3 + 32716333 AAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373821 3 - 185818997 AAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196506 3 - 192294377 AAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674528 3 + 9440265 AAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405537 3 + 21915920 AAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981982 3 - 90373283 AAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149614 3 + 4234846 AAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156245 3 - 13750039 AAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21909812 3 + 50472720 AAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017698 3 + 13128814 AAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9594010 2 - 14377064 -AG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730295 3 + 9889416 AAG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20728858 3 - 38779656 AAG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13794533 3 + 39895921 AAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e mm10.chr16 78096641 555 + 98207768 I a score=3826136.000000 s hg38.chr21_KI270874v1_alt 46393 403 + 166743 AACTGACtgacagagcaggagcatcatcatcttggacaagtccctcattctaaagttcaccttaat---aaaaaccacctaaatccaaagggtatcagcctaatggctaaggtcagcatgaccataaaccacaaataacatctccaaccagaaacattccaaactcctccacaaccagggacatgctagccccgagataaacaccactccag------------------------------------gccagaaggatgtctgccccaagataacctcccctcctcgcaaagagattccaaccctgtcataaacttcccca-acacataaatattccaagttgtaataagccccccctccctaagaccaatatatactcttagtctgtaagagaaaactctcctgactgatatcagccaggagtgcctctcaggttttaact s panTro5.chr21 3670914 403 + 33445071 AACTGACtgacagagcaggagcatcatcatcttggacaagtccctcattctaaagttcaccttaat---aaaaaccacctaaatccaaagggtatcagcctaatggctaaggtcagcatgaccataaaccacaaataacatctccaaccagaaacattccaaactcctccacaaccagggacatgctagccctgagataaacaccactccag------------------------------------gccagaaggatgtctgccccaagataacctcccctcctcgcaaagagattccaaccctgccataaacttctcca-acacataaatattcgaagttgtaataagctccccctccctaagaccaatatatactcttagtctgtaagagaaaactctcctgactgatatcagccaggagtgcctctcaggttttaact i panTro5.chr21 C 0 C 0 s panPan2.chr21 17297831 403 + 46275980 AACTGACtgacagagcaggagcatcatcatcttggacaagtccctcattctaaagttcaccttaat---aaaaaccacctaaatccaaagggtatcagcctaatggctaaggtcagcatgaccataaaccacaaataacatctccaaccagaaacattccaaactcctccacaaccagggacatgctagccccgagataaacaccactccag------------------------------------gccagaaggatgtctgccccaagataacctcccctcctcgcaaagagattccaaccctgccataaacttctcca-acacataaatattcgaagttgtaataagccccccctccctaagaccaatatatactcttagtctgtaagagaaaactctcctgactgatatcagccaggagtgcctctcaggttttaact i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3236888 403 - 13858734 AACTGACtgacagagcaggagcatcaccgtcttggacaagtccctcattctaaagttcaccttaat---aaaaaccacctaaatctaaagggtatcagcctaatggctaaggtcagcatgaccataaaccacaaataacatctccaaccagaaacattccaaactcctccacaaccagggacatgctagccccgagataaaccccactccag------------------------------------gccagaaggatgtctgccccaagataacctcccctcctcgcaaagagattccaaccctgccataaacttctcca-acacataaatattccaagttgtaataagccccccctccctaagaccaatatatactcttagtctgtaagagaaaactctcctgactgaaatcagccaggagtgcatctcaggttttaact i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419086 403 + 32716333 AACTGACtgacagagcaggagcatcaccatcttggacaagtctctcattctaaagttccccttaat---aaaaaccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaccataaaccacaaataacatctctaaccagaaacatcccaaactcctccacagccagggacatgctagtcccgagataaaccccactccag------------------------------------gccagaaggctgtctgccccaagataacctcccctcctcacaaagagattccaaccccgccataaacttttcca-acacataaacattccaagttgtaataagcccccccaccctaagaccaatatatactcttagtctgtaagagaaagctctcctgactgaaatcggccaggagtgcctctcaggttttaact i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155373824 402 - 185818997 AAGTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaatataaaccacaaataacatctccaaccagaaacatgccaaactcctccacaaccagggacatgctagccccaaggtaaatcccactccag------------------------------------gccagaaggatgcctgccccaagacaaccc-ccctcctcccagagagattccaaccccgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaaatcggccagcagcgcctctcaggttttaact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196509 402 - 192294377 AAGTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaatataaaccacaaataacatctccaaccagaaacatgccaaactcctccacaaccagggacatgctagccccaaggtaaatcccactccag------------------------------------gccagaaggatgcctgccccaagacaaccc-ccctcctcccagagagattccaaccccgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaaatcggccagcagcgcctctcaggttttaact i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674531 402 + 9440265 AAGTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaatataaaccacaaataacatctccaaccagaaacatgccaaactcctccacaaccagggacatgctagccccaagataaatcccactccag------------------------------------gccagaaggatgcctgccccaagacaaccc-ccctcctcccagagagattccaaccccgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaaatcggccagcagcgcctctcaggttttaact i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405540 402 + 21915920 AAGTGACtgacagagcaggagcatcatcctcttggacaagtccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatgactaaggtcagcatgaatataaaccacaaataacatctccaaccagaaacttgccaaactcctctacaaccagggacatgctagccccaagataaatcccactccag------------------------------------gccagaaggatgcctgccccaagacaacct-ccctcctcccagagagattccaaccctgccataaacttctcca-acacataaacattccaggttgtaataagccctctcaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaaattggccagcagcgcctctcaggttttaact i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14981985 402 - 90373283 AAGTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaatacaaaccacaaataacatctccaaccagaaacatgctaaacatctccacaaccagggacatgctagccccgagataaatcccactccag------------------------------------gccagaaggatgcctgccccaagacaagct-ccctcctcccagagagattccaaccccgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaactcagccagcagcgcctctcaggttttaact i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2149617 402 + 4234846 AAGTGACtgacagagcaggagcatcatcatcttggacaagcccctcattctgaagttcaccttaac---agaagccacctaaatccaaagggcatcagcctaatggctaaggtcagcatgaatataaaccacaaataacatctccaaccagaaacttgccaaactcctccacaaccagggacatgctagccccaagataaatcccactccag------------------------------------gccagaaggatgcctgccccaagacaacct-ccctcctcccagagagattccaaccctgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagtctgtacgagaaagcgctcctgactgaaatcggccagcagcgcctctcaggttttaact i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156248 402 - 13750039 AAGTGACtgacagagcaggagcatcaccatcttggacaagtccctcattctgaagttcaccttaat---agaagccacctaaatccaaagggcatcagcctaatgactaaggtcagcatgaacataaaccacaaataacatctccaaccagaaacatgccaaactcctccacaaccagggacatgctagccccgagatagatcccactccag------------------------------------gccagaaggatgcctgccccaagacaatct-ccctcctcccagagagattccaaccctgccataaacttctcca-acacataaacattccaggttgtaataagccctcccaccctaaaaccaatatatactcttagactgtaagagaaagcactcctgactgaaatcggccagcagcgcctctcaggttttaact i colAng1.NW_012120598v1 C 0 I 1 s calJac3.chr21 21909815 443 + 50472720 AACTGACtgacagagcaggagcgtcaccatcttggacaagtccatcattctaaaattcaccttattttaaatgaccacctaagtccaaagggcatcagcctaatggccaaggtcagtatgaccataaaccacaagaaacatctccaatcagaaacattccaaactcctcctcaaccagagacatgctaaccccaaaataaagccccctccagctaggaagctgctagccccaagataaccccctccaaagtggaaggatgtctgccccaagacaacatcccctcctcctcgagagattccaaccctgccataaacttctccacacctataaacattccaagttgtaataagccccctcaccctaaaactaatttatactctcagtctgtaagagaaagtgctcctgaccaaaattggccagtggcacctctcaggttttaact i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5017701 441 + 13128814 AACTGACtgacagagcaggagcgtcaccaccttggacaagtccatcattctaaaattccccttaattaaaataaccaccta--tccaaagagcatcagcctaatggccaaggtcagtatgaccataaaccacaagaaacatctccaatcagaaacattccaaactcctccccaaccagagacatgctagccccaaaataaacccccctccagccaggaagctgctagccccatgataaccccctccagggctgatggatgtctgccccaagacaacatcccctcctcctggagagattccaaccctgccataaatttctccacacctataaacattccaagttgtaataagccccctcatcctaaaaccaatttttactcttagtctgtaagaaaaagcactcctgaccaaaatcggccagtggcacctctcaggttttaact i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9594012 440 - 14377064 AACTGACtgacagagcaggagcatcac---cttggacaagtccatcattctaaaattcaccttaattaaaataaccacctaagtccaaacggcatcagcctaatggtcaaggtcagtatgaccataaaccacaagaaacatctccaatcagaaacatgccaaactcctccccaaccagagacatgctagccccaaaataaacccccctccagccaggaagctgctagccccgagataaccccttccagggcggaaggatgtctgcctcaagacaacatcccctcctcctcgagagattccaaccctgccataaacttttccacacctataaacattccaagttgtaataagtcccctcaccctaaaaccaatttatactcttagtctgtaagagaaagtgctcctgaccaaaatcggccagcggcacctctcaggttttaact i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730298 443 + 9889416 AACTGACtgacagagcaggagcatcaccatcttggacaagtccatcattctaaaattcaccttaattaaaataaccacctaagtccaaagggcatcagcctaatggccaaggtcagtatgaccataaaccacaagaaacatctccaatcagaaacatttcaaactcctccccaaccagagacatgctagccccaaaataaacctccctccagccaggaagctgctagccctgagagaaccctctccagggcggaaggatgtctgccccaagacaacatcccctcctcctcgagagattccaaccctgccataaacttatccacaactataaacattccaagttgtaataagccccctcaccctaaaaccaatttatactctttgtctgtaagagaaagcgctcctgaccaaaatcggccagcggcacctctcaagttttaact i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=7802.000000 s hg38.chr21_KI270874v1_alt 46796 5 + 166743 aaaga s panTro5.chr21 3671317 5 + 33445071 aaaga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298234 5 + 46275980 aaaga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237291 5 - 13858734 aaaga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419489 5 + 32716333 aaaga i nomLeu3.chr25 C 0 C 0 s colAng1.NW_012120598v1 156651 4 - 13750039 aaag- i colAng1.NW_012120598v1 I 1 C 0 s cebCap1.NW_016107322v1 9594452 4 - 14377064 -aaga i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730741 4 + 9889416 -aaga i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e saiBol1.JH378168 5018142 0 + 13128814 C e calJac3.chr21 21910258 0 + 50472720 C e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e cerAty1.NW_012002954v1 8405942 0 + 21915920 C e macNem1.NW_012019910v1 8674933 0 + 9440265 C e manLeu1.NW_012102865v1 2150019 0 + 4234846 C e chlSab2.chr2 14982387 0 - 90373283 C e macFas5.chr3 162196911 0 - 192294377 C e rheMac8.chr3 155374226 0 - 185818997 C a score=21045.000000 s hg38.chr21_KI270874v1_alt 46801 11 + 166743 aaacctgtctt s panTro5.chr21 3671322 11 + 33445071 aaacctgtctt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298239 11 + 46275980 aaacctgtctt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237296 11 - 13858734 aaacctgtctt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419494 11 + 32716333 aaacctgcctt i nomLeu3.chr25 C 0 C 0 s cebCap1.NW_016107322v1 9594456 11 - 14377064 aaacctgtctt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730745 11 + 9889416 aaacctgtctt i aotNan1.NW_018487195v1 C 0 I 32 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e saiBol1.JH378168 5018142 0 + 13128814 C e calJac3.chr21 21910258 0 + 50472720 C e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e colAng1.NW_012120598v1 156655 0 - 13750039 C e cerAty1.NW_012002954v1 8405942 0 + 21915920 C e macNem1.NW_012019910v1 8674933 0 + 9440265 C e manLeu1.NW_012102865v1 2150019 0 + 4234846 C e chlSab2.chr2 14982387 0 - 90373283 C e macFas5.chr3 162196911 0 - 192294377 C e rheMac8.chr3 155374226 0 - 185818997 C a score=1365.000000 s hg38.chr21_KI270874v1_alt 46812 1 + 166743 A s panTro5.chr21 3671333 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298250 1 + 46275980 A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237307 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419505 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s cebCap1.NW_016107322v1 9594467 1 - 14377064 a i cebCap1.NW_016107322v1 C 0 I 31 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e saiBol1.JH378168 5018142 0 + 13128814 C e calJac3.chr21 21910258 0 + 50472720 C e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e colAng1.NW_012120598v1 156655 0 - 13750039 C e cerAty1.NW_012002954v1 8405942 0 + 21915920 C e macNem1.NW_012019910v1 8674933 0 + 9440265 C e manLeu1.NW_012102865v1 2150019 0 + 4234846 C e chlSab2.chr2 14982387 0 - 90373283 C e macFas5.chr3 162196911 0 - 192294377 C e rheMac8.chr3 155374226 0 - 185818997 C a score=408262.000000 s hg38.chr21_KI270874v1_alt 46813 454 + 166743 gtgttctcattgctcaattcccacctatgagtgagaacatgcggtggttggttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcttccacatccttacaaagtaaatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccaaaataaaggacataggatggggaacatcacacaccggga-ctgtcgtagggtcgggggaggcgggagggatagcattaggagatatacctaatgtaaatgatgagttaatgggtgcatcacaccaacatggcacatgtatacatatgtaacaaacctgcatgttgtgcatacgtaccctagaacttaaagtataatttaaaaaaaggaa s panTro5.chr21 3671334 454 + 33445071 gtgttctcattgctcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcttccacatccttacaaagtacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccacaataaaggacataggatggggaacatcacacaccagga-ctgtcgtagggtcgggggaggcgggagggatagcattaggagatatacctgatgtaaatgatgagttaatgggtgcatcacaccaacatggcacatgtatacatatgtaacaaacctgcatgttgtgcatacgtaccctagaacttaaagtataatttaaaaaaaggaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298251 454 + 46275980 gtgttctcattgctcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcttccacatccttacaaagtacatgaactcatccttttttatggctgcatagtattccatggtgtacatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccacaataaaggacataggatggggaacatcacacaccggga-ctgtcgtagggtcgggggaggcgggagggatagcattaggagatatacctgatgtaaatgatgagttaatgggtgcatcacaccaacatggcacatgtatacatatgtaacaaacctgcatgttgtgcatacgtaccctagaacttaaagtataatttaaaaaaaggaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237308 454 - 13858734 gtgttctcattgctcaattcccacctatgagtgagaacatgcggtgtttggttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcttccacatccttacaaagtacacgaactcatccttttttaaggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccacagtaaaggacatagaatggggaacatcacacactggga-ctgtcgtggggaggggggaggcaggagggatagcattaggagatatacctaatgtaaatgatgagttaatgggtgcatcacaccaacatggcacatgtatacatatgtaacaaacctgcatgttgtgcatatgtaccctagaacttaaagtataattttaaaaaaagaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419506 455 + 32716333 gtgttctcattgctcaattcccacctatgagtgagaacatgcagtgtttggttttctgtccttgtgatagtttgctcagaatgatggtttccagcttcatccatgtccttacaaagtacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacacttgggttggttccaagtctttgctattgtgaatagtgccacaataaaggacttgggatggggaacatcacacaccggggcctgtcatggggtggggggaggcgggagggatagcattaggagatatacctaatgtaaatgacgagttaatgggtgcagcacaccaacatggcacatgtatacatatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataatttaaaaaaaagaa i nomLeu3.chr25 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e cebCap1.NW_016107322v1 9594468 31 - 14377064 I e saiBol1.JH378168 5018142 0 + 13128814 C e calJac3.chr21 21910258 0 + 50472720 C e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e colAng1.NW_012120598v1 156655 0 - 13750039 C e cerAty1.NW_012002954v1 8405942 0 + 21915920 C e macNem1.NW_012019910v1 8674933 0 + 9440265 C e manLeu1.NW_012102865v1 2150019 0 + 4234846 C e chlSab2.chr2 14982387 0 - 90373283 C e macFas5.chr3 162196911 0 - 192294377 C e rheMac8.chr3 155374226 0 - 185818997 C a score=5005.000000 s hg38.chr21_KI270874v1_alt 47267 1 + 166743 a s panTro5.chr21 3671788 1 + 33445071 a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298705 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237762 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419961 1 + 32716333 a i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374226 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196911 1 - 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674933 1 + 9440265 a i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405942 1 + 21915920 a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982387 1 - 90373283 a i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150019 1 + 4234846 a i manLeu1.NW_012102865v1 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e cebCap1.NW_016107322v1 9594468 31 - 14377064 I e saiBol1.JH378168 5018142 0 + 13128814 C e calJac3.chr21 21910258 0 + 50472720 C e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e colAng1.NW_012120598v1 156655 0 - 13750039 C a score=24105.000000 s hg38.chr21_KI270874v1_alt 47268 4 + 166743 aAGA s panTro5.chr21 3671789 4 + 33445071 aAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298706 4 + 46275980 aAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237763 4 - 13858734 aaGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419962 4 + 32716333 aAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374227 4 - 185818997 aagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196912 4 - 192294377 aagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674934 4 + 9440265 aagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405943 4 + 21915920 aagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982388 4 - 90373283 aagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150020 4 + 4234846 aagg i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21910258 4 + 50472720 aaga i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5018142 4 + 13128814 aaga i saiBol1.JH378168 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e cebCap1.NW_016107322v1 9594468 31 - 14377064 I e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I e colAng1.NW_012120598v1 156655 0 - 13750039 C a score=402140.000000 s hg38.chr21_KI270874v1_alt 47272 58 + 166743 aaacctgtctttaactgccagccacatttcatgtttctttcctctttctttaactctt s panTro5.chr21 3671793 58 + 33445071 aaacctgtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298710 58 + 46275980 aaacctgtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237767 58 - 13858734 aaacctgtctttaactgccagccgcatttcatgtttctttcctctttctttaactctt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4419966 58 + 32716333 aaacctgtctttaactgccagccgcatttcatgtttctttcctctttctttaactctt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374231 58 - 185818997 aaaccagtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196916 58 - 192294377 aaaccagtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674938 58 + 9440265 aaaccagtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8405947 58 + 21915920 aaaccagtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982392 58 - 90373283 aaacctgtctttaactgccagccgcatttcatgtttccttcctctttctttaactctt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150024 58 + 4234846 aaaccagtctttaactgccagccacatttcatgtttctttcctctttctttaactctt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156655 58 - 13750039 aaacctgtctttaacagccagccacatttcatgtttctttcctctttctttaactctt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21910262 43 + 50472720 aaatctgtccttaactgccagccacactttgtgttgctttcct--------------- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5018146 43 + 13128814 aaacctgtctttaaccgccagccatgctttgtgttgctttcct--------------- i saiBol1.JH378168 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e cebCap1.NW_016107322v1 9594468 31 - 14377064 I e canFam3.chr31 13794536 0 + 39895921 C e mm10.chr16 78096641 555 + 98207768 I a score=7098.000000 s hg38.chr21_KI270874v1_alt 47330 1 + 166743 a s panTro5.chr21 3671851 1 + 33445071 a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298768 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237825 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420024 1 + 32716333 a i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374289 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196974 1 - 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674996 1 + 9440265 a i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406005 1 + 21915920 a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982450 1 - 90373283 a i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150082 1 + 4234846 a i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156713 1 - 13750039 a i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13794536 1 + 39895921 A i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e dasNov3.JH568778 3566131 0 - 6883506 C e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e cebCap1.NW_016107322v1 9594468 31 - 14377064 I e saiBol1.JH378168 5018189 0 + 13128814 C e calJac3.chr21 21910305 0 + 50472720 C e mm10.chr16 78096641 555 + 98207768 I a score=20749.000000 s hg38.chr21_KI270874v1_alt 47331 4 + 166743 AACT s panTro5.chr21 3671852 4 + 33445071 AACT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298769 4 + 46275980 AACT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237826 4 - 13858734 AACT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420025 4 + 32716333 AACT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374290 4 - 185818997 AACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196975 4 - 192294377 AACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8674997 4 + 9440265 AACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406006 4 + 21915920 AACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982451 4 - 90373283 AACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150083 4 + 4234846 AACT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156714 1 - 13750039 A--- i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13794537 4 + 39895921 AATT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566131 4 - 6883506 GACT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e micMur3.chr31 19166882 58 + 47401472 I e otoGar3.GL873528 20728861 0 - 38779656 C e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e cebCap1.NW_016107322v1 9594468 31 - 14377064 I e saiBol1.JH378168 5018189 0 + 13128814 C e calJac3.chr21 21910305 0 + 50472720 C e mm10.chr16 78096641 555 + 98207768 I a score=10500.000000 s hg38.chr21_KI270874v1_alt 47335 1 + 166743 G s panTro5.chr21 3671856 1 + 33445071 G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298773 1 + 46275980 G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237830 1 - 13858734 G i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420029 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374294 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196979 1 - 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675001 1 + 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406010 1 + 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982455 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150087 1 + 4234846 G i manLeu1.NW_012102865v1 C 0 C 0 s otoGar3.GL873528 20728861 1 - 38779656 G i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78097196 1 + 98207768 G i mm10.chr16 I 555 C 0 s canFam3.chr31 13794541 1 + 39895921 G i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566135 1 - 6883506 G i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1049066 58 + 2694913 I e micMur3.chr31 19166882 58 + 47401472 I e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e cebCap1.NW_016107322v1 9594468 31 - 14377064 I e saiBol1.JH378168 5018189 0 + 13128814 C e calJac3.chr21 21910305 0 + 50472720 C e colAng1.NW_012120598v1 156715 0 - 13750039 C a score=13923.000000 s hg38.chr21_KI270874v1_alt 47336 1 + 166743 A s panTro5.chr21 3671857 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298774 1 + 46275980 A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237831 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420030 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374295 1 - 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196980 1 - 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675002 1 + 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406011 1 + 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982456 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150088 1 + 4234846 A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156715 1 - 13750039 A i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19166940 1 + 47401472 A i micMur3.chr31 I 58 C 0 s proCoq1.NW_012144079v1 1049124 1 + 2694913 A i proCoq1.NW_012144079v1 I 58 C 0 s otoGar3.GL873528 20728862 1 - 38779656 A i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78097197 1 + 98207768 A i mm10.chr16 C 0 C 0 s canFam3.chr31 13794542 1 + 39895921 A i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566136 1 - 6883506 A i dasNov3.JH568778 C 0 C 0 e aotNan1.NW_018487195v1 8730756 32 + 9889416 I e cebCap1.NW_016107322v1 9594468 31 - 14377064 I e saiBol1.JH378168 5018189 0 + 13128814 C e calJac3.chr21 21910305 0 + 50472720 C a score=2117078.000000 s hg38.chr21_KI270874v1_alt 47337 138 + 166743 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAAAGAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGATAGTGGGAAGTAGGGA s panTro5.chr21 3671858 138 + 33445071 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAAAGAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGATAGTGGGAAGTGGGGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298775 138 + 46275980 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAAAGAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGATAGTGGGAAGTGGGGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237832 138 - 13858734 CTATGTTCAATCATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAGTGTTAAATTTGTAAGACAAAGAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGATAGTGGGAAGTGGGGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420031 138 + 32716333 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAAAGAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGATAGTGGGAAGTGGGGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374296 138 - 185818997 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAACAAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGGTAATGGGAAGTGGGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162196981 138 - 192294377 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAACAAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGGTAGTGGGAAGTGGGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675003 138 + 9440265 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAACAAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGGTAGTGGGAAGTGGGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406012 138 + 21915920 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATTCAGTTGATGTTTCCTGAATGTTAAATTTGTAAGACAACAAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGGTAGTGGGAAGTGGGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982457 138 - 90373283 CTATATTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ACCCAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAACAAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGATAGTGGGAAGTGGGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150089 138 + 4234846 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATACAGTTGATGTTTTCTGAATGTTAAATTTGTAAGACAACAAGT----TCTACAATTCTATGGAAC-------A--GGGATATGAAAGGTAGTGGGAAGTGGGGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156716 138 - 13750039 CTATGTTCAATAATAAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGATGTTTCCTGAATGTTAAATTTGTAAGACAACAAGT----TCTACAATTCTATGGAAC-------A--CGGATATGAAAGGTAGTGGGAAGTGGGGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21910305 142 + 50472720 cAATGTTCAGTAATCAAGTCAATAAACAGGTCAAAAAATATAAAC------ATCCAGTTGATGTTTTCCGAATATTAAATTTGTAAGACAAAGAGC----TCTACAGTTCTATGGAACAGGG---A--GGGATATGAAAGACAGCGGGAAGTGGGGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5018189 142 + 13128814 ctATGTTCAGTAATCAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTTATGTTTTCTGAATATTGAATTTGTAAGACAAAGAGT----TCTACAATTCTATGGAACAGGG---A--GGGATATGAAAGACAGTGGGAAGTGGGGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9594499 142 - 14377064 ctATGTTCAGTAATCAAGTCAATAAACAGGTCAAATAATATAAAC------ATCCAGTTGACGTTTTCTGAATATTGAATTTGTAAGACAAAGAGT----TCTACAATTCTATGGAACAGGG---A--GGGATATGAAAGACAGTGGGAAGTGGGGA i cebCap1.NW_016107322v1 I 31 C 0 s aotNan1.NW_018487195v1 8730788 142 + 9889416 ctATGTTCAGTAATCAAGTCAATAAACATTTCAAATAATATAAAC------ATCCAGTTGATGTTTTCTGAATATTAAATTTGTAAGACAAAGAGT----TCTACAATTCTATGGAACAGGG---A--GGGATATGAAAGATAGTGGGAAGTGGGGA i aotNan1.NW_018487195v1 I 32 C 0 s micMur3.chr31 19166941 144 + 47401472 CTATGTTCAATAATTAAGTCAATCAACAAGTCAAATAATATAAACTGAACTGTCCTATCAATGTTTCCTAAATGTTAAACTGGTAAGGCATAGAGT----TCTACAATTTTACAGAAG-------A--GAGATAAAAAAGATAGTGGGAAGTGGGGA i micMur3.chr31 C 0 I 39 s proCoq1.NW_012144079v1 1049125 144 + 2694913 CTATGTTCAATAATTAAGTCAATCAATAGGTCAAATAATGTAAACTGAACCGTCCAATCAATGTTTCCCAAATGTTAATTTGGTAAGGCATAGAGT----TGTACAATTTTACAGAAG-------A--GAGATAAGAAAGATAGTGGGAAGTGGGGA i proCoq1.NW_012144079v1 C 0 I 18 s otoGar3.GL873528 20728863 148 - 38779656 CTGTGTTCAATAATTAAATCAGTCGACAGGTCAAATAATAAAACCTGAACTGTTGAAACAATGTTTTCCAAATGTTAAATTGGTAAGGCATAGAGTCCCATCTATAGTTCTACATAAC-------C--GCGATGAGAAAGTCAGTGGGAAGTGGGGA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78097198 141 + 98207768 ATATGAGCAGTGATCAAATCAAT----AGGTGAGATCACACCAACTCAGTTGTCCAAGTGATACCTTCTAAATGTGAAGCTTGTAAGGCACAGATG----TCAACAGTTCTATGGATC-------ATCTAGGAAAGAAACACAAGGAGAAGAGGAA- i mm10.chr16 C 0 I 2 s canFam3.chr31 13794543 149 + 39895921 TTATGTTCAATAATCAAGGCAATCAACAGGTCAAGTAGTATAAACTGAGTTGTCCAATTAATGTTTTCCAAATATAAAACTTAAAGGGCACAGATT----TCTACAATTCTATAGAACAGAGAACA--GAAATATGAAAAGC--TGGTAAGAGGGGA i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3566137 141 - 6883506 TAATGTTCATTAAATCTATCAAACAATAGGTCAAATAGTATAAACTGAATTTTCCAATCACTGTTT--CAAACATTAAATTTAGAAGGCACACATT----TCTACAATACTGCAGAAC-------A--GAGATAAGAAAGGTGGTGGGAAGTGGGA- i dasNov3.JH568778 C 0 C 0 a score=157995.000000 s hg38.chr21_KI270874v1_alt 47475 32 + 166743 --GAACA-TCAAAGATTCAAATGTTCATAGGTCTG s panTro5.chr21 3671996 32 + 33445071 --GAACA-TCAAAGATTCAAATGTTCATAGGTCTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298913 32 + 46275980 --GAACA-TCAAAGATTCAAATGTTCATAGGTCTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3237970 32 - 13858734 --GAACA-TCAAAGATTCAAATGTTCTTCAGTCTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420169 32 + 32716333 --GAACA-TCAAAGATTCAAATATTCATAGGTCTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374434 25 - 185818997 --GAACATTCAAAGATTCAAATCTTCA-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162197119 25 - 192294377 --GAACATTCAAAGATTCAAATCTTCA-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675141 25 + 9440265 --GAACATTCAAAGATTCAAATCTTCA-------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406150 25 + 21915920 --GAACATTCAAAGATTCAAATCTTCG-------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982595 25 - 90373283 --GAACATTCAAAGATTCAAATCTTCA-------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150227 25 + 4234846 --GAACATTCAAAGATTCAAATCTTCA-------- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156854 25 - 13750039 --GAACATTCAAAGATTCAAATCTTCA-------- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21910447 25 + 50472720 --GAACATTCAAATAGTCAAATGTTTA-------- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5018331 25 + 13128814 --GAACATTCAAACGGTCAAATGTGTA-------- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9594641 25 - 14377064 --GAACATTCAAATAGTCAAATGTTTG-------- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730930 25 + 9889416 --GAACCTTCAAATAGTCAAATATTTA-------- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20729011 24 - 38779656 --GGACACTCAGATGTTCCTCGGCTT--------- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78097341 25 + 98207768 --AAGCCTTCAGGTGCCTACAGCCCTG-------- i mm10.chr16 I 2 C 0 s canFam3.chr31 13794693 19 + 39895921 --GGGCACTCAAATATTCACA-------------- i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3566278 20 - 6883506 GAAGACATTCAAATATTCAT--------------- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1049269 18 + 2694913 I e micMur3.chr31 19167085 39 + 47401472 I a score=344861.000000 s hg38.chr21_KI270874v1_alt 47507 25 + 166743 TAGGTCTTTGTCAGATATTTATGAC s panTro5.chr21 3672028 25 + 33445071 TAGGTCTTTGTCAGATATTTATGAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298945 25 + 46275980 TAGGTCTTTGTCAGATATTGATGAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3238002 25 - 13858734 TAGGTCTTTGCCAGATATTTATGAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420201 25 + 32716333 TAGGTCTTTGCCAGATATTTATGAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374459 25 - 185818997 TAGGTCTTTGCCAGATATTTATGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162197144 25 - 192294377 TAGGTCTTTGCCAGATATTTATGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675166 25 + 9440265 TAGGTCTTTGCCAGATATTTGTGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406175 25 + 21915920 TAGGTCTTTGCCAGATATTTACGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982620 25 - 90373283 TAGGTCTTTGCCAGATATTTACGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150252 25 + 4234846 TAGGTCTTTGCCAGATATTTACGAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156879 25 - 13750039 TAGGTCTTTGCCAGATATTTACAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21910472 25 + 50472720 TAGGTCTTTGCCAGATATTTATGAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5018356 25 + 13128814 TAGGTCTTTGCCAGGTATTTATGCC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9594666 25 - 14377064 TAGGTCTTTGCCAGATATTTACAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730955 25 + 9889416 TAGGTCTTTGCCAGATATTTATGAC i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1049287 25 + 2694913 TAGGCCTTTGCCAGATATTTATTAG i proCoq1.NW_012144079v1 I 18 C 0 s otoGar3.GL873528 20729035 18 - 38779656 -------TGGCCAGGGATTTATGGC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78097366 17 + 98207768 --------GTCCAGATATCGATTAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13794712 22 + 39895921 -AGGTC--TGCCAGATATTTATTAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566298 22 - 6883506 ---GTCTTTACTAGATATTTACTAC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19167085 39 + 47401472 I a score=3261608.000000 s hg38.chr21_KI270874v1_alt 47532 223 + 166743 ATGTT-------CTCAGGACACTGAACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagatcacc-aaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaaaaccagatatgattagcttatacagttagttggaga-tatgggatttgaatgcaggtttcttgattcat s panTro5.chr21 3672053 223 + 33445071 ATGTT-------CTCAGGACACTGAACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagatcacc-aaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaaaaccagatatgattagcttatacagttagttggaga-tatgtgatttgaatgcaggtttcttgattcat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17298970 223 + 46275980 ATGTT-------CTCAGGACACTGAACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagatcacc-aaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaaaaccagatatgattagcttatacagttagttggaga-tatgtgatttgaatgcaggtttcttgattcat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3238027 223 - 13858734 ATGTT-------CTCAGGACACTGAACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagaccacc-aaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaaaaccagatatgattagcttatacagttagttggaga-tatgggatttgaatgcaggtttcttgattcat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420226 223 + 32716333 ATGTT-------CTCAGGACATGGGACAAGAGCCAGTGT-TTGAGTTCTTAGAATAAAGCAAATCCAAAAACATTAG-TTTtcagagcttcaatagaccttagagatcacc-aaaccaaactcctaattttatgaactag-aaaactgcagtgctaaga-aaagcaaaaccagatatgattagcttatacagttagttggaga-tatgggatttgaatgcaggtttcttgattcat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374484 224 - 185818997 ATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TTGAGTTCTTAGAATAAATCACATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggaga-tgggggatttgaatgcaggtttcttgatgcat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162197169 224 - 192294377 ATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TTGAGTTCTTAGAATAAATCACATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggaga-tgggggatttgaatgcaggtttcttgaTGCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675191 224 + 9440265 ATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TTGAGTTCTTAGAATAAATCACATCCaaaaacattaa-ttttcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggaga-tgggggatttgaatgcaggtttcttgatgcat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406200 224 + 21915920 ATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TTGAGTTCTTAGAATAAATCACATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggaga-tgggggatttgaaggcaggtttcttgaTGCAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982645 224 - 90373283 ATGTT-------CTCAGGACACCGAACAACAGCGAGTGT-TCGAGTTCTTAGAATAAATCACATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggaga-tgggggatttgaatgcaggtttcttgaGGCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150277 224 + 4234846 ATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TTGAGTTCTTAGAATAAATCACATCCAAAAACATTAG-TTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggaaa-tgggggatttgaaggcaggtttcttgaTGCAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 156904 221 - 13750039 ATGTT-------CTCAGGACACTGAACAACAGCAAGTGT-TCGAGTTCTTAGAATAAATCACATCCAAAAAC---AG-TTTtcagagcttgaatagaccttagagatcatcaaaaccaaactccttattttatgaactag-aaaactgcagtgctaaga-aaaacaataccagatatgattagcttatacagttagttggaga-tgggggatttgaatgcaggtttcttgatgcat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21910497 220 + 50472720 ATGTT-------CTCAGGACACTGAATAAGAGCAAGTGT-TTGAGTTCTTAGAATAAAACAAATGCaaaatcattag-ttttcagaacttgaagagaccttagagatcatcaaaaccaaactccttgttttatgaactag-aaaactgcagtgataag-----aaaaaaatatatatgattagccaatgccattagtaggaga-taaggtatttgaatgcaggtttcttgattcac i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5018381 224 + 13128814 ATGTT-------CTCAGGACACTGAATAAGAGCAAGTGT-TTGAGTTCTTAGAATAAAACAAATGCaaaatcattag-ttttcagagcttgaagagaccttagagatcatcaaaaccaaactccttgttttatgaactag-aaaactgcagtgctaag--aaaaaaaaaacaggtatgattagccgatgctgtgagttggagattaaggtatttgaatgcaggtttcttgattcat i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9594691 225 - 14377064 ATGTT-------CTCAGGACACTGAATAAGAGCAAGTGT-TTGAGTTCTTAGAATAAAATAAATacaaaatcattag-ttttcagagcttgaagagaccttagagatcatcaaaaccaaactccttgttttatgaactag-aaaactgcagtgctaaga-aaaaaaaaaacagatatgattagccaatgctgttagttggagattaagggatttaaatgcaggtttcttgattcat i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8730980 223 + 9889416 ATGTT-------CTCAGGACACTGAATAAGAGCAAGTGT-TTGAGTTCTTAGAATAAAACAAATGCaaaatcatttg-ttttcagaacttgaagagaccttagagatcatcaaaaccaaactccttgttttatgaactag-aaaactgcagtgctaag--aaaaaaaaaccagatatgattagccgatgctgttagttggaga-taaggtatttgaatgcaggtttcttgattcat i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19167124 222 + 47401472 ATGTT-------CTCAGTACACTGAAGAAGAACAGGTGT-TTCAATTCTTTGAATAAAGCaaacatgaaaatattga-tttccagagcttgaatagaccttagagatcatcaaaaccaatctccttattttatggtcgca-aaaactacagtactaagg-aaaaaa--aatagatatgattaacttatatagtcagttggaga-tacgggatttgaatacaggtttcttgattcat i micMur3.chr31 I 39 C 0 s proCoq1.NW_012144079v1 1049312 224 + 2694913 ATGTT-------GTCAGTACACTGAAGAAGAGCAGGTGT-TTCGATTCTTAGAATAAAGCaaacataaaaatattga-tttccagaatttgaatagaccttagagatcatcaaaaccaatctccttattttatggccttg-aaaactgcagtggtatgg-aaaaaaagaacagatatgattaacttatacagttagttggaga-taagggatttgaatacaggtttcttgattcAT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20729053 222 - 38779656 ATGTT-------CTCAGCACGCTGGGGAAGGGCAGGTGT-TTCCATTCTTAGAATAAAGCaaacatagaaatattga-tttccagagtttgaagagacctcaaagataatcaaaaccgatcttcttatgttatcatctagaaaaactgcagggctgagg-aaaaaa--cttagatatggttaatatttatagttag-tagaaa-tttgggatttgaatacagctttctttttttgt i otoGar3.GL873528 C 0 I 122 s mm10.chr16 78097383 204 + 98207768 -ACTT-------CTCTGTACCCTGAATAAGAATGAACATCTTCCTTTCCTAGAGTAAGCCGAACACAGAACCATGGATTTTTCAGAGCATGAAGAG----------------------AACTCCTATTTTGATAGAACAG-ACAACTGCTGGACAAAGGCGAGGTTGGAGAGGACATGATTCGTGTACAGAACTACGTGAAGG-TCAGGTACTCGCGTGCAGGATTTTTGGTTCAC i mm10.chr16 C 0 C 0 s canFam3.chr31 13794734 224 + 39895921 ATATTTCTTATATTCAGTACACTGAGATGGCACAGGTGT-TTCAGTTCTTAGAATAAAGCAAACATACAAACCACTA-TTTtcagagtttgaggagaccttaggaatcacccaaaccaacctccatattatacaggctac-aaaagtgcagtgctaaga-agaaaa----cagatatgactagctcatacagttagctgcaga-tgtgggaattgaatgcatgt---ttgattcat i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566320 218 - 6883506 --------TTAACTCAGTACATTGAGAAAGTACAAGTGT-TTCAGTTCTCTGAATAAAGGAGATatagaaacatcaa-ttctcagagctgaaagatgacttagagatcatctaagccaa-cttgttattttatagacaag-agaactgcaatgccaaga-agaaaa----cagatctgattaggtcacatagttagttgcagt-tataggacttgaatgcaggtttctcaattcat i dasNov3.JH568778 C 0 C 0 a score=73213.000000 s hg38.chr21_KI270874v1_alt 47755 4 + 166743 ggac s panTro5.chr21 3672276 4 + 33445071 ggac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17299193 4 + 46275980 ggac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3238250 4 - 13858734 ggac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420449 4 + 32716333 ggac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374708 4 - 185818997 ggac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162197393 4 - 192294377 GGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675415 4 + 9440265 ggac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406424 4 + 21915920 GGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982869 4 - 90373283 GGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150501 4 + 4234846 GGAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 157125 4 - 13750039 ggac i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21910717 4 + 50472720 gaac i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5018605 4 + 13128814 gaac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9594916 4 - 14377064 gaac i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8731203 4 + 9889416 gaac i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19167346 4 + 47401472 ggac i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1049536 4 + 2694913 GGAC i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20729397 4 - 38779656 ggac i otoGar3.GL873528 I 122 I 162 s mm10.chr16 78097587 4 + 98207768 AGAC i mm10.chr16 C 0 I 3 s canFam3.chr31 13794958 4 + 39895921 gggc i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566538 4 - 6883506 gggc i dasNov3.JH568778 C 0 C 0 a score=7579803.000000 s hg38.chr21_KI270874v1_alt 47759 559 + 166743 cagtcA--TTCTTTGGCAG-----TTTTAGTT-CTACCTCTTCAGAGCAACCAC--AAATTATTTGAGAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGCAATCTACAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTCGGCCTCTTAAGTTGTTCAGAGACAATCTCGGCACCATGAAATATGTTTTCTACTTAGTCTCATAGTA--TCCTCTTGATTTAATACTATGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAA-GACACCAAGGGTCA----------------CCGGCCAATGTTCCTCC-TACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTC----------------ATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTGCTTCTTTATATCTCTCTG---------CT---------CAAATACATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTTTTCCCTTTGCTCACCACAGGGACTCCACCTATTCATCCTAACC-AAAATATATGAACAAG-C s panTro5.chr21 3672280 559 + 33445071 cagtcA--TTCTTTGGCAG-----TTTTAGTT-CTACCTCTTCAGAGCAACCAC--AAATTATTTGAGAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGCAATCTACAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGGCACCATGAAATATGTTTTCTACTTAGTCTCATAGTA--TCCTCTTGATTTAATACTATGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAA-GACACCAAGGGTCA----------------CCGGGCAATGTTCCTCC-TACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTC----------------ATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTGCTTCTTTATATCTCTCTG---------CT---------CAAATACATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTTTTCCCTTTGCTCACCACAGGGACTCCACCTATTCATCCTAACC-AAAATATATGAACAAG-C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17299197 559 + 46275980 cagtcA--TTCTTTGGCAG-----TTTTAGTT-CTACCTCTTCAGAGCAACCAC--AAATTATTTGAGAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGCAATCTACAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGGCACCATGAAATATGTTTTCTACTTAGTCTCATAGTA--TCCTCTTGATTTAATACTATGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAA-GACACCAAGGGTCA----------------CCGGGCAATGTTCCTCC-TACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTC----------------ATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTGCTTCTTTATATCTCTCTG---------CT---------CAAATACATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTTCTCCCTTTGCTCACCACAGGGACTCCACCTATTCATCCTAACC-AAAATATATGAACAAG-C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3238254 559 - 13858734 cagtcA--TTCTTTGGCAG-----TTTTAGTT-CCACCTCTTCAGAGCAACCAC--AAATTATTTGAGAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGCAATCTACAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGGCACCAttaaatatgttttctacttagtctcatagta--tcctcttgatttaatactatggagataggttgaataTCTCA--AAAACATGAC--TTAAGAA-GACACCAAGGGTCA----------------CCGGGCAATGTTCTTCC-TACCGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTC----------------ATTCTGT-TCTTCTTTACTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTGCTTCTTTATATCTCTCTG---------CT---------CAAATATATACCAGAAACAATGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTTTTCCCTTTGCTCACCACACGGACTCCACCTATTCATCCTAACC-AAAATATATGAACAAG-C i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4420453 557 + 32716333 cagtcA----CTTTGGCAG-----TTTTAGTT-CTACCTCTTCAGAGCAACCAC--AAATTATTTGACAGAG-----------TTGTCCTGTCTTCTTTATCAATACAAAGTATGTAATCTATAGGTAAAATCCATTTAAGGAAA--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGGCACCATGAAATATATTTTCTACTTAGTCTTATAGTG--TCCTCTTGATTTAATACTATGGAGATAGATTGAATATCTCA--AAAACATGAC--TTAAGAA-GACACCAAGGGTCA----------------CCGGGCAATGTTCTTCC-CACAGAAACAAAGAATTCATTCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCCACTTTTT----------------ATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTGCTTCTTTACGTCTCTCTG---------CT---------CAAATATAAACCAGAAACGGTGGGACCAAGTCAGAGGTTTGAAGACTGAATTATTCTTTTCCCTTTGCTCACCACAGGGACTCCACCTATTC-TCCTAAAC-AAAATATATGAACAAG-C i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155374712 563 - 185818997 cagtca--ttctttGGTAG-----TTTTAGTT-CCACCTCTTCAGAGAAACCAC--AAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAAGAAGCTTTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGACTCCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCCTCTTGATTTAATACTGTGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTTC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAC----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TGTTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCTCTTTGCTTCTTTACATCTCTCTG---------CT---------CAAATATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-AATTCTTTTCCTTTTGCTCACCACAGTGACTCTACCTATTC-TCCTAACCCAGAATATATGAACAAG-C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162197397 563 - 192294377 CAGTCA--TTCTTTGGTAG-----TTTTAGTT-CCACCTCTTCAGAGAAACCAC--AAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAGGAAGCTTTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTTGACTCCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCCTCTTGATTTAATACTGTGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTTC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAC----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TGTTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCTCTTTGCTTCTTTACATCTCTCTG---------CT---------CAAATATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-AATTCTTTTCCTTTTGCTCACCACAGTGACTCTACCTATTC-TCCTAACCCAGAATATATGAACAAG-C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675419 545 + 9440265 cagtca--ttctttGGTAG-----TTTTAGTT-CCACCTCTTCAGAGAAACTAC--AAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAGGAAGCTTTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGACTCCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCCTCTTGATTTAATACTTTGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTTC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAC----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TGTTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCTCTT------------------TG---------CT---------CAAATATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-AATTCTTTTCCTTTTGCTCACCACAGTGACTCTACCTATTC-TCCTAACCCAGAATATATGAACAAG-C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406428 563 + 21915920 CAGTCA--TTCTTTGGTAG-----TTTTAGTT-CCACCTCTTCAGAGAAACCAC--AAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAACGAAGCTTTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGACTCCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCCTCTTGATTTAATACTGTGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTTC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAC----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCTCTTTGCTTCGTTACATCTTTCTG---------CT---------CAAATATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAAACTGAA-AAATCTTTTCCTCTTGCTCACCACAGTGACTCCACCTATTC-TCCTAACCCAGAATATATGAACAAG-C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14982873 559 - 90373283 CAGTCA--TTCTTTGGTAG-----TTTTAGTT-CCACCTCTTCAGAGAAACCAC--AAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAGGAAG--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGACTCCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCCTCTTGATTTAATACTGTGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTCC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTGCTTCTTTACATC--TCTG---------CT---------CAAACATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTTTTCCTTTTGCTCGCCACAGTGACTCCACCTATTC-TCCTAACCCAGAATATATGAACAAG-C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2150505 563 + 4234846 CAGTCA--TTCTTTGGTAG-----TTTTAGTT-CCACCTCTTCAGAGAAACCAC--AAATTATTTGAGAGAG-----------TTGTGCTGTCATCTCTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCTATTTAAGGAAGCTTTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTCGACTCCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCCTCTTGATTTAATACTGTGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAATGACAGCAAGGGTCA----------------CCAGGCAATGTCTTTTC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAC----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TATTCTGT-TCTTCTTTGCTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCGTCTTTGCTTCTTTACATCTTTCTG---------CT---------CAAATATACACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-AATTCTTTTCCTTTTGCTCACCACGGTGACTCCACCTATTC-TGCTAACCCAGAATATATGAACAAG-C i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 157129 561 - 13750039 cagtca--ttctttGGTAG-----TTTTAGTT-CCACCTCTTCAGAGAAACCAC--AAATTATTTGAGAGAG-----------TTGTCCTGTCATCTCTATCAATACAAAGTGTGCAATCTACAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTCAGCCTCTTAAGTTGTTCAGAGACAATCTTAACTCCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCCTCTTGATTTAATACTATGGAGATAGGTTGAATATCTCA--AAAACATGAC--TTAAGAATGACAGCAAGGGTCA----------------CCGGGCAATGTCTTTTC-CACAGAAACAAAGAATTCAATCTTATAGATAACTCAAGAGAAT----------------------------------------------------------------AGAATCTCCTCAT------------GATCATTCCC--TCCTACTTTTC---------------TATTCTGT-TCCTCTTTGCTTCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTGCTTCTTTACATCTCTCTG---------CT---------CAAATATATACCAGAAACATTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTATTTTCCTTTTGCTCACCACAGTGACTCCACCTATTC-TCCTAACCTAGAATAGATGAACAAG-C i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21910721 559 + 50472720 cagtcA--TTCTTTGGGAG-----TTTCAGTT-CTACCACTTCAGAGCAACCAC--AAATTATTT--GAGAG-----------TGGTTCTGTCTTCTTCATCAAT-CAAAGCGTGCAATCTATAGGTAAAGTCCATTTAAGGAAG--CTTAAATTACTCCTCTTGGCCTCCTAAGTTGTTCAGAGACAGTCTTGACACCATGAAACATATTTTCTAGTTAGTCTCATAGTA--TCTTCTTGAGTTAATACCATGGAGATAGGTTGAATATCTCAAGAAAACATGAC--TTAACAA-GACAGCAAGGGTCA----------------CTGGGCAATGTCCTTTC-CACAGAAACAAGTAATTCAGTCTTATAGATGACACCAGAGAAT----------------------------------------------------------------AGCATCTCCTCAT------------CATCATTCCC--TCCTCCATTTC---------------TATTCTGT-TCTTCTTTGCTGCTGTTA--------------------------AACTCGTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTCCTTCCTTATATCTCTCTG---------CT---------CAAATATATACCAGAAAGAGTGGGACCAAGTCAGAGGTGTGAAGACTAAG-TATTCCCTTCCCTCTGCTCACCACAGGGACACCACCTATTC-TCCTAACCCAAAATATATGAAGAAG-C i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5018609 561 + 13128814 cagtcA--TTCTTTGGAAG-----TTTTAGTT-CTACCACTTCAGAGCAACCAC--AAATTATTTGAGAGAG-----------TTGTTCTGTCTTCTTTATCAATATGAAGTGTGCAATCTGTAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTTGGCCTCCTGAGTTGTTCAGAGACAATCTTGGCATCATGAAATGTATTTTCTAGTTAGTCTCATAGTA--TCTTCTTGA-TTAATACTATGGAGATAGGTTGACTATCTCAAAAAAACATGAC--TTAACAA-GACAGCAAGGGTCA----------------CTGAGCAACGTCCTTTC-CACAGAAACAAGTAATTCAGTCTTATACATGACACCAGAGGAC----------------------------------------------------------------AGCATCTCCTCGT------------CATCATTCCC--TCCTACATTTC---------------TATTCTGC-TCTTCTTTGCTGCTGTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTTCTTCCTTACATCTCTCTG---------CT---------CAAATATATGCCAGAAAGAGTGGGACCAAGTCAGAGGTTTGAAGACTGCA-TGTTCTCTTCCCTCTGCTCACCACAGGGATGCCACCTATTC-TCCTAACCCAAAATATATGAAGAAG-C i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9594920 561 - 14377064 cagtcA--TTCTTTGGAAG-----TTTTAGTT-CTACCACTTCAGAGCAACCAC--AAATTATTTGAGAGAG-----------TTGTTCTGTCTTCTTTATCAATACGAAGTGCGCAATCTATAGGTAAAGTCCATTTAAGGAAG--CTTAAATTACTCCTCTTGGCCTCCTAAGTTGTTCAGAGACAATCTTGGCACCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCTTCTTGATTTAATACTATGGAGATAGGTTGAGTATCTCAA-AAAACATGAC--TTAACAA-GACAGCAAGTGTCA----------------CTGGGCAATGTCCTTTC-CACAGAAACAAGTAATTCAGTCTTATAGATGACACCAGAGAAT----------------------------------------------------------------AGCATCTCCTCAT------------CATCATTCAC--TCCTACATTTC---------------TATTCTGT-TCTTCTTTGCTGCTGTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTCCTTCCTTATATCTCTCTG---------CT---------CAAATATATACCAGAAAGAGTGGGACCAAGTCAGAGGTTTGAAGACTGAA-TATTCTCTTCCCTCTGCTCACCACAGGGATGCCACCTATTC-TCCTAACCCAAAATATATGAAGAAG-C i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8731207 562 + 9889416 cagtcA--TTCTTTGGAAG-----TTTTAGTT-CTACCACTTCAGAGCAACCAC--AAATTATTTGAGAGAG-----------TTGTTCTGTCTTCTTTATCAATACAAAGTGTGCAATCTATAGGTAAAGTCCATTTAAGGAAG--TTTAAATTACTCCTCTTGGCCTCCTAAGTTGTTCAGAGACAATCTTGACACCATGAAATATATTTTCTAGTTAGTCTCATAGTA--TCTTCTCGATTTAATACTATGGAGATAGGTTGAATATCTCAAAAAAACATGAC--TTAACAA-GACAGCAAGGGTCG----------------CTGAGCAATGTTCTTTC-TACAGAAACAGGTAATTCAGTCTTATAGATGACACCAGAGAAT----------------------------------------------------------------AGCATCTCCTCAT------------CATCATTCCT--TCCTACATTTC---------------TATTCTGT-TCTTCTTTGCTACTGTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTCCTTCCTTATGTCTCTCTG---------CT---------CAAATATATACCAGAAAGAGTGGGACCAAGTCAGAGGTTTGAAGATTGAA-TATTCTCTTCCCTCTGCTCACCACAGGGACACCACCTATTC-TCCTAACCCAAAATATATGAAGAAG-C i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19167350 559 + 47401472 cagtcG--TCCCTTGGCAG-----TTTTAGTT-CCACCTCCGCAGAGCAACTGCGAGAATTGTTTGAGAAAG-----------TTGTCCTACTTTCTTTATCAATACAAAGTGTACAACCTGTAGGTAAAGTCTACAAGTGGAAG--TAAAAATTACTCCTCTTGGCCTCCTAAATTGTTCAGACACAATCCCAGAATCATGAAACATATTATTTAGTTAGTCTCAGATAA--TCCTCTTGATTTAATACTATGGAGGTAAGTTGACTATCTCA--AAAACATGATTATTAAGAA-AACACCAAGGGTCA----------------CTGAGTAATGTCCTTTC-CTCAGAAACTGAGAACTCAACCTCATAGATGACTCAAGAGAAT----------------------------------------------------------------AG--TTGCCTCAT------------AATTATTTTC--TCTTATTTTTC---------------TGTTCTGT-TCATCTTTGCTGCTTTT---------------------------AACACCTT-----------------------------------------------------------------------------------------------TCCATTTCTCCTTTCCTTCTTTCTATCTCTCTG---------CT---------CAAATATATAACAGAAAGGATGGGACCACATT-GGGGGTAGAAGACTAAA-TATTCTTTGCCCTTTGCTCACTACAAGGACTTCA-CTGCTC-TCCCCACCCAAAATACACGAACAAG-C i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1049540 556 + 2694913 CAGTTG--TCCCTTGGCAG-----TTTTAGTT-TCACCTCTTCAGAGCAACTGC--AACTTGTTTGATAAAG-----------TTGTCCTACCTTCTTTATCAACACAAAGTATACAATCTATAGGTAAAATCCAC-AGTGGAAG--TAAAAATGACTCCACTTGGCCTCCTAAACTGCTCAGGCACAATCCCAGGATCATGAAATATATTTTTTAGTTAGTCTCAGATCA--TCCTCTTGGTTTAATACTATGGAGATAGGTTGGCTATCTCA--AAAACATGACTATTGAGAA-AACACCAAGGGTCA----------------CTGGGTAATGTCCTTTC-CTCAGAAACTGAGAACTCAACCTCATTGATGACTCAAGAGAAT----------------------------------------------------------------AG--TTTCCTCAT------------CATTACTTTC--TCTTATTTTTC---------------TGTTCTGT-TCCTCTTTGCTGCTTTT---------------------------GACTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCTTTCCTTCTTTCTATCTATCTG---------TT---------CAAATATAGAACAGAAAGGATGGGACCAATTC-GGGGGTAGAAGACTAAA-TATTCTTTTCCCTTTGTTCACTACAAGGACTCCA-CTGCTC-TCCCCACCCAAAATACATGAACAAG-C i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20729563 522 - 38779656 cagtca--tcctttgacag-----TATTAGTT-CAACCTCTTCAGAGCAACTGC-----------------------------------AACCTTCTTTACCAATACAAAACGTGCAACCAATAGGTAAAGTCTGTATGTGGAAG--TTTAAATTACTCCCTTTGGCCTCTTAAATT----AGACACAATCCCAGTG-CATGAAATGTATCTTTTAGTTAGTTTCAGTTAGTTTCCCCTTGGTTTAATACCATGGAGGTAGGTTGACTATCTCA--AAAACAGGACTATGGAGAA-AACACCAAGGGTC------------------------ATGTTTTTTT-CCTAGAAACCAAGAACTCAACCTCACAGATGACTTAAGAGAAT----------------------------------------------------------------AG--TTTCCTGAT------------CATTATTTTC--TCCTACTTTTC---------------CATTCCGT-TGATCTTTGCTGCTTTT---------------------------AATTCCTT-----------------------------------------------------------------------------------------------TCCATTTCCCCCTGCCTTCTTTCCATC--TCTG---------AT---------CAAATAGA-AGCAGAAAGGATGCAACCAAGTCAGGGGGCTGAAGACTGAA-TATGCTTTTCTCCTTGCTCACTACAAGGACTCCACCTGCTC-TCCCT-TCCAAAACACACGAATAAG-C i otoGar3.GL873528 I 162 C 0 s mm10.chr16 78097594 765 + 98207768 CATCCACTCTCTTTGGATT-----CCTCAGTT-GCAGTCCTTTAAAGCAACTGT--AAATTGTTTGTGAGTAAAAATTCACCCCTCTACTTTTTTTTTTAACTCCACAAAGTATGTG--CCACAGGGAAAGCTTGTAT---GAAG--TTTAACTTACTCCCCTTAGC--------------------------AGCAGTGTGAAATATATTTGC-AGTTGCCCTCAGACCA--TAA-CTTAATTTAATGATATAGAAGCACATTAGTGATTTTA--AAGACTTAAT--GCCTGA--GATGACAAGTATCCCGACATCTTCCTTCCTCCCAGTAATGTCCCTCCTCCCAGGAACCCAGAACTCCGCCTTATCAATGACTTACAAGTATCATTCTCTCTGTTTTTTGCTCTTTCTTGTTTCTCTTTGCTGCTTTTTAAAAAAAtttttattggatattttctttatttacatttcaaaagtcatcccctttcctggtttcccttccggaaatgccctattccatcccctccctgctgcttctatgagggtgctcacccacccaaccacccactccctcccacctccctgccctggcattcccctacactggggcatcaagtcttcacaggaccaagggtctctcctcccattgatggtctacaaggccatcctcCAATCCCCCTGGCTTTCCTTCTATTTTTCTG---------CT---------GAAATATACAAGACAAAGGATGGGACCAACTCAGGGATTTGGACAATGAA-CAAT-TGTTCCTTTTGTTTCCTCTGAGAATT-----TATTT-TCTCAGCCCCAAATACGTGAACAAG-A i mm10.chr16 I 3 C 0 s canFam3.chr31 13794962 548 + 39895921 cagttg--tccttttccag-----ttatacttccCATGTCTTCACGGCAACTGC--AAA----TTGAGAAAT-----------CTATCCT----TTTTTAAAAACACAAAGCACGCAAACTATAAGTACAGCCCAGATGAGGAAG--TTTAAGTTACTCCTTTTGACTTTCTAAATCGTTCCAATATAACCCTAGCACCATGAAATCTGTTCTCCTGTTAGTCTCAGATAA--TTCCCTAAATTTAATACTATGAAGCTAGGTTAAC--TCTCA--AAAACATGACACATTGGAA-GAC------GAACA----------------CTGAATAATGTCCTTTA-CCTAGAAACCAACAACTCAACACTATAGATGATTCAAGAGAAT---------------------------------------------------------------AAGAGTTGCTTCAC------------CATTATTCCC--TCATATATTTC---------------TCTTATGT-TCCTCTTTGCTGTTTTTA--------------------------AATTCCTT-----------------------------------------------------------------------------------------------TACATTTCCCCTTGCCTTATTTCCATCTCTCTGGTCAAAAAATT---------CAAATATACAGCAGAGAGAGTAGGACCAAATT----------CAATTGAA-TATTCTATCCCCTTTGCTCCTTACAAAGACCCTCCCTTTTG-TCCCCATACAAAGTATATGGAAAAGTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3566542 458 - 6883506 cagtcA--ACCTTTGGCAGTTCAATTCTAATT-TCACCTCTTCAGAACAATGGC--AAATAGTTTAAGAAAG-----------CTGTCCCATTTTCCTTAACAATGTAAAG----CAACCTATGGATAAAGTTTGTACAAGGAAG--TTAAAATTACTCCTCTTGACCCACTCAATTGCTCAGAGACAGCCCCATTACCATAAAATATATTTTCTAATTACTATCAAATCA--TTTCCTTGATTCAATATT-TGGAGATAGTCTGAAT-TGTCT-----------C--TTGAGAA-GACAGCAAGGGCCC----------------CTAGGTAAAGCTATTTC-TCCAGAAACCAAGAACCCAGGCTTATAGATGACTCAGAATAAT----------------------------------------------------------------ACCATTTCCTGAT------------CATTCATCTC--TCCTCATTTTT---------------TCTTCTGT-TCCTCTGTTTTGCTTTTA--------------------------AACTCCTT-----------------------------------------------------------------------------------------------TCCATTTACCCTTGCCTACTTTCCATCTCCTTG---------CTCATAAAACCCAAATATAGAGCAGAC-------------------------------------------------------------------------------------------------------- i dasNov3.JH568778 C 0 C 0 a score=1860055.000000 s hg38.chr21_KI270874v1_alt 48318 134 + 166743 TGCAACTCACTGCCTACTTTCTATTAGTTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGCAA-TGGG s panTro5.chr21 3672839 134 + 33445071 TGCAACTCACTGCCTACTTTCTATTAGTTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGCAA-TGGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17299756 134 + 46275980 TGCAACTCACTGCCTACTTTCTATTAGTTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCCTGTGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGCAA-TGGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3238813 134 - 13858734 TGCAACTCACTGCCTACTTTCTATTAGTTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGCAA-TGGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4421010 134 + 32716333 TGCAACTCACTGCCTACTTTCTATTAGTTCCATTCTCATTTGTTTTAAGGCCTCGGAATATTGCATATGGATAACAACA-TAAAAAGTAATAAGTCCTCTCACAATTCCTTGTGAAATAAAAATCTAGCAA-TGGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155375275 134 - 185818997 TGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCCTTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAA-GGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162197960 135 - 192294377 TGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCCTTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAAGGGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8675964 134 + 9440265 TGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCCTTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAA-GGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8406991 134 + 21915920 TGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCCTTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGGAATAAGTCCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAA-GGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14983432 134 - 90373283 TACAACTCACTGCCTACTCTCTATTAGTTCCATTTTCATTTGTTTTAAGGCCTCAGAATATTGCGTATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAGTCCCTTGTGAAATAAAAATCTAGCAA-GGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2151068 134 + 4234846 TGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCCTTTGTTTTAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGGAATAAGTCCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAA-GGAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 157690 134 - 13750039 TGCAACTCACTGCCTACTCTCTATTAGTTCCATTCTCATTTGTTTCAAGGCCTCGGAATATTGCATATGGATAATAACA-TAAAAAGTAATAAGTCCTCTCACAGTTCCTTGTGAAATAAAAATCTAGCAA-GGAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21911280 135 + 50472720 TGAAATTCACTGCCTGCTTTTTACTAGTTCCATTCTCATTTACTTTAAGGCCTCAGCATATTGCATATGGATAACAACATTAAAAAGTAATAAGTCCTCTTACAATTCCTTGTAAAATAAAAATCTAGCAA-CGGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5019170 135 + 13128814 CGAAATTCACTGCCTGCTTTCTACTAGTTCCATTCTCATTTCTTTTAAGGCCTCAGCATATTGCATAGGGATAATAACATTAAAAAGTAATAAGTCATCTTACAATTCCTTATAAAATAAAAATCTAGCAA-TGGG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9595481 135 - 14377064 TGAAATTCACTGCCTGCTTTCTACTAGTTCCATTCTCATTTATTTTAAGGCCTCAGTATATTGCATATGGATAATAACATTAAAAAGTAATAAGTCCCCTTACAATTCCTTGTAAAATAAAAACCTAGCAA-TGGG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8731769 135 + 9889416 TGAAATTCACTACCTGCTTTTTACTAGTTCCATTCTCATTTATTTTAAGGCCTCAGCATATTGCATATGGATAATAACATTAAAAAGTAATAAGTTCTCTTACAATTCCTTGTAAAATAAAAATCTAGCAA-TGGG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19167909 135 + 47401472 TACAACTCACTGCCTGCTTTCTATTAGTTCCATTCTCACTTATTTTAAGATCTCAGCACAGTGCACATAGGTAACAACATAAAATAGCAATAAGTCCTCTCACAATTCCTCATGAAATAAAAATCTAGCAA-TGGG i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1050096 134 + 2694913 TACAACTCACTGCCTGCCTTGTATTGGTTCCATTCTCATTTATTTTAAGATCTTAGCACATTGCACACAGGTAACAACATAAAATAGCAATAAGT-CTCTCACAACTCCTCATGAAATAAAAATCTAGCAA-TAAG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20730085 111 - 38779656 TACAACTCACTGCTTGCCTCCTATTAGTTCCATTCTCATTTATTTTAAGATACCAGCACATT------------------------GCAATATGTCCTTTCACAATGCCTCACAAAATAAAAATACAGCAA-AGAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78098359 131 + 98207768 CACAAATC-CTTCCTGTTTTCTATTAGAGCCATCCTCATTTATTTCAATCTCTCCACAGACTGTATAGACAGGAGAACA--AATGGCTAATACATTCTCTCACAATTTCT-GTGTTTGAAACATTCAGCAG-TGGG i mm10.chr16 C 0 C 0 s canFam3.chr31 13795510 117 + 39895921 TTTCACTTACTGCCTATTTTCCATTACTTCAGTCCTCATGTATTTTAAGCTCTTGGTTTTTTGTATATAGAT----ACA--------------GTACTCTCACAATTTTTCATAAAATAAAAATCTAGCAA-TGGG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3567000 0 - 6883506 C a score=17386266.000000 s hg38.chr21_KI270874v1_alt 48452 1009 + 166743 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATCTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCACCCAAAATCTATAACACACCATGTAATACATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGA-TTTATTGCTTAGTATCCCAGTAGTTCCTCAGTCTTTC-----TTTGTCGAAGCTCAACCAGC--CAGTATTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTACCCTTC--AAAAAATCCATAGGCTA-AT-TTTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATT-AAATGGTATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAATGAA------------ACTT-TTTGTTA-CTCTTTCAATTGCAC--------------ATAAAAATTACTCTTTTTCTCTTTGTCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGGAAGGTTAAAA--CTTAACTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGCTGCAAGATGCAAA-ATTTAAAGTGATAGA s panTro5.chr21 3672973 1010 + 33445071 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATCTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACACACCATGTAATACATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCCCTCAGAGA-TTTATTGCTTAGTATCCCAGTAGTTCCTCAGTCTTTC-----TTTGTCGAAGCTCAACCAGC--CAATATTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTACCCTTC--AAAAAATCCATAGGCTA-AT-TTTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATT-AAATGGCATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAATGAA------------ACTT-TTTGTTA-CTCTTTCAATTGCAC--------------ATAAAAATTACTCTTTTTCTCTTTGGCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGGAAGGTTAAAA--CTTAACTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTAGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGCTGCAAGATGCAAA-ATTTAAAGTGATAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17299890 1002 + 46275980 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATCTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACACACCATGTAATACATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCCCTCAGAGA-TTTATTGCTTAGTATCCCAGTAGTTCCTCAGTCTTTC-----TTTGTCGAAGCTCAACCAGC--CAGTATTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTACCCTTC--AAAAAATCCATAGGCTA-A--TTTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATT-AAATGGCATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAATGAA------------ACTT-TTTGTTA-CTCTTTCAATTGCAC--------------ATAAAAA-------TTTTCTCTTTGGCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGGAAGGTTAAAA--CTTAACTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGCTGCAAGATGCAAA-ATTTAAAGTGATAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3238947 1010 - 13858734 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATGGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATCTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACACACCATGTAATACATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGGCCAC-TCAGAGA-TTTATTGCTTAGTATCCCACTAGTTCCTCAGTCTTTC-----TTTGTCGAAGCTCAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTACCCTTC--AAAAAATCCATAGGCTA-ATATTTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATT-AAATGGCATAAACAGTCTT------------GGATA-------TTCATAGAT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT--GAATGGTCA----TGGT-----TAT--------ACAATGAA------------ACTT-TTTGTTA-CTGTTTCAATTGCAC--------------ATAAAAATTACTCTTTTTCTTTATGGCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGAAATGTTAAAA--CTTAACTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGCTGCAAGATGCGAA-ATTTAAAGTGATAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4421144 1013 + 32716333 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGCTGGATTTCATCCAAAATCTATAACTCGCCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAACACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGA-TTTATTGCTTAGTATCCCACTAGTTCCTCAGTCTTTC-----TTTGTCAAAGCTCAATCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTACCCTTC-AAAAAAATCCATAGGCTA-ATATTTTTTTATTTTTATTGCTAATTGTTCCTAATTCTTC----AACATT-AAATGACATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT--GAATGGTCA----TGGT-----TGTA------CACAATGAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------ATAAAAATTACTCTTTTTCTTTATGGCTATCTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGAAATGTTAAAA--CTTAAGTTA-----CTTTAAAATTCGGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAAGATGTGAA-ATTTAAAGTGATAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155375409 1009 - 185818997 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGA-TGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTC-----TTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTC-AAAAAAATCCATAGGCTA-AT-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATT-AAATGACATACACTGTCTT------------GGATA-------TTCATAGCT-AAAATAATTGCAGACAA-TCTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAAAGAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTTTATGGCTATGTACCTCAAAATTCTTTGTTTCAAGTATAC---ACATAAGTCGTTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGAAATGTT-AAA--CTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAAGATGTGAA-ATTTAAAGTGATAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162198095 1010 - 192294377 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCGGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCTCCC-TCAGAGA-TGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTC-----TTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTCAAAAAAAATCCATAGGCTA-AT-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATT-AAATGACATACACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAGTGCAGACAA-TCTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAAAGAA------------ACTT-TTTACTA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTTTATGGCTATGTACCTCAAAATTCTTTGTTTCAAGTATAC---ACATAAGTCGTTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGAAATGTT-AAA--CTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAAGATGTGAA-ATTTAAAGTGATAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8676098 1009 + 9440265 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGTCCCC-TCAGAGA-TGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTC-----TTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTC-AAAAAAATCCATAGGCTA-AT-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATT-AAATGACATACACTGTCTT------------GGATA-------TTCATAGCT-AAAATAATTGCAGACAA-TCTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAAAGAA------------ACTT-TTTATGA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTTTATGGCTATGTACCTCAAAATTCTTTGTTTCAAGTATAC---ACATAAGTCGTTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGAAATGTT-CAA--CTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAAGATGTGAA-ATTTAAAGTGATAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8407125 1008 + 21915920 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAACGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGA-TGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTC-----TTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTC-AAAAAAATCCATAGGCTA-AT-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATT-AAATGACATACACTGTCTT------------GGATA-------TTCATAGCT-AAAATAATTGCAGACAA-TCTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAAAGAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTTTATGGCTATGTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATAAGACATTAGTGAAAGCAAAATGGGTAC---TTTT----ATCTAAGAAATGTT-AAA--CTAAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAAGATGTGAA-ATTTAAAGTGATAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14983566 1009 - 90373283 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGACCCC-TCAGAGA-TGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTC-----TTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTC-AAAAAAATCCATAGGCTC-AT-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATT-AAATGACATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAATTGCAGACAA-TCTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAATGAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTTTATGGCTATGTACCTCAAAATTCTTTGTTTCAAGTATAC---AAATAAGTCATTAGTGAAAGCAATATGGGTACT--TTTT----ATCTAAGAAATGTT-AAA--CTAAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAAGATGTGAA-ATTTAAAGTGATAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2151202 1009 + 4234846 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAACGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACGCTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGGCCCCC-TCAGAGA-TGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTC-----TTTGTCAAAGCTTAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAATTGCCCTTC-AAAAAAATCCATAGGCTA-AT-TTTTTTTATTTTTATTGCTAATTCTTCCTAATTCTTC----AACATT-AAATGACATACACTGTCTT------------GGATA-------TTCATGGCT-AAAATAATTGCAGACAA-TCTTACAATTTCCTT--GAATGGTCA----TGGT-----TGT--------ACAAAGAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTTTATGGCTATGTACTTCAAAATTCTTTGTTTCAAGTATAC---AAATAAGTCATTAGTGAAAGCAAAATGGGTACT--TTTT----ATCTAAGAAATGTT-AAA--CTAAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAAGATGTGAA-ATTTAAAGTGATAGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 157824 1007 - 13750039 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTGTTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTCAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGG-CCCC-TCAGAGA-TGTATTGCTTAGTATCCCACTAGTTCCTCAGCCTTTC-----TTTGTCAAAGCTCAACCAGC--CAGTATTTTACCAAGTAGATTTTGTTGCCCTTTGTTTCTGTTTAGAGTTCCTTAAAAGTTGCCCTTC-AAAAAAATCCATAGGCT--AT-ATTTTTTATTTTTATTACAAATTCTTCCTAATTCTTC----AACATT-AAATGACATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAATTGCAGACAA-TCTTACAATTTCTTT--GAATGGTCA----TGGT-----TGT--------ACAATGAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTGTATGGCTATATACCTCAAAATTCTTTATTTCAAGTATAC---AAATGAGTCATTAGTGAAAGCAAAATGAGTACT--TTTT----ATCTAAGAAATGTT-AAA--CTTAAGTTA-----CTTTAAAATTCGGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAAGATGTGAA-ATTTAAAGTGATAGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21911415 1006 + 50472720 GGTGGGGAGGATTGACAGTCTAA---------------------------------------------------------CTACTATAATAGCAGTATT----T-TGTT----------TTTTATTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTGAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAGAAAAATACAGGTATGAATATGAAAGAGGCCCCC-TCTGAGA-TTTATTGCTTAGTATCCCATTAGTTCCTCAGTCTTTC-----TTTGTCAAAGCTCAACCAGC--CAGTGTTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATCATTCTTC---AAAAATCCATAGGTGA--T-TTTTTTTATTTTTATTGCTAATTATTCCTAATTCTTC----AGCATT-AAATAACATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT--AAATGGTCA----TGGT-----TGT--------ACAATAAA------------ACTT-TTAATTA-CTCTTTCAATTGCAC--------------GCAAAAATTATTCTTTTTCTTTATGCTTATCTACCTCCAAATTCTTTTTCTCAAGTATAT---AAATGAGTCATTAGAGAAAGAAAAATTGGTACT--TTTT--AAATCTAAGAAATATTAAAA--GTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTTCTCTGAGAAATTGGCCACCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCACTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAACATGCAAA-ATTTAAAGTGATAGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5019305 1006 + 13128814 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTATTTTAAACAAACTGCGGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCCTATGAAAGTATTTGAGTTGGATATCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAGAAAAATACAGGTATGAATATGAAAGAGGCCCCC-TCTGAGA-GTTATTGCTTAGTATCCCATTAGTTCCTCAGTCTTTC-----TTTGTCAAAGCTCAGTCAGC--CAGTGTTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATCATTCTCC--AAAAAATCCATAGGCta----tttttttatttttattactaattattCCTAATTCTT-------CATT-AAATGACATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT--AAATGGTCA----TGGT-----TGT--------ACAATAAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTTTATGCTTATCTACCTCCAAATTCTTTGTTTCAAGTATAT---AAATGAGTCATTAGAGAAAGAAAAATGGGTACT--TTTT--AAATCCAAAAAATATTAAAA--TTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTTCTCTGAG-AATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCACTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATCGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAACATGCAAA-ATTTAAAGTGATAGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9595616 1013 - 14377064 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTATTTTAAACAAACTGCAGTTTGGA-ATACCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTGAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAGAAAAATACAGGTATGAATATGAAGGAGGCCCCC-TCTGAGA-TTGATTGCTTAGTATCCCATTAGTTCCTCAGTCTTTC-----TTTGTCAAAGCTCAGCCAGC--CAGTGTTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATCATTCTTC--AAAAAGTCCATAGGCTATTT-TTTTTTCATTTTTATTGCTAATTATTCCTAATTCTTC----AGCATT-AAATGACATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAATGCAGACAA-TTTTACAATTTCCTT--AAATGGTCA----TGGT-----TGT--------ACAATAAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------AGAAAAATTATTCTTTTTCTTTATGCTTATCTACCTCCAAATTCTTTGTTTCGAGTATAT---AAATGAGTCATTAGAGAAAGAAAAATGGGTACT--TTTT--AAATCTAAGAAATATTAAAA--TTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTTCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCACTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGAGT-AGTTGTAACATGCAAA-ATTTAAAGTGATAGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8731904 1010 + 9889416 GGTGGGGAGGATTGACAGTCTAA-----------------------------------------------------TCATCTATTATAATAGCAGTATT----T-TGTT----------TTTTATTTTAAACAAACTGCAGTTTGGA-ATAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTGAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAATTTTGACACTTATTTTGCCAGAAAAATACAGGTATGAATATGAAAGAGGCCCCC-TCTGAGA-TTTATTGCTTAGTATCCCATTAGTTCCTCAGTCTTTC-----TTTGTCAAAGCTCAACCAGC--CAGTGTTTTACCAAGCAGATTTTGTTGCCCTTTGTTTCTGTTTAGATTTCCTTAAAAATTATTCTTC--AAAAAATCCATAGGCTA----TTTTTTTATTTTTATTGCTAATTATTCCTAATTCTTC----AGCATT-AAATGACATAAACTGTCTT------------GGATA-------TTCATAGCT-AAAATAAATTCAGACAA-TTTTACAATTTCCTT--AAATGGTCA----TGGT-----TGT--------ACAATAAA------------ACTT-TTTATTA-CTCTTTCAATTGCAC--------------ATAAAAATTATTCTTTTTCTTTACGCTTATCTACCTCCAAATTCTTTGTTTCAAGTATAT---AAATGAGTCATTAGAGAAAGAAAAATGAGTATT--TTTT--AAATCTAAGAAATATTAAAA--TTTAAGTTA-----CTTTAAAATTCAGCATTTTCTGGGTTAAATTAGAACACTACTTCAATATCTGCAATTCAAATAAGTTCTCTGAGAAATTGGCCTCCATAACTAGTGACGTGCTGCTGAACTGAACAGATCTCTAAAATATCCTAACAGATTTCTTTCTTTCACTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCTCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAGCTTAACTGAGT-AGTTGTAACACACAAA-ATTTAAAGTGATAGA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19168044 1010 + 47401472 GGTGAGGAGGATTGACATCCTGA-----------------------------------------------------TCATCTATTATAATAGTGGAATT----T-TGTT----------TTTTATTTTAAACAAACTGCAGTTTGGA-AAAGCAATGTGTTTTGTTTATCACGTCAAGTTCTTATGAAAGTATTTGAGTTGGATTTCGTCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAAGTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGA-G-CCCC-TCTGAGA-TTTATTGCTTAGTATCCCACTAGTTTCCCAGTCTTTTTTTTGTGTGTCAAAGCTCAACCATG--CATTATTTTACCAAGAAGATTTTGTTGCCCTTTGTTTCTGTTCAGATTCACTTAAAAATCACCCTTT--GAAAAACC-ATAGGCTA-TT----------TTTAATTGCTAATTATTCCTAACCCTTC----AACATTAAAATGCCATAAACTTTCCT------------GAATAAAAGATTTTCATAGCA-AAAATAAATGTAGTCAA-TTGTACAGTTCCCTTA-AAATGGTTA----TAAT-----TGT--------ACAGTGAA------------A----TTTATTA-TTCTTTCAATTTTAC--------------ATAAAAATCATTCTTTCTCTTGATGCTTATCTGCCTCAAAATTCTTTGCTTCAGGTATGT---AAAAGAGACATTAGTGAAAGTAAAATGAGTACT--TTTT---AAATTAAGAAATATTAAAA--TTTAAATAA-----CTCTAAAATTCAGCATTTTCTGGGTTAAATTAGTACACTACTTCAGTATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCCCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAACTGAGGATTAAAATTCTGAACTTAACAGTGTAAGCTGTAAGATGCAAA-ATTTAAAGTGATAGA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1050230 1009 + 2694913 GGTGAGGAGGATTGACATTCTGA-----------------------------------------------------TCATCTATTATAATAGTAGAATT----T-TGTT----------TTTTATTTTAAACAAACTGCAGTTTGGA-AAAGCAATGTGTTTTGTTTATCACGTCAAGTTCTTATGAAAGTATTTGAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAAGTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATGAAAGAGG-CCCC-TCTGAGA-TTTATTGCTTAGTATCCCACTAGTTCCCCAGTCTTTTTTTT-TTTGTCAAATCTCAACCATG--CATTATTTTGCCAAGAAGATTTTGTTGCCCTTTGTTTCTGTTCAGTTTCACTTAAAAATCACCCTTT--GAAAAGCC-ATAGGCTA-TT----------TTTAATTCTTAGTTATTCCTAATCCTTC----TACATT-AAATGCCATAAACTGTCCC------------GCATAAAAGATTTTCAAAGCA-AAAATAAATGTGGACAA-TTGTACAATTCCTTTA-AAACGGTTA----TAAT-----CAT--------ACAGTGAA------------A----TTTATTA-TTCTTTCAATTTTAC--------------ATAAAAATCACTCTTTTCCTTGATGCTTATCTGCCTCAAAATTCTTTGTTTCGGGTATGT---AAAAGAGTCATTAATGAAAGCAAAATGGGGACT--TTTT---AAATTAAGAAATATTAAAA--TTTAAATAA-----CTCTAAAATTCAGCATTTTCTGGGTTAAATTAGTGCACTACTTCAGTATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGTTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCCCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAACTGAGGATTAAAATTCTGAACTTAACTGTGTAAACTGTAAGATGCAAA-ATTTAAAGTGATAGA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20730196 1009 - 38779656 AGTAAGGAGAATTGACATTCTGA-----------------------------------------------------TTATCTCTTATAATACTAGAATT----T-TGTTGGTTTTTTTATTTTATTTTAAACAAACGGCAATTTGGA-AAAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTACGAGAGTATTTGAGTTGGATTTCATCCAAAATCTATAACTCACCATGTAATGCATAATTTTGCTGTCATATGGTTGCAAAGTTTGACACTTATTTTGCCAG-AAAATACAGGTATGAATATAAAATAGGCCCCC-TCTGTGA-TTTATTGCTCAGTATCCCACTAGTACCCCAGTCTTTT-----CTTGTCAAAGTTCAACCATG--CATTATTTTACCTAGAAGATTTTGTTGGCCTTTATTTCTGTTCAGATTCTCTTAAAAATCACCCTTT--GAAAAACCTATAGGCTA-TC---------GTTTAATTACTAATTATTCC-AATCCTTC----AACATT-AAATACCATAAACTATCCT------------GCATAAAAGATTTTCATAGCA-AAAGTAAATGTAGACAA-TTCTACAATTCCCTTA-AAATGGTCA----TAAC-----TGT--------ACAGTAAA------------ATGTCTTTATTATTTTTTTCAATATCAC--------------TTAAAAATCA--CTTTCTCTTCATGCTTAGCTGCCTCAAAATTCTTTGTATCAGGCATAT---AAAAGAGTCATTAGTGAAAGTA----------C--TTTT---TAACTAAAAAAAATGACAA--TTTAAATAA-----CTCTAAAATTCAGCATTTTCTGGGTTAAATGAGTGCACTACTTCAGTATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCCTAACCAATGACGCGCTGCTGAACTGAACAGATCTCCAAAATATCCGAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCCCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTCTGAACTTAACTGGGT-AGCTGTAAAATGCAAA-ATTTAAAGTGATAGA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78098490 1064 + 98207768 AGAGAGGAAGGTGGACAGCCTGA-----------------------------------------------------CAGTCTCTCTTAATAATAGTATTACTGT-TGTT-TTCCTTTCATTTTATCTTTGAGACACTGAAGCCTGGACATGTTAGTGT-TTTTGTTTATCACGTCAAGTTCTTACCAAAGCATCCGAGCTGGAGTTCATCCAACATCTCTAACTCACCATGTAATGCATAATTTTTCTGTCAGACAGTTGCAAATTTTGACACTTACTTTGCCAG-AAAACACAGGTATGGATATGAAAGCGCCCCCC-TCTGAGA-TTTACAGCTTCGTCTCTCACTGGTTCCCCAGTTATCT-----ATTGTCAAAACCCTGCCACCTTCCGCATATTCCCAAGCAAATTTCATTACCCTTTGTTTCTGTTCAAATTTGCTTGAAA-TCGCCCATT--GAAAAGCTTCCATGGTG-AG-CTTGTTTA-----ATTGTTAATTTATTCTAATCTGTCAAAAAAAATG-AAATGCCATAAACTGCCCCCACCCCGACAAAGGAGT-------TTCACAACA-AACACACCTGCCAATAA-TCGTACAGTTCTCTT--AAATTGGAA----TCGTAGACGTGA--------ACAGTAGATATTAAGACCATAATT-TTTCTCA-TTTATCCAACTTGAT--------------CTACACAGCACTACTTCTCTTTATACTTGCCTGACTTGATGTTCTTTGTTTCAGGTATATAAAAAACGAGTTACTCACAAAGACAAAAGGTGAATT--TTTTTAAAACTAAGGAAATATTAAAATTCTTAATTCAGATATATCTGAAATTCAGCATATCCTGAGTT-AATTCGTGCACTACTTGAGTATCTGCAATTCAAATAAGTCATCGGAGAAATTGGCC-CCATAACCAGTGACGGGCTGCTTAACTGAACAGCTCTCCAAACTATCCTAACAGATTTCTTTCTTTCTTTGTAGAATTATTTCCATCTGGTGCTTCAATATTAAACCTGGAATATGGAAAGGCTCTCCCCTCTCACCCTATTTGACTTCGAAATCCTGGCAAAGAATTTGCATGGTCAATGAATTGAGCGTTAAAATGTTGAACTTAACTGTGT-AGTTGTAAGATGAAACTTTTTAAAGCAGTAAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13795627 1021 + 39895921 GGTGAAAAGCATTGATATTCTGA-----------------------------------------------------TCATCtattataatagtaatatt----tgtttt----------ttttattttaaaCAAGCTACAGTTTGGA-AAAGCAATGTGTTTTGTTTATCATGTCAAGTTCTTATGAAAGTATTTGAGTTGGATTTCATCCAAAATCTATAATTCACCATGTAATGCATAATTTTGCTGTCATATGGCTGCAAATTTTTACACTTATTTTGCCAG-AAAACACAGGTATGAATATGAAGGAGGCCCCC-TCAGAGA-TTTATTGCTTAATATCCCACTAGTTCCCTA------------GTCGTCAAAGCTCAACCATC--CATTAT-TTACCAAGTAGATTTTTCTGCCCTTTGTTTCAGCTCAGATTCACTTAAAAATCTCCCTTT--GAAAGATCCATAGGCTA-TT----------TGTAATTGTTAATTGTTTTGAGTCCTTC----AATATT-AAATCCCATAAACTGTTCT------------GGATG-AAGATTTTCATAGCAGAAAACAAACATAGATGATTTTTATAATTCCCTTA-AAATGGCCA----GAGC-----TGTAGCTATTAACAGTAAA------------ACtt-tttatta-ttct---aattttattattattaaGTACAATAAAAATCACTCCTTCTCTTCCTGCTTATCTGCCTCAAAATTCTTTGTTTCAGGTATAC---AA--GAGTCATTACTGAAAGAAATACAGGTACT--GTTC--TGACCTAAAAACTATTAAAA--TTTAAATAA-----ATCCAAAATTCAGCATTTTCTGGGTTAAATTAGTGCACTACTTCAGTATCTGCAATTCAAATAAGTCCTCTGAGAAATTGGCCTCCATAACCAGTGACGTGCTGCTGAACTGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCATTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCCCTCTCACCCTGTTTGACTTCCAAATGCTGGCAAATAATTTGCATTGTCAATGAATTGAGGATTAAAATTTTGAACTTAACTGTGT-AGTTGTAAAATGTACA-ATTTAAAGCGATAGA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3567000 1048 - 6883506 AGTGTGTGGGACCA--AGTCAAAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATCTATTATAATCATAGTATT----T-TATT-----------TTTATTTTAAAGAAATTTCAGTTTGGA-AAAGCAGTGTGTTTTATTTATCATGTCAAGTTCTTATGAAAGTATTTGAATTGGATTTTATCCAAACTCTGTAACTCACCATGTAATGCATAATTTCGCAGTCATATGGCTGCAAATTTTGACACTTATTTTGCCAG-AAAACACAGGTATGAATATGAAAAAGGCCCTC-TCTGAGATTTTACTGCTTAGTATCCAACTAGTTCCACAGTCTTTC-----ATTGTCAAAGCTAAAGCATC--CA-TAATTTACCAATCATGCTTTGTTACTCTTTGTTTCTGTTCAGGTTTATTTAAAAATCACCCCTT--GAATGACCAATAAGCTA-AC------------TTATT--TAATTATT--TAAACCTTC----AACATT-AAATACCATAAACTGACAT------------AGTTAAAAGGTTTTCATAGC--AAAATAAA---AGACAA-TTTTACAATTCCTTTATACATGGTCAAATGTAGA-----TAT------TGACAGTGAA------------ACTT-TTTATTA---CTTTCAATTTTAC--------------ATAAAGA----TCTCTCCCTTCATGCTTATTTATCTCAAAATT-TTTGTTTCAAGT-TAT---AAAAGACTCATTTATGACAGCAAAACAAGCACTGCATTT----ACCTAAAATCTGTTAAAA--CTTAAATAA-----TTCTAAAATTCAGCATTTTCTGGGTTAAATTAATACACTACTTCAGTATCTGCAATTCAAATCAGTCCTCTGAGAAATTGGCCTCTATACTCA-TGACGTGCTGCTGAACCGAACAGATCTCCAAAATATCCTAACAGATTTCTTTCTTTCTTTGTAGAATTGTTTCCATCTGGTGCTTAGATATTAAACCTGGAATATGTAAAGGCTCTCCCCTCTCACCCCATTTGACTTCCAAATGCTGGCAAATACTTTGCATTGTCAATGAATTGAGGACTAAAATTTTGAACTTAACTATGT-AGTTGTAGGATATAAA-ATTTGAAGAGATGta i dasNov3.JH568778 C 0 C 0 a score=669000.000000 s hg38.chr21_KI270874v1_alt 49461 48 + 166743 TCTTCAAAGTAGTGAATTTTTC--TCTTTTAATTTTGAGAAATGGAGACT s panTro5.chr21 3673983 48 + 33445071 TCTTCGAAGTAGTGAATTTTTC--TCTTTTAATTTTGAGAAATGGAGACT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17300892 48 + 46275980 TCTTCGAAGTAGTGAATTTTTC--TCTTTTAATTTTGAGAAATGGAGACT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3239957 50 - 13858734 TCTTCGAAGTAGTGAATTTTTCTTTTTTTTAATTTTGAGAAATGGAGACT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4422157 50 + 32716333 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155376418 46 - 185818997 TCTTCAAAGTAGTGAATT----TTTCTTTTAATTTTGAGAAATGGAGACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162199105 50 - 192294377 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8677107 50 + 9440265 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8408133 50 + 21915920 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14984575 50 - 90373283 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2152211 50 + 4234846 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 158831 50 - 13750039 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21912421 50 + 50472720 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5020311 45 + 13128814 TCTTCAAAGTAGTGAATTTTTC-----TTTAATTTTGAGAAATGGAGACT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9596629 46 - 14377064 TCTTCAAAGTAGTGAATTTTTC----TTTTCATTTTGAGAAATGGAGACT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8732914 50 + 9889416 TCTTCAAAGTAGTGAATTTTTCTTTCTTTTAATTTTGAGAAATGGAGACT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19169054 46 + 47401472 TCTTTAAAGTAGTATATAT----TTTTTTAAATTTTGAGGAATGAAGACT i micMur3.chr31 C 0 I 6 s proCoq1.NW_012144079v1 1051239 46 + 2694913 TCTTTAAAGTAGTGGTTTT----TTTTTTTAATTTTGAGAAATGAAGACT i proCoq1.NW_012144079v1 C 0 I 6 s otoGar3.GL873528 20731205 49 - 38779656 TATTCAAAGTAGCGGATTTTTC-TTTTTTTGATTTTGAGAAAGAGAGACT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78099554 30 + 98207768 TATCTAAAGAAGTGAGTTTCTT--------------------TATGGACT i mm10.chr16 C 0 I 2 s canFam3.chr31 13796648 44 + 39895921 TCTTTGAAGTAGTGGGGTTTTTTTTC------TTTTGAGAAATGGAGATT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3568048 0 - 6883506 C a score=164630.000000 s hg38.chr21_KI270874v1_alt 49509 14 + 166743 TGAAATGTTACTTG s panTro5.chr21 3674031 14 + 33445071 TGAAATGTTACTTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17300940 14 + 46275980 TGAAATGTTACTTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240007 14 - 13858734 TGAAATGTTACTTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4422207 14 + 32716333 TGAAATGTTAGTTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155376464 14 - 185818997 TGAAATGTTAGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162199155 14 - 192294377 TGAAATGTTAGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8677157 14 + 9440265 TGAAATGTTAGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8408183 14 + 21915920 TGAAATGTTAGCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14984625 14 - 90373283 TGAAATGTTAGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2152261 14 + 4234846 TGAAATGTTAGCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 158881 14 - 13750039 TGAAATGTTAGCTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21912471 14 + 50472720 TGAAATGTTAGTTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5020356 14 + 13128814 TGAAATGTTAGTTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9596675 14 - 14377064 TGAAATGTTACTTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8732964 14 + 9889416 TGAAATGTTAGTTG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20731254 14 - 38779656 CAAAATGTTTGCTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78099586 14 + 98207768 TGAAAGCCTCGTTA i mm10.chr16 I 2 C 0 s canFam3.chr31 13796692 14 + 39895921 TGAAGTGTTTGTTG i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1051285 6 + 2694913 I e dasNov3.JH568778 3568048 0 - 6883506 C e micMur3.chr31 19169100 6 + 47401472 I a score=1039215.000000 s hg38.chr21_KI270874v1_alt 49523 76 + 166743 TTTGTAGAACATTCTAATTTGAACTTTATTTGCTT-AAAAAGAATAAAAATTTTCTCAATTTTTATCCCAAGTTCAG s panTro5.chr21 3674045 76 + 33445071 TTTGTAGAACATTCTAATTTGAACCTTATTTGCTT-AAAAAGAATAAAAATTTTCTCAATTTTTATCCCAAGTTCAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17300954 76 + 46275980 TTTGTAGAACATTCTAATTTGAACCTTATTTGCTT-AAAAAGAATAAAAATTTTCTCAATTTTTATCCCAAGTTCAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240021 75 - 13858734 TTTGTAGAACATTCTAATTTGAACCTTATTTGCTT-AAAAAGAAT-AAAATTTTCTCAATTTTTATCCCAAGTTCAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4422221 76 + 32716333 TTTGTAGAACATTCTAATTCGAACCTTATTTGCTT-AAAAAGAATAAAAATTTTCTCAATTTTTATCCCAAGTTCAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155376478 67 - 185818997 TTTGTAGAACAGTCTAATTTGAATCTTATTTGCTT-AAAAAGAATAAA---------AATTTTTAACCCAGGTTCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162199169 67 - 192294377 TTTGTAGAACAGTCTAATTTGAATCTTATTTGCTT-AAAAAGAATAAA---------AATTTTTAACCCAGGTTCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8677171 67 + 9440265 TTTGTAGAACAGTCTAATTTGAATCTTATTTGCTT-AAAGAGAATAAA---------AATTTTTAACCCAGGTTCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8408197 76 + 21915920 TTTGTAGAACAGTCTAATTTGAATCTTACTTGCTT-AAAAAGAATAAAAATTTACTCAATTTTTAACCCAGGTTCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14984639 76 - 90373283 TTTGTAGAACAGTCTAATTTGAATCTTATTTGCTT-AAAAAGAATAAAAATTTACTCAATTTTTAACCCAGGTTCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2152275 76 + 4234846 TTTGTAGAACAGTCTGATTTGAATCTTATTTGCTT-AAAAAGAATAAAAATTTACTCAATTTTTAACCCAGGTTCAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 158895 76 - 13750039 TTTGTAGAACATTCTAATTTGAATCTTATTTGCTT-AAAAAGAATAAAAATTTACTCAATTTTTAACCCAAGTTCGG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21912485 76 + 50472720 TTTGTAGAATGCTCTAATTCAAACCTTATTTGCTT-AAAAAGAATAAGACTTTTCTCAATTTTTATCCCAAGGTCAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5020370 76 + 13128814 TTTGTAGAACGCTCTAATTCAAACCTTATTTGCTT-AAAAAGAATAAAACTTTTCTCAATTTTCATCCCAAGTTCAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9596689 76 - 14377064 TTTGTAGAACGCTCTAATTCAAACCTTATTTGCTT-AAAAAGAATAAAACTTTTCTCAATTTTTATCACAAGTTCAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8732978 76 + 9889416 TTTGTAGAACGCTCTAATTCAAACCTTATTTGCTT-AAAAAGAATAAAACTCTTCTCAATTTTTATCCCAAGTTCAG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19169106 75 + 47401472 TTTGTAGAACATTCTAATCC-AACCTGTTTTGCCT-GAAAAGAATAAAATTTTTCTCAATTTTTATCCCAAGTTTAG i micMur3.chr31 I 6 C 0 s proCoq1.NW_012144079v1 1051291 76 + 2694913 TTTGTAGAACATTCTAATTCAAACCTGTTTTGCCT-GAAAAGAATAAATTTTTTCTCAATTTTTATCCCAAGTTCAG i proCoq1.NW_012144079v1 I 6 C 0 s otoGar3.GL873528 20731268 76 - 38779656 TTTGTAGACCATTCGAACTCAAACCTGTTTTGCCT-CAAAAGAATAAAATTGTGCTCAATTTTCATCCCAAGTTCGG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78099600 73 + 98207768 TATACAGAAGATCC---TTGAAACCTGTTGTGTTTGAAAAAGAATAAAATTTTTCTCGATTTTT-CCCCAGGTTATG i mm10.chr16 C 0 C 0 s canFam3.chr31 13796706 76 + 39895921 TTTGCAGAATATTCTAACTCAAACTTACTTTGCTT-GAAAAAAATAAAACTTTTCTTAATTTTCTTCCGAAGTTCAG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3568048 0 - 6883506 C a score=3646986.000000 s hg38.chr21_KI270874v1_alt 49599 249 + 166743 GATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----AAATCAGAATATTAGCATCTAA---------------AAATACTTGCATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGACGTATACATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCATGAAAATTTTAAGGAGGCTTCACAGTAATAGAAAATAATGTCTGACTTTTACGATTGGCAACATTTTTCAT s panTro5.chr21 3674121 249 + 33445071 GATATCGAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----AAATCAGAATATTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGACGTATACATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCATGAAAATTTTAAGGAGGCTTCACAGTAATAGAAAATAATGTCTGACTTTTACGATTGGCAACATTTTTCAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301030 249 + 46275980 GATATCGAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----AAATCAGAATATTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGACATATACATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCATGAAAATTTTAAGGAGGCTTCACAGTAATAGAAAATAATGTCTGACTTTTACGATTGGCAACATTTTTCAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240096 249 - 13858734 GATATCGAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGACGTATACATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCATGAAAATTTTAAGGAGGCTTCACAGTAATAGAAAATAATGTCTGACTTTTACGACTGGCAACATTTTTCAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4422297 244 + 32716333 GATATCAAAACATGAATTTGTGAACAGTATTATAGGCCAAATTTT---------T-TTGTACTT----------AGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGACATATGCATGTTGAAGTTTCCAAGACCCTCGGTC-ACTGACAGTGATTTCTTCAAGAGAATTTTAAGGAGGCTTCACACTAATAGAAAATAATGTCTGACTTTTACGACAGGCAACATTTTTCAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155376545 249 - 185818997 GATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGATGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACATTTTTCAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162199236 249 - 192294377 GATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGATGTATGCATGTGGAAGTTTCCAAGGCCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACATTTTTCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8677238 249 + 9440265 GATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGATGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACATTTTTCAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8408273 249 + 21915920 GATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGATGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACATTTTTCAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14984715 249 - 90373283 GATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGATGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACATTTTTCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2152351 249 + 4234846 GATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGATGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACATTTTTCAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 158971 249 - 13750039 GATATCAAAACATGAATTTATGAACAGTATTATAGGCCAAATTTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGCATATATTT-CAAGAGATAAGCAGATAGCTA----------------TTTAGACGTATGCATGTGGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAGTAATATAAATTAATGTCTGACTTTTACGACTAGCAACATTTTTCAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21912561 248 + 50472720 GATATTGAAACATGAAATTATGAAAAGTATTATAGGCCAAA-TTT---------T-GAGTACTT-----ATATCAGAACATTAGCATCTAA---------------AAATACTTATATGAATATATTC-CTGGAGATAAGCAGATAGCTA----------------ATCAGACATATGCTTGTAGAAGTTTCCAAGACTCTCAGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGACTTCACAATAATAGAAAATAATATCTGACTTTTATGACTGGTGACATTTTTCAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5020446 248 + 13128814 GATATTGAAACATGAAATTATGAAAAGTATTATAGGCCAGA-TTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGAATGTATTT-CTGGAGATAAGCAGATAGCTA----------------ATCAGACATATGCATGTAGAAGTTTCCAAGACCCTCGGTC-ATTGAAAGTGATTTCTCCATGAGAATTTTAAGGAGGCTTCACAATAATAGAAAATAATATCTGACTTTTATGACTGGCAACATTTTTCAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9596765 248 - 14377064 GATATTGAAACATGAAATTATGAAAAGTATTATAGGCCAGA-TTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGAATATATTT-CTGGAGATAAGTAGATAGCTA----------------ATCAGACGTATGCATGTAGAAGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAATAATAGAAAATAATATCTGACTTTTAAGACTGGCAACATTTTTCAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8733054 248 + 9889416 GATATTGAAACATGAAATTATGAAAAGTATTATAGGCCAAA-TTT---------T-GAGTACTT-----ATATCAGAATGTTAGCATCTAA---------------AAATACTTGTATGAATATATTT-CTAGGGATAAGCAGATAGCTA----------------ATCAGACGTATGCATGTAGAAGTTTCCAAGACCCTCAGTC-ATTGACAGTGATTTCTTCATGAGAATTTTAAGGAGGCTTCACAATAATAGAAAATAATATCTGACTTTTATGACTGGCAACATTTTTCAT i aotNan1.NW_018487195v1 C 0 I 301 s micMur3.chr31 19169181 262 + 47401472 GATATTGAAACATGAACTTATGAAGAGTATTTTAGGGCAGTTTTT---------TTGAGTACTG-----ATATCAGAATGTGAGCATCTAA---------------AAATACGTGTATGCATATATTT-----AGGTAAGTAGATAGCTATTTAGATGTATAGCTGTTTAGATGTATGCATGTAGAAGTTTCCAAGACCCTTGGTC-ATTGGCTTTGATTTCTTCATGAGAATTTTAAAAAGGCTTCATAATAATAGAAAATAATATTGGACTTCTAACACTCACAACATTTTTCAT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1051367 246 + 2694913 GATATTGAAACATGAACTTATGAAGAGTATTTCAGGCCAGTTTTT---------GTGAGTACTT-----GTATCAGAATGTGAGCATCTAA---------------AAATACATGTATGCATACATTt-----agataaatagatagcta----------------tctagatggatGCATATAGAAGTTTCCAGGACCCTTGGTC-ATTGGCAGTGATTTCTTCATGAGAATTTTAAGAAGCATTCACAATAATAGAAAATAACGTTTGACTTTTAAGACTCGCAACATTTTTCAT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20731344 245 - 38779656 GATATTGAAACATGAACTTGTGAAGAATATTTCAGGCCAGGTTTT---------A-GAGTCCTT-----GTGTCAGAATGTGAACATCTAA---------------AAATACATGTACGCATATATTC-----AGTTGAGTAGATAGCTA----------------TTTAGATGTGTGCATATAGACGTTTCCAAGACCCTCGGTC-ATTGACAGTGATTTCTTTATGAGAATTTTAAGAAGCCTTCACAATAATAAAAAATAACATTTGACTTTTAAGATTGGCAACGATTTTCAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78099673 231 + 98207768 GATACTGAAACA--AATTTCTGGCGAGTGTCCTAAGCCA---TAC---------T-GAACATTTTAAAGATGTTCAAATTTGAGCATCCAAAACTTTGAGGAGCTGAAATATCTGTACACAGACGTTTATATAATAGAAGTAAATGGCTG----------------TTTGCAGGCATCCAAGT--------------------GAC-ACTAATAGTAATTTCTTCCTAAGAAATTAAAGG-----TCACAGTA---------AATTTCTAACTTTTAAGCATGGCAACATTTTTTTT i mm10.chr16 C 0 I 3 s canFam3.chr31 13796782 244 + 39895921 AATGTTGAAATATGAATTTATGAAGAGCACTATAGGCCAGTTTTTGTAAGTATGT-ATATATTT-----ATAACCAAATAGGAACATCTAA---------------AAACAC--------ATATATTT-CTTTGTATAGATAGGCAGATA----------------TTTAGATGTATACATGTACAAATTTCCAAGATCCTGGGTCTATAGACAATAATTTCTTCATGAGAATTTTAAAGA-TCCTCACAGTAATAA-----AATGTCTGACTTTTAAGACTGGCAACA-TTTTCAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3568048 175 - 6883506 ----------------------------------------------------------------------------gatatatagatatag---------------atatagatagatagatatagat-----agatagatagatagcag-------------------agataggtagatGTAGATGTTTCTAAGGCCCTAAGTC-ATTGGCAGAGATTTCTTCATGAAAATTTTAAGCAACCT---CAGCAATAGAAAATAATGTCTGACATTAAAA---TGCAAAAGTCATCAT i dasNov3.JH568778 C 0 C 0 a score=2725487.000000 s hg38.chr21_KI270874v1_alt 49848 158 + 166743 GGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTATGCAC-----ACAGCAGTGTAAAAAGCCTGGAAGCA s panTro5.chr21 3674370 158 + 33445071 GGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTATGCAC-----ACAGCAGTGTAAAAAGCCTGGAAGCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301279 158 + 46275980 GGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTATGCAC-----ACAGCAGTGTAAAAAGCCTGGAAGCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240345 158 - 13858734 GGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTATGCAC-----ACAGCAGTGTAAAAAGCCTGGAAGCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4422541 157 + 32716333 GGCATTTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAGTGAATAAACCAATT-CTCTGCAC-----ACAGCAGCGT-AAAAGCCTGGGAGCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155376794 157 - 185818997 GGCATCTTAACTGGAAAGCACAGAATTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAAAGTTTACATGAAGTGAGCAATAGTCACAAGATATGAATAAACCAATT-CTATGCAC-----ACGGCAGTGT-AAAAGGCTGGGAGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162199485 157 - 192294377 GGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTATGCAC-----ACGGCAGTGT-AAAAGGCTGGGAGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8677487 157 + 9440265 GGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTATGCAC-----ACAGCAGTGT-AAAAGGCTGGGAGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8408522 157 + 21915920 GGCATCTTAACTAGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGCAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTATGCAC-----ACGGCAGTGT-AAAAGGCTGGGAGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14984964 157 - 90373283 GGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAGCATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTATGCAC-----ACGGCAGTGT-AAAAGGCTGGGAGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2152600 157 + 4234846 GGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTATGCAC-----ACGGCAGTGT-AAAAGGCTGGGAGCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159220 157 - 13750039 GGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGAGAATGTTTACATGAAGTGAGCAATAGTCACAAGAAATGAATAAACCAATT-CTATGCAC-----ATGGCAGTGT-AAAAGGCTGGGAGCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21912809 157 + 50472720 GGCATCTTAACTGGAAAGCACAGAGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAAGGGAATATTTACACAAAGTGAGCAGTAGTCTCAAGAAGTGAATAAACCAATT-CTGTGCAC-----ATTGCAGTGT-AAAAGCCTGGAAGCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5020694 157 + 13128814 GGCATCTTAACTGGAAAACACAGAGTTACTTCTGAGAAGCATAATTGCTTCCAGAAATGTTTAACCCACTAGAGGAGTATTTACATGAAGTGAGCAGTAGTCTCAATAAGTGAATAAACCAATT-CTGTGCAC-----ATTGCAGTGT-AAAAGCCTGGGAGCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597013 155 - 14377064 GGCATCTTAACTGGAAAGCAC--AGTTACTTCTGAGAAACATAATTGCTTCCAGAAATGTTTAACCCACTAGGGGAATATTTACATGAAGTGAGCAGTAGTATCAAGAAGTGAATAAACCAATT-CTATGCAC-----ATTGCAGTGT-AAAAGCCTGGGAGCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8733603 157 + 9889416 GGCATCTTAAATGGAAAGCACAGAGTTACTTCTAAGAAATATAATTGCTTCCAGAAATGTTTAACCCACTAGAGGGATATTTACATGAAGTGAGCAGTAGTCTCAAGAAGTGAATAAACCAATT-CTGTGAAC-----ATTGCAGTGT-AAAAGGCTGGGAGCA i aotNan1.NW_018487195v1 I 301 C 0 s micMur3.chr31 19169443 155 + 47401472 AGCATCTTAACTGGAAAGCACAGAGTTACTTCTAAGAAACATAATTGCTTCCAGAAATG--TAAACCACTAAGGGAATGTTTATATGAAACAAGCAATAGTCGCAAGGAGTGAATAAACCAATT-CTATGCAC-----ATGGCAGTGT-AAAAACCTGGGAGCA i micMur3.chr31 C 0 I 30 s proCoq1.NW_012144079v1 1051613 155 + 2694913 AGCATCTTAACTGGAAAGCACAGAGTTACTTCTAAGAAACGTAATTGCTTCCAGAAACG--TAAACCACTAAGGGAATGTTTATATGAAATGAGCAATAGTCGCAAGGAGTGAATAAACCAATT-CTATGCAC-----GATGCAGTGT-AAAAACCTGGGAGCA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20731589 155 - 38779656 AGCATCTTAACTGGAAAGCACGGAGTTACTTCTAAGAAACATAATTGCTTCCAGAAATG-TTAAACCACTAAGGGAATGTTTATATGAAATGAGCAAGACTTGCAAGGAGTGAGTAAATCAATT-CTATGCGC-----GTTGCAGGGT--AAAATTTGGGAGCA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78099907 153 + 98207768 AGCATCTTGACTGGAAAGCACAGAGTTACTTCTAAGAAACATAATTGCTTCCAGAAATTTCTAAACCACTAAGAGAATGTTTATATGAAGTAAGCAATAGTCACAAGGACTGAATAAGCCCATTCCTACACAC-----ATGGCAGCCC----AGCCCAGGCA-- i mm10.chr16 I 3 C 0 s canFam3.chr31 13797026 157 + 39895921 AGCATCTTAATTGGAAAGCACAGAGTTACTTCTAAGAAACATAATTGCTTCCAGAAATGTTTAAACCACTAGG-GAATGTTTATATGAAATGAGCAATAGTCAC-AGGAGTGAATAAACCAGTT-CTATGTACTGCATGTTGTAGTGT-AAAAGCCTAGGA--- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3568223 154 - 6883506 AGCACCTTAACTGGAAATTA---AGTTACTTGAAAGAAACATAATTGATTCCAGAAATGTCTAAACCACAAGGGGAATGTTTATATGAAATGAGCAATAGTCCCAAGGAGTAAATAAACCAATT-CTAGATAT-----GTTGCAGAGT-AAAATACAGGGAGCA i dasNov3.JH568778 C 0 C 0 a score=369990.000000 s hg38.chr21_KI270874v1_alt 50006 31 + 166743 GGCATACAGGGATCTGTAAGAGAACCA-ATGC s panTro5.chr21 3674528 31 + 33445071 GGCATACAGGGATCTGTAAGAAAACCA-ATGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301437 31 + 46275980 GGCATACAGGGATCTGTGAGAGAACCA-ATGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240503 31 - 13858734 GGCATACAGGGATCTGTAAGAGAACCA-ATGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4422698 31 + 32716333 CGCATACAGGGATCTGTAAGAGAACCA-GTGC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155376951 31 - 185818997 CGCATACAGGGATCTATAAGAGAATCA-ATGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162199642 31 - 192294377 CGCATACAGGGATCTATAAGAGAATCA-ATGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8677644 31 + 9440265 TGCATACAGGGATCTATAAGAGAATCA-ATGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8408679 31 + 21915920 CGCATACAGGGATCTGTAAGAGAACCA-ATGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985121 31 - 90373283 CACATACAGGGATCTGTAAGAGAACCA-ATGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2152757 31 + 4234846 CGCATACAGGGATCTGTAAGAGAACCA-ATGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159377 31 - 13750039 CGCATACAGGGATCTGTAAGGGAACCA-ATGC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21912966 31 + 50472720 GGCATACAGGGATCCATAAAAGAACCA-ATGC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5020851 31 + 13128814 GGCATACAGGGATCCATAAAAGAACCA-ATGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597168 31 - 14377064 GGCATACAGGGATCCATAAAAGAACCA-ATGC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8733760 31 + 9889416 GGCATACAGGGATCCATAAAAGAACCA-ATGC i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1051768 30 + 2694913 CACACACAGAAGGCAATAAGAGAACCA--CGC i proCoq1.NW_012144079v1 C 0 I 2 s otoGar3.GL873528 20731744 28 - 38779656 --CACACGGAGGGTTATGAGAGGACCA--CGC i otoGar3.GL873528 C 0 I 2 s mm10.chr16 78100060 29 + 98207768 CGCATA---AGAACTGCAGGAGACCCATGTGC i mm10.chr16 C 0 C 0 s canFam3.chr31 13797183 31 + 39895921 -GTGCACAAAGAGTTATAAGAGAACCATGTGC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3568377 31 - 6883506 TGCAAATGGAGA-CTAAAAGAGAACTGCATGC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19169598 30 + 47401472 I a score=3200053.000000 s hg38.chr21_KI270874v1_alt 50037 219 + 166743 AGGACATGATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACCCAGCAGTT-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCT-TTTCCAAATCTTCACATTT-AAGTCTGTCTTCCCCCTGACCATGCCTTTCTTTCTGACATTCCATTATACTTTC-TTCACATTGTGTCTCATTTAAT s panTro5.chr21 3674559 219 + 33445071 AGGACACGATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACCCAGCAGTT-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCT-TTTCCAAATCTTCACATTT-AAGTCTGTCTTCCCCGTGACCATGCCTTTCTTTCTGACATTCCATTATACTTTC-TTCACATTGTGTCTCATTTAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301468 219 + 46275980 AGGACACGATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACCCAGCAGTT-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCT-TTTCCAAATCTTCACATTT-AAGTCTGTCTTCCCCGTGACCATGCCTTTCTTTCTGACATTCCATTATACTTTC-TTCACATTGTGTCTCATTTAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240534 219 - 13858734 AGGACACAATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACCCAGCAGTT-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCG-TTTCCAAATCTTCACATTT-AAGTCTGTCTTCCCCCTCACCATTCCTTTCTTTCTGACATTCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4422729 220 + 32716333 AGGACACAATCATTCTGTTCAATTGTTTTCTTATTGTCAGTAGTCTGGCAACTGCCACCCATTCCCCTTTAACCCAGCAGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAG-AGTCAACCAGTGCTCCATTTCCAAATCTTCACATTT-AGGTCTGTCTTCCCCCTCACCATTCCTTTCTTTCTGACATTCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155376982 219 - 185818997 AGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACACAGCGGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCG-TTTCCAAACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCATTTCTTTCTTACATTCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162199673 219 - 192294377 AGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACACAGCGGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCG-TTTCCAAACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCATTTCTTTCTTACATTCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8677675 219 + 9440265 AGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACACAGCGGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCG-TTTCCAAACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCATTTCTTTCTTACATTCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8408710 219 + 21915920 AGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACACAGCGGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCG-TTTCCATACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCGTTTCTTTCTTACATTCCATTATATTTTC-TTCACATTGTCTCTCATTTAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985152 219 - 90373283 AGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCGATTCCCCTTTAACCCAGCAGTG-----------------GATAGCACATGCGTTCCAGAAC--AAAT-AGTCAACCAGTTCTCG-TTTCCAAGCCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCGTTTCTTTCTTACATTCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2152788 219 + 4234846 AGGACACAATCATTCTGTTCAATTATTTTCTTAATGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAATACAGCGGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCG-TTTCCAAACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCGTTTCTTTCTTACATTCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159408 219 - 13750039 AGGACACAATCATTCTGTTCAATTATTTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACCCAGCGGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCAGTTCTCA-TTTCCAAACCTTCACACTT-AGGTCTGTCTTCCCCCTCACCATTCGTTTCTTTCTTACATTCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21912997 219 + 50472720 AAGGCACAATCATTCTGTTCAATCAATTTCTTATTGTCAGTAGTCTGGCAATTTTCACCCATTCCCCTTTAACACAGCAGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAC-AGTCAACCATTTCTCA-TTTCCAAATCTTCACACTT-AGGTCTGACTTTCTCCTCACCATTACTTTCTTTCTGACATGCCATTATACTTTC-TTCACATTGTCTTTCATTTGAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5020882 219 + 13128814 AAGACACAATCATTCTGTTCAATCAATTTCTTATTGTCAATAGTCTGGCATCTTCCACCCATTCCCCTTTAACACAGCAGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCATTTCTCA-TTTCCAAACCTTCACACTT-AGGTCTGACTTTCTCCTCACCATTACTTTCTTTCTGACATGCCATTATACTTTC-TTCACATTGTCTCGCATTTAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597199 219 - 14377064 AAGACGCCATCATTCTGTTCAATCAATTACTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCTTTTAACACGGCAGTG-----------------GATAGCACATGGCTTCCAGAGC--AAAT-AGTCAACCATTTCTCA-TTTCCAAACCTTCACACTT-AGGTCTGACTTTCTCCTCACCATTACTTTATTTCTGACATGCCATTATACTTTC-TTCGCATCATCTCTCATTTAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8733791 220 + 9889416 AAGGCACAATCATTCTGTTCAATCAATTTCTTATTGTCAGTAGTCTGGCAACTTCCACCCATTCCCCTTTAACACAGCAGTG-----------------GATAGCACATGGCTTCCAGAGC-AAAAT-AGTCAACCATTTCTCA-TTTCCAAACCTTGACACGT-AGGTCTGACTTTCTCCTCACCACTACTTTCTTTCTGACATGCCATTATACTTTC-TTCACATTGTCTCTCATTTAAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19169628 211 + 47401472 AGGACATAATCACTCTGTTCAATCATTTTCTTCTCATCATTTTTCTGGCAACTTCTACCCATCCCCCTTTAACCCAGCAGTG-----------------GATAGCACAAGTCTTCCAGACC--AAAT-ATTCCTCCAATTCTCT-TTTCCAAATCT-------T-ATGTCTGTCTTCTTTC-TACCATTCCTTTCTTTCTGACATCCCATCATACTTTC-TTCACATTGTCTCTCATTTAAT i micMur3.chr31 I 30 I 208 s proCoq1.NW_012144079v1 1051800 212 + 2694913 AGCACACAATCACTCTGTTCACTCATTTTCTTCTTGTCATTATTCTGGCAACTTCCACCCATCCCCCTTCAACTCAGCAGTG-----------------GATAGCACAAGCCTTCCAGAGC--GAATAATTCATCCAATTCTCG-TTTCCAAATCT-------T-ATGTCTGTCTTCTTCC-CACCATTGCTTTCTTTCTGACATCCCATCATATTTGC-TTCACATTGTCTCTCATTTAAT i proCoq1.NW_012144079v1 I 2 C 0 s otoGar3.GL873528 20731774 199 - 38779656 AGGACACCAACATTCTGTTGGATCATTTTCTTCTTGTCATTATTCGGGCAACTTTCTGCCAT-CCCCTTCAACCCAGAAGTA-----------------GATAGCACAAGACTGCTAGAGC--AAAT-GGTCTTCCAGTGC----TTTCCGAATC----------ATGTCTGTCTCCCCCT-CACC----CTTTCTTTCTGACATCCCATTGTACTTTC-TTTACATTG--TCTCACTTAAT i otoGar3.GL873528 I 2 C 0 s mm10.chr16 78100089 211 + 98207768 AGTACAC-ATCACTATGGTCAGCTTCTTCCTGCTTG-CATTACTCTTGCCACCTGCCACCATTCCTCTACCATGCAACACTG-----------------GAGAGCAGAGGCCTTCAATAGCTCAATG-AGT---CCGGTTCACT-CTCCCAAGTCTTCACCCTG-GCATCTGTCCTCC----CAGCCTTCCTTTCATTCCGAAGTCTCA-CATCCTTTC-TTCACATTGTCTCTTACTCAAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13797214 225 + 39895921 AAGACACAATCATTTTGTTCAATC----TCTTCTTGTCATTAGTCT-GCAACTTCTACCTATCCCTCTTCAAC-TAATAGTGGATCTCATGTCTTATGAGATAAGACATGGATAACAAAGC----AC-AGTTATCCAGTTCTCT-TGTCCAAAACTTCACACTTCATGCCTGTCCTCCCTC----CACTGTTTTCTTTTTGATGCCCCATCATACTTTC-TTCACATTGTCTCTTATTTAAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3568408 205 - 6883506 AAGACATAATCATTACGTTCAATCCCTTTCTTCTTGTCATTAGTTGCAGAACTTCCATCCATTCCCCTTTAACCCAGGAGTA-----------------GATCCCACATGCCTTCC------------AGTCATCCAGTTCTC--TCTCCAAATCTTCATACTTCATGTCTATCTTTTCCT-AATGATTCCATTATTTCTGAGGCTCCCTCATACTTACTTTCACATTGTCT-TTATT---- i dasNov3.JH568778 C 0 C 0 a score=2025147.000000 s hg38.chr21_KI270874v1_alt 50256 154 + 166743 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCCTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT--T----AAAAAGATAACTTTGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG s panTro5.chr21 3674778 154 + 33445071 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT--T----AAAAAGATAACTTTGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301687 154 + 46275980 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT--T----AAAAAGATAACTTTGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240753 154 - 13858734 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGACATTC----TCCATTTCATAGCTAGT--T----AAAAAGATAACTTTGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4422949 154 + 32716333 TGTTTCCTTCAATCTCTTTTTCTTAAATTTAATCTGCTTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCGTTCCTAGT--T----AAAAAGATAACTTTGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377201 154 - 185818997 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTCTCTGATACGCTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--T----AAAAAGATAACTTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162199892 154 - 192294377 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTCTCTGATACGCTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--T----AAAAAGATAACTTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8677894 154 + 9440265 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTCTCTGATACGCTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--T----AAAAAGATAACTTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8408929 154 + 21915920 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATACACTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--T----AAAAAGATAACTTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985371 154 - 90373283 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATACACTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--T----AAAAAGATAACTTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153007 154 + 4234846 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATACACTGAAGTAAAAC--TGGTCATTC----TCCATTCCATAGCTAGT--T----AAAAAGATAACTTAGAGTTCCCACAC-ACACTTGGAACTGCTCACCA-TCTCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159627 155 - 13750039 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCTTTGA---TCTGGAATATTTTCTGATACACTGAAGTAAAAC--TGATCATTC----TCCATTCCATAGCTAGT--T---AAAAAAGATAACTTAGAGTTCCTACAC-ACACTTGGAACTGCTCACCA-TCTCTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913216 147 + 50472720 TGCTTCCTTTAATCTCTTTTTCCTAAATTTGATCTGCTTTGA---TCTGAACTATTTTCTGATGTACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT--T------------AATTTTGATTTCCTACATAATACATGGAACGGATCACCA-TCTCTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021101 147 + 13128814 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCCTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGT--T------------AACTTTGAGTTCCTACATAACACATGGAACTGATCACCA-TCTCTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597418 147 - 14377064 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCCTTGA---TCTGGAATATTTTCTGATGCACTGAAGTAAAAC--TGGTCATTC----TCCATTTCATAGCTAGC--T------------AACTTTGAGCTCCTACATAACACATGGAACTGATCACCA-TCTCTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734011 147 + 9889416 TGCTTCCTTTAATCTCTTTTTCTTAAATTTGATCTGCCTTGA---TCTGGAATATTTTCTGATGCACTGAAATAAAAT--TGGTCATTC----TCCATTTCATAGCTGGT--T------------AACTTTGAGTTCCTACCTAACACATGGAACTGATCACCA-TCTCTG i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1052012 147 + 2694913 CATTACCTTTCATCTAGTTCTTTTAAAATTAATCTGTCTCGATCTTCTGGAATATTTTCTAATGCTCTGAAGTAAAAC----AACATTC----TCAATTTCAGGGCTAGT--T----CAAAAAATAACTGTGAGTTCCTATAG---------AACTGCTCACCA-TCTCTG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20731973 144 - 38779656 TGCTACCTTTAATCTATTTCTTTTAAAATTAATCTGCCTTGA---TCTGAAATATATTCTAATGTTCTAAAGTAAAAC----AACATTC----GCCATTTCGGGGCCAGT--T----CAAAAAAGAGCTTTAAGTTCCTGTGA---------AACTGCGCACCA-TTTCTG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78100300 157 + 98207768 TGCTTCCTTTTATCTCT---TACGGATGCTGATCTTCCTTGATCTTCTGGAATAG--TCTGATGCTATGAAGCAAAACAATACACATTC----TGTACTTCATAGCTGATGAT----AAAAAAAGGATGCTGAGTTGCTACACAAAACTTGGGACTATTCCTCA-TCTCTG i mm10.chr16 C 0 I 798 s canFam3.chr31 13797439 155 + 39895921 TGCTTCCTTTAATCTCTTTCCCTTAAATTTGATCTGCCTTGATCTCCTGGAATATTTTCTGATGCATT------------TCTCCATTTCACGTCCATTTCATGACTAGT--TACAAAAAATAATAACT--GAATTCCTACCCTGCACATGAAACTATTTACCATTTTCTG i canFam3.chr31 C 0 I 4 s dasNov3.JH568778 3568613 146 - 6883506 TGCTTCCTTTGATCTCT--------GCTGTGATCTGCTGTGATCTTTTAGAATATTTTCGGACGCTCCCCAGTAAAAG--TG--TACTA----TTCATTTCATGAATATT--T----AAAAACTTAATTT--AGCTCCTACACAGAATTTGCAACTGCTCAACG-TGTCTG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19169839 208 + 47401472 I a score=244478.000000 s hg38.chr21_KI270874v1_alt 50410 18 + 166743 -C-CAGTGTGCTCACATTTA s panTro5.chr21 3674932 18 + 33445071 -C-CGGTGTGCTCACATTTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301841 18 + 46275980 -C-CGGTGTGCTCACATTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240907 18 - 13858734 -C-CGGAGTGCTCACATTTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4423103 18 + 32716333 -C-CAGTGTGCTCACATTTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377355 18 - 185818997 -C-TGGTGTGCTCACATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200046 18 - 192294377 -C-TGGTGTGCTCACATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678048 18 + 9440265 -C-TGGTGTGCTCACATTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409083 18 + 21915920 -C-TGGTGTGCTCACATTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985525 18 - 90373283 -C-TGGTGTGCTCACATTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153161 18 + 4234846 -C-TGGTGTGCTCACATTTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159782 18 - 13750039 -C-CGGTGTGCTCACATTTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913363 18 + 50472720 -C-CAGTGTACTCACATTTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021248 18 + 13128814 -T-CGGTGTACTCACATTTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597565 18 - 14377064 -C-CGGTGTACTCATATTTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734158 18 + 9889416 -C-CGGTGTACTCACATTTA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1052159 19 + 2694913 -CTCGGTGTGCTCACATTTA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20732117 19 - 38779656 -CTCAGTGTACTCACGTTTA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13797598 18 + 39895921 -C-TGTGCTGCTCACATTTA i canFam3.chr31 I 4 I 717 s dasNov3.JH568778 3568759 19 - 6883506 CT-CATTCTACTCACattta i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19169839 208 + 47401472 I e mm10.chr16 78100457 798 + 98207768 I a score=44370.000000 s hg38.chr21_KI270874v1_alt 50428 3 + 166743 CTT s panTro5.chr21 3674950 3 + 33445071 CTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301859 3 + 46275980 CTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240925 3 - 13858734 CTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4423121 3 + 32716333 CTT i nomLeu3.chr25 C 0 I 2 s rheMac8.chr3 155377373 3 - 185818997 CTT i rheMac8.chr3 C 0 I 2 s macFas5.chr3 162200064 3 - 192294377 CTT i macFas5.chr3 C 0 I 2 s macNem1.NW_012019910v1 8678066 3 + 9440265 CTT i macNem1.NW_012019910v1 C 0 I 3 s cerAty1.NW_012002954v1 8409101 3 + 21915920 CTT i cerAty1.NW_012002954v1 C 0 I 2 s chlSab2.chr2 14985543 3 - 90373283 CTT i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012102865v1 2153179 3 + 4234846 CTT i manLeu1.NW_012102865v1 C 0 I 1 s colAng1.NW_012120598v1 159800 3 - 13750039 CTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913381 3 + 50472720 CTT i calJac3.chr21 C 0 I 2 s saiBol1.JH378168 5021266 3 + 13128814 CTT i saiBol1.JH378168 C 0 I 2 s cebCap1.NW_016107322v1 9597583 3 - 14377064 CTT i cebCap1.NW_016107322v1 C 0 I 2 s aotNan1.NW_018487195v1 8734176 3 + 9889416 CTT i aotNan1.NW_018487195v1 C 0 I 2 s proCoq1.NW_012144079v1 1052178 3 + 2694913 CTT i proCoq1.NW_012144079v1 C 0 I 42 s otoGar3.GL873528 20732136 3 - 38779656 CTT i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3568778 3 - 6883506 att i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19169839 208 + 47401472 I e canFam3.chr31 13797616 717 + 39895921 I e mm10.chr16 78100457 798 + 98207768 I a score=-5817.000000 s hg38.chr21_KI270874v1_alt 50431 2 + 166743 -AA s panTro5.chr21 3674953 1 + 33445071 --A i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240928 1 - 13858734 --A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4423126 2 + 32716333 -AA i nomLeu3.chr25 I 2 C 0 s rheMac8.chr3 155377378 2 - 185818997 -AA i rheMac8.chr3 I 2 C 0 s macFas5.chr3 162200069 2 - 192294377 -AA i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 8678072 2 + 9440265 -AA i macNem1.NW_012019910v1 I 3 C 0 s cerAty1.NW_012002954v1 8409106 2 + 21915920 -AA i cerAty1.NW_012002954v1 I 2 C 0 s chlSab2.chr2 14985547 2 - 90373283 -AA i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012102865v1 2153183 2 + 4234846 -AA i manLeu1.NW_012102865v1 I 1 C 0 s colAng1.NW_012120598v1 159803 1 - 13750039 --A i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913386 2 + 50472720 -AA i calJac3.chr21 I 2 C 0 s saiBol1.JH378168 5021271 2 + 13128814 -aa i saiBol1.JH378168 I 2 C 0 s cebCap1.NW_016107322v1 9597588 2 - 14377064 -AA i cebCap1.NW_016107322v1 I 2 C 0 s aotNan1.NW_018487195v1 8734181 2 + 9889416 -AA i aotNan1.NW_018487195v1 I 2 C 0 s dasNov3.JH568778 3568781 2 - 6883506 ta- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1052181 42 + 2694913 I e micMur3.chr31 19169839 208 + 47401472 I e otoGar3.GL873528 20732139 0 - 38779656 C e canFam3.chr31 13797616 717 + 39895921 I e mm10.chr16 78100457 798 + 98207768 I e panPan2.chr21 17301862 0 + 46275980 C a score=339455.000000 s hg38.chr21_KI270874v1_alt 50433 37 + 166743 AAAAAAAAAA------------GTCTAAGAAGACTTACGGCAAA-------GCATT s panTro5.chr21 3674954 37 + 33445071 AAAAAAAAAA------------GTCTAAGAAGACTTACGGCAAA-------ACATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301862 37 + 46275980 AAAAAAAAAA------------GTCTAAGAAGACTTACGGCAAA-------ACATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240929 37 - 13858734 AAAAAAAAAA------------GTCTAAGAAGACTTACGGCAAA-------ACATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4423128 37 + 32716333 AAAAAAAAAA------------GTCTAAGAAGACTTACAACAAA-------ACATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377380 44 - 185818997 AAAAAAAAAA------------GTCTAAGAAGGCTTACAGGAAAGGGATCGACATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200071 44 - 192294377 AAAAAAAAAA------------GTCTAAGAAGGCTTACAGGAAAGGGATCGACATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678074 44 + 9440265 AAAAAAAAAA------------GTCTAAGAAGGCTTACAGGAAAGGGATCGACATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409108 44 + 21915920 AAAAAAAAAA------------GTCTAAGAAGACTTACAGGAAAGGGATCGACATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985549 44 - 90373283 AAAAAAAAAA------------GTCTAAGAAGACTTACAGGAAAGGGATCAACATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153185 44 + 4234846 AAAAAAAAAA------------GTCTAAGAAGACTTACAGGAAAGGGATCGACATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159804 44 - 13750039 AAAAAAAAAT------------GTCTAAGAAGACTTACAGGAAAGGGATCGACATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913388 41 + 50472720 AAAAAAA---------------GTTTAAGAAGACTTGCAGGAAAGGGATTGACATG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021273 56 + 13128814 aaaaaaaaaaaaaaaaaaaaaGGTTTAAAAAGACTTGCAGGAAGGGGATTGACATG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597590 44 - 14377064 AAAAAAAAAA------------GTTTAAAAAGATTTGCAGGAAAGGGATTGACATG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734183 44 + 9889416 AAAAAAAAAA------------GTTTAAAAAGACTTGCAGGAAAGGGATTGACATG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20732139 29 - 38779656 ---AAAAAAA---------------TGAAGAAACTCACAGGAAAGGG--------- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13798333 32 + 39895921 AAAAAAAAAA------------ACATAAATTGATCTACTTAATT------------ i canFam3.chr31 I 717 I 1 s dasNov3.JH568778 3568783 37 - 6883506 -----aaaaa------------tattaaG--GACTAAGAGAAAAGGAATTGGCACA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1052181 42 + 2694913 I e micMur3.chr31 19169839 208 + 47401472 I e mm10.chr16 78100457 798 + 98207768 I a score=192249.000000 s hg38.chr21_KI270874v1_alt 50470 16 + 166743 ACCTTGAGAAGGACAG s panTro5.chr21 3674991 16 + 33445071 ACCTTGAGAAGGACAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301899 16 + 46275980 ACCTTGAGAAGGACAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240966 16 - 13858734 ACCTTGAGAAGGACAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4423165 16 + 32716333 ACCTTGAGAAGGACAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377424 16 - 185818997 ACCTTGAGAAGGACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200115 16 - 192294377 ACCTTGAGAAGGACAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678118 16 + 9440265 ACCTTGAGAAGGACAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409152 16 + 21915920 ACCTTGAGAAGGACAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985593 16 - 90373283 ACCTTGAGAAGGACAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153229 16 + 4234846 ACCTTGAGAAGGACAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159848 16 - 13750039 ACCTTGAGAAGGACAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913429 13 + 50472720 ACCTTG---AGGACAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021329 13 + 13128814 ACCTGG---AGGACAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597634 12 - 14377064 ACCTTG----GGACAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734227 13 + 9889416 ACCTTG---AGGACAG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19170047 16 + 47401472 ACCCTGAAAAAGACAG i micMur3.chr31 I 208 C 0 s proCoq1.NW_012144079v1 1052223 16 + 2694913 ACCTTGAAAAAGACAG i proCoq1.NW_012144079v1 I 42 C 0 s otoGar3.GL873528 20732168 13 - 38779656 ---TTGAAAAAGACAG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13798366 15 + 39895921 CTATTCAAAAGAAAA- i canFam3.chr31 I 1 I 2 s dasNov3.JH568778 3568820 16 - 6883506 AACTTGGGAAAGACAG i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78100457 798 + 98207768 I a score=24111.000000 s hg38.chr21_KI270874v1_alt 50486 2 + 166743 -TT s panTro5.chr21 3675007 2 + 33445071 -TT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301915 2 + 46275980 -TT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240982 2 - 13858734 -TT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4423181 2 + 32716333 -TT i nomLeu3.chr25 C 0 I 762 s rheMac8.chr3 155377440 2 - 185818997 -TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200131 2 - 192294377 -TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678134 2 + 9440265 -TT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409168 2 + 21915920 -TT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985609 2 - 90373283 -TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153245 2 + 4234846 -TT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159864 2 - 13750039 -TT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913442 2 + 50472720 -TT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021342 2 + 13128814 -TT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597646 2 - 14377064 -TT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734240 2 + 9889416 -TT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19170063 2 + 47401472 -TT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1052239 2 + 2694913 -TT i proCoq1.NW_012144079v1 C 0 C 0 s mm10.chr16 78101255 2 + 98207768 -TT i mm10.chr16 I 798 C 0 s dasNov3.JH568778 3568836 2 - 6883506 GT- i dasNov3.JH568778 C 0 C 0 e otoGar3.GL873528 20732181 0 - 38779656 C e canFam3.chr31 13798381 2 + 39895921 I a score=485552.000000 s hg38.chr21_KI270874v1_alt 50488 28 + 166743 AAGAATGTTTTGCTGATAGGCATATAAT s panTro5.chr21 3675009 28 + 33445071 AAGAATGTTTTGCTGATAGGCATATAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301917 28 + 46275980 AAGAATGTTTTGCTGATAGGCATATAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3240984 28 - 13858734 AAGAATGTTTTGCTGATAGGCATACAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4423945 28 + 32716333 AAGAATGTTTTGCTGATAGGCATATAAT i nomLeu3.chr25 I 762 C 0 s rheMac8.chr3 155377442 28 - 185818997 AAGAATGTTTTGCTGATAGGCATATAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200133 28 - 192294377 AAGAATGTTTTGCTGATAGGCATATAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678136 28 + 9440265 AAGAATATTTTGCTGATAGGCATATAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409170 28 + 21915920 AAGAATGTTTTGCTGATAGGCATATAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985611 28 - 90373283 AAGAATGTTTTGCTGATAGGCATATAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153247 28 + 4234846 AAGAATGTTTTGCTGATAGGCATATAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159866 28 - 13750039 AAGAATATTTTGCTGATAGGCATATAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913444 28 + 50472720 AAGAATGTTTTGCTGATACGCATATAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021344 28 + 13128814 AAGAATGTTTTGCTGATAGGCATATAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597648 28 - 14377064 AAGAATGTTTTGCTGATAGGCATATAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734242 28 + 9889416 AAGAATGTTTTGCTGATAGGCATATAAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19170065 28 + 47401472 AAGAATGTTTTACTGATAGACATATAAT i micMur3.chr31 C 0 I 6 s proCoq1.NW_012144079v1 1052241 28 + 2694913 AAGAATGTTTTACTAATAGACATATAAT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20732181 23 - 38779656 -----TGTTTTACTGATAGGCATATAGT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101257 26 + 98207768 AAAAAATATTTACTGATAG-CAGA-AAT i mm10.chr16 C 0 I 7 s canFam3.chr31 13798383 28 + 39895921 AAGAATGTTTTGCTGACAAGTATATAAC i canFam3.chr31 I 2 C 0 s dasNov3.JH568778 3568838 28 - 6883506 AACCATGGTTTGCTGATAAGGACATAAT i dasNov3.JH568778 C 0 C 0 a score=514906.000000 s hg38.chr21_KI270874v1_alt 50516 37 + 166743 CACTTGACTGATTTT-CACAAACATTTGTGGGAATCTG s panTro5.chr21 3675037 37 + 33445071 CACTTGACTGATTTT-CACAAACATTTGTGGGAATCTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301945 37 + 46275980 CACTTGACTGATTTT-CACAAACATTTGTGGGAATCTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241012 37 - 13858734 CACTTGACTGATTTT-CACAAACATTTGTGGGAATCTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4423973 37 + 32716333 CACTTGACTGATTCT-CACAAACATTTGTGGGAATCTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377470 37 - 185818997 CACTTGACTGATTCT-CACAAACATTTGTGGGAATCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200161 37 - 192294377 CACTTGACTGATTCT-CACAAACATTTGTGGGAATCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678164 37 + 9440265 CACTTGACTGATTCT-CACAAACATTTGTGGGAATCTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409198 37 + 21915920 CACTTGACTGATTCT-CACAAACATTTGTGGGAATCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985639 37 - 90373283 CACTTGACTGATTCT-CACAAACATTTGTGGGAATCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153275 37 + 4234846 CACTTGACTGATTCT-CACAAACATTTGTGGGAATCTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159894 37 - 13750039 CACTTGACTGATTCT-CACAAACATTTGTGGGAATCTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913472 37 + 50472720 CACTTGCCTGATTCT-TACAAACATTTGTAGGGAACTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021372 37 + 13128814 TGCTTGCCTAATTCT-CACAAACATTTGTAGGGATCTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597676 37 - 14377064 CACTTGCCTAATTCT-CACAAACATTTGTAGGGATCTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734270 37 + 9889416 CACTTGCCTGATTCT-CACAAACATTTGTAGGAATCTT i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1052269 31 + 2694913 CACTTGATTGATTCT-CGTAA------ACAGGACTCTT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20732204 37 - 38779656 CACTTGACTGATTCT-CATAACTATTGGTAGAAATCTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101290 37 + 98207768 TCCATGAATCCTGGT-CAGAAATGCCCGAGGAAGTCTG i mm10.chr16 I 7 C 0 s canFam3.chr31 13798411 38 + 39895921 CACTTGACTGATTCTAAACAAACATTTGTGGGAATCTT i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3568866 37 - 6883506 CATTGTACCAGTTCT-GATAAACATCTGTGGGACTCTT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19170093 6 + 47401472 I a score=1379468.000000 s hg38.chr21_KI270874v1_alt 50553 106 + 166743 TTAAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGATTC----------------------------------------ATT--------------AAA-------GTG-GTGAAAATTTTCCATAAAACTT s panTro5.chr21 3675074 106 + 33445071 TTAAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGATTC----------------------------------------ATT--------------AAA-------GTG-GTGAAAATTTTCCATAAAACTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17301982 106 + 46275980 TTAAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGATTC----------------------------------------ATT--------------AAA-------GTG-GTGAAAATTTTCCATAAAACTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241049 106 - 13858734 TTAAAGTATCTTAGTCCAGTTCAGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGATTC----------------------------------------ATT--------------AAA-------GTG-GTGAAAATTTTCCATAAAACTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424010 106 + 32716333 TTAAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGATTC----------------------------------------ATT--------------AAA-------GTG-GTGAAAATTTTCCATAAAACTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377507 162 - 185818997 TTGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGAC-t-ttttttttttttttttGGGTG-AAAAAAAAATGTGAAA-ATTTTTTTCA-CATTCAAAAAAAAAATGTG-GTGAAAATTTTCCATAAAACTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200198 162 - 192294377 TTGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGACtt-tttttttttttttttttGGTG-AAAAAAAAATGTGAAA-ATTTTTTTCA-CATTC-AAAAAAAAATGTG-GTGAAAATTTTCCATAAAACTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678201 163 + 9440265 TTGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGAC-t-tttttttttttttttttGGTG-AAAAAAAAATGTGAAACATTTTTTTCACCATTC-AAAAAAAAATGTG-GTGAAAATTTTCCATAAAACTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409235 162 + 21915920 TTGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGACTC-TTTTTCTTTTTTTTTTTGGTG-AAAAAAAAATGTGAAA-ATTTTTTTCA-CGTTC-AAAAAAAAATGTG-GTGAAAATTTTCCATAAAACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985676 155 - 90373283 TTGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCCACATCTTGACCCAAAGGCCTCCAAACAA-AAAGACTC---------TTTTTTTTTGGTGAAAAAAAAAATGTGAAA-ATTTTTTTCA-CATTC-AAAAAAAAATGTG-GTGAAAATTTTCCATAAAACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153312 164 + 4234846 TTGAAGTATCTTAGTCCAGTTTGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGACTCttttttttttttttttttGGTG-AAAAAAAAATGTGAAA-ATTTTTTTCA-CATTCAAAAAAAAAATGTG-GTGAAAATTTTCCATAAAACTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 159931 158 - 13750039 TTGAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTGACCCAAAGGCCTCCAAACAA-AAAGATCC----TTTTTTTTTCTTTTGGAG--AAAAAAAATGTGAAA-ATTTTTTTCA-CATTT-AAAAGAAAATGTG-GTGAAAATTTTCCATAAAACTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913509 107 + 50472720 TTAAAGTATCTTAGTCCAGTTCAGTC-TCAGCAGGACCCAACATCTTGACCCAAAAGCCTCCAAACAAGAAACATTC----------------------------------------ATT--------------AAA-------GTG-GTAAATATTTTCCATAAAACTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021409 107 + 13128814 TTAAAGTATCTTAGTCCAGTTCGGTC-TCAGGAGGACCCAGCATCTTGACCCAAAAGCCTCCAAACAAGAAAGATTC----------------------------------------ATT--------------AAA-------GTG-CTGGAAATTTTCCATAAAACTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597713 107 - 14377064 TTTAAGTATCTTAGTCCAATTCGGTC-TCAGCAGGATCCAACATCTTGACCCAAAAGCCTCCAAACAAGAAAGATTC----------------------------------------ATT--------------AAA-------GTG-GTGAAAATTTTCCATAAAACTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734307 107 + 9889416 TTAAAGTATCTTAGTCCAGTTCGGTC-TCAGCAGGACCCAACATCTTTACCCAAAAGCCTCCAAACAAGAAAGATTA----------------------------------------ATT--------------AAA-------GTG-GCGAAAATTTTCCATAAAACTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19170099 107 + 47401472 TTAAAGCATCTTAATCCAGCTGCATC-TCAGCAGGACCCAACATCTTGACCCAAAAACCTTCAAATAA-AAAGGTTC----------------------------------------ATT--------------AAA-------ATGAGTGAGAATTTTCCATAAAACTT i micMur3.chr31 I 6 I 677 s proCoq1.NW_012144079v1 1052300 107 + 2694913 TTAAAGCATCGTAGTCCAGCTACATC-TCAGCAGGACCAAACATCTTAACCCAAAAGCCTTCAGACAA-AAAGATTC----------------------------------------ATT--------------AAA-------ATGAGTGTTAATTTTCCATAAAACTT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20732241 107 - 38779656 TTAAAGCATCTTAGTCCAGGCTGATA-TCAGCAGGACCCAACATCTCGACTCAAAAGACTTCGAGCAA-AAGGATGC----------------------------------------ATT--------------AAA-------ATGAGTGCGAATTATCCATAAAACTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101327 95 + 98207768 --TAAACCTCTCAGAACAGTT-----------AGAACTCAAC-TCAAGCTCCAAACGTCTCCAAACACGAAAGCTCT----------------------------------------AAT--------------AAA-------ATAAGTGAGAATCTTCCATAAAACTT i mm10.chr16 C 0 C 0 s canFam3.chr31 13798450 104 + 39895921 TTAAAGCAATTTTTTTCACCTGGATCTTCAGTTGGACCAAGCATCTGAACCCAAAAACCTCCAAACAA-AAAG--------------------------------------------ATT--------------AAA-------ATGCGTGAGAATTTTCCAAAAAACTT i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3568903 107 - 6883506 TGAAAGAATCTTACTTCAATTAGGTG-TAAGCAGGACACAGCATCTTGATCCAAAAAACTCCAAATAA-AAAGATTC----------------------------------------ATT--------------AAA-------ATGAGTGAGAATTTTCCATAAAAATT i dasNov3.JH568778 C 0 C 0 a score=1145984.000000 s hg38.chr21_KI270874v1_alt 50659 83 + 166743 TAAGACATCAAAGAACTAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA s panTro5.chr21 3675180 83 + 33445071 TAAGACGTCAAAGAACTAATTTCAGTATTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302088 83 + 46275980 TAAGACGTCAAAGAACTAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241155 83 - 13858734 TAAGATATCAAAGAATTAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424116 83 + 32716333 TAAGACATCAAAGAATTAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTGTAAGTTTAGAGCTAATATTGGAACTAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377669 83 - 185818997 TAAGGCGTCAAAGAATGAATTTCTGTAGTTCCCTGTCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200360 83 - 192294377 TAAGGCGTCAAAGAATGAATTTCTGTAGTTCCCTGTCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678364 82 + 9440265 TAAGGCGTCAAAGAATGAATTTCTGTAGTTCCCTGTCATGC-AAAATATTACAGTATAAGTTT-GAGCTAATATTGGAACTAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409397 83 + 21915920 TAAGGCATCAAAGAATGAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985831 83 - 90373283 TAAGGCATCAAAGAATGAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153476 83 + 4234846 TAAGGCATCAAAGAATGAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160089 83 - 13750039 TAAGGCATCAAAGAATGAATTTCTGTAGTTCCCTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913616 83 + 50472720 TAAGACGTCAAAGAACAAATTTCTGTAGTTCTTTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021516 83 + 13128814 TAAGATGTCAAAGAACAAATTTCTGTAGTTCTTCACCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597820 83 - 14377064 TAAGATGTCAAAGAACAAATTTCTGTAGTTCTTCGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATACTGGAACTATA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734414 83 + 9889416 TAAGATGTCAAAGAACAAATTTCTGTAGTTCTTTGCCATGC-AAAATATTACAGTATAAGTTTAGAGCTAATATTGGAACTAGA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1052407 80 + 2694913 CAACATG---TACAATGAATTTCTGTAGTTCCTTGCCGTAT-AAAACATTATAGTACAAATTTAGAACTAATATTGGAACTAGA i proCoq1.NW_012144079v1 C 0 I 7482 s otoGar3.GL873528 20732348 83 - 38779656 TAATATGTTATACAATGAATTTCTATAGTTCCCTGCCATGT-AGAACACTACAGTATAAATTCAGAACTAATGTTGGAACTAGA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101422 73 + 98207768 TAAGATGCCAAAGAACAGATTTTTATCATTCCCCACCACGC-AAAATGTCACTGTCCAGAATCAGAGCTAGGAT---------- i mm10.chr16 C 0 C 0 s canFam3.chr31 13798554 78 + 39895921 CAAGATG-AAAACTTCAAACTTCTATACTTGCCTGCCATGCAAAAATATTGTAGTGCAAATTTAGGGCTAATA---GAACCC-- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569010 73 - 6883506 CAACATATTATAGAATGAATTTCAATAGTTCCCTGAC---C-------TTATAGTA-AACTTTAGAACTAATATTGAAACTAGA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19170206 677 + 47401472 I a score=397442.000000 s hg38.chr21_KI270874v1_alt 50742 49 + 166743 ATAA-------TCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAAC s panTro5.chr21 3675263 49 + 33445071 ATAA-------TCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302171 49 + 46275980 ATAA-------TCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241238 49 - 13858734 ATAA-------TCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424199 49 + 32716333 ATAA-------TCTAGAACAGATAGATATTCTCAAAATATTGTACATACTTTAAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377752 40 - 185818997 CTAA-------TCTAGAACAGATA----TTCTCAAAATATTGTACA-----TAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200443 40 - 192294377 CTAA-------TCTAGAACAGATA----TTCTCAAAATATTGTACA-----TAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678446 41 + 9440265 CTAA-------TCTAGAACAGATAT---TTCTCAAAATATTGTACA-----TAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409480 45 + 21915920 CTAA-------TCTAGAACAGATA----TTCTCAAAATATTGTACATACTTTAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985914 45 - 90373283 CTAA-------TCTAGAACAGATA----TTCTCAAAATGTTGTACATATTTTAAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153559 45 + 4234846 CTAA-------TCTAGAACAGATA----TTCTCAAAATATTGTACATACTTTAAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160172 45 - 13750039 TTAA-------TCTAGAACAGATA----TTCTCAAAATATTGTACATACTTTAAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913699 44 + 50472720 TTAA-------GGTAGAACAGATAGATAATCTCAAACTATTGTACATACTT----- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021599 44 + 13128814 TTAA-------TGTAGAACAGATAGATATTCTCAAACTATTGTGCATACTT----- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597903 49 - 14377064 CTAA-------TGTAGAACATATAGATATTCTCAAACTATTGTACATACTTTAAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734497 49 + 9889416 TTAA-------TGTAGAACAGATAGATACTCTCAAACTATTGTACATACTTTAAAC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20732431 52 - 38779656 CTAAT----CTTCTAGGACAAGCAGCCACCCTCAAAATATTGCAAAAGCTTTAAAC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101495 15 + 98207768 -----------------------------------------GTAAAGGCTTTCGTC i mm10.chr16 C 0 C 0 s canFam3.chr31 13798632 44 + 39895921 ATCT-------TCTAGGACAGACT----TTCTAAAAATATTGTATATGCTTTAAA- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569083 48 - 6883506 ----TCAAGCTTCTAAAACAGACA----TTCTCAAAATACTATATATGCTTTATAC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1052487 7482 + 2694913 I e micMur3.chr31 19170206 677 + 47401472 I a score=116542.000000 s hg38.chr21_KI270874v1_alt 50791 12 + 166743 -TAAAATCTAAAA s panTro5.chr21 3675312 12 + 33445071 -TAAAATCTAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302220 12 + 46275980 -TAAAATCTAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241287 12 - 13858734 -TAAAATCTAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424248 12 + 32716333 -TAAAATATAAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377792 10 - 185818997 -TAAAATCTA--A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200483 10 - 192294377 -TAAAATCTA--A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678487 10 + 9440265 -TAAAATCTA--A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409525 10 + 21915920 -TAAAATCTA--A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985959 10 - 90373283 -TAAAATCTA--A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153604 10 + 4234846 -TAAAATCTA--A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160217 10 - 13750039 -TAAAATCTA--A i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913743 12 + 50472720 -TAAAATCTAAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021643 12 + 13128814 -TAAAATCTAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597952 12 - 14377064 -TAAAATCTAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734546 12 + 9889416 -TAAAATCTAAAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19170883 12 + 47401472 -TAAAATCTAAGA i micMur3.chr31 I 677 C 0 s otoGar3.GL873528 20732483 12 - 38779656 -TAAAATCTAAGA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101510 12 + 98207768 -TGAAATTTAAGA i mm10.chr16 C 0 I 3 s canFam3.chr31 13798676 8 + 39895921 -----ATCTGAGC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569131 13 - 6883506 TAAAAACCTGAGA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1052487 7482 + 2694913 I a score=1209052.000000 s hg38.chr21_KI270874v1_alt 50803 84 + 166743 AAGATCCAAAAACAC----------------------CCGTTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACTTCT-AGCTAAAA--GGAGCAAAC---A s panTro5.chr21 3675324 84 + 33445071 AAGATCCAAAAACAC----------------------CCGTTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACTTCT-AGCTAAAA--GGAGCAAAC---A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302232 84 + 46275980 AAGATCCAAAAACAC----------------------CCGTTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACTTCT-AGCTAAAA--GGAGCAAAC---A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241299 84 - 13858734 AAGGTCCAAAAACGC----------------------CCATTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACTTCT-AGCTAAAA--GGAGCAAAC---A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424260 80 + 32716333 AAGATCCAAAAACAC----------------------CCATTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACTTCT-AGCTAAAA--GGAG----C---A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377802 85 - 185818997 AAGATCCAAAAACAC----------------------CCTTTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACATCT-AGCTAAAA--GGAGCAAAC--AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200493 84 - 192294377 AAGATCCAAAAACAC----------------------CCTTTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACATCT-AGCTAAAA--GGAGCAAAC---A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678497 86 + 9440265 AAGAT-CAAAAACAC----------------------CCTTTGCAGTTTGCAA--CAT--CAGTCT---TACAGAAAAATTACAATGTGTAC-TCT-AGCTAAAAGGGGAGCAAAC--AA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409535 84 + 21915920 AAGATCCAAAAACAC----------------------CCTTTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACATCT-AGCTAAAA--GGAGCAAAC---A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14985969 86 - 90373283 AAGATCCAAAAACAC----------------------CC-TTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACATCT-AGCTAAAA--GGAGCAAACAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153614 84 + 4234846 AAGATCCAAAAACAC----------------------CCTTTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACATCT-AGCTAAAA--GGAGCAAAC---A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160227 84 - 13750039 AAGATCCAAAAACAC----------------------CCTTTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTACATCT-AGCTAAAA--GGAGCAAAC---A i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913755 84 + 50472720 AGGATCCAAGAATAC----------------------CCATTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACCATGTGTGCTTCT-AGCTAAAA--GCAGCAAAC---A i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021655 85 + 13128814 AGGATCCAAGAACAC----------------------CCATTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAACGTGTGCTTCTAAGCTAAAA--GCAGCAAAC---A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9597964 84 - 14377064 AGGATCCAAGAACAC----------------------CCATGGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAACGTGTGCTTCT-AGCTAAAA--GCAGCAAAC---A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734558 84 + 9889416 AGGATCCAAGAACAC----------------------CCATTGCAGTTTGCAA--CAT--GAGTCT---TACAG-AAAATTACAATGTGTGCTTCT-AGTTAAAA--GCAGCAAAC---A i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19170895 86 + 47401472 AAGAACCAAAAACAC----------------------CTATTGCAGTTTGCAA--CATACGAATGT---TATAG-AAAATTACAATGGGTACTTTT-AGCTAAAT--GCAGCAAAC---A i micMur3.chr31 C 0 I 95 s proCoq1.NW_012144079v1 1059969 84 + 2694913 AAGAACCAAAAACAC----------------------CCATTGCAGTTTGCGA--CGT--GAATAT---TACAG-AAAATTACAATGTGTATTTCT-AGCTAAAA--GCAACAAAC---A i proCoq1.NW_012144079v1 I 7482 C 0 s otoGar3.GL873528 20732495 86 - 38779656 AAGAACCAAAAATAT----------------------TCATTGCAGTTTGCAA--CATATGAATGT---CACAG-GGAATTATAATGTATGTTTCT-AGCTAAAA--GCAACAAAC---A i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101525 96 + 98207768 AAAAAAAAAAAACACACACACACACACACAATAATGACCATTGCAGTGTACA--------GAA---------AA-AAAATCACAATGTGTGCTTCT-GGCTCAGA--GCAGCAAAC---A i mm10.chr16 I 3 C 0 s canFam3.chr31 13798684 86 + 39895921 -AATACCCAAAATAT----------------------TCATTGCAGTTGGCAA--CATATGAGCAT---TATAGAAAAATCACAATGTGTTCTTCT-GGCTACAC--ACAACAAAC---A i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569144 86 - 6883506 AATACCCAAAAACAA----------------------TAATTACAATTTGCAATTTAT--CAGTATTAGTATAG-TAAACTACAAGGTGTACTTCT-GGCTAAAA--GAAGCAA------ i dasNov3.JH568778 C 0 C 0 a score=650846.000000 s hg38.chr21_KI270874v1_alt 50887 49 + 166743 AACAAAAATCAACGC---TAA---GTGAATGATGTAACTGTTTTGTATCTTTTCA s panTro5.chr21 3675408 49 + 33445071 AACAAAAATCAACGC---TAA---GTGAATGATGTAACTGTTTTGTATCTTTTCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302316 49 + 46275980 AACAAAAATCAACGC---TAA---GTGAATGATGTAACTGTTTTGTATCTTTTCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241383 49 - 13858734 AACAAAAATCAATGC---TAA---GTGAATGATGTAACTGTTTTGTATCTTTTCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424340 49 + 32716333 AACAAAAATCAATGC---TAA---GTGAATGATGTAACTGTTTTGTATCTTTTCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377887 49 - 185818997 AAAAAAAATCAATGC---TAA---GTGAATGATGTAACTGTTTTGTGTCTTTTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200577 49 - 192294377 AAAAAAAATCAATGC---TAA---GTGAATGATGTAACTGTTTTGTGTCTTTTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8678583 47 + 9440265 AAAAAAAATCAATGC---TAA---GTGAATGA--TAACTGTTTTGTGTCTTTTCA i macNem1.NW_012019910v1 C 0 I 465 s cerAty1.NW_012002954v1 8409619 49 + 21915920 AAAAAAAATCAATGC---TAA---GTGAATGATGTAACTGTTTTGTGTCTTTTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986055 48 - 90373283 AAAAAAAATCAA-GC---TAA---GTGAATGATGTAACTGTTTTGTGTCTTTTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153698 49 + 4234846 AAAAAAAATCAACGC---TAA---GTGAATGATGTAACTGTTTTGTGTCTTTTCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160311 49 - 13750039 AACAAAAATCAATGC---TAA---GTGAATGATGTAACTGTTTTGTGTCTTTTCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913839 49 + 50472720 AACAAAAATCTATGC---TAA---GTGAATAATGTAACTGTTTTGTACCTTTTCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021740 49 + 13128814 AACAAAAATCCATGC---TAA---GTGAATAATGTAACTGTTTTGTACCTTTTCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598048 49 - 14377064 AACAAAAATCCATGC---TAA---GTGAATAATGTAACTATTTTGTACGTTTTCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734642 49 + 9889416 AACAAAAATCTATGC---TAA---GTGAATAATGTAACTGTTTTGTACATTTTCA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1060053 52 + 2694913 AAAAAAAACCTATGC---TAAGACGTGATCGATGTAATTGTTTTTTATTTTTTTA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20732581 52 - 38779656 AAAAAAGACCTATGC---TGAGAAGTAATTGATGCAATTGTTTTATATGTTTTTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101621 50 + 98207768 --AAAAGGTCTATGT---TGAGGAGTGATTGATGTAGCTGGTTTGTATCTTTAAT i mm10.chr16 C 0 I 2 s canFam3.chr31 13798770 49 + 39895921 -CAAAATATCTATGCAAATAA---GGAACTGATGTAATGGTTTTGTGTCTTCA-- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569230 52 - 6883506 AACAAAAATCTATGC---TGAGAAGTGACTGAAGGGACTGTTTTATATCTTTTCA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19170981 95 + 47401472 I a score=38424.000000 s hg38.chr21_KI270874v1_alt 50936 4 + 166743 TCCA s panTro5.chr21 3675457 4 + 33445071 TCCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302365 4 + 46275980 TCCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241432 4 - 13858734 TCCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424389 4 + 32716333 TCCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377936 2 - 185818997 --CA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200626 2 - 192294377 --CA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8409668 2 + 21915920 --CA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986103 2 - 90373283 --CA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153747 2 + 4234846 --CA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160360 2 - 13750039 --CA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913888 4 + 50472720 TGCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021789 4 + 13128814 TCCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598097 4 - 14377064 TCCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734691 4 + 9889416 TCCA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1060105 4 + 2694913 TCCA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20732633 4 - 38779656 TCCG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101673 4 + 98207768 TCCA i mm10.chr16 I 2 C 0 s canFam3.chr31 13798819 4 + 39895921 TCTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569282 4 - 6883506 TGCA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19170981 95 + 47401472 I e macNem1.NW_012019910v1 8678630 465 + 9440265 I a score=91454.000000 s hg38.chr21_KI270874v1_alt 50940 8 + 166743 CTCAAaaa s panTro5.chr21 3675461 8 + 33445071 CTCAAaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302369 8 + 46275980 CTCAAaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241436 8 - 13858734 CTCAAaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424393 8 + 32716333 CTCAAaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377938 8 - 185818997 CTCAAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200628 8 - 192294377 CTCAAAAA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8409670 7 + 21915920 CTCAAaa- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986105 8 - 90373283 CTCAAaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153749 8 + 4234846 CTCAAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160362 8 - 13750039 CTCAAAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913892 8 + 50472720 GTCAAACA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021793 8 + 13128814 CTCAAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598101 8 - 14377064 CTCAAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734695 8 + 9889416 CTCAAAAA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1060109 8 + 2694913 CTCAGAAA i proCoq1.NW_012144079v1 C 0 I 25 s otoGar3.GL873528 20732637 8 - 38779656 CTCAGAAG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13798823 8 + 39895921 TTCAGATA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569286 8 - 6883506 TTCACAAA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19170981 95 + 47401472 I e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I a score=113253.000000 s hg38.chr21_KI270874v1_alt 50948 11 + 166743 gaagaaagaaa s panTro5.chr21 3675469 11 + 33445071 gaagaaagaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302377 11 + 46275980 gaagaaagaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241444 11 - 13858734 gaagaaagaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424401 11 + 32716333 gaagaaagaga i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377946 11 - 185818997 GCagaaagaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200636 11 - 192294377 GCagaaagaaa i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8409677 9 + 21915920 --agaaagaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986113 11 - 90373283 gaagaaagaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153757 11 + 4234846 GCagaaagaaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160370 11 - 13750039 GCagaaagaag i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913900 11 + 50472720 GTAGAAAGAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021801 11 + 13128814 GTAGAAATAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598109 11 - 14377064 GTAGAAAGAAA i cebCap1.NW_016107322v1 C 0 I 2 s aotNan1.NW_018487195v1 8734703 11 + 9889416 GTAGAAAGAAA i aotNan1.NW_018487195v1 C 0 I 2 s otoGar3.GL873528 20732645 11 - 38779656 TCAAAAAGCAA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13798831 11 + 39895921 GCAGAAAGAAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569294 11 - 6883506 GCAAAAGGAAG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e micMur3.chr31 19170981 95 + 47401472 I e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I a score=11977.000000 s hg38.chr21_KI270874v1_alt 50959 2 + 166743 ga s panTro5.chr21 3675480 2 + 33445071 ga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302388 2 + 46275980 ga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241455 2 - 13858734 ga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424412 2 + 32716333 ga i nomLeu3.chr25 C 0 I 3 s rheMac8.chr3 155377957 2 - 185818997 ga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200647 2 - 192294377 ga i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8409686 2 + 21915920 ga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986124 2 - 90373283 ga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2153768 2 + 4234846 ga i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160381 2 - 13750039 aa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913911 2 + 50472720 TA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021812 2 + 13128814 TA i saiBol1.JH378168 C 0 C 0 s otoGar3.GL873528 20732656 1 - 38779656 -A i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 13798842 2 + 39895921 GA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569305 2 - 6883506 GG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e micMur3.chr31 19170981 95 + 47401472 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I a score=7098.000000 s hg38.chr21_KI270874v1_alt 50961 1 + 166743 a s panTro5.chr21 3675482 1 + 33445071 a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302390 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241457 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424417 1 + 32716333 a i nomLeu3.chr25 I 3 C 0 s rheMac8.chr3 155377959 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200649 1 - 192294377 a i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8409688 1 + 21915920 a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986126 1 - 90373283 a i chlSab2.chr2 C 0 I 158 s manLeu1.NW_012102865v1 2153770 1 + 4234846 a i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160383 1 - 13750039 a i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13798844 1 + 39895921 A i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569307 1 - 6883506 A i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I a score=9285.000000 s hg38.chr21_KI270874v1_alt 50962 2 + 166743 ga s panTro5.chr21 3675483 2 + 33445071 ga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302391 2 + 46275980 ga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241458 2 - 13858734 ga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424418 2 + 32716333 gg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377960 2 - 185818997 ga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200650 2 - 192294377 ga i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8409689 2 + 21915920 ga i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012102865v1 2153771 2 + 4234846 ga i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160384 2 - 13750039 ga i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3569308 2 - 6883506 GA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I e chlSab2.chr2 14986127 158 - 90373283 I a score=15687.000000 s hg38.chr21_KI270874v1_alt 50964 4 + 166743 aaga s panTro5.chr21 3675485 4 + 33445071 aaga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302393 4 + 46275980 aaga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241460 4 - 13858734 aaga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424420 4 + 32716333 aagg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377962 4 - 185818997 aaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200652 4 - 192294377 aaga i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8409691 4 + 21915920 aaga i cerAty1.NW_012002954v1 C 0 C 0 s manLeu1.NW_012102865v1 2153773 4 + 4234846 aaga i manLeu1.NW_012102865v1 C 0 I 4871 s colAng1.NW_012120598v1 160386 4 - 13750039 aaga i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I e chlSab2.chr2 14986127 158 - 90373283 I a score=7766.000000 s hg38.chr21_KI270874v1_alt 50968 3 + 166743 gag s panTro5.chr21 3675489 3 + 33445071 gag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302397 3 + 46275980 gag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241464 3 - 13858734 aag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424424 3 + 32716333 aag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377966 3 - 185818997 aag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162200656 3 - 192294377 aag i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8409695 3 + 21915920 aag i cerAty1.NW_012002954v1 C 0 C 0 s colAng1.NW_012120598v1 160390 3 - 13750039 gag i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I e manLeu1.NW_012102865v1 2153777 4871 + 4234846 I e chlSab2.chr2 14986127 158 - 90373283 I a score=113270.000000 s hg38.chr21_KI270874v1_alt 50971 48 + 166743 agagagaggaaggaag-----ggaggaaggaaggaaggaaggaaggaaggaag s panTro5.chr21 3675492 48 + 33445071 agagagaggaaggaag-----ggaggaaggaaggaaggaaggaaggaaggaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302400 53 + 46275980 agagagaggaaggaaggaggaggaggaaggaaggaaggaaggaaggaaggaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241467 33 - 13858734 agagagaggaaggaag-----gaaggaaggaaggaagg--------------- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424427 48 + 32716333 gaaggaaggaaggaag-----gaaggaaggaaggaagggaggcaggaaggaag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155377969 47 - 185818997 aaagaaagaaagaaag-----aaagaaagaaagaaaga-aagaaagaaagaaa i rheMac8.chr3 C 0 I 8829 s macFas5.chr3 162200659 47 - 192294377 aaagaaagaaagaaag-----aaagaaagaaagaaaga-aagaaagaaagaaa i macFas5.chr3 C 0 I 1 s cerAty1.NW_012002954v1 8409698 48 + 21915920 aaagaaagaaagaaag-----aaagaaagaaagaaagagaagaaagaaagaga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986285 47 - 90373283 AGAGAGAAgaaggaag-----gaagaaggaaggaagga-aggaaggaaggaag i chlSab2.chr2 I 158 C 0 s colAng1.NW_012120598v1 160393 48 - 13750039 agagaaagaaagaaag-----agagagagggagggagggagggagggagggag i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I e manLeu1.NW_012102865v1 2153777 4871 + 4234846 I a score=6979.000000 s hg38.chr21_KI270874v1_alt 51019 3 + 166743 gaa s panTro5.chr21 3675540 3 + 33445071 gaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302453 3 + 46275980 gaa i panPan2.chr21 C 0 C 0 s nomLeu3.chr25 4424475 3 + 32716333 gaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162200707 3 - 192294377 aaa i macFas5.chr3 I 1 M 1240 s cerAty1.NW_012002954v1 8409746 3 + 21915920 gaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986332 3 - 90373283 gaa i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 160441 3 - 13750039 gaa i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I e manLeu1.NW_012102865v1 2153777 4871 + 4234846 I e rheMac8.chr3 155378016 8829 - 185818997 I e gorGor5.CYUI01015003v1 3241500 0 - 13858734 C a score=-5174.000000 s hg38.chr21_KI270874v1_alt 51022 3 + 166743 aga- s panTro5.chr21 3675543 1 + 33445071 a--- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302456 3 + 46275980 gga- i panPan2.chr21 C 0 C 0 s nomLeu3.chr25 4424478 3 + 32716333 ggg- i nomLeu3.chr25 C 0 C 0 s cerAty1.NW_012002954v1 8409749 2 + 21915920 -ag- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986335 3 - 90373283 -gga i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 160444 3 - 13750039 -gga i colAng1.NW_012120598v1 C 0 I 4 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e macNem1.NW_012019910v1 8678630 465 + 9440265 I e manLeu1.NW_012102865v1 2153777 4871 + 4234846 I e macFas5.chr3 162200710 1240 - 192294377 M e rheMac8.chr3 155378016 8829 - 185818997 I e gorGor5.CYUI01015003v1 3241500 0 - 13858734 C a score=19576.000000 s hg38.chr21_KI270874v1_alt 51025 29 + 166743 aggaaggaaggaaggaagcgaagga-------aaag s panTro5.chr21 3675544 19 + 33445071 ----------gaaggaagcgaagga-------aaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302459 29 + 46275980 aggaaggaaagaaggaagcgaagga-------aaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241500 10 - 13858734 -------------------gaagga-------aaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424481 36 + 32716333 agggagggaggcagggagggagggagggaggcaggg i nomLeu3.chr25 C 0 C 0 s macNem1.NW_012019910v1 8679095 28 + 9440265 ggaaggaagggaaggaag-gaagga-------agaa i macNem1.NW_012019910v1 I 465 C 0 s cerAty1.NW_012002954v1 8409751 4 + 21915920 --------------------------------aGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986338 24 - 90373283 ----aggaaggaaggaag-gaagga-------agga i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 160451 28 - 13750039 aggaaggaaggaaggaag-gaagga-------agga i colAng1.NW_012120598v1 I 4 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e mm10.chr16 78101677 0 + 98207768 C e manLeu1.NW_012102865v1 2153777 4871 + 4234846 I e macFas5.chr3 162200710 1240 - 192294377 M e rheMac8.chr3 155378016 8829 - 185818997 I a score=-2525.000000 s hg38.chr21_KI270874v1_alt 51054 5 + 166743 aagga s panTro5.chr21 3675563 5 + 33445071 aagga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302488 5 + 46275980 aagga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241510 5 - 13858734 aagga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424517 5 + 32716333 aggga i nomLeu3.chr25 C 0 C 0 s macNem1.NW_012019910v1 8679123 3 + 9440265 gga-- i macNem1.NW_012019910v1 C 0 I 4 s cerAty1.NW_012002954v1 8409755 3 + 21915920 agg-- i cerAty1.NW_012002954v1 C 0 I 4 s chlSab2.chr2 14986362 3 - 90373283 agg-- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 160479 3 - 13750039 agg-- i colAng1.NW_012120598v1 C 0 C 0 s mm10.chr16 78101677 5 + 98207768 GGGCA i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e manLeu1.NW_012102865v1 2153777 4871 + 4234846 I e macFas5.chr3 162200710 1240 - 192294377 M e rheMac8.chr3 155378016 8829 - 185818997 I a score=28036.000000 s hg38.chr21_KI270874v1_alt 51059 10 + 166743 aaggaaggaa s panTro5.chr21 3675568 10 + 33445071 aaggaaggaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302493 10 + 46275980 aaggaaggaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241515 10 - 13858734 aaggaaggaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424522 10 + 32716333 ggggaaggaa i nomLeu3.chr25 C 0 C 0 s macNem1.NW_012019910v1 8679130 9 + 9440265 aaggaagg-a i macNem1.NW_012019910v1 I 4 C 0 s cerAty1.NW_012002954v1 8409762 9 + 21915920 aaggaagg-a i cerAty1.NW_012002954v1 I 4 C 0 s chlSab2.chr2 14986365 9 - 90373283 aaggaagg-a i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2158648 9 + 4234846 aaggaagg-a i manLeu1.NW_012102865v1 I 4871 C 0 s colAng1.NW_012120598v1 160482 9 - 13750039 aaggaagg-a i colAng1.NW_012120598v1 C 0 C 0 s mm10.chr16 78101682 9 + 98207768 ACAGAAAG-A i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e canFam3.chr31 13798845 0 + 39895921 C e macFas5.chr3 162200710 1240 - 192294377 M e rheMac8.chr3 155378016 8829 - 185818997 I a score=17765.000000 s hg38.chr21_KI270874v1_alt 51069 3 + 166743 agg s panTro5.chr21 3675578 3 + 33445071 agg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302503 3 + 46275980 agg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241525 3 - 13858734 agg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424532 3 + 32716333 agg i nomLeu3.chr25 C 0 C 0 s macNem1.NW_012019910v1 8679139 3 + 9440265 agg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409771 3 + 21915920 agg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986374 3 - 90373283 agg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2158657 3 + 4234846 agg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160491 3 - 13750039 agg i colAng1.NW_012120598v1 C 0 C 0 s mm10.chr16 78101691 3 + 98207768 AAG i mm10.chr16 C 0 I 1 s canFam3.chr31 13798845 3 + 39895921 AGG i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e otoGar3.GL873528 20732657 1 - 38779656 I e aotNan1.NW_018487195v1 8734714 2 + 9889416 I e cebCap1.NW_016107322v1 9598120 2 - 14377064 I e saiBol1.JH378168 5021814 0 + 13128814 C e calJac3.chr21 21913913 0 + 50472720 C e macFas5.chr3 162200710 1240 - 192294377 M e rheMac8.chr3 155378016 8829 - 185818997 I a score=70420.000000 s hg38.chr21_KI270874v1_alt 51072 7 + 166743 aaggaag s panTro5.chr21 3675581 7 + 33445071 aaggaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302506 7 + 46275980 aaggaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241528 7 - 13858734 aaggaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424535 7 + 32716333 aaggaag i nomLeu3.chr25 C 0 C 0 s macNem1.NW_012019910v1 8679142 7 + 9440265 aaggaaA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409774 7 + 21915920 aaggaaA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986377 7 - 90373283 aaggaaA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2158660 7 + 4234846 aaggaag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160494 7 - 13750039 aaggaag i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913913 7 + 50472720 AAGGAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021814 7 + 13128814 AACGACA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598122 7 - 14377064 AAGGAAA i cebCap1.NW_016107322v1 I 2 C 0 s aotNan1.NW_018487195v1 8734716 7 + 9889416 AAGGAAA i aotNan1.NW_018487195v1 I 2 C 0 s otoGar3.GL873528 20732658 7 - 38779656 AAGGAGA i otoGar3.GL873528 I 1 C 0 s mm10.chr16 78101695 7 + 98207768 AAGGAGA i mm10.chr16 I 1 C 0 s canFam3.chr31 13798848 7 + 39895921 AAGGAAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e dasNov3.JH568778 3569310 0 - 6883506 C e micMur3.chr31 19170981 95 + 47401472 I e macFas5.chr3 162200710 1240 - 192294377 M e rheMac8.chr3 155378016 8829 - 185818997 I a score=39712.000000 s hg38.chr21_KI270874v1_alt 51079 5 + 166743 ATTTT s panTro5.chr21 3675588 5 + 33445071 ATTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302513 5 + 46275980 ATTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241535 5 - 13858734 ATTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424542 5 + 32716333 ATTTT i nomLeu3.chr25 C 0 C 0 s macNem1.NW_012019910v1 8679149 5 + 9440265 ATTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8409781 5 + 21915920 ATTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986384 5 - 90373283 ATTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2158667 5 + 4234846 ATTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160501 5 - 13750039 ATTGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913920 5 + 50472720 ATTAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021821 5 + 13128814 ATTAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598129 5 - 14377064 ATTAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734723 5 + 9889416 ATTAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20732665 5 - 38779656 AATTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101702 5 + 98207768 ATTTA i mm10.chr16 C 0 C 0 s canFam3.chr31 13798855 5 + 39895921 ATTTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569310 5 - 6883506 ATTTA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1060117 25 + 2694913 I e micMur3.chr31 19170981 95 + 47401472 I e macFas5.chr3 162200710 1240 - 192294377 M e rheMac8.chr3 155378016 8829 - 185818997 I a score=17290.000000 s hg38.chr21_KI270874v1_alt 51084 1 + 166743 A s panTro5.chr21 3675593 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302518 1 + 46275980 A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241540 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424547 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s macNem1.NW_012019910v1 8679154 1 + 9440265 A i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 8409786 1 + 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986389 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2158672 1 + 4234846 A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160506 1 - 13750039 A i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913925 1 + 50472720 A i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021826 1 + 13128814 A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598134 1 - 14377064 A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734728 1 + 9889416 A i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19171076 1 + 47401472 A i micMur3.chr31 I 95 C 0 s proCoq1.NW_012144079v1 1060142 1 + 2694913 A i proCoq1.NW_012144079v1 I 25 C 0 s otoGar3.GL873528 20732670 1 - 38779656 A i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101707 1 + 98207768 A i mm10.chr16 C 0 C 0 s canFam3.chr31 13798860 1 + 39895921 A i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569315 1 - 6883506 A i dasNov3.JH568778 C 0 C 0 e macFas5.chr3 162200710 1240 - 192294377 M e rheMac8.chr3 155378016 8829 - 185818997 I a score=10264237.000000 s hg38.chr21_KI270874v1_alt 51085 710 + 166743 TTTCCTCCGATT-AAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCCTCTC--------CCCCATCTGCCCACTG-----------TT---CCCTC--TTTCC-------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTCAAAGAAGGGGTGGAGTCCGAAATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAAAATTTCCAGTATTAGGGAGAG--TCACTTTGAAAAGTTGTATA----------------------TGCATGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AAC-----------------------------------------------AA-CATATCCCTGT----GTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTCTTTTTTTCTTTGTTCTGATTCTTTACTCTCTCTTACCCTCAAAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-ATTATAGT------------TTTAAGAACCAAACATAAAGTCTCCCT-TACAGCTTC-TC--TGTTTTATTAT-AAAATTATACTTGATTCAGATTTGTTTTGAAAGACCAGTT-TAC-TTTTTTTAATTAAAAAGAGGAATACAATGTC---CTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTCATTTTCTTC s panTro5.chr21 3675594 710 + 33445071 TTTCCTCTGATT-AAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCCTCTC--------CCCCATCTGCCCACTG-----------TT---CCCTC--TTTCC-------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTCAAAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAGAATTTCCAGTATTAGGGAGAG--TCACTTTGAAAAGTTGTATA----------------------TGCATGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AAC-----------------------------------------------AA-CATATCCCTGT----GTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCCAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTCTTTTTTTCTTTGTTCTGATTCTTTACTCTCTCTTACCCTCACAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-ATTATAGT------------TTTAAGAACCAAACATAATGTCTCCCT-TACAGCTTC-TC--TGTTTTATTAT-AAAATTATACTTGATTCAGATTTGTTTTGAAAGACCAGTT-TAC-TTTTTTTAATTAAAAAGAGGAATACAATGTC---TTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTCATTTTCTTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17302519 709 + 46275980 TTTCCTCTGATT-AAAAGTTGCATTTTCTTTTCTGTCTCC-TTTTTCCTTCCTCTC--------CCCCATCTGCCCACTG-----------TT---CCCTC--TTTCC-------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTCAAAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAGAATTTCCAGTATTAGGGAGAG--TCACTTTGAAAAGTTGTATA----------------------TGCATGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AAC-----------------------------------------------AA-CATATCCCTGT----GTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCTAAGCCAGGAAACTCATGGTAGATCTTCAAAAAATAACTCTACTCCCACATTTCTTTTTTTCTTTGTTCTGATTCTTTACTCTCTCTTACCCTCACAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-ATTATAGT------------TTTAAGAGCCAAACATAATGTCTCCCT-TACAGCTTC-TC--TGTTTTATTAT-AAAATTATACTTGATTCAGATTTGTTTTGAAAGACCAGTT-TAC-TTTTTTTAATTAAAAAGAGGAATACAATGTC---TTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTCATTTTCTTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3241541 713 - 13858734 TTTCTTCTGATT-AAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCCTCTC--------CCCCATCTGCCCACTG-----------TT---TCCTC--TTTCC-------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTCAAAGAAGGGG-GGAGTCTGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAGAATTTCCAGTATTAGGGAGAG--TCACTTTAAAAAGTTGTATA----------------------TGCATGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AAC-----------------------------------------------AA-CATATCCCTGT----GTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTCTTTTTTTCTTTGTTCTGATTCTTTACTCTCTCTTACCCTCACAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-ATTATAGT------------TTTAAGAACCAAACATAAAGTCTCCCT-TACAGCTTC-TC--TGTTTTATTAT-AAAATTATACTTGATTCAGATTAGTTTTGAAAGACCAGTTATAC-TTTTTTTAATTAATAAGAGGAATACAATGTCTTTTTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTCATTTTCTTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4424548 720 + 32716333 TTTACTCTGATT-AAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCATCCTCTC--------CCCCATCTGCCC--------------------------------------------------------------------------ACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTCAGAAGCCAAGAATTTCCAGTATTAGGGAGAG--TCACTTTGAAAAGTTGTATA----------------------TGCATGTGTGCGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AACA---A---CTTGTCAGCCAGAGCAACAATTATTTCTCCCAAACTTAAAA-CATATCCCTGT----GTAAGCTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATCTCTTGTTTTCTTTGTTCTGATTCTTTGCTCTCTCTTACCCTCACAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-AGTATAG-------------TTTAAGAACCAAACATAAAGTCTCCCT-TACAGCTTC-TC--TGTTTTATTAT-AAAATTATACTTGATTCAGATTTGTTTTGAAAGACCAGTTATAC--TTTTTTAATTAAAAAGAGGAATACAATGTCTTTTTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTTTTTC i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162201951 742 - 192294377 TTTCCTCTGATT-GAAAGTCGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCCTTTC--------CCCCATCTTCCCTCTG-----------TT---CCCTC--TTTCC-------------------------TTTTCTCCATTTGTATGACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAG--TCACTTTGAAAAGCTCTATA----------------------TGCACGTCTGTGCGCATG-------------TCTGGCTTAACAAGAAA-AACTG----AACAACAA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGT----ATAAGTTGTGGTTCTTCTTTGGTTTCAGTGTTCATTTATTTCAGTTGATTGTTTGACATCTCCTACTAGCTAAGCCAGGAAACTGATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTCTCTCTTGCCCTCATAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-AGTATGGT------------TTTAAGAACCACACAAAAAGTCTCCTT-AAAAG-CTC-TC--CATTTTATTAT-AAAATTATACTTGATTCAGCCTTGTTTTGAAAGACCTTTTACAC-TATTTTTAATTAAAAAGAGGAATACAATGTCCTTTTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTT-TTC i macFas5.chr3 M 1240 C 0 s macNem1.NW_012019910v1 8679156 755 + 9440265 TTCCCTCTGATTGGAAAGTCGCATTTTCTTTTCTGTCTCCTTTTTTCcttcctctc--------ccccatcttccctctg-----------tt---ccctc--tttcc-------------------------ttttcTCCATTTGTATGACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAG--TCACTTTGAAAAGCTCTATA----------------------TGCACGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AACAACAA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGT----GTAAGTTGTGGTTCTTCTTTGGTTTCAGTGTTCATTTATTTCAGTTGATTGTTTGACATCTCCTACTAGCTAAGCCAGGAAACTGATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTCTCTCTTGCCCTCATAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-AGTATGGT------------TTTAAGAACCACACAAAAAGTCTCCTT-AAAAG-CTC-TC--CATTTTATTAT--AAATTATACTTGATTCAGCCTTGTTTTGAAAGACCTTTTACAC-TATTTTTAATTAAAAAGAGGAATACAATGTCCTTTTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTT-TTC i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 8409787 756 + 21915920 TTTCCTCTGATT-GAAAGTCGCATTTTCTTTTCTGTCTCCTTTTTTCcttcctctc--------ccccatcttccctctg-----------tt---ccctc--tttcc-------------------------ttttcTCCATTTGTATGAGAGTGGCACTGATTCAGAGAAGGGGTAGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAG--TCACTTTGAAAAGCTCTATA----------------------TGCACGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AACAACAA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGT----GTAAGTTGTGGTTCTTCTTTGGTTTCAGTGTTCATTTATTTCAGTTGATTGTTTGACATCTCCTACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTCTCTCTTGCCCTCATAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-AGTATGGT------------TTTAAGAACCACACATAAAGTCTCCCT-TACAGCCTC-TC--CATTGTATTAT-AAAATTATACTTGATTCAGCCTTGTTTTGAAAGACCTTTTACAC-TATTTTTAATTAAAAAGAGGAATACAATGTCCTTTTT-TCCATAAGTAGACTCACAAAGAAGGGAGGAGTTATTTT-TTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14986390 754 - 90373283 TTTCCTCTTATT-GAAAGCCGCATTTTCTTTTCTGTCTCCTTTTTTCcttcctctc--------ccccatcttccctctg-----------tt---ccctc--tttcc-------------------------ttttcTCCATTTGTATGACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCCAATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAG--TCACTTTGAAAAGCTCTATA----------------------TGCACGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AACAACGA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTAT----GTAAGTTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACGTCTCCTACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTTTCTCTTGCCCTCATGAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-AGTATGGT------------TTTAAGAACCACACATAAAGTCTCCCT-TACAGC--C-TC--CATTTTATTAT-AAAATTATACTTGATTCAGCCTTGTTTTGAAAGACCTTTTACAC-TATTTTTAATTAAAAAGAGGAATACAATGTCCTTTTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTT-TTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2158673 756 + 4234846 TTTCCTCTGATT-GAAAGTCACATTTTCTTTTCTGTCTCCTTTTTTCcttcctctc--------ccccatcttccctctg-----------tt---ccctc--tttcc-------------------------ttttcTCCATTTGTATGAGAGTGGCACTGATTCAGAGAAGGGGTAGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAG--TCACTTTGAAAAGCTCTATA----------------------TGCACGTCTGTGTGCATGTCAATATATTTGCTCTGGCTTAACAAGAAA-AACTG----AACAACAA---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGT----GTAAGTTGTGGTTCTTCTTTGGTTTCAGTGTTCATTTATTTCAGTTGATTGTTTGACATCTCCTACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTCTCTCTTGCCCTCATAAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-AGTATGGT------------TTTAAGAACCACACATAAAGTCTCCCT-TACAGCCTC-TC--CATTTTATTAT-AAAATTATACTTGATTCAGCCTTGTTTTGAAAGGCCTTTTACAC-TATTTTTAATTAAAAAGAGGAATACAATGTCTTTTTT-TCCATAAGTAGACTCACAAAGAAGGGAGGAGTTATTTT-TTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 160507 751 - 13750039 TATCCTCTGATT-AAAACTTGCATTTTCTTT--TGTCTCCTTTTTTCcttcctctc--------ccccatcttccctctg-----------tt---ccctc--tttcc-------------------------ttttcTCCGTTTGTATAACAGTGGCACTGATTCAGAGAAGGAGTGGAGTCCGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCCTAAATTGGTCAGAAGCCAAGAATTTCCAGTTTTAGGGAGAG--TCACTTTG-AAAGCTCTATA----------------------TGCATGTCTGTGTGCATGTCAATATATTTTCTCTGGCTTAACAAGAAA-AACTG----AACA---A---CTTGTCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTGT----GTAAGTTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCTACTAGCTAAGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTATTTACTCTCTCTTGCCCTCATGAAGTTTAATGAAACAAGTGTTCAGG----------GAAAGATAGTATTTGCTTATTGTATCTT-AGTATGGT------------TTTAAGAACCACATATAAAGTCTCCCT-TACAGCCTC-TC--CATTTTATTAT-AAAATTATACTTGATTCAGCCTTGTTTTGAAAGACCTTTTACACTTTTTTTTAATTACAAAGAGGAATACAATGTCTTTTTT-TCCATAAGTAGACTCACAAAGAAGGTAGGAGTTATTTT-TTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21913926 755 + 50472720 TTTCCTCTGGTT-AAAAGTTGCATTTTCTTT--TGTCTCCTTTTTTCCTTCTTCTC--------CCTCAGCTGCCCTCTG-----------TT---CCCTCTTTTTTT-------------------------TTTTCTCCATGTATATGACAGTGGCCCTGATTCAAAGAGGAGGTGGAGTCTGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAACTGGTAAGAAGCCAAGAATTTCCAGTATTAGGGAGAG--TCACTTTGAAAAGCTGTATA----------------------TGTATGTCTGTGTGCGTGTCAATATATTTGCTCTGGCTTCATAAGAAA-AACTG----AACAACAA---CTTATCAGCCAAAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTTT----GTAAATTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTTCCACTAGCTATGCCAGGAAACTCATGGCAGATCGTCAAAAAATAACTCCACTCCCACATTTATT-TTTCCTTTGTTCTGATTCTTTACTCTCTC-TACTCTCAGGAAGTTTAATGAAACAAGTCTTCAGG----------AAAAGATACTATTTGCTTCTTGTATCTT-AGTATAGT------------TTTAGGAACCATACATAAAGTGTCCCT-CCCAGCTTC-TC--CTTTTTATTAT-AAAATTATGCTTAATTCAGATTTATTTTGAAAGA-CAGTTGTAC-TTTTTTTAATTAAAAGACGAAATTTATTGTCTTTTTTTTCCATAAGTAGACTCACAAAGAATGTCGGAGTTATTTC-TTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5021827 754 + 13128814 TTTCCTCTGATT-AAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCTTCTC--------CCTCAGCTGCCCTCTG-----------CT---CCCTC--TTTCC-------------------------TTTTCTCCATTTGTATGACAGTGGCCCTGGTTCAAAGAAGGGGTGGAGTCTGATACTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTTTCCTTAAATTGGTAAGAAGCCAAGAATTTCCAGTATTAGGGAGAG--TCACTTTGAAAAGCTGTATA----------------------TGTATGTGTGCGTGCGTGTCAATATATTTGCTCTGGTTTCATAAAAAA-AACTG----AACAACAA---CTCATCAGCCAAAGCAACAACTATTTCTCCCAAACTTAAAA-CATATTCCTTT----GTAAATTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTTCCACTAGCTATGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTCTTTACTCTCTC-TACTCTTAGGAAGTTTAATTAAACAAGTGTTCAGG----------AAAAGATACTATTTGCTTATTGTATCTT-AGTATAGT------------TTTAGGAACCATACATAAAGTCTCCCT-CACAGCTTCTTC--CTTTTTATTAT-AAAATTATGCTTGATTCAGATTTGTTTTGAAAGACCAGTTGTAC-TTTTTTTAATTAAAAGGAGGAATTTTATGTCTTTTTT---CATAAGCAGACTCACAAAGAATGTAGGAGTTATTTC-TTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598135 756 - 14377064 TTTCCTCTGATT-AAAAGCTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCTTCTC--------CCTCAGCTGCCCTCTG-----------TT---CCCTC--TTTCC-------------------------TTTTCTCCATTTGTATGACAGTGGCCCTGATTCAAAGAAGGGGCGGAGTCTGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTAAGAAGCCAAGAATTTCCAGTATTAGGGAGAG--TCACTTTGAAAAGCTGTATA----------------------TGTATGTCTGTGTGCGTGTCAATATATTTGCTCTGGCTTCATAAGAAA-AACTG----AACAACAA---CTCATCAGCCAAAGCAACAACGATTTCTCCCAAACTTAAAA-CATATTCCTTT----GTAAATTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTTCCACTAGCTATGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACATTTATT-TTTTCTTTGTTCTGATTCTTTACTCTCCC-TACTCTCAGGAAGTGTAATGAAACAAGTGTTCAGG----------AAAAGATACTATTTGCTTATTGTATCTT-AGCATAGT------------TTTAGGAACCATACATAAAGTCTCCCT-CACAGCTTC-TC--CTTTTTATTAT-AAAATTATGCTTGATTCAGATTTGTTTTGAAAGACCAGTTGTACTTTTTTTTAATTAAAAGGAGGAATTTCATGTCTTTTTT-TCCATAAGCAGACTCACAAAGAATGTAGGAGTTATTTC-TTC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8734729 751 + 9889416 TTTCTTCTGATT-AAAAGTTGCATTTTCTTTTCTGTCTCCTTTTTTCCTTCTTCTC--------CCTCAGCTGCCCTCTG-----------TT---CCCTC--TTTCC-------------------------TTTTCTCCATTTGTATGACAGTGGCCCTGATTCAAAGAAGGGGTGGAGTCTGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAAATTGGTAAGAAGCCAAGAATTTCCAGTATTAGGGAGAG--TCACTTTGAAAAGCTGTATA----------------------TGTATGTCTGCGTGCATGTCAATATATTTGCTCTGGCTTCATAAGAAA-AACTG----AACAACAA---CTCATCAGCCAAAGCAACAACTATTTCTCCCAAACTTAAAA-CATATCCCTTT----GTAAATTGTGGTTCTTATTTGGTTTCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTTCCACTAGCTATGCCAGGAAACTCATGGCAGATCTTCAAAAAATAACTCCACTCCCACACTTATT-TTTTCTTTGTTCTGATTCTTTACTCTCTC-TACTCTCAGGAAGTTTAATGAAACAAGTGTTCAGG----------AAAAGATACTATTTGCTTATTGTATCTT-AGTATAGT------------TTTAGGAACCATACATAAAGTCTCCCT-CGCAGCTTC-TC--CTTTTTATTAT-AAAATTATGCTTGATTCAGATTTGTTTTGAAAGACCAGTTGTAC-----TTTAATTAAATGGAGGAATTTAATGTCTTTTTT-TCCATAAGCAGACTCACAAAGAATGTAGGAGTTATTTC-TTC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19171077 748 + 47401472 TTTCCTCTGATG-AAAAGTTGCATTTT-TTTTCTGTATCCTTTTTTCCTTCCTCTC--------CCCCATCTGCCCTCCACTGCA------TT---TCCCC--CTCCC-------------------------TTTTTTCCATTTGTATGACAGTGGCACTGATTCAGAGAAGGGGTGGAGTCTGATATTTTGGGTGGTCTCAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAGATTGGAAAGTAGCCACGAATTTCCAATATTAGGGAGAG--TCACTTTG-AAAGCTGTATA----------------------TGTATGTCTGGGTGCATATGAATATATTTGCTCTGGCTTAATAAGAAA-AATTG-------AACAA---CTTGTCAGCCAAAGCAA---CTATTTCTCCCAAACTTAAAA-CATATCTTTGTGTGAGTAAGTTATGGTTCTTATTTGGTTGCAGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTGGCTGAGCCAGGAAACTCATGGCAGTTCTTCAAA-ATTAACTCCACTCCCACATTTATTTTTTTCTTTATTCTGATTCTTTACTCTCCTTTTCCCTCACAAAGTTTCATGGAACAAGTACTCAGG----------AAAAGATGGTCTTTGCTTTTTGTATCTA-AGTGTAG------------------GAACCAGACACCAAATCTCTCT-TACTATTTC-TT---TTTTTATTAT-AAAATTATATTAGCCTCAGATTTGTTTTAAAAGACCAGTGATAC--TTTTTTAATTAAAGGGAGAAGTAAAATGTTCT-TTT-CCCATAAACAAACTCACAAAGAATGTAGGAGTTATTTT-TTT i micMur3.chr31 C 0 I 198 s proCoq1.NW_012144079v1 1060143 751 + 2694913 TTTCCTCTGATT-AAAAGTTGCATTTTCTTTTCTGTATCC-TTTTTCCTTCCTCTC--------CCCCATCTGCCCTCCACTCCA------TT---ACCCT--CTCCC-------------------------TTTTTTCCATTTGTATGACGGTGGCACTGATTCAGAGAAGGGGTGAAGTCTGATATTTTGGGTGGTCTCAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAGATTGGAAAGTAGCCAAGAATTTCCAATATTAGGGAGAG--TCACTTTGAAAAGCTGTGTA----------------------TGTATGTCTGGGTGTATATGAATATATTTGCTCTGGCTTAATAAGAAA-AATTG-------AACAA---CTTGTCAGCCAAAGCAA---CTATTTCTCCCAAACTTAAAA-CATATCCTTGTGTGAGTAAGTTATGGTTCTTATTTGGTTGCAGTGCTCATTTATTTCAGTTTATTGTTTGACATCTCCCACTGGCTGAGCCAGGAAACTCATGGCAGTTCTTCAAG-ATTAATTCCATTCCCACATTTATTTTTTTCTTTATTCTGATTCTTTACCCTCCCTTACCCTCACAAAGTTTCATGGAACAAGTACTCAGG----------AAAAGATGGTCTTTGCTTTTTGTATCTA-AGTGTAG------------------GAACCAGACACCAAATCTCTCT-TACTACTGC-TT-CCTTTTTATTAT-AAAATTATATTAGTTTAAGATTTGTTTTGAAAGACCAGTGGTAC--TTTTTTAATTAAAGGGAGAAGTAAAATGTTCT-TGT-CCCATAAGCAAACTCACAAAGAATGTAGGAGTGATTTT-TCT i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20732671 781 - 38779656 TTTCCTCGGATT-AAAAGTTGCATTTCCTTTTCTGTGTCCTTTAGTCCTTCCTCTC--------CCTCATCTGCCCTCCACTCCACTCCATTC---CCCCC--AACCC-------------------------TTTTCTCTATGTGTATGACAGTGGCACTGAGTCA-AAAAGAGGTGGAGTCTGATATTTTGGGTGGTCTTAGTAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAGACTGGAAAGTAGCCAAGAATTTCCACTATTGGGGAGAG--TCACTTTGAAAAGTtatatatatatatatatatatgtttatgtatatGTCTGGGTGAATGTGAATACATTTGCTGCGGTTTAATAAGAAA-AATTG----AACAACAA---CTTGTCAGCCAAAGCAACAGCTATTTCTCCCAAACTCAAAA-CACATCCTTGT----GTAAGTTATGTTTCTTATTTGGTTGCAATGTTCATTTATTTCAGTTTATTGTTTGACATCTTCCACTGGCTGAGCCAAGAAACTCATGGCAGTTCTTCAAATAATAACCACACTCCTGCATT--TTTTTTTCTTTATTCAGATTCCTCACTCTTTCTTACCCTCACAAAGTTTCATGAAACAAGTACTCAGG----------AAAAGATAGTATTTGCTTTTTGTATCTA-AGTGTAG------------------GAAGCATGCACAAAATCTCTCT-TACTGtttt-tttcttttttattat-aaaattatattaGATTCAGATTTGTTTTGAAAGACAAGAGGTAC--TTTCTTCATTAAAGAAAGAAGTAAAATCTCTC-TTT-CCCATAAGCAAATTTGCAAAGAATGTAGGAGCTACTTC-TCT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78101708 774 + 98207768 TTTCCTCTGATT-AAAAGTTGCGTTTTCTTTTCTGTCTC--TTTCTTCTTTCTCCC--------TGCCATCTGTCTTCCACATC-------GT---CCGTC--GTCCCCACCCCTACCCCTGGCCCCC-TGAGTTTTCTCTATTTGTACCCGGGTGGCTGAGATCCAGAAGAAAGGTGGAGTCTCATCGTTTGGGTGGTCCGAGTAAATCTTTAGTCTTTGGCTAACCTCTCCTTAGACTGGAAAGTGGCCAAGAATTTGCAGTGTTAGGGAGAG--TCACTTTGAAAGGCTGCAAA---------------------GCGTCCATCTGGGTGCATGTCAATACAGTTTCCCTGGTTTAGTAAAAAAGAAGGG----AACAGAAA---CTTTCCAGCCAGAGCAACAACTATTTCTCCCAAACTTAAAAGTGCACCCTTGT----ATAAGCTGTGCTTCTTA-CCAGTTATAATGTCCCTTTATTTCAGTTTACGGCTTGACCCCTCCTGCTAGCTGAGCCAACAAACTCGT----CATTCTAAAGAAACTACTCCAC-CCGACATGTA---TTCTCTTTGTTCAGATTCTCTACTCTCTCTTGCCCTCACAACATTTCATTAAATGCAGGCTCAGG-----------ACAGATCGGATTTGCTTTTTGTATCTC-AGTATAAA------------TTTAGGAACATCA----AAATCTCTCTCCACGGCACC-TC--CTCTTTATTAT-AACATTAAATTAGGTTCGGGTTCATTCTGAAAGACCAGTTGTATTTCTTTTTAATTAAAAGGAGAAATAAAATCTCCTTTTT-TCTATAAGTAGGTTCACAAAGAATGCAGGAGTTATTTC-TCC i mm10.chr16 C 0 C 0 s canFam3.chr31 13798861 756 + 39895921 TGTCATCTGATG-AAAAATTGCATTTTCTT--CTGCCTCTCTTTCCTGTTCCTCTC--------TCCCATCTGCCCTCCA-----------CTTCACCCTC--CATCC-----------------CTT-TAAGTTTTCTCCATTTGTATTACAGTGGCACAGATTCAGAGGAGGGGTGGAGTCTGACATTTCGGGTGGTCTTAATAAAGCTTTAGTCTTTGGCTAACCTCTCCTTAGACTGGAGAGTAGCCAAGAATTTCCAATATTAGGAAGAG--TCACTTTGAAAAACTGTGTA----------------------TGTATGTCGAAGTGCATGTCAATATATTTGTTCTGATTTAATAAGCAA-AACTG----AACAACAGGGCCCTGTCAGCCAAAGCAACAACTATTTCTCCCAAACTTAAAA-CACATCCTTGT----GTAAGTTATGGTTCTTATTTGGTTTTTGTGTTCATTTATTTCAGTTTATTGTTTGACATCTCCTACCAGCTGAGCCAGGAAACCCATGGCAGTGCTTCAAAAAATAACTCCAC-CCCACATTTATTTTTTAATTTGCTCTGGTTCTTTACTCTTT--TAAATTCACAAAGTTTCATGGAACAAGTGCCTAAA----------GA-AGATAGCATTTGCTTTTTA-------AGTATAGT------------TTTAGAAACCATATGTAAAATATCTCT-TGCAGCTCC-TC--TTTTTTATTAGAAAAATTATATTAGATTCATATTTGTTTTGAAAAGTCAGTTGTAT---ACTTTAATTAAAGGGAGAAATAAAAAGTCTTCTTT-CCTA-AAGCAAGCTTACAAAGAATGGAGAAGTTATTTC-TCC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3569316 788 - 6883506 TTTCATTTGATT-AAGTGTTGAGtctccttttctctctcc--tttaccttcctctcccctctctccccatctgccctcca-----------tt---ccccc--gaccc------------tatccctTGTACGTTTTCTCCATTTGTATTATGGTGGCAGGGATTCAGAAAAGGGATGGAGTCTGATTTTTTGGGTGGTCGTAGTAAAGCCTTAGTCTTTGGCTAACCTCTCCTTAG-TTGGAAATTAGCCAAGAATTTCCAATATTAGGAAGAGAAGCACTTTGAAAAGCTGTATT---------------------TTGCATGTCTGGGTGCATGTCAACATATTAATTCTGTTTTAA-ATGAAA-GACTGTTTCGGC--------CTTGTCAGCCAAAACAACAACTATTTTTCCCAAACTTAAAA-TACATCTCTATGTGAATAAGTAATGGTTCTTACTTGGTTTCAGAGTTCATTTATTTTAGTTTATTGTTTGACATCTCCCATTAGCTGAGTCAGAAAACTCGTGGAAGTGTTTCATAAAATAACTCCACTCCCACATGTATT-CTTTATTTTTTCTGACGCTTTTCTTTCTCTTACCTTCACTAAGTTTCATAGAACAAGTGCTCAAAATGAACTTTCAAAAAATAGTGTTTGCTCTTAGTATCTCAAAAATAGTGTTTGCTCTTAGTTTAGAAACCACACATTAAACCTCCCT-CATAGCTTC-TT--Ctttttattat-ataataatattGCATTCAAATTTGTTTTGAAAGGCCAATG-TAT-TTTTTTTA------------AATAAGCTGTTCT-TTT-TCCTTTAGCAGACTCACAAAAAAAGCAAAGTTTATTTC-TCC i dasNov3.JH568778 C 0 C 0 e rheMac8.chr3 155378016 8829 - 185818997 I a score=19139.000000 s hg38.chr21_KI270874v1_alt 51795 2 + 166743 CA- s panTro5.chr21 3676304 2 + 33445071 CA- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303228 2 + 46275980 CA- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242254 2 - 13858734 CA- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425268 2 + 32716333 CA- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162202693 2 - 192294377 CA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8679911 2 + 9440265 CA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410543 2 + 21915920 CA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987144 2 - 90373283 CA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159429 2 + 4234846 CA- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161258 2 - 13750039 CA- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21914681 2 + 50472720 CA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5022581 2 + 13128814 CA- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598891 2 - 14377064 CA- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735480 2 + 9889416 CA- i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1060895 1 + 2694913 -A- i proCoq1.NW_012144079v1 I 1 I 67 s otoGar3.GL873528 20733452 2 - 38779656 TA- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78102482 2 + 98207768 CA- i mm10.chr16 C 0 C 0 s canFam3.chr31 13799617 2 + 39895921 TA- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570104 2 - 6883506 -AA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19171825 198 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=561599.000000 s hg38.chr21_KI270874v1_alt 51797 59 + 166743 TTAATGTCACAACAAAACAGTCTTACATACTCTGAATTGGAGTGAAAATTAGAG---AAATA s panTro5.chr21 3676306 59 + 33445071 TTAATGTCTCAACAAAACAGTCTTACATACTCTGAATTGGAGTGAAAATTAGAG---AAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303230 59 + 46275980 TTAATGTCTCAACAAAACAGTCTTACGTACTCTGAATTGGAGTGAAAATTAGAG---AAATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242256 59 - 13858734 TTAATGTCTCAACAAAACAGTCTTACATACTCTGGATTGGAGTGAAAATTAGAG---AAATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425270 59 + 32716333 TTAATGCCTTAACAAAACAGTCTTACATACTCTGAATTGGAGTGAAAATTAGAG---AAATA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162202695 60 - 192294377 TTCATGTCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGAAAATTAGAGG--AAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8679913 60 + 9440265 TTAACGTCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGAAAATTAGAGG--AAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410545 59 + 21915920 TTAATGTCTTAACAAAACAGTCTTATATCTTCTGAATTAGAGTGAAAATTAGAGG---AAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987146 60 - 90373283 TTAATGTCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGAAAATTAGAGA--AAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159431 59 + 4234846 TTAATGTCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGAAAATTAGAG---GAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161260 59 - 13750039 TTAATATCTTAACAAAACAGTCTTACATCTTCTGAATTAGAGTGAAAATTAGAG---AAAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21914683 59 + 50472720 TTAATGTCTTAACAAA--AGTCTTACATTCTCTGAATTAGAGTGAAAATTAGAGGG-AAAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5022583 59 + 13128814 TTAATGTATTAACAAA--ATTCTTACATTATCTGAATTAGAGTGAAAATTAAAGGG-AAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598893 60 - 14377064 TTAATGTCTTAGCAAA--AGTCTTACATTCTCTGAATTGGAGTGAAAATTAGAGGGAAAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735482 59 + 9889416 TTAATGTCTTAACAAA--AGTCTTACATTCTCTGAATTAGAGTGAAGATTAGAGGG-AAAAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20733454 56 - 38779656 ACAGTGATTTAGCAAG--AGTTTTAAGT-CTCTGAGACAAGGCAAAGATTAAAG---GAGTG i otoGar3.GL873528 C 0 I 4 s mm10.chr16 78102484 59 + 98207768 ATAATAACTTAACAAAAGAGATTTAAATCCTCTGAATTAGAGGGAGGATTAGAG---AGGGA i mm10.chr16 C 0 I 1 s canFam3.chr31 13799619 59 + 39895921 ATAATGACTTAACAAATGAGATTTCAGTTCCCTAAATTGGGGTAAAGATTAGGA---AGAAA i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3570106 62 - 6883506 ACAATGACATAACAAAAAAAGTTTGGGTCCCCTGAATTACAGTGAAGATTAGAGGGGGAAAA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1060896 67 + 2694913 I e micMur3.chr31 19171825 198 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=332398.000000 s hg38.chr21_KI270874v1_alt 51856 28 + 166743 AATCACCTGC-ATGATGAGCATACATTAT s panTro5.chr21 3676365 28 + 33445071 AATCACCTGC-ATGATGAGCATACATTAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303289 28 + 46275980 AATCACCTGC-ATGATGAGCATACATTAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242315 28 - 13858734 AATCACCTGC-ATGATGAGCATACATTAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425329 28 + 32716333 AATCACCTGC-ATGATGAGTATACATTAT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162202755 28 - 192294377 AACCACCTCC-ATGATGAGCATACATTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8679973 28 + 9440265 AACCACCTCC-ATGATGAGCATACATTAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410604 28 + 21915920 AACCACCTCC-ATGATGAGCATACATTAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987206 28 - 90373283 AATCACCTCC-ATGATGAGCATACATTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159490 28 + 4234846 AACCACCTCC-ATGATGAGCATACATTAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161319 28 - 13750039 AATCGCCTCC-ATGATGAGCATACATTAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21914742 29 + 50472720 AATCACCTACAATAGTGAGCATACATTAA i calJac3.chr21 C 0 I 328 s saiBol1.JH378168 5022642 28 + 13128814 AATCACCTGC-ATAATGAGCATACATTAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598953 28 - 14377064 AATCACCTGC-ATAATGAGCACACATTAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735541 28 + 9889416 AATCACCTGC-ATAATGAGCATACATTAA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1060963 28 + 2694913 GAGCCTCTGT-ACGTTGAGCATACATTAT i proCoq1.NW_012144079v1 I 67 C 0 s otoGar3.GL873528 20733514 28 - 38779656 GAACCTCTGC-ACTTGGAGCGTACATTAC i otoGar3.GL873528 I 4 C 0 s mm10.chr16 78102544 28 + 98207768 AGTCACCTGC-GTAGTTCGAATACATTAT i mm10.chr16 I 1 C 0 s canFam3.chr31 13799679 28 + 39895921 AACTATCTGT-ACTGTGATCATATATTAT i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3570168 27 - 6883506 AATCACAAGC-ATG-TGAGCATACATTAT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19171825 198 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=1049989.000000 s hg38.chr21_KI270874v1_alt 51884 95 + 166743 CATGGAATTTTTAAAGGCCTCATCTTTTGGGTACCTGGCAATAACTAAGCAAAAATAACCAACAGGGT-----AAAAAA-----A--TGCC---------------------ACCATCATTTCAATGA s panTro5.chr21 3676393 95 + 33445071 CATGGAATTTTAAAAGGCCTCATCTTTTGGGTACCTGGCAATAACTTAGCAAAAATAACCAACAGGGT-----AAAAAA-----A--TGCC---------------------ACCATCATTTCAATGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303317 95 + 46275980 CATGGAATTTTAAAAGGCCTCATCTTTTGGGTACCTGGCAATAACTTAGCAAAAATAACCAACAGGGT-----AAAAAA-----A--TGCC---------------------ACCATCATTTCAATGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242343 95 - 13858734 CATGGAATTTTAAAAGGCCTCATCTTTTGGGTACCTGGCAATAACTTAGCAAAAATAACCAACAGGGT-----AAAAAA-----A--TGCC---------------------ACCATCATTTCAATGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425357 100 + 32716333 CATGGAATTTTAAATGGCCTCATCTTTTGGGTACCTGGAAATATTTAGTAAAAAATAACCAACAGGGTAAAAAAAAAAA-----A--TGCC---------------------AACATCATTTCAATGA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162202783 95 - 192294377 CATGGAATTTTAAAAGGCCTTATCTTTTGGGTACCTGGCAATA-CTTAGCAAAAATAACCAACAGGGT-----AAAAAA----GA--TGTC---------------------AACATCATTTCAATGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680001 95 + 9440265 CATGGAATTTTAAAAGGCCTTATCTTTTGGGTACCTGGCAATA-CTTAGCAAAAATAACCAACAGGGT-----AAAAAA----GA--TGTC---------------------AACATCATTTCAATGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410632 95 + 21915920 CATGGAATTTTAAAAGGCCTTATCTTTTGGGTACCTGGCAATA-CTCAGCAAAAATAACCAACAGGGT-----AAAAAA----GA--TGTC---------------------AACATCATTTCAATGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987234 95 - 90373283 CATGGAATTTTAAAAGGCCTTATCTTCTGGGTACCTGGCAATA-CTTAGCAAAAATAACTAACAGGGT-----AAAAAA----GA--TGTC---------------------AACATCATTTCAATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159518 95 + 4234846 CATGGAATTTTAAAAGGCCTTATCTTTTGGGTACCTGGCAATA-CTCAGCAAAAATAACCAACAGGGT-----AAAAAA----GA--TGTC---------------------AACATCATTTCAATGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161347 95 - 13750039 CATGGAATTTTAAAAGGCCTTATCTTTTGGGTACCTGGCAATA-CTTAGCAAAAATAACCAACAGAGT-----AAAAAA----GA--TGCC---------------------AACATCATTTCAATGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915099 93 + 50472720 CAAGAAATTTCAAAAGGCCTCATCTTTTGGGTACCTGACAATA-CTTAGT-AAAATAACCACCAGGGA-----AAAAAG-----A--TTCC---------------------AACGTCATTTTAATGC i calJac3.chr21 I 328 C 0 s saiBol1.JH378168 5022670 94 + 13128814 CAAGAAATTTTAAAAGGCCTCATCTTTTGGGTATCTGGTAAAA-CTTAGTAAAAATAACCACCAGGGA-----AAAAAG-----A--TTCC---------------------AACATCATTTCAACGC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9598981 94 - 14377064 CAAGAAATTTTAAAAGGCCTCATCTTTTGGGTACCTGGCAGCA-CTTAGTAAAAATAACCACCAGGGA-----AAAAAG-----A--TTAC---------------------AACATCATTTCAATGC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735569 93 + 9889416 CAAGAAATTTTAAAAGGCCTCATCTTTTGGGTACTTGGCAATA-CTTAGTAAAAATAACCACCA-GGA-----AAAAAG-----A--TTCC---------------------AACATCATTTCAATGC i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1060991 95 + 2694913 CATGGAATTTGAAAGAGCCTTATCTTTTTGGTACCTGGCAACA-CCTAGTAAACACAACCACAAGGGT-----AAAAAA----GA--TGCC---------------------AACATCATTTCAACAA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20733542 95 - 38779656 CATGGAATTGGAAAGAGTCTTATCTTTTTGGTCCCTGGAAACA-CCTAGTAAAAATAACCATAAGGGT-----AGAAAA----GA--GGCC---------------------ATCATCATTTCAACAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78102572 93 + 98207768 CACAATTATTGAAGGGGATGTATCTTTT-GGTACCTGGCAAAA-GTTAATAAAAATACCCACAAAGGT-----AACAAT----GA--TGT----------------------AGTGTCACTTCAGTGA i mm10.chr16 C 0 C 0 s canFam3.chr31 13799707 119 + 39895921 CACGGACTTTGAAAATGCCT-ATCTTTTTGGTACTTGGCAACA-TATAGTAAGAATAGCCACAAGGGA-----AAAAAAAAAAAA--AgcccggggcgggggggggggggggcACATTATTTCCACAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570195 95 - 6883506 CATG-AATATGAAGTGGCCTTATCTTTTCAGTGCCTGGCAACA-CTTAGTAAAAATATACTCAAGGGT-----AAAAAA-----ATTTACC---------------------AACATCATTTCAAGGA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19171825 198 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=1605763.000000 s hg38.chr21_KI270874v1_alt 51979 108 + 166743 AAATAA-CCAAACTGCTCCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGAAAAGTTTAAACA s panTro5.chr21 3676488 108 + 33445071 AAATAA-CCAAACTGCTCCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGAAAAGTTTGAACA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303412 108 + 46275980 AAATAA-CCAAACTGCTCCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGAAAAGTTTGAACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242438 108 - 13858734 AAATAA-TCAAACTGCTGCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAGCCTTGCA-TC------AAAGGAAAGTTTGAACA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425457 108 + 32716333 AAATAA-CCAAACTGCTGCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCACTGGTGCATGTCTGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGGAAAGTTTGAACA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162202878 108 - 192294377 AAATAG-CCAAACTGCTGCCAGAAAACAAAGTAGCAGATCCATTTAGGCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGGAAAGTTTGAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680096 108 + 9440265 AAATAG-CCAAACTGCTGCCAGAAAACAAAGTAGCAGATCCATTTAGCCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGGAAAGTTTGAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410727 108 + 21915920 AAATAG-CCAAACTGCTGCCAGAAAACAAAGTGGCAGATCCATTTAGGCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGGAAAGTTTGAACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987329 108 - 90373283 AAATAG-CCAAACTGCTGCCAGAAAACAAAGTAGCAGATCCATTTAGGCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGGAAAGTTTGAACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159613 108 + 4234846 AAATAG-CCAAACTGCTGCCAGAAAACAAAGTAGCAGATCCATTTAGGCTCATTGGTGCATGTCGGGAACTTTCCAAATGAAACCTTGCA-TC------AAAGGAAAGTTTGAACA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161442 108 - 13750039 AAATAG-CCAAACTGCTGCCAGAAAACAAAGTAGCAGATCCATTCAGGCTCATTGGTGCATGTCGGGAACTTTCCAAACGAAACCTTGCA-TC------AAAGGAAACTTTGAACA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915192 105 + 50472720 AAATAG-TCAAACGGCTGCCAGAAAACAAAGCAGCAAATCCATTTAGGCTCA-TGGTTCATGTCCGGAACTTTCCAAATGACAC--TGCA-TC------AAAGGAAAGTTTGAACA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5022764 106 + 13128814 AAATAG-TCAAATGGCTACCAGAAAATAAAGTAGCAAATCCATTTAGGCTCAGTGGTTCATGTCTGGAACTTTCCAAATGAAAC--TGCA-TC------AAAGGAAAGTTTGAACA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599075 106 - 14377064 AAATAG-TCAAATGGCTACCAGAAAACAAAGTAGCAAATCCATTTAGGCTCGATGGTTCATGTCTGGAACTTTCCAAATGAAAC--TGCA-TC------AAAGGAAAGTTTGAACA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735662 106 + 9889416 AAATAG-TCAAACGGCTGCCAGAAAACAAAGTAGCAAATCCATTTAGGCTCATTGGTTCATGTCTGGAACTTTCCAAATGAAAC--TGCA-TC------AAAGGAAAGTTTGAACG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172023 108 + 47401472 AAATAA-CCAAACTGCTGCCATAAAACAAAATAGCAAATCCATTTAGGCTCATTGTTGCATGTCTGGAACTTTCCAAGTGAAACTTCACA-TC------AAAGGAAAGTTTGAACA i micMur3.chr31 I 198 I 143 s proCoq1.NW_012144079v1 1061086 105 + 2694913 ATATAG-CCAAACTGCTGCCATAAAACAAAATAGCAAATCCATTTAGGCTC---GTTGCATGTCTGGAACTTTCCAAATGAAACTTCACA-TC------AAAGGAAAGTTTGGACA i proCoq1.NW_012144079v1 C 0 I 8 s otoGar3.GL873528 20733637 109 - 38779656 AAACAG-CCAAACTCCTGCCAGAAAACAAAATAGCAAATCCACTTAGGTTCACTGGTGCATGTCTGCAACTTTCCAAATGAAACTTCACAGTC------AAAGGAAAGGTTGAACA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78102665 108 + 98207768 AAATAACCCAAATTGCTGCCATTAGAAAAGGTTCTAAATCTACTTAGGCTCATCAATGCAGGCCTAGAAATTTCTAA-TGAAGAACTTCA-TC------AAAGGAAGGTTTAAACA i mm10.chr16 C 0 C 0 s canFam3.chr31 13799826 112 + 39895921 ACATAG-CCCAACTGTTGCCAAACAACAAAATAGCAAAT-TATCTAGGCTCATTGGTACATGTCT-TAACTTTCCAAATGAAACCTTGCA-TCAAAAAAAAAAAAAAGTTTGAGCA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570290 107 - 6883506 AAACAA-TCAAACTGCTTCCAGAAGACAAAATAGCAAATCTATCTAGGCTTATGGGTGCATGTGTAGAGCTTTCCAAATAAAATCATGCA-TT------AAAG-AAAGTTTGAGTA i dasNov3.JH568778 C 0 C 0 e rheMac8.chr3 155378016 8829 - 185818997 I a score=439988.000000 s hg38.chr21_KI270874v1_alt 52087 37 + 166743 CTTTTCTTC-AAGATCAGTC----AAAACTAAACTAAAATTG--- s panTro5.chr21 3676596 37 + 33445071 CTTTTCTTC-AAGATCAGTC----AAAACTAAACTAAAATTG--- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303520 37 + 46275980 CTTTTCTTC-AAGATCAGTC----AAAACTAAACTAAAATTG--- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242546 37 - 13858734 CTTTTCTTC-AAGATCAGTC----AAAACTAAACTAAAATTG--- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425565 37 + 32716333 CTTTTCTTC-AAGATCAATC----AAAACTAAACTAAAATTG--- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162202986 37 - 192294377 CTTTTCTTC-AAGATCAACC----AAAACTAAACTAAAATTG--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680204 37 + 9440265 CTTTTCTTC-AAGATCAACC----AAAACTAAACTAAAATTG--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410835 37 + 21915920 CTTTTCTTC-AAGATCAACC----AAAACTAAACTAAAATTG--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987437 37 - 90373283 CTTTTCTTC-AAGATCAACC----AAAACTAAACTAAAATTG--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159721 37 + 4234846 CTTTTCTTC-AAGATCAACC----AAAACTAAACTAAAATTG--- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161550 37 - 13750039 CTTTTCTTC-AAGATTAACC----AAAACTAAACTAAAATTG--- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915297 36 + 50472720 C-TTTCTAC-AGGGTCAATC----AAAACTAAACTAAAAATG--- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5022870 36 + 13128814 C-TTTCTAC-AGGATCAATC----AAAAGTCAACTAAAATTG--- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599181 36 - 14377064 C-TTTCTAC-AGGATCAATC----AAAACTCAACTAAAATTG--- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735768 35 + 9889416 A-TTTCTAC-AGGATCAATC----AAAACT-AACTAAAATTG--- i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1061199 37 + 2694913 CCTTCCTAC-AAGATCAATC----AAAACTAAACTAAAATTG--- i proCoq1.NW_012144079v1 I 8 I 95 s otoGar3.GL873528 20733746 37 - 38779656 CTGTCCTAC-AAGATCAATC----AAGAGCAGACTAAAATTG--- i otoGar3.GL873528 C 0 I 3 s mm10.chr16 78102773 41 + 98207768 -CTTCATGCAAAAATCAAACTTGTAAAATTAAACTCAAACTG--- i mm10.chr16 C 0 I 3 s canFam3.chr31 13799938 37 + 39895921 CTTTCCTAT-AAGATCAATC----AAAACTAAACTACAACTG--- i canFam3.chr31 C 0 I 3 s dasNov3.JH568778 3570397 41 - 6883506 CTTTCTTAC-AAGATCAATC---AAAAACTAAGCTATAATTGGTG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19172131 143 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=702430.000000 s hg38.chr21_KI270874v1_alt 52124 75 + 166743 CATGGCTTAAAGAGTTACAAATTTCC-------------ACTC------------------TTAAAAGCAATCTTATTTTGGTTGCTTGCAGCTGGTCCCAAAGC--A s panTro5.chr21 3676633 74 + 33445071 CA-GGCTTAAAGAGTTACAAATTTCC-------------ACTC------------------TTAAAAGCAATCTTATTTTGTTTGATTGCAGTTGAGTCCAAAGC--A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303557 74 + 46275980 CA-GGCTTAAAGAGTTACAAATTTCC-------------ACTC------------------TTAAAAGCAATCTTATTTTGTTTGATTGCAGTTGAGTCCAAAGC--A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242583 74 - 13858734 CA-GGCTTTAAGAGTTACAAATTTCC-------------ACTC------------------TTAAGAGCAATCTTATTTTGTATGATTGCAGTTGGGTCCAAAGC--A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425602 74 + 32716333 CA-GGCTTTAAGAGTTACAAATTTCC-------------ACTC------------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGGATCCAAAGC--A i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203023 73 - 192294377 CA-GGTTTTAAGAGTTACAAATTTCC-------------ATTC------------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGG-TCCAAAGC--A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680241 73 + 9440265 CA-GGTTTTAAGAGTTACAAATTTCC-------------ATTC------------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGG-TCCAAAGC--A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410872 73 + 21915920 CA-GGTTTTAAGAGTTACAAATTTCC-------------ATTC------------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGG-TCCAAAGC--A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987474 73 - 90373283 CA-GGTTTTAAGAGTTACAAATTTCC-------------ATTC------------------TTAAGAGCAATCTTATTTTGTTTGATTGCAATTGG-TCCAAAGC--A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159758 73 + 4234846 CA-GGTTTTAAGAGTTACAAATTTCC-------------ATTC------------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGG-TCCAAAGC--A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161587 73 - 13750039 CA-GGTTTTAAGAGTTACAAATTTCC-------------ATTT------------------TTAAGAGCAATCTTATTTTGTTTGATTGCAGTTGG-TCCAAAGC--A i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915333 74 + 50472720 CA-GGTTTCAATAGTTACAAATTTTC-------------ACTC------------------TTAAGAGCAAGCTTACTTTGCTTTATTGCAGTTGGGTCCAAAGC--A i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5022906 76 + 13128814 TA-GGTTTTAAAAGGTACAAATTTTC-------------ACTC------------------TTAAGAGCAAGCTTACTTTGTTTGTTTGCAGTTGGGTCCAAAGCAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599217 73 - 14377064 CA-GGTTT-AAAAGTTACAAATTTTC-------------ACTC------------------TTAAGAGCAAGCTTACTTTGTTTGATTGCAGTTGGGTCCAAAGC--A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735803 59 + 9889416 CA-GGTTTTAAAAGTTACAAATTTTC-------------ACTC------------------TTAAGA---------------TTGATTGCAGTTGGGTCCAAAGC--A i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20733786 92 - 38779656 CA-ACTTTTAAGAGTTACAAATTTAC-------------ACTCCTCTAATCTCTCTAATAGTTAAGAACAATCTTATTGTATGTGATGGCAGTTGGGTCATAAGT--G i otoGar3.GL873528 I 3 C 0 s mm10.chr16 78102817 91 + 98207768 CA-ATTTTTAAGGGTCTCAAGTTCCC-------------ACTATTCTAATCTCTTAGCTG-TTGAAATCATTCTTGAATCAAACTATGTCAGGTGGGCTACAAGC--A i mm10.chr16 I 3 I 1 s canFam3.chr31 13799978 51 + 39895921 CA-ACATTTAAGAGTTACAAATTTCC-------------ACTT-----------------------------------------GATTGCAGTTGAATTAAAAGC--A i canFam3.chr31 I 3 C 0 s dasNov3.JH568778 3570438 87 - 6883506 CA-TGATCTAAGAGTTACAAATTTCCACTAATCTCTCCAACTC------------------ATAAAAACAATCATATTTTTTTTTATTGCAGTTGTATCAGAAAC--A i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061236 95 + 2694913 I e micMur3.chr31 19172131 143 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=76654.000000 s hg38.chr21_KI270874v1_alt 52199 8 + 166743 AGAAATGA s panTro5.chr21 3676707 8 + 33445071 AGAAATGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303631 8 + 46275980 AGAAATGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242657 8 - 13858734 ACAAATGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425676 8 + 32716333 AGAAATGA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203096 8 - 192294377 AGAAATGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680314 8 + 9440265 AGAAATGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410945 8 + 21915920 AGAAATGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987547 8 - 90373283 AGAAATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159831 8 + 4234846 AGAAATGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161660 8 - 13750039 AGAAATGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915407 8 + 50472720 AAAAACAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5022982 8 + 13128814 AAAAACAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599290 8 - 14377064 AAAAACAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735862 7 + 9889416 AAAAAT-A i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1061331 8 + 2694913 AGAAAAGA i proCoq1.NW_012144079v1 I 95 C 0 s otoGar3.GL873528 20733878 8 - 38779656 AGAAAAGA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78102909 7 + 98207768 GGAAATG- i mm10.chr16 I 1 C 0 s canFam3.chr31 13800029 8 + 39895921 AGAAAGAG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570525 8 - 6883506 AGAAAAGG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19172131 143 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=1126515.000000 s hg38.chr21_KI270874v1_alt 52207 81 + 166743 AATATTTAAAATGGAGGAGTT-TGCA--ATATATTACTGG-ATCCTTTCTTAAGTGGCTATCCCTCCAAAGAATG--CCAAAACTTT s panTro5.chr21 3676715 81 + 33445071 AATATTTAAAATGGAGGA-TT-TGTA--ATATATTACTGGTATCCTTTCTTAAGTGGCCATCCCTCCAAAGAATG--CCAAAACTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303639 81 + 46275980 AATATTTAAAATGGAGGA-TT-TGTA--ATATATTACTGGTATCCTTTCTTAAGTGGCCATCCCTCCAAAGAATG--CCAAAACTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242665 81 - 13858734 AATATTTAAAATGGAGGA-TT-TGTA--ATATACTGCTGGTATCCTTTCTTAAGTGGCTATCCCTCCAAAGAATG--CCAAAACTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425684 81 + 32716333 AATATTTAAAATGGAGGA-TT-TGTA--ATATACTACTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATG--CCAAAACTTT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203104 81 - 192294377 AATATTTAAAATGGAGGA-TT-TGTA--ATATACTGCTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATG--CCAAAACTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680322 81 + 9440265 AATATTTAAAATGGAGGA-TT-TGTA--ATATACTGCTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATG--CCAAAACTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8410953 81 + 21915920 AATATTTAAAATGGAGGA-TT-TGTA--ATATACTGCTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATG--CCAAAACTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987555 81 - 90373283 AATATTTAAAATGGAGGA-TT-TGTA--ATATACTACTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATG--CCAAAACTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159839 81 + 4234846 AATATTTAAAATGGAGGA-TT-TGTA--ATATACTGCTGGTATCCTTTCTTAAGTGGCTGTCCCTCCAAAGAATG--CCAAAACTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161668 81 - 13750039 AATATTTAAAATGGAGGA-TT-TGTA--ATATACTACTGGTATCCTTTCTTAAGTGGCTATCCCTCCAAAGAATG--CCAAAGCTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915415 81 + 50472720 AATATTTAAAATGGAGGA-TT-TGTA--ATGCACTTCTGGTGTCCTTTCTTCAGTGGCTATCCCTCCAAAGAATG--CCAAAACTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5022990 81 + 13128814 AATATTTAAAATGGAGGA-TT-TGTA--ATACACTTCTGGTGTCCATTCTTAAGTGGCTATCCCTCCAAAGAATG--CCAAAACTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599298 81 - 14377064 AATATGTAAAATGGAGGA-TT-TGTA--ATACACTTCTGGTGTCCTTTCTTAAGTGGCTATCCCTCCAAAGAATG--CCAAAATTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735869 81 + 9889416 TATATTTTAAATGGACGA-TT-TGTA--ATACACTTCTGGTGTCCTTTCTTACGTGGCTATCCCTCCAAAGAATG--CCAAAACTTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172274 81 + 47401472 AATATTTAAAATGGAGGA-TT-TGTA--ATACATTACTGGTTTCCTTTCTTAAGTAGCTCTCCCTCCAAAGAATG--CCAAAACTTT i micMur3.chr31 I 143 I 96 s proCoq1.NW_012144079v1 1061339 81 + 2694913 AATATTTAAAATGGAGAA-TT-TGTA--ATACATTACTGCTTTCCTTTCTTAAGTAGCTGTCCCTCCAAAGAATG--CCAAAACTTT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20733886 81 - 38779656 AATATTTAAAATGGAGGA-TT-TGTAATATACATTACTG--TATATTACAGTAGTAGCTCTTCCTCCAAAGAATG--CTAAATCTTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78102916 70 + 98207768 GATATTAGACATGGAAGA-CTGTGTA--A-------CCAGTCTCCACTGTTGGGCAGC--TCCCTCTGAA-AACC--CTAATGCT-- i mm10.chr16 C 0 C 0 s canFam3.chr31 13800037 81 + 39895921 GGTATTTAAAATGAAGAG-TT-TGTA--ATACAACACTGGTTTCTTTTCTTAAGCAATTTTCTCTAAAAAGAATG--CCAAAACTTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570533 75 - 6883506 GGTATTT-AAGTGGAGGA-TT-TGTA--ATATAGT-------TTTCTTTTTAAGCAACTTTCTCTCTAAAGAATGCCCCAAAACATT i dasNov3.JH568778 C 0 C 0 e rheMac8.chr3 155378016 8829 - 185818997 I a score=65404.000000 s hg38.chr21_KI270874v1_alt 52288 5 + 166743 GTAGA s panTro5.chr21 3676796 5 + 33445071 GTAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303720 5 + 46275980 GTAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242746 5 - 13858734 GTAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425765 5 + 32716333 GTAGA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203185 5 - 192294377 GTAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680403 5 + 9440265 GTAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411034 5 + 21915920 GTAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987636 5 - 90373283 GTAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159920 5 + 4234846 GTAGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 161749 5 - 13750039 GCAGA i colAng1.NW_012120598v1 C 0 I 353 s calJac3.chr21 21915496 5 + 50472720 ATAGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023071 5 + 13128814 ATAGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599379 5 - 14377064 ATAGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735950 5 + 9889416 ATAGA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1061420 5 + 2694913 GTAAA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20733967 5 - 38779656 GTAAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78102986 5 + 98207768 ATAAA i mm10.chr16 C 0 I 1 s canFam3.chr31 13800118 5 + 39895921 GTAAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570608 5 - 6883506 GTAAA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19172355 96 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=71000.000000 s hg38.chr21_KI270874v1_alt 52293 7 + 166743 CTTGATT s panTro5.chr21 3676801 7 + 33445071 CTTGATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303725 7 + 46275980 CTTGATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242751 7 - 13858734 CTTGATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425770 7 + 32716333 CTTGATT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203190 7 - 192294377 TTTGATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680408 7 + 9440265 TTTGATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411039 7 + 21915920 TTTGATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987641 7 - 90373283 TTTGATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2159925 7 + 4234846 TTTGATT i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21915501 7 + 50472720 TTTGATT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023076 7 + 13128814 TTTGATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599384 7 - 14377064 TTTGATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8735955 7 + 9889416 TTTGATT i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1061425 7 + 2694913 CTTAATT i proCoq1.NW_012144079v1 C 0 I 85 s otoGar3.GL873528 20733972 5 - 38779656 CTTAA-- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78102992 7 + 98207768 TGTGATC i mm10.chr16 I 1 C 0 s canFam3.chr31 13800123 7 + 39895921 CTTGAAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570613 7 - 6883506 CTTGATC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19172355 96 + 47401472 I e colAng1.NW_012120598v1 161754 353 - 13750039 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=174460.000000 s hg38.chr21_KI270874v1_alt 52300 19 + 166743 AGGATTGCACTGGAGCCGG s panTro5.chr21 3676808 19 + 33445071 GGATTGGTACTGGAAATGG i panTro5.chr21 C 0 I 1 s panPan2.chr21 17303732 19 + 46275980 GGATTGGTACTGGAAATGG i panPan2.chr21 C 0 I 1 s gorGor5.CYUI01015003v1 3242758 19 - 13858734 GGATTGGTACTGGAAATGG i gorGor5.CYUI01015003v1 C 0 I 1 s nomLeu3.chr25 4425777 19 + 32716333 GGATTGGTACTGGAAATGG i nomLeu3.chr25 C 0 I 1 s macFas5.chr3 162203197 19 - 192294377 GGATTGGTACTGGAAATGG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 8680415 19 + 9440265 GGATTGGTACTGGAAATGG i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 8411046 19 + 21915920 GGATTGGTACTGGAAATGG i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr2 14987648 19 - 90373283 AGATTGGTACTGGAATTGG i chlSab2.chr2 C 0 I 17 s manLeu1.NW_012102865v1 2159932 19 + 4234846 GGATTGGTACTGGAAATGG i manLeu1.NW_012102865v1 C 0 I 1 s calJac3.chr21 21915508 19 + 50472720 GAATTTATACTGGAAATGG i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5023083 19 + 13128814 GAATTTATACTGGAAATGG i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9599391 19 - 14377064 GAATTTATACTGGAAGTGG i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8735962 19 + 9889416 GAATTTATACTAGAAATGG i aotNan1.NW_018487195v1 C 0 I 50 s otoGar3.GL873528 20733977 17 - 38779656 --ACTACTACTGGAAAAGG i otoGar3.GL873528 C 0 I 1 s mm10.chr16 78102999 19 + 98207768 AGAATGGTACTGAAAAAGA i mm10.chr16 C 0 I 1 s canFam3.chr31 13800130 19 + 39895921 AGACTAGGACTAGAAAATG i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3570620 19 - 6883506 AGACTGGTACTGGAAAAGG i dasNov3.JH568778 C 0 I 1 e proCoq1.NW_012144079v1 1061432 85 + 2694913 I e micMur3.chr31 19172355 96 + 47401472 I e colAng1.NW_012120598v1 161754 353 - 13750039 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=125666.000000 s hg38.chr21_KI270874v1_alt 52319 17 + 166743 ACTCAGCACTGCAGATT s panTro5.chr21 3676828 17 + 33445071 AAACAACACTGCAAAAT i panTro5.chr21 I 1 C 0 s panPan2.chr21 17303752 17 + 46275980 AAACAACACTGCAAAAT i panPan2.chr21 I 1 C 0 s gorGor5.CYUI01015003v1 3242778 17 - 13858734 AAACAACACTGCAAAAT i gorGor5.CYUI01015003v1 I 1 C 0 s nomLeu3.chr25 4425797 17 + 32716333 AAACAACACTGCAAAAT i nomLeu3.chr25 I 1 C 0 s macFas5.chr3 162203217 17 - 192294377 AAACAACACTGCAAAAT i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 8680435 17 + 9440265 AAACAACACTGCAAAAT i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 8411066 17 + 21915920 AAACAACACTGCAAAAT i cerAty1.NW_012002954v1 I 1 C 0 s manLeu1.NW_012102865v1 2159952 17 + 4234846 AAACAACACTGCAAAAT i manLeu1.NW_012102865v1 I 1 C 0 s calJac3.chr21 21915528 17 + 50472720 AAACAACATTGCAAAAT i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5023103 16 + 13128814 AAG-AACATTGCAAAAT i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9599411 16 - 14377064 AAA-AACACTGCAAAAT i cebCap1.NW_016107322v1 I 1 C 0 s otoGar3.GL873528 20733995 17 - 38779656 AAACAATACTACAGAAT i otoGar3.GL873528 I 1 C 0 s mm10.chr16 78103019 17 + 98207768 AAGCAGTACCACACTGT i mm10.chr16 I 1 C 0 s canFam3.chr31 13800150 17 + 39895921 AAACAACACTATAAAAT i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3570640 17 - 6883506 AAGCAACATTACAAAAG i dasNov3.JH568778 I 1 C 0 e proCoq1.NW_012144079v1 1061432 85 + 2694913 I e micMur3.chr31 19172355 96 + 47401472 I e aotNan1.NW_018487195v1 8735981 50 + 9889416 I e colAng1.NW_012120598v1 161754 353 - 13750039 I e chlSab2.chr2 14987667 17 - 90373283 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=304877.000000 s hg38.chr21_KI270874v1_alt 52336 34 + 166743 AGTGTAGAGCACGTTTTATCCAAAGCTAGCACGC s panTro5.chr21 3676845 32 + 33445071 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303769 32 + 46275980 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242795 32 - 13858734 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425814 32 + 32716333 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203234 32 - 192294377 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680452 32 + 9440265 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411083 32 + 21915920 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987684 32 - 90373283 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i chlSab2.chr2 I 17 C 0 s manLeu1.NW_012102865v1 2159969 32 + 4234846 AATGAAGAGAACATTTTATCC-AAGTTAGCACA- i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21915545 32 + 50472720 AACAAAGAGAACATTTTATCC-AGGTTAGCACA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023119 32 + 13128814 CATAAAGAGAACATTTTATTC-AGGTTAGCACA- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599427 32 - 14377064 AATAAAGAGAACATTTTATCC-AGGTTAGCACA- i cebCap1.NW_016107322v1 C 0 C 0 s otoGar3.GL873528 20734012 32 - 38779656 TATGAGGAGAACATTCTATCC-AAGTTTGCACA- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78103036 32 + 98207768 AATAATGCAAATATGTGACCT-GGGTTAAAATA- i mm10.chr16 C 0 C 0 s canFam3.chr31 13800167 32 + 39895921 AATAACAAGAACATTTTATCC-AGGTTAGCACA- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570657 32 - 6883506 AATGATGAGAACATTTTATCC-AGGTTTGCACA- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061432 85 + 2694913 I e micMur3.chr31 19172355 96 + 47401472 I e aotNan1.NW_018487195v1 8735981 50 + 9889416 I e colAng1.NW_012120598v1 161754 353 - 13750039 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=64220.000000 s hg38.chr21_KI270874v1_alt 52370 6 + 166743 AATGAA s panTro5.chr21 3676877 6 + 33445071 AATGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303801 6 + 46275980 AATGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242827 6 - 13858734 AATGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425846 6 + 32716333 AATGAA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203266 6 - 192294377 AATGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680484 6 + 9440265 AATGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411115 6 + 21915920 AATGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987716 6 - 90373283 AATGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160001 6 + 4234846 AATGAA i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21915577 6 + 50472720 AATGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023151 6 + 13128814 AATGAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599459 6 - 14377064 AATGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736031 6 + 9889416 AATGAA i aotNan1.NW_018487195v1 I 50 C 0 s otoGar3.GL873528 20734044 6 - 38779656 AATGGA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78103068 6 + 98207768 ATTAGA i mm10.chr16 C 0 C 0 s canFam3.chr31 13800199 6 + 39895921 GATAGG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570689 6 - 6883506 AATGTA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061432 85 + 2694913 I e micMur3.chr31 19172355 96 + 47401472 I e colAng1.NW_012120598v1 161754 353 - 13750039 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=93803.000000 s hg38.chr21_KI270874v1_alt 52376 9 + 166743 TAAGCTTTA s panTro5.chr21 3676883 9 + 33445071 TAAGCTTTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303807 9 + 46275980 TAAGCTTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242833 9 - 13858734 TAAGCTTTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425852 9 + 32716333 TAAGCTTTA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203272 9 - 192294377 TAAGCTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680490 9 + 9440265 TAAGCTTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411121 9 + 21915920 TAAGCTTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987722 9 - 90373283 TAAGCTTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160007 9 + 4234846 TAAGCTTTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162107 9 - 13750039 TAAGCTTTA i colAng1.NW_012120598v1 I 353 C 0 s calJac3.chr21 21915583 9 + 50472720 TAACCCTTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023157 9 + 13128814 TAACCCTTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599465 9 - 14377064 TAACACTTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736037 9 + 9889416 TAACCCTTA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20734050 9 - 38779656 TAACTCTTG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78103074 9 + 98207768 TAAACCATA i mm10.chr16 C 0 I 1 s canFam3.chr31 13800205 9 + 39895921 TAAGCCTTG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570695 9 - 6883506 TCAGTCTTG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061432 85 + 2694913 I e micMur3.chr31 19172355 96 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=944482.000000 s hg38.chr21_KI270874v1_alt 52385 62 + 166743 TTTTTAAAT------G--AAAAATTCCAAAGATACTGATTCAC---A-TAA----AGAGGGAGCATTTCAAGTTCACA s panTro5.chr21 3676892 62 + 33445071 TTTTTAAAT------G--AAAAATTCCAAAGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303816 62 + 46275980 TTTTTAAAT------G--AAAAATTCCAAAGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242842 61 - 13858734 -TTTTAAAT------G--AAAAATTCCAAAGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425861 62 + 32716333 TTTTTAAAT------G--AAAAATTCCAAAGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203281 62 - 192294377 TTTTTAAAT------G--AAAAATTCCAAGGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680499 62 + 9440265 TTTTTAAAT------G--AAAAATTCCAAGGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411130 62 + 21915920 TTTTTAAAT------G--AAAAATTCCAAGGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987731 62 - 90373283 TTTTTAAAT------G--AAAAATTCCAAGGATACCGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160016 62 + 4234846 TTTTTAAAT------G--AAAAATTCCAAGGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162116 62 - 13750039 TTTTTAAAT------G--AAAAATTCCAAGGATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915592 62 + 50472720 TTTTTAAAT------G--AAAAATTCCAAGAATACTGATTCAC---A-AAA----CGAGGGAGCATTTCAAGTTCACA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023166 62 + 13128814 TTTTTAAAT------G--AAAAATTCCAAGAATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599474 62 - 14377064 TTTTTAAAT------G--AAAAATTCCAAGAATACTGATTCAC---A-AAA----AGAGGGAGCATTTCAAGTTCACA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736046 62 + 9889416 TTTTTAAAT------G--AAAAATTCCAAGAATACTGATTCAC---A-AAA----AGAGAGAGCATTTCAAGTTCACA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172451 64 + 47401472 TTTTTAAAT------GAAAAAAATTCCAAAGAAACTAATTCAC---C-AAA----AGAGCGAGCATTTCAAGTTCATA i micMur3.chr31 I 96 C 0 s proCoq1.NW_012144079v1 1061517 62 + 2694913 TTTTTAAAT------G--AAAAATTCCAAGGAAACTAATTCAC---C-AAA----AGAGCGAGCATTTTAAGATCACA i proCoq1.NW_012144079v1 I 85 I 248 s otoGar3.GL873528 20734059 63 - 38779656 TTTTTAAAT------G--AAAACTTCCGAGGGAATTAACTCAC---CAAAA----AAAGCAAGCATTTCAAATTTGTG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78103084 72 + 98207768 ttttaaaattaaaaaa--aaaaaCTCCAGCAGAAATGATATTC---A-AAGAAATAAAGGAAACATTTCAAATTCACA i mm10.chr16 I 1 C 0 s canFam3.chr31 13800214 62 + 39895921 CTTTTAAAT------G--AAAAATTCCATGGAAACTGACGTAC---A-AAA----GGAGGGAGCATCTCAAGCTCACA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570704 65 - 6883506 TTTTTAAAC------G--GAAAATTCCATGGAAACTGATAAACGCAA-AAA----AAAGGAATCATTTCAAACTCATA i dasNov3.JH568778 C 0 C 0 e rheMac8.chr3 155378016 8829 - 185818997 I a score=162114.000000 s hg38.chr21_KI270874v1_alt 52447 15 + 166743 -TTATGAAAAGTCATT s panTro5.chr21 3676954 14 + 33445071 -TTA-GAAAAGTCATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303878 14 + 46275980 -TTA-GAAAAGTCATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242903 14 - 13858734 -TTA-GAAAAGTCATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425923 14 + 32716333 -TTA-GAAAAGTCATT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203343 14 - 192294377 -TTA-GAAAAGTCATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680561 14 + 9440265 -TTA-GAAAAGTCATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411192 14 + 21915920 -TTA-GAAAAGTCATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987793 14 - 90373283 -TTA-GAAAAGTCATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160078 14 + 4234846 -TTA-GAAAAGTCATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162178 14 - 13750039 -TTA-GAAAAGTCATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915654 14 + 50472720 -TTA-GAAAAGTCATG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023228 14 + 13128814 -TTA-GAAAAGTCATG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599536 14 - 14377064 -TTA-GAAAAGTCATG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736108 14 + 9889416 -TTA-GAAAAGTCATG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172515 14 + 47401472 -TTA-GGAAGGTCATT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20734122 14 - 38779656 -TTG-GAAAATTCTTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78103156 14 + 98207768 -TTT-GAAGATTTGtt i mm10.chr16 C 0 I 271 s canFam3.chr31 13800276 14 + 39895921 -CTA-GAAAGGTCATT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570769 12 - 6883506 TTGA-GCAGAAGC--- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061579 248 + 2694913 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=1054820.000000 s hg38.chr21_KI270874v1_alt 52462 92 + 166743 GGTAGG-ACCAACAAT------ACAGTATTTAGTGTAGCTGTTCTGGAACACAA-----------TGGAGCTAAATTGATTAAGCAGGGATATGAG-CTACAAAGTGAATA s panTro5.chr21 3676968 93 + 33445071 GGTAGGAACCAACAAT------ACAGTATTTAGTGTAGCTGTTCTGGCACAAAA-----------TGGAGCTAAATTGATTAAGCAGGGATTTGAG-CTACAAAATGAATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303892 93 + 46275980 GGTAGGAACCAACAAT------ACAGTATTTAGTGTAGCTGTTCTGGCACAAAA-----------TGGAGCTAAATTGATTAAGCAGGGATTTGAG-CTACAAAATGAATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3242917 93 - 13858734 GGTAGGAACCAACAAT------ACAGTATTTAGTGTAGCTGTTCTGGAACAAAA-----------TGGAGCTAAATTGATTAAGCAGGGATTTGAG-CTACAAAATGAATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4425937 93 + 32716333 GGTAGGAACCAACAAT------ACAGTATTTAGTGTAGCTGTTCTGGAACAAAA-----------TGGAGCTAAGTTGATTAAGCAGGAATTTGAG-CTACAAAATGAATA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203357 93 - 192294377 GGTAGGAACCAACAAT------ACAGTATTTAGTGTAGCTGTTCTGGAACAAAA-----------TGGAGCTAAATTGATTAAGCAGGAATTTGAG-CTACAAAATGAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680575 93 + 9440265 GGTAGGAACCAACAAT------ACAGTATTTAGTGTAGCTGTTCTGGAACAAAA-----------TGGAGCTAAATTGATTAAGCAGGAATTTGAG-CTACAAAATGAATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411206 93 + 21915920 GGTAGGAACTAACAAT------ATAGTATTTAGTGTAGCTGTTCTGGAACAAAA-----------TGGAGCTAAATTGATTAAGCAGGAATTTGAG-CTACAAAATGAATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987807 93 - 90373283 GGTAGGAACCAACTAT------ACAGTATTTAGTGTAGTTGTTCTGGAACAAAA-----------TGGAGCTAAATTGATTATGCAGGAATTTGAG-CTACAAAATGAATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160092 93 + 4234846 GGTAGGAACCAACAAT------ACAGTATTTAGTGTAGCTGTTCTGGAACAAAA-----------TGGAGCTAAATTGATTAAGCAGGAATTTGAG-CTACAAAATGAATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162192 93 - 13750039 GGTAGGGACCAACTAT------ACAGTATTTAGTGTAGCTGTTCTGGAACAAAA-----------TGGAGCTAAATTGATTAAGCAGGAATTTGAG-CTACAAAATGAATA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915668 93 + 50472720 GGTAGGAACCAACAAT------GTAGGATTTAGTGTGGCTCTTCTAGAACAAAA-----------TGGAGCTAAATTGATTAAACAGGAATTTGAG-CTACAAAATGAGTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023242 93 + 13128814 GGTAGGAACCAACAAT------ATAGTATTTAGTGTGGCTGTTCTAGAACAAAA-----------GGGAGCTAAATTGATTAAACAGGAGTTTGAG-CTACAAAATGAATA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599550 93 - 14377064 GGTAGGAACCAACAAT------ATAGTATTTAGTGTGCCTGTTCTAGAACAAAA-----------GGGAGCTAAATTGATTAAACAGGAGTTTGAG-CTACAAAATTAGTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736122 93 + 9889416 GGTAGGAACCAACAAT------ATAGTATTTAGTGTGGCTGTTCTAGAACAAAA-----------TGGAGCTAAATTGATTAAACAGGAGTTTGAG-CTACAAAATGAGTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172529 98 + 47401472 GGTGGAAACCAACTATATATTAATAATATTTAGAGCATCTGTTCTGGAACAAAA------------TGGACTAAATTGATTAAGCAGGGATTTGAA-CTACAAAGCAAATA i micMur3.chr31 C 0 I 3 s otoGar3.GL873528 20734136 104 - 38779656 GGTAGGAACCAGAAAT------ATAGTATTTAGGTTATCTTTTCTGCAAAAAAAAAAAAAAAAAGTGGGGCTAAATTAATTAAGCAGAAATTAGAA-CTACCAATCAAATA i otoGar3.GL873528 C 0 I 3 s canFam3.chr31 13800290 79 + 39895921 GGCAGAGACCAGCTTC------ATATTATTTAGAGTATCTGTTCTGGAACAAAA-----------GAGGGCTAAGCTGATTGAGCAGGG--------------AGTAAGT- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3570781 79 - 6883506 ------------TGAC------ATTGTATTTAATGTATCTGTCCTGAAACAAAA----------AAAGAGCCAATTTGATTGA----GGATTTGAGACTAAAATAAGAATA i dasNov3.JH568778 C 0 I 3 e proCoq1.NW_012144079v1 1061579 248 + 2694913 I e mm10.chr16 78103170 271 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=659953.000000 s hg38.chr21_KI270874v1_alt 52554 57 + 166743 TCAGAT-ATAACAGACTAATGCTTTAAAGAACTAC---AAGCTGCTGATTCTCA----ATAGCCT---- s panTro5.chr21 3677061 57 + 33445071 TCAGGT-ATAACAGACTAATGCTTTAAAGAACTAC---AAGCTGCTGATTCTCA----ATAGCCT---- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17303985 57 + 46275980 TCAGGT-ATAACAGACTAATGCTTTAAAGAACTAC---AAGCTGCTGATTCTCA----ATAGCCT---- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243010 58 - 13858734 TCAGGT-ATAACAGACTAATGCTTTAAAGAACTAC--AAAGCTGCTGATTCTCA----ATAGCCT---- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426030 57 + 32716333 TCAGCT-ATAACAGACTAATGCTTTAAAGAACTAC---CAGCTACTGATTCTCA----ATAGCCT---- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203450 57 - 192294377 TCAGGT-AAAACAGACTAATGTTTTAAAGAACTAT---AAGCTACTGATTCTCA----ACATCCT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680668 57 + 9440265 TCAGGT-AAAACAGACTAATGTTTTAAAGAACTAC---AAGCTACTGATTCTCA----ACATCCT---- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411299 57 + 21915920 TCAGGT-AAAACAGACTAATGTTTTAAAGAACTAC---AAGCTACTGATTCTCA----ACATCCT---- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987900 57 - 90373283 TCAGGT-AAAACAGACTAATATTTTAAAGAACTAC---GAGCTACTGATTCTCA----ACATCCT---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160185 57 + 4234846 TCAGGT-AAAACAGACTAATGTTTTAAAGAACTAC---AAGCTACTGATTCTCA----ACATCCT---- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162285 57 - 13750039 TCAGGT-AAAACCGACTAATGTTTTAAAGAACTAC---AAGCTACTGATTCTCA----ACTTCCT---- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915761 57 + 50472720 TCAGGC-ATAACAGACTAATGCTTTAAAGAGCTAC---AAGCTATTAACTCTCA----ATAACCT---- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023335 57 + 13128814 TCAGGC-ATAACAGACTAATGTTTTAAAGAGCTAC---ACGCTATTAACTCTCA----ATATCCT---- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599643 57 - 14377064 TCAGGC-AAAACAGACTAATGTTTTAAAGAGCTAC---AAGCTATTAACTCTCA----ATATCCT---- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736215 55 + 9889416 TCAGGC-ATAACAGACTAATGTTTTAAAGAGCTAC---AAGCTATTGA--CTCA----ATATCCT---- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172630 57 + 47401472 CCAGAT-TTAACAGACCAATATTTTAAAGAACTAC---AAGCTATTAATTTTCA----GTATTCT---- i micMur3.chr31 I 3 I 29 s otoGar3.GL873528 20734243 57 - 38779656 TTAGAT-TTTACAGACCAATATTTTAAAGAACTAC---AAGCTATTCACGCTCA----ATATGCT---- i otoGar3.GL873528 I 3 I 3 s mm10.chr16 78103441 60 + 98207768 TCAGATAATACCAGACTAATGTTTTAAAGAACTAC---AAACTACTTAATTCCAAGTTATATC------ i mm10.chr16 I 271 C 0 s canFam3.chr31 13800369 54 + 39895921 CCAGGT-ATTACAGATTAATG-TTTAAAGAATGAC---A--CTACTTATTTTCA----ACATTCT---- i canFam3.chr31 C 0 I 3 s dasNov3.JH568778 3570863 64 - 6883506 ATAGGC-ATTACAAGATTATGTTTTAAAGAACTATTATAGGCTATTTATTTTCA----AAAGTCTCCTT i dasNov3.JH568778 I 3 C 0 e proCoq1.NW_012144079v1 1061579 248 + 2694913 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=237204.000000 s hg38.chr21_KI270874v1_alt 52611 22 + 166743 TATGAGTTTTTAATTCTTACAT s panTro5.chr21 3677118 22 + 33445071 TATGAGTTTTTAATTCTTACAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304042 22 + 46275980 TATGAGTTTTTAATTCTTACAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243068 22 - 13858734 TATGATTTTTTAATTCTTACAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426087 22 + 32716333 TATGATTTTTTAACTCTTACAT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203507 22 - 192294377 TATGATTTTTGAATTCTTATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680725 22 + 9440265 TATGATTTTTGAATTCTTATAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411356 22 + 21915920 TATGATTTTTGAATTCTTATAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987957 22 - 90373283 TATGATTTTTGAATTCTTACAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160242 22 + 4234846 TATGATTTTTGAATTCTTGTAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162342 22 - 13750039 TATGATTTTTGAATTCTTACAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915818 22 + 50472720 TATGATTTTTGAATTCTTAAGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023392 22 + 13128814 TATGATTTTTTAATTCTTAAGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599700 22 - 14377064 TATGATTTTTGAATTCTTAAGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736270 22 + 9889416 TATGATTTTTGAATTCTTAAGT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20734303 22 - 38779656 TACGTTTTTTGAAATATTAAAT i otoGar3.GL873528 I 3 I 4 s mm10.chr16 78103501 22 + 98207768 TACATTTTTTGAATCTttttat i mm10.chr16 C 0 I 4 s canFam3.chr31 13800426 22 + 39895921 TATATTTTTTGAGTTCTTGAAT i canFam3.chr31 I 3 I 4 s dasNov3.JH568778 3570927 22 - 6883506 TATATTTTTTGAGTTATTGAAT i dasNov3.JH568778 C 0 I 7 e proCoq1.NW_012144079v1 1061579 248 + 2694913 I e micMur3.chr31 19172687 29 + 47401472 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=178325.000000 s hg38.chr21_KI270874v1_alt 52633 14 + 166743 TAT---AGAACTCTATA-- s panTro5.chr21 3677140 14 + 33445071 TAT---AGAACTCTATA-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304064 14 + 46275980 TAT---AGAACTCTATA-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243090 14 - 13858734 TAT---AGAACTCTATA-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426109 14 + 32716333 TAT---AGAACTCTATA-- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203529 14 - 192294377 TAT---AGAACTCTATA-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680747 14 + 9440265 TAT---AGAACTCTATA-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411378 14 + 21915920 TAT---AGAACTCTATA-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987979 14 - 90373283 TAT---AGAACTCTATA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160264 14 + 4234846 TAT---AGAACTCTATA-- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162364 14 - 13750039 TAT---AGAACTCTATA-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915840 14 + 50472720 TAT---AGAACTCTATA-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023414 14 + 13128814 TAT---AGAATTCTATA-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599722 14 - 14377064 CAT---AGAACTCCATA-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736292 14 + 9889416 TAT---AGAACTCTATA-- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172716 14 + 47401472 TAT---AGAACTCCATA-- i micMur3.chr31 I 29 C 0 s otoGar3.GL873528 20734329 14 - 38779656 TCC---AGAATTCCAAA-- i otoGar3.GL873528 I 4 C 0 s mm10.chr16 78103527 14 + 98207768 aat---agatttttata-- i mm10.chr16 I 4 I 6993 s canFam3.chr31 13800452 17 + 39895921 TATAGAAGAATTCCATA-- i canFam3.chr31 I 4 C 0 s dasNov3.JH568778 3570956 17 - 6883506 TAT--GAAAACTCCATATG i dasNov3.JH568778 I 7 C 0 e proCoq1.NW_012144079v1 1061579 248 + 2694913 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=312607.000000 s hg38.chr21_KI270874v1_alt 52647 32 + 166743 AACCAAATCACCTTCAAAATGATAATAAATTG s panTro5.chr21 3677154 32 + 33445071 AACCAAATCACCTTCAAAATGATAATAAATTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304078 32 + 46275980 AACCAAATCACCTTCAAAATGATAATAAATTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243104 32 - 13858734 AACCAAATCACCTTCAAAATGATAATAAATTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426123 32 + 32716333 AACCAAATCACCTACAAAATGATAATAAATTG i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203543 29 - 192294377 AACCAAATCACCTTCAAA---ATAATGAACTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680761 29 + 9440265 AACCAAATCACCTTCAAA---ATAATGAACTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411392 29 + 21915920 AACCAAATCACCTTCAAA---ATAATGAACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14987993 29 - 90373283 AACCAAATAACCTTCAAA---ATAATGAACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160278 29 + 4234846 AACCAAATCACCTTCAAA---ATAATGAACTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162378 29 - 13750039 AACCAAATCACCTTCAAA---ATAATGAACTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915854 32 + 50472720 AACCAAATCACCTTCAAACGGATAGTGAACAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023428 32 + 13128814 ATCCAAGTCACCTTCAAACTGATAGTGAGCAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599736 32 - 14377064 AACCAAATCACCTTCAAACTGATAGTGAGCAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736306 32 + 9889416 AACCAAATCACCTTCACACTGATAGTGAACAG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172730 32 + 47401472 TGCCAAAACATCTTCAAAATGATAACGGACCA i micMur3.chr31 C 0 I 1 s otoGar3.GL873528 20734343 32 - 38779656 GGCCAAACCATCTTCAAAATTATAATGGGCAA i otoGar3.GL873528 C 0 I 6 s canFam3.chr31 13800469 32 + 39895921 ACCCAAACCATCTTCAAAATGATAATGCACAA i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3570973 32 - 6883506 AACCAAACCATCTTCCAAGTAATAATGGACAG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061579 248 + 2694913 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=1334258.000000 s hg38.chr21_KI270874v1_alt 52679 106 + 166743 AAAATCTTC-AAAATAATCAATCTTCTTTGAATGTGCTTCTATTC---AAAAAGAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAACCTAATTTCAGTGATGATGA-C s panTro5.chr21 3677186 106 + 33445071 AAAATCTTC-AAAATAATCAATCTTCTTTGAATGTGCTTCTATTC---AAAAAGAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAACCTAATTTCAGTGATGATGA-C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304110 106 + 46275980 AAAATCTTC-AAAATAATCAATCTTCTTTGAATGTGCTTCTATTC---AAAAAGAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAACCTAATTTCAGTGATGATGA-C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243136 108 - 13858734 AAAATCTTCAAAAATAATCAATCTTATTTGAATGTGCTTCTATTC---AAAAAGAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAACCTAATTTCAATGATGATGACC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426155 106 + 32716333 AAAATCTTC-AAAATAATCAATCTTCTTTGAATGTGCTTCTACTC---AAAAAGAATGTGATAATTGAGTTTTTCCAAAAAGTGGCAAACCTAATTTCAATGATGATGA-C i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203572 106 - 192294377 AAAATCTTC-AAAATAATCAATCTTCTTTGAATGTGCTTCTATTC---AAAAAGAGTGTGAGAATTGAGTTTTTCGAAAAAGTGACAAACCTAATTTCAATGATGATGA-C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680790 106 + 9440265 AAAATCTTC-AAAATAATCGATCTTCTTTGAATGTGCTTCTATTC---AAAAAGAGTGTGAGAATTGAGTTTTTCGAAAAAGTGACAAACCTAATTTCAATGATGATGA-C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411421 106 + 21915920 AAAATCTTC-AAAATAATCAATCTTCTTTGAATGTGCTTCTATTC---AAAAAGAGTGTGAGAATTGAGTTTTTTGGAAAAGTGACAAACCTAATTTCAATGATGATGA-C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988022 106 - 90373283 AAAATCTTC-CAAATAATCAATCTTCTTTGAATGTGCTTCTATTC---AAAAAGAATGTGAGAATTGAGTTTTTCCAAAAAGTGACAAACCTAATTTTAATGATGATGA-C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160307 106 + 4234846 AAAATCTTC-AAAATAATCAATCTTCTTTGAATGTGCTTCTATCC---AAAAAGAGTGTGAGAAGTGAGTTTTTTGGAAAAGTGACAAACCTCATTTCAATGATGATGA-C i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162407 106 - 13750039 AAAATCTTC-AAAATAATCAATCTTCTTTGAATGTGCTTCTATTC---AAAAAGAGTGTGAGAACTGAGTTTTTCCAAAATGTGACAAACCTAATTTCAATGATGATGA-C i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915886 106 + 50472720 AAAATCTTC-AAAATAATCCATCTTCTTTGAATGTACTTCTACTCA--AAAAAGAATTTGAAAACTGAGTTTCTCCAAAAAGCGGCAAACCTAA-TTAAATGATGATGG-C i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023460 106 + 13128814 AAAATCTTC-AAAATAATCCATCTTCTTTGAATGTACTTCTACTCA--AAAAAGAATGTGAGAATTGAGTTTCTCCAAAAAGTGGCAAACCTAA-TTAAATGATGATGG-C i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599768 106 - 14377064 AAAATCTTC-AAAATAATCCATCTTCTTTGAATGTACTTCTACTCA--AAAAATAATGTGAGAATTGAGTTTCTCCAAAAAGTGGCAAACCTAA-TTAAATGATGATGG-C i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736338 108 + 9889416 AAAATCTTC-AAAATAATCCATCTTCTTTGAATGTACTTCTACTCAAGAAAAAGAATGTGAGAATTGAGTTTCTCCAAAAAGTGGCAAACCTAA-TTAAATGATGATGG-C i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172763 104 + 47401472 AAAATCTTC-AAAATAATCAATCTTTGTTGAATGTGCTTCTACTC---CAAAAGAA--TGAGAACTGCCTTTCTCAAGAAAGTGAAAAGTCTAATTTCAATGATGATGA-C i micMur3.chr31 I 1 I 1 s proCoq1.NW_012144079v1 1061827 104 + 2694913 AAAATCTTC-AAAATAATTAATCTTTGTTGAATGTGCTTCTACTC---CAAAAGAA--TGAGAACTGCATTTCTCAAGAAAGTGAGAAGTCTAATTTCAATGATGATGA-C i proCoq1.NW_012144079v1 I 248 I 62 s otoGar3.GL873528 20734381 104 - 38779656 CAAATCTTC-AAAATTATCATTCACTTTTGAATGTGCTTCTACTC---CAAAAGAA--TGAGAATTGCATTTCTCAAGAAAATGAGAAGTCTAATTTCAGTAATGATAG-C i otoGar3.GL873528 I 6 I 1 s canFam3.chr31 13800502 103 + 39895921 AAACACTCC-CAAATAATCAAACCTTTCTGAATGTGCCTCTGTTT---CAGAAAAATG---AAACTTTTTTTCTTCAAAAAGTGAGAAACCTAATTTCAATGACGATGA-C i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3571005 101 - 6883506 AAAAGCCCC-AAAATTACTAATCT---TTAAGTGTGCTTCCATTC---CA-AAGAATGTGAAAACTAGGTTTCTCCAGAAAGTAAGAAACTTAA-TTTAAAGATGATGT-A i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=39888.000000 s hg38.chr21_KI270874v1_alt 52785 5 + 166743 TTTTT- s panTro5.chr21 3677292 5 + 33445071 TTTTT- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304216 5 + 46275980 TTTTT- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243244 5 - 13858734 TTTTT- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426261 5 + 32716333 TTTTT- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203678 5 - 192294377 TTTTT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680896 5 + 9440265 TTTTT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411527 5 + 21915920 TTTTT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988128 5 - 90373283 ATTTG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160413 5 + 4234846 TTTTT- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162513 5 - 13750039 TTTTT- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21915992 5 + 50472720 TCTTT- i calJac3.chr21 C 0 I 3859 s saiBol1.JH378168 5023566 5 + 13128814 TTTTT- i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9599874 5 - 14377064 TTTTT- i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8736446 5 + 9889416 TTTTT- i aotNan1.NW_018487195v1 C 0 I 1 s micMur3.chr31 19172868 5 + 47401472 TTTTC- i micMur3.chr31 I 1 C 0 s otoGar3.GL873528 20734486 5 - 38779656 ATTCC- i otoGar3.GL873528 I 1 C 0 s canFam3.chr31 13800605 5 + 39895921 ttatt- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3571106 5 - 6883506 -ATTCA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061931 62 + 2694913 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=33975.000000 s hg38.chr21_KI270874v1_alt 52790 3 + 166743 TTA s panTro5.chr21 3677297 3 + 33445071 TTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304221 3 + 46275980 TTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243249 3 - 13858734 TTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426266 3 + 32716333 TTA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203683 3 - 192294377 TTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680901 3 + 9440265 TTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411532 3 + 21915920 TTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988133 3 - 90373283 TTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160418 3 + 4234846 TCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162518 3 - 13750039 TTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21919856 3 + 50472720 TTA i calJac3.chr21 I 3859 C 0 s saiBol1.JH378168 5023572 3 + 13128814 TTA i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9599880 3 - 14377064 TTA i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8736452 3 + 9889416 TTA i aotNan1.NW_018487195v1 I 1 C 0 s micMur3.chr31 19172873 3 + 47401472 CCA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20734491 3 - 38779656 TCA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13800610 3 + 39895921 tga i canFam3.chr31 C 0 I 137 s dasNov3.JH568778 3571111 3 - 6883506 TCA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061931 62 + 2694913 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=519448.000000 s hg38.chr21_KI270874v1_alt 52793 54 + 166743 -TTTCCAACTGGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAAAGT s panTro5.chr21 3677300 54 + 33445071 -TTTCCAACTGGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAAAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304224 54 + 46275980 -TTTCCAACTGGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAAAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243252 54 - 13858734 -TTTCCAACTGGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAAAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426269 54 + 32716333 -TTTCCAACTAGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTCGACAAAGT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203686 54 - 192294377 -TTTCCAGCTGGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAAAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680904 54 + 9440265 -TTTCCAGCTGGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAAAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411535 54 + 21915920 -TTTCCAGCTGGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAAAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988136 54 - 90373283 -TTTCCAACTGGAG------------------------------------AAAGAGGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAAAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160421 54 + 4234846 -TTTCCAGCTGGAG------------------------------------AAAGAGGCAAAGATCTAG-CTGCTATTT-AAGTTTGACAAAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162521 54 - 13750039 -TTTCCAACTGGAG------------------------------------AAAAAAGCAAAGATCTAG-TTGCTATTT-AAGTTTGACAGAGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21919859 54 + 50472720 -TTTACAATTGAAG------------------------------------AAAGAGGCAAAGATCCAG-CTGCTATTT-AAGTTTTATATAGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023575 54 + 13128814 -TTTACAATTGGAG------------------------------------AAAGAGGCCAAGATCTAG-CTGCTATTT-AAGTTTTATAAAGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599883 54 - 14377064 -TTTACAATTGGAG------------------------------------AAAGAGGCAAAGATCTAG-CTGCTATTT-AAGTTTTATAAAGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736455 54 + 9889416 -TTTACAATTGGAG------------------------------------AAAGAGGCAAAGATCTAG-CTACTATTT-AAGTTTTATAAAGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172876 54 + 47401472 -TTTTTAACT-GAA------------------------------------AAAGAGGCAAAGAACTAACCTTCTGTTTGAAGTTTTACAAGT- i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20734494 54 - 38779656 -TTTTTAACT-CAG------------------------------------AAAGGGGTAAAGAACTAACCTTCTGTTTGAAGTTTTATAAAT- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13800750 91 + 39895921 -taaccaactgaggcacccaggtgcccTGACTTTTCCTTATTTTCAATTTCAAGGGACAAAGAGCTACCTTGGAATTTGAAGTTTTACAAGT- i canFam3.chr31 I 137 C 0 s dasNov3.JH568778 3571114 52 - 6883506 TTTTCCTCTT---A------------------------------------GAAGGGGGAAACATCTAA-CTATTATTT-GAAGTTTTTGAAGT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1061931 62 + 2694913 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=730356.000000 s hg38.chr21_KI270874v1_alt 52847 56 + 166743 CTA---CATTTTGAGGAAATCTTATTATCCTTAGAATATTTAGAATAATGCTAGTAGTT s panTro5.chr21 3677354 56 + 33445071 CTA---CATTTTGAGGAAATCTTATTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304278 56 + 46275980 CTA---CATTTTGAGGAAATCTTATTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243306 56 - 13858734 TTA---CATTTTGAGGAAATCTTATTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426323 56 + 32716333 CTA---CATTTTGAGGAAATCTTATTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203740 59 - 192294377 CTACATCATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8680958 56 + 9440265 CTA---CATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411589 56 + 21915920 CTA---CATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988190 56 - 90373283 CTA---CATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAACAATGCTAGTAGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160475 56 + 4234846 CTA---CATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162575 56 - 13750039 CAA---CATTTTGAGGAAATCTTGTTATCCTTAGAATATTTAGAATAATGCTAGTAGTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21919913 56 + 50472720 CTA---CATTTGGGGAAAATCTAATTATCCTTAGAATATTTAGAATAATGCTAATAGTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023629 56 + 13128814 CTA---CATTTGGGGAAAATCTAATTATCCTTAGAATATTTAGAATAATGCTAATAGTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599937 56 - 14377064 CTA---CATTTGGGGAAAATCTAATTATCCTTAGAATATTTAGAATCATGCTAATAGTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736509 56 + 9889416 CTA---CATTTGGGGAAAATCTAATTATCCTTAGAATATTTAGAATAATGCTAATAGTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172930 53 + 47401472 CTA---CATTTTGGGGAAA---TATTATCCTTAGAATATTTAGAATAATGTTAATAGTT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1061993 56 + 2694913 CTA---CATTTTGGAGAAATTTTATTATCCTTAGAATATTTACAATAATGCTAATAGTT i proCoq1.NW_012144079v1 I 62 I 16695 s otoGar3.GL873528 20734548 55 - 38779656 CTA---CCTTGTGAGGAAA-TTTATTATCCTTAGAATATTTAAAACAATTCTAATATTT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13800841 49 + 39895921 GCA---CACTTTGAAGATATCTTTTTATCCTAAGAATATTTAGAAGAATATT------- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3571166 52 - 6883506 TTA---CATTCTTACAAAAACTATTTATCTTTGAAATATTTAGAGTAAAATGAAT---- i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=965486.000000 s hg38.chr21_KI270874v1_alt 52903 88 + 166743 AAGAGTGAACAATACTGTCTCTGTT--------------------TCTATATAGCAGAATGAGCACATGCATCTAATTGCAATATTATCTGACAGTCTACTTAAACTA s panTro5.chr21 3677410 88 + 33445071 AAGAGTGAACAATATTGTCtctgtt--------------------tcaatatagcagaatgagcacatgcatctaattgcaatattatctgacagtctacttaaacta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304334 88 + 46275980 AAGAGTGAACAATATTGTCtctgtt--------------------tcaatatagcagaatgagcacatgcatctaattgcaatattatctgacagtctacttaaacta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243362 88 - 13858734 AAGAGTGAACAATATCATCtctgtt--------------------tcaatacagcagaatgagcacatgcatctaattgtaatattatctgacagtctacttaaacta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426379 88 + 32716333 AAGAGTGAACAATACCAGCtctgtt--------------------tcaatacagtagaatgagcacatgcatctaattgtaatattatctgatagcctacttaaacta i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203799 88 - 192294377 AAGAGTGAACAATATCGGCTCTGTT--------------------TCAATACAGTAGTGtgagcacgtgcatctaattgcaataatatctgacagcctactcaaacta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8681014 86 + 9440265 AAGAGTGAACAATATCGGCTCTGTT--------------------TCAATACAGTAGTGtgagcacgtgcatctaattgcaataatatctgacagcctactcaaac-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411645 88 + 21915920 AAGAGTGAACAATATCGGCTCTGTT--------------------TCAATACAGTAGTGtgagcacgtgcatctaattgcaataatatctgacagcctactcaaacta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988246 88 - 90373283 AAGAGTGAACAATATCGGCTCTGTT--------------------TCAATACAGTAGTAtgaacacatgcatctaattgcaataatatctgacagcctacttaaacta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160531 88 + 4234846 AAGAGTGAACAATATCGGCTCTGTT--------------------TCAATACAGTAGTGtgagcacgtgcatctaattgcaataatatctgacagcctactcaaacta i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162631 88 - 13750039 AAGAGTGAACAATATCGGCTCTGTT--------------------TCAATACAGTCATAtgagcacatgcatctaattgcaataatatctgacagcctacttaaacta i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21919969 87 + 50472720 AAGAGTGAATAACATTGGCtctgtt--------------------tcaatatagtagaatgagcacatgcatctaattgtaatatcatctgacaatctac-taaacaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023685 88 + 13128814 AAGACTGAGTAACATTGGCtctgtt--------------------tgaatatagtagaatgagcacatgcatctaattgtaatatcatctgacaatctacttaaacaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9599993 88 - 14377064 AAGAGTGAATAACATTGGCtctgtt--------------------tcaacatagtcgaatgagcacatgcatctaattgtagtatcatctgacaatctacttaaacaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736565 88 + 9889416 AAGAGTGAATAACATTGGCtctgtt--------------------tcaatatagtagaatgagcacatgcatctaattgtaatatcatctgacaatctacttaaacaa i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19172983 81 + 47401472 -------AATAACATTGGCTCTATT--------------------TCAGTatgatagattgagcacatgcacctaattgcaatatcttctgaaaccccactaaaacta i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20734603 101 - 38779656 -------AATAATATACTCTCCACTTGGAGATATGGAGATTGAGCTCaatatggtagattgaacacgtgtgcctaattgcagtatcttccgaaaccctactaaaacta i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13800890 88 + 39895921 AATAGTGACTAACAATGACTCTATt--------------------tcaatatggtagattgagcacatacatctaattacaatatttcctgaagccctactaaaacta i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3571218 87 - 6883506 -AGAGTTACTAACATTGGCTATCTT--------------------TCAATCTGGCAGATTGATCATATGCATCTAGTTGCCAAATCTTCTGAAAGCCTACTAAAAGTA i dasNov3.JH568778 C 0 I 15392 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=296650.000000 s hg38.chr21_KI270874v1_alt 52991 29 + 166743 TAGTAAAGTA-TTTTT---TAAAAGATTTAAAC s panTro5.chr21 3677498 29 + 33445071 cagtaaagta-ttttt---taaaagatttaaac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304422 29 + 46275980 cagtaaagta-ttttt---taaaagatttaaac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243450 29 - 13858734 cagtaaagta-ttttt---ttaaagatttaaac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426467 29 + 32716333 cagtaaagta-ttttt---taaaagatttaaac i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203887 29 - 192294377 cagtaaagta-ttttt---taaaagatttaaac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8681100 26 + 9440265 ---taaagta-ttttt---taaaagatttaaac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411733 29 + 21915920 cagtaaagta-ttttt---taaaagatttaaac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988334 29 - 90373283 cagtaaagta-ttttt---taaaagatttaaac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160619 29 + 4234846 cagtaaagta-ttttt---taaaagatttaaac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162719 29 - 13750039 cagtaaagta-ttttt---ttaaagatttaagc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21920056 29 + 50472720 cagtaaagta-ttttt---aaaaagatttatac i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023773 30 + 13128814 cagtaaagtatttttt---aaaaagatttatac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9600081 30 - 14377064 cagtaaagtatttttt---aaaaagatttatac i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736653 30 + 9889416 cagtaaagtatttttg---aaaaagatttatac i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19173064 28 + 47401472 cagtaaagta--tttt---taaaagatttaaac i micMur3.chr31 C 0 I 8539 s otoGar3.GL873528 20734704 29 - 38779656 cagaaaggca-ttttt---ttaaatatttaaac i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13800978 31 + 39895921 tagtaaagta-ttttttagtaaagTATTTTAA- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=122918.000000 s hg38.chr21_KI270874v1_alt 53020 12 + 166743 CCACAAAGACAC s panTro5.chr21 3677527 12 + 33445071 ccacaaagacac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304451 12 + 46275980 ccacaaagacac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243479 12 - 13858734 ccacaaagacac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426496 12 + 32716333 ccacaaagacat i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203916 12 - 192294377 ccacaaagacac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8681126 12 + 9440265 ccacaaagacac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411762 12 + 21915920 ccacaaagacac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988363 12 - 90373283 ttacaaagacac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160648 12 + 4234846 ccacaaagacac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162748 12 - 13750039 ccccaacaacac i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21920085 12 + 50472720 ccacaaaaatac i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023803 12 + 13128814 ccacaaagacac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9600111 12 - 14377064 ccacaaagacac i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736683 12 + 9889416 ccacaaagacac i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20734733 12 - 38779656 ccacaaggaaac i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13801009 10 + 39895921 --AAAAaaacac i canFam3.chr31 C 0 I 13813 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=60293.000000 s hg38.chr21_KI270874v1_alt 53032 13 + 166743 AAAGAATAAGAAT s panTro5.chr21 3677539 13 + 33445071 aaagaataagaat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304463 13 + 46275980 aaagaataagaat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243491 13 - 13858734 aaagaataagaat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426508 13 + 32716333 aaagaataataat i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203928 8 - 192294377 aaagaata----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8681138 8 + 9440265 aaagaata----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411774 8 + 21915920 aaagcata----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988375 8 - 90373283 aaagaata----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160660 8 + 4234846 aaagaata----- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162760 8 - 13750039 aaagaata----- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21920097 13 + 50472720 aaagaataagaaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023815 13 + 13128814 aaagaataagaaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9600123 13 - 14377064 aaagaataagaaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736695 13 + 9889416 aaagaataagaaa i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20734745 13 - 38779656 acagaataacgat i otoGar3.GL873528 C 0 I 41 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=333703.000000 s hg38.chr21_KI270874v1_alt 53045 57 + 166743 AAAGATAACACTGCATTGTGAGAGTTGAATG--------------------acacacacagacacacacacacac----------ac s panTro5.chr21 3677552 57 + 33445071 aaagataacactgcattgtgagagttgaatg--------------------acacacacagacacacacacacac----------ag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304476 57 + 46275980 aaagataacactgcattgtgagagttgaatg--------------------acacacacagacacacacacacac----------ag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243504 57 - 13858734 aaagataacactgcattttgagagttgaatg--------------------acacacacagacacacacacacag----------ag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426521 67 + 32716333 aaagataacactgcattttgagagttgaatg--------------------acacacacagacacacacacacacacagagagagag i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162203936 65 - 192294377 aaagataacactgcattttgagagttgaat------------cacacacacacacacacacacacacacacacac----------ac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8681146 77 + 9440265 aaagataacactgcattttgagagttgaatcacacacacacacacacacacacacacacacacacacacacacac----------ac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411782 77 + 21915920 aaagataacactgcattttgagagttgaatgacacacacacacacacacacacacacacacacacacacagagag----------ag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988383 61 - 90373283 aaagaTAACACTGCATTCTGAGAGTTGAATG----------------acacacacacacacacacacacagagag----------ag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160668 63 + 4234846 aaagataacactgcattttgagagttgaatg--------------acacacacacacacacacacacacacacag----------ag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162768 49 - 13750039 aaagataacactgcattttgagagttgaatg----------------------------acacacacacatgcag----------ag i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21920110 45 + 50472720 aaagataacaTTGCATTTTAAGAGTTGAATG--------------------------------GCACACACAGAC----------AC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5023828 45 + 13128814 aaagataacactgcattttaagagttgaatg--------------------------------gcacacacagac----------ac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9600136 45 - 14377064 aaagataacTTTGCATTTTAAGAGTTGACTG--------------------------------GCACACACAGAC----------AC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8736708 45 + 9889416 aaagataacattgcattttaagagttgaatg--------------------------------gcacacacagac----------ac i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20734758 41 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=1198487.000000 s hg38.chr21_KI270874v1_alt 53102 152 + 166743 agagagagaaagagagagaTTGACTAACGGCTATTTCCTCCCACTAGTAGTTATGGGAAACTTAGGGTAAaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgagggtttatgggaga s panTro5.chr21 3677609 152 + 33445071 agagagagaaagagagagattgactaacggctatttcctcccactagtagttatgggaaacttagggtaaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgagggttcatgggaga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304533 152 + 46275980 agagagagaaagagagagattgactaacggctatttcctcccactagtagttacgggaaacttagggtaaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgagggttcatgggaga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243561 152 - 13858734 agaaagagagagagagagattgactaacggctatttcctcccactagtagttatgggaaacttaagataaaatctaatttatgtcacagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgagggttcatgggaga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426588 152 + 32716333 agagagagagagagagagattgactaatgactatttcctcccaccagtagttatgggaaacttaggataaaatctactttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taataagggtttatgggaga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162204001 152 - 192294377 acagaaagagagagagagattgactaatggctatttcctcccaccagtagttatgggaaatgtaagataaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgagagtttatgggaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8681223 152 + 9440265 acagaaagagagagagagattgactaatggctatttcctcccaccagtagttatgggaaatgtaagataaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgagagtttatgggaga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8411859 152 + 21915920 agagaaagagagagagagattgactaatggctatttcctcccaccagtagttatgggaaatgtaagataaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgagagtttatgggaga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988444 152 - 90373283 agagaaagagagagagagaTTGACTAATGGCTATTTCCTCCCAccagtagttatgggaaatgtaagataaaatctaatttgtgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgagggtttatgggaga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160731 152 + 4234846 agagaaagagagagagagattgactaatggttatttcctcccaccagtagttatgggaaatgtaagataaaatctaatttatgtcagagaatactcaaaaggcataggaactaacagcaacaggtgacttta-taatgaaagtttatgggaga i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162817 152 - 13750039 agatagagagagagagagattgactaatggctattttctcccacaagtagttatgggaaatgtaagataaaatctaatctatgtcagagaatactcaaaaggcataggaactaactgcaacaggtgacttta-taatgagggtttatgggaga i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21920155 128 + 50472720 ATAGAGAGAGAGAAAGAGATGGACTAATGGCTATTTACTCCCACCAGGAGTTATAGGAATCTTAAGATAAAATCTAGTTTAT------------------------GGAACTAGCAGCAACAGGTACCTTCA-TAATGAGAGTTTTTGGAAGA i calJac3.chr21 C 0 I 2 s saiBol1.JH378168 5023873 126 + 13128814 atagagagagag--agagatggactaatggctatttactcccaccaggagttatgggaaacttaagataaaatctagtttat------------------------ggaactagcagcaacaagtaccttta-taatgagagtttttgggaaa i saiBol1.JH378168 C 0 I 2 s cebCap1.NW_016107322v1 9600181 122 - 14377064 ATAGAGAGAA----AGAGATGGACTAATGGCTATTCACTCCCACCAAGAGTTATGGGAAGC--AAGATAAAATCTAGTTTAT------------------------GGAATTAGCAGCAATAGGTACCTTTA-TAATGAGAGTTTTGGGGAGA i cebCap1.NW_016107322v1 C 0 I 50 s aotNan1.NW_018487195v1 8736753 128 + 9889416 atagagagagagaaagagatggactaatggctatttactcccaccaggagtcatgggaaacttaagatcaaatctagtttat------------------------ggaactagcagcaacaggtaccttta-taatgagagttttggggaga i aotNan1.NW_018487195v1 C 0 I 48 s otoGar3.GL873528 20734799 138 - 38779656 ------------agagtgagaaactaatggtaatttcttcccaccagca---ataagaaatttaagataaaatctgatttataccacagaacactcaaaaggcgtagaaactagctacaacaggtaccgtcgttaattagggtttaaagaagg i otoGar3.GL873528 I 41 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=36614.000000 s hg38.chr21_KI270874v1_alt 53254 8 + 166743 caggagat s panTro5.chr21 3677761 8 + 33445071 caggagat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304685 8 + 46275980 caggagat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243713 8 - 13858734 caggagat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426740 8 + 32716333 caggagat i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162204153 8 - 192294377 atggagat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8681375 8 + 9440265 atggagat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8412011 8 + 21915920 atggagat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988596 8 - 90373283 atggagat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160883 8 + 4234846 atggagat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162969 8 - 13750039 atggaaat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21920285 8 + 50472720 TAAGAAAT i calJac3.chr21 I 2 I 28 s saiBol1.JH378168 5024001 8 + 13128814 taggaaat i saiBol1.JH378168 I 2 I 26 s otoGar3.GL873528 20734937 8 - 38779656 atggggag i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e aotNan1.NW_018487195v1 8736881 48 + 9889416 I e cebCap1.NW_016107322v1 9600303 50 - 14377064 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=9075722.000000 s hg38.chr21_KI270874v1_alt 53262 1062 + 166743 aaaata-----------aagaggcccagagaaaagc-tttttgagaaacaagcagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcacac------gtgtagaatgctggaagcttattttct-agaaatga--------------ttaaaAaaataaa---taaataaataaataaaAGAGGATACTTTCAtttcctgtggttgtagtaaaagaagtcaccacaaatgggggtttcaaacttcaaaaatgtattctctctcagttctagaggtcagaactctaaaatcagtttcactgaatcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctgacttcttctagcttTCTCAAATGGCTGTGGCTctccaaactctgcctgtatagtcacaccg--------tctcctttcctgtgcatgtcaaatctccctctgcctctctttcacaagggtacaag-----------agatctcacccaaataatgcaatacagtcctaccatgtcaagatt----ctt---------agttagatctgc-------aaagacccttatttcttataaggtaatattttcaggttccagggattaggacttgatgtgttttggtggccattaAAAATAGTGCCCTTGCTCTAATACAAAGAATATGTAATTTGCgaatgccaggcaccgttgagggcataggtaccataaatgactatatgaaaagaaacacaccaacttcttcctcacttagcttccataatgcc-aaaaaaagtggactcttaccttcccttaaatagatctaaaagctctactgtaaggaacttgattagtccaaaaagaaagttctaaagttagtgcccc--caaaatgcccccaccaccagattattctgcagtgaagctcaa----agtcaacaaatcagatccacatgatcacagtctccattcagtcttttattcttccactctt-aatcacaggcatacagagattgccagatatctgagagaagcttcaaacatggaagatagactct-aaaataaacaaacaaaaagcaaATACCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTT s panTro5.chr21 3677769 1062 + 33445071 aaaata-----------aagaggcccagagaaaagc-tttttgagaaacaagcagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcacac------gtgtagaatgctggaagcttattttct-agaaatgg--------------ttaaaAAAAATAA---AAAATAAATTAAAAAAAGAGGATACTTTCAtttcctgtggttgtagtaaaagaagtcaccacaaatgggggtttcaaacttcaaaaatgtattctctttcagttctagaggtcagagctctaaaatcagtttcactgaatcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctgatttcttctagcttTCTCAAATGGCTGTGGCTctccaaactctgcctgtatagtcacacca--------tctcctttcctgtgcatgtcaaatctccctctgcctctctttcacaagggtacaag-----------agatctcacccaaataatgcaatacagtcctaccatgtcaagatt----ctt---------agttagatctgc-------aaagacccttatttcttataaggtaatattttcaggttccagggattaggacttgatgtgttttggtggccattaAAAATAGTGCCCTTGCTCTAATACAAAGAATATGTAATTTGTgaatgccaggcaccattgagggcataggtaccataaatgactatatgaaaagaaacacaccaacttcttcctcacttagcttccataatgcc-aaaaaaggtggactcttaccttcccttaaatagatctaaaagctctactgtaaggaacttgattagtccaaaaagaaagttctaaagttggtgcccc--caaaatgcccccaccaccagattattctgcagtgaagctcaa----agtcaacaaatcagacccacatgatcacagtctccattcagtcttttattcttccactctt-aatcacaggcatacagggattgccagatatctgagagaagcttcaaacatggaagatagactct-aaaataaacaaacaaaaagcaaATACCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17304693 1061 + 46275980 aaaata-----------aagaggcccagagaaaagc-tttttgagaaacaagcagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcacac------gtgtagaatgctggaagcttattttct-agaaatgg--------------tTTAAAAAAATAA---AAAATAAATTAA-AAAAGAGGATACTTTCAtttcctgtggttgtagtaaaagaagtcaccacaaatgggggtttcaaacttcaaaaatgtattctctttcagttctagaggtcagaactctaaaatcagtttcactgaatcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctgatttcttctagcttTCTCAAATGGCTGTGGCTctccaaactctgcctgtatagtcacacca--------tctcctttcctgtgcatgtcaaatctccctctgcctctctttcacaagggtacaag-----------agatctcacccaaataatgcaatacagtcctaccatgtcaagatt----ctt---------agttagatctgc-------aaagacccttatttcttataaggtaatattttcaggttccagggattaggacttgatgtgttttggtggccattaAAAATAGTGCCCTTGCTCTAATACAAAGAATATGTAATTTGCgaatgccaggcaccgttgagggcataggtaccataaatgactatatgaaaagaaacacaccaacttcttcctcacttagcttccataatgcc-aaaaaaggtggactcttaccttcccttaaatagatctaaaagctctactgtaaagaacttgattagtccaaaaagaaagttctaaagttggtgcccc--caaaatgcccccaccaccagattattctgcagtgaagctcaa----agtcaacaaatcagatccacatgatcacagtctccattcagtcttttattcttccactctt-aatcacaggcatacagggattgccagatatctgagagaagcttcaaacatggaagatagactct-aaaataaacaaacaaaaagcaaATACCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3243721 1048 - 13858734 aaaata-----------aagaggcccagagaaaagc-tttttgagaaacaatgagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcatac------gtgtagaatgctggaagcttattttct-agaaatgg--------------ttaaaAAAAAAAA---A------------AAAAGAGGATACTTTCAtttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacttcaaaaatgtattctctctcagttctagaggtcagaactctaaaatcagtttcactgaatcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctgatttcttctagcttTCTCAAATGGCTGTGGCTctccaaactctgcctgtatagtcacacca--------tctcctttcctgtgtatgtcaaatctccctctgcctctctttcacaagggtacaag-----------agatctcacccaaataatacaatacagtcctaccatgtcaagatt----ctt---------agttagacctgc-------aaagacccttatttcttataaggtaatattttcaggtcccagggattaagacttgatgtgttttggtggccattaAAAATAGTGGCCTTGCTgtaatacaaagaatatgtaatttgtgaatgccaggcaccgttgagggcataggtatcataaatgactacatgaaaagaaacacaccaagttcttcctcacttagcttccataatgcc-aaaaaaagtggactcttaccttcccttaaatagatctaaaagctcttctgtaaggaacttgattagtcc-aaaagaaagttctaaagttggtg-ccc--caaaatgcccccaccaccagattattctgcagtgaagctcaa----agtcaacaaatcagatccacatgatcacagtctccattcagtcttttattcttccactctt-aatcacaggcatacagggattgccagatatctgagagaagcttcaaacatggaagagagactct-aaaataaacaaacaaaaagcaaATACCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4426748 1020 + 32716333 aaaata-----------aggaggcccagagaaaagc-tttttgagaaacaatgagatctcaggatcctctacttgattccatgttgctgagcaagtgccctaccagcacacattccagtgtagaatgctggaagcttattttct-agaaatgg--------------ttaaaaaaaaaaa---aaaaa--------aaaaaaGGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacttcaaaaatgtattctctctcagttctagaggtcagaactctaaaatcagtttcactgaatcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctgatttcttctagctttctcaaatggctgtggatctccgaactctgcctctatagtcacactg--------tctcctttcctgtgtgtgtcaaatctccttctgcctctcttttacaagggtacaaa-----------agatctcacccaaataatgcaagacagtcctactatgtcaagatt----ctt---------agttagatctgc-------aaagacccttatttcttataagataatattttcaggtcccggggattaggacttgatgtgttttggtggccattaAGAATAGTGGCCTTGCTCTAAGACAAAGAATATGTAATGTGCGAATGCCAGGCACCACTGAGGG--------------------------------------CAACTTCTTCCTCACTTAGCTTCCATAATGCC-AAAAAAAGTGGACTCTCACCTTCCCTTAAATTGATCTaaaagctcttctgtaaggaacttgattagtccaaaaagaaagttctaaagttggtgcccc--caaaatgcccccaccaccagatcattctgcagtgaagctcaa------tcaacaaatcagatccacatgatcacagtcttcattcagtcttttattcttccactctt-aatcacaggcatacagggattgccagatatccgagagaagcttcaaacatggaagagagactct-aaaataaacaaacaaaaagcaaattCCTCTTTGGGGGTAGCAGGCTATTCAAGGAAAGAAGCTTACTTTTT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162204161 1047 - 192294377 aaaata-----------aagaggcccagagaaaagcttttttaagaaacaatgagatctcaggatcctctacttgattccatcttgctgagcaagtgccctaccagcacac------ttgtagaatgctggaagcttattttct-agaaatgg-------------------aaaaaAAA---A------------AAAAGAGGCTAAGTTCAtttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcaaaaatgtattctctctcagttctagaggtcagaactctacaatcagtttcactgactcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagcgtccctccctggtttcttctagctttctcaaatgactgtggatctccaaactcttcctgtatagtcacacca--------tctcctttcctgtgtatgtcaaatctccctctgcctctcttttacaaggttacaag-----------agatttcacccaaatgatacaatatagtcctactatgtcaagatt----ctt---------agttagatctgctaactaaaaagactcttatttcttgtaaggtaatattttcaggtcccagggattaggacttgatgtgttttggtggccattaAGAATACTAACCTTGCTCGAATACAAAGAATATGTAATTTGTGAATGTCAGGCACTGTTGAGGGCATAGGTACCATAAATGactatatgaatagaaacacaccaacttcttcctcacttagcttccataatgcc-aaaaaa-gtggactcttatcttctcttaaatagatttaaaagctctactgtagggaacttgattagtccaaaaagaaagttctaaagttggtgccct--caaaatgccc---ccatcagatcattctgcagtgaagctcaa----agtcaacaa---atatccacatgatcacagtctccattcagtcttttattcttccattcttaaatcacaggcatacagggattgccagatagctgagagaagcttcaaacacagaagacagactct-aaaataagcaaacaaaaagcaaATACCTCTTTGGGGGTAGTAAACTATCCAAGGAAAGAAGCTTACTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8681383 1045 + 9440265 aaaata-----------aagaggcccagagaaaagcttttttaagaaacaatgagatctcaggatcctctacttgattccatcttgctgagcaagtgccctaccagcacac------ttgtagaatgctgcaagcttattttct-agaaatgg---------------------aaaaaa---a------------aaaagAGGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcaaaaatgtattctctctcagttctagaggtcagaactctacaatcagtttcactgactcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagcgtccctccctggtttcttctagctttctcaaatgactgtggatctccaaactcttcctgtatagtcacacca--------tctcctttcctgtgtatgtcaaatctccctctgcctctcttttacaaggttacaag-----------agatttcacccaaatgatacaatatagtcctactatgtcaagatt----ctt---------agttagatctgctaactaaaaagactcttatttcttgtaaggtaatattttcaggtcccagggattaggacttgatgtgttttggtggccattaAGAATACTAACCTTGCTCGAATACAAAGAATATGTAATTTGTGAATGTcaggcactgttgagggcataggtaccataaatgactatatgaatagaaacacaccaacttcttcctcacttagcttccataatgcc-aaaaaa-gtggactcttatcttctcttaaatagatttaaaagctctactgtagggaacttgattagtccaaaaagaaagttctaaagttggtgccct--caaaatgccc---ccatcagatcattctgcagtgaagctcaa----agtcaacaa---atatccacatgatcacagtctccattcagtcttttattcttccattcttaaatcacaggcatacagggattgccagatagctgagagaagcttcaaacacagaagacagactct-aaaataagcaaacaaaaagcaaATACCTCTTTGGGGGTAGTAAACTATCCAAGGAAAGAAGCTTACTTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8412019 1047 + 21915920 aaaata-----------aagaggcccagagaaaagcttttttaagaaacaatgagatctcaggatcctctacttgattccatcttgctgagcaagtgccctaccagcacac------ttgtagaatgctggaagcttattttct-agaaacgg------------------aaaaaAAAA---A------------AAAAGATGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcaaaaatgtattctgtctgagttctagaggtcagaactctacaatcagtttcactgactcaaacgcaaggtgttggcaggacctcatttcctcc---------atgagagcgtccctccctggtttcttctagctttctcaaatggctgtggatctccaaactcttcctgtatagtcacacca--------tctcctttcctgtgtatgtcaaatctccctctgcctctcttttacagggttacaag-----------agatttcacccaagtgatacaatatagtcctactatgtcaagatt----ctt---------agttagatctgctaactaaaaagactcttatttcttgtaaggtaatattttcaggtcccagggattaggacttgatgtgttttggtggccaTTAAGAATACTAACCTTGGTCGAATACAAAGAATATGTAATTTGTGAATGTcaggcactgttgagggcataggtaccataaatgactatatgaatagaaacacaccaacttcttcctcacttagcttccataatgcc-aaaaaa-gtggactcttatcttctcttaaatagatttaaaagctctactgtagggaacttgattagtccaaaaagaaagttctaaagttggtgccct--caaaatgccc---ccatcagatcattctgcagtgaagctcaa----agtcaacaa---atatccacatgatcacagtctccattcagtcttttattcttccattctt-aatcacaggcatacagggattgccagatagctgagagaagcttcaaacacagaagacagactct-aaaataagtgaacaaaaagcaaATACCTCTTTGGGGGTAGTAAACTATCCAAGCAAAGAAGCTTACTTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14988604 1050 - 90373283 aaaata-----------aagaggcccagagaaaagcttttttaagaaacaatgagatctcaggatcctctacttgattccgtcttgctgagcaagtcccctaccagcacgc------ttgtagaatgctggaagcttgttttct-agaaatgga---------------aaaaAAAAAAA---A------------AAAAGAGGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcaaaaatgtattctctctcagttctagaggtcagaactctaaaatcagtttcactgactcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctggtttcttctagctttctcaaatggctgtggatctccaaactcttcctgtatagtcacacca--------tctcctttcctgtgtatgtcaaatctccctctgcctctcttttacaaggttacaag-----------agatttcacccaaatgatacaatatagtcctactatgtcaagatt----ctt---------agttagatctgctaactaaaaagactcttatttcttgtaaggtaatattttcaggtcccagggattaggacttgatgtgttttggtggccattaAGAATAGTAACCTTGCTCAAATACAAAGAATATGTAATTTGTGAATGCCAGGCACTGTTGAGAGCATAGGTACCACAAATGACTATATGAATAGAAACAcagcaacttcttcctcacttagcttccataatgcc-aaaaaa-gtggactcttatcttctcttaaacagatttaaaagctcttctgtagggaacttgattagtccaaaaagaaagttctaaagttggtgccct--caaaatgccc---ccatcagatcattctacagtgaagctcaa----agtcaacaa---atagccacatgatcacagtctccattcagtcttttattcttccattctt-aatcacaggcatacagggattgccagatagctgagagaagcttcaaacacagaagacagactct-aaaataagcaaacaaaaagcaaATACCTCTTTGGGGGTAGTAGACTATCCAAGGAAAGAAGCTTACTTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2160891 1044 + 4234846 aaaata-----------aagaggcccagagaaaagcttttttaagaaacaatgagatctcaggatcctctacttgattctatcttgctgagcaagtgccctaccagcacac------ttgtagaatgctggaagcttattttct-agaaacgg---------------------aaaaaa---a------------aaaagAGGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcaaaaatgtattctctctcagttctagaggtcagaactctacaatcagtttcactgactcaaatgcaaggtattggcaggacctcatttcctcc---------atgagagcgtccctccctggtttcttctagctttctcaaatggctgtggatctccaaactcttcctgtatagtcacacca--------tctcctttcctgtgtatgtcaaatctccctctgcctctcttttacagggttacaag-----------agatttcacccaagtgatacaatatagtcctaccatgtcaagatt----ctt---------agttagatctgctaactaaaaagactcttatttcttgtaaggtaatattttcaggtcccagggattaggacttgatgtgttttggtggccattaAGAATACTAACCTTGCTCAAATACAAAGAATATGTAATTTGTGAATGTcaggcactgttgagggcataggtaccataaatgactatatgaatagaaacacaccaacttcttcctcacttagcttccataatgcc-aaaaaa-gtggactcttatcttttcttaaatagatttaaaagctctactgtagggaacttgattagtccaaaaagaaagttctaaagttggtgccct--caaaatgccc---ccatcagatcattctgcagtgaagctcaa----agtcaacaa---atatccacatgatcacagtctccattcagtcttttattcttccattctt-aatcacaggcatacagggattgccagatagctgagagaagcttcaaacacagaagacagactct-aaaataagcaaacaaaaagcaaATACCTCTTTGGGGGTAGTAAACTATCCAAGCAAAGAAGCTTACTTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 162977 1069 - 13750039 aaaata-----------aagaggcccagagaaaagcttttttaagaaacaatgagatctcaggatcctctacttgattccatcttgctgaggaagtgccctaccagcacac------ttgtagaatgctggaagcttattttct-agaaacgggaaaaaaaacaaaaacaaaaaacaata---a------------aaaaGAGGAtatgttcatttcctgtggttgttgtaaaagaagtcaccacaaatgggggcttcaaacatcacaaatgtattctctctcagttctagaggtcagaactctaaaatcagtttcactgactcaaatgcaaggtgttggcaggacctcatttcctcc---------atgagagagtccctccctggtttcttctagctttctcaaatggctgtgaatctccaaactcttcctgtatagtcacactg--------tctcctttcctgtgtatgtcaaatctccctctgcctctcttttacaaggttacaag-----------agatttcacccaaatgatacaatatagtcccactatgtcaagatt----ctt---------agttagatctgctaactaaaaagactcttatttcttgtaaggtaatattttcaggtcccagggattaggacttgatgtgttttggtggccattaAGAATAATAACCTTGCTCGAATACAAAGAATATGTAATTTGTgaatgccaggcactgttgagggcatagataccataaatgactatatgaatagaaacacaccaacttcttcctcacttagcttccataatgcc-aaaaaa-gtggactcttaccttctcttaaatagatttaaaagctcttctgtagggaacttgattagtccaaaaagaaagttctaaagttggtgcccca-aaaaatgccc---ccatcgggtcattctgcagtgaagctcaa----agtcaacaaatcatatccacatgatcacagtctccattcagtcttttattcttccattctt-aatcgcaggcatacagggactgccagatagctgagagaagcttcaaacacagaagacagactct-aaaataagcaaacaaaaagcaaATACCTCTTTGGGGGTAGCATACTATCCAAGGAAAGAAGCTTAGTTTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21920321 1047 + 50472720 AAAATA-----------AAGACGCCCAGAgaaaagc-tttttgagaaacaatgagatctgaggatcccctacttgattccatgttgctaaccaagtaccttaacagcacac------ttgcagaatgctggaggcttattttct-agaaatgg-------------------------taaaga------------aaaagagtATACACTCACttcctgtgg-tgttgtaaaagaagtcaccacagatgggggcttaaaacgtcaaaaatgtattctctttcagttcta-agttcagaaatctaaaatcagcttcaccgaattaaatgcaaggtgttggcaggacctcatttcctccagcggctctataagaaagtccctttcttgtttcgtctagcttTCTCAAATGAC--TGGATctccaaactctgcctgcatagt--cactg--------tctcctctcctgtgtatgtcaaatctccctctgtctttcttttgcaagggtataag-----------agatctcacccagataatccaatgcagtcctactgtatcaagattcttactt---------agtcagatctgc-------aaagacccttatttcttataaggtgatattttccgtttccaggaatgaggatttgatgtgttttggtggccattGAGAATAGTAGCCTCGCTgtaatacaaagaatatatgatttgagaattccaggcacagttgagggcataggtactataaatgactgtatgagtagaaacgcaccaacttcttcctcacttagcttccataatgcc-aaaaaa-gtagactcttaaccttccttaaatagatttaaaaggtcttctgtagggaacttgattagtccaaaaagaaagttctaaaatcggtgccac--ccaaacacctccaccaccagatcattctgcagtgaagctcaa----aatcaaaaaatcacattcacatgatcacagtctccatccagtcttttattcttccactctt-aatcagagatatacagggattgccagatatctgagagaagtttcaaacatggaagggagactct-aaaataaacaaacaagaagcaaACACCTCTTTGGGGATAATAGGCTGTTCAGGGAAAGAAGCTTAC-TTTT i calJac3.chr21 I 28 C 0 s saiBol1.JH378168 5024035 1045 + 13128814 aaaata-----------aagaggcctagagaaaagc-tttttgagaaacagtgagatctcaggatcccctacttgattccacgttgctaaccaagtactttatcagcacac------ttgtagaatgctggaggcttattttct-agaaatgg-------------------------ta---a------------aaaagagTATACattcatttcctgtgg-tgttgtaaaagaagtcaccacagatgggggcttaaaacatcaacaatgtattctctctcagttcta-agttcagaaatcgaaaatcagtttcactgaattaaatgcaatgtgttggcaggacctcatttcctccagaggctccatgagaaagtccctttctggtttcttctagcttTCTCAAATGAC--TGGATctccaaactctgcctgcatagt--cactg--------tctcctctcctgtctatgtcaaatctccctctgcctttcttttgcaagggtataaa-----------agatctcacccagataatccaatacagtcctactatgtcaagattcttactt---------agtcagatctgc-------aaagacccttatttcttacaaggtgatattttcaggttccaggaatgaggatttgatgtgttttggtggccattaAGAATAGTAGCCTCGCTgtaatacaaagaatatatgatttgagaattccaggcacagctgagggcataggtaccataaatgactatatgaatagaaacacaccaacttcgtccttatttagcttccataatgccaaaaaaa-gtggactcttacccttccttaaatagatttaaaaggtcttctgtagggaacttgactagtccaaaaagaaagttctaaaatcggtgccac--caaaatgcctcgaccaccagatcattctgcagtgaagctcaa----aatcaaaaaatcccatccacatgatcaccgtctccattcagtcttttattcttccactctt-aatcagagacatacagggaatgtcagatatctgagagaagtttcaaacatggaagagaggctct-aaaacaaacaaacaaaaagcaaATACCTCTTTGGGGATAATAGGCTATTCAGGGATAGAAGCTTAC-TTTT i saiBol1.JH378168 I 26 C 0 s cebCap1.NW_016107322v1 9600353 1044 - 14377064 aaaata-----------aagaggcccagagaaaagc--ttttgagaaacaatgagatctcagggtcccctacttgattccatgttgctaaccaagtgccttatcagcacac------ttgtagaatgctggaggcttattttct-agaaatgg-------------------------ta---a------------aaaagagTATACattcatttcctgtgg-tgttgtaaaagaagtcaccacagatgggggcttaaaacatcaaaaatgtattctctctcagttcta-agttcagaaatcgaaaatcagtttcaccaaattaaatgcaaggtgttggcaggacctcatttcctccagaggctccatgagaaagtccctttctggtttcttctagctttctcaaatgac--tagatctccaaactctgcctgcatagt--cactg--------tctcctctcctgtgtatgtcaaatctccctctgcctttcttttgcaagggtataag-----------agatctcacccagataatccaatacagtcctactatgtcaagattcttactt---------agtcagatctgc-------aaagacccttaattcttataaggtgatattttcaggttccaggaatgaggatttgatgtgttttggtggccaTTAAGAATAGTAGCCTCGCTgtaatacaaagaatatatgatttgagaattccaggcacagttgagggcataagtaccataaatgactatatgaatagaaacacatcaacttcgtccttatttagcttccataatgccaaaaaaa-gtggactcttacccttccttaaatatatttaaaaggtcttctgtagggaacttgactagtccaaaaagaaagttctaaaatcagtgtcac--caaaatgcctccaccaccagatcattctgcagtgaagctcaa----aatcaaaaaatcccatccacatgatcacagtctccattcagtcttttattcttccactctt-aatcagagacatacagggattgccagatatctgggagaagtttcaaacatggaagagaggctct-aaaataaacaaacaaaaagcaaATACCTCTTTGGGGATAATAGGCTATTCAGGGACAGAAGCTTAC-GTTT i cebCap1.NW_016107322v1 I 50 C 0 s aotNan1.NW_018487195v1 8736929 1044 + 9889416 aaaata-----------aagaggcccagagaaaagc-tttttgagaaacaatgagatctcaggatcccctacttgattccatgttgctaaccaagtacctgatcagcacac------ttgtagaatgctggaggcttattttct-agaaatgg-------------------------ta---a------------aaaagagTATACattcatttcctgtgt-tgttgtaaaagaagtcaccacagatgggggcttaaaacatcaaaaatgtattctctctcagttcta-agttcagaaattgaaaatcattttcactaaattaaatgcaaggtgttggcaggacctcatttcctccagaggctacatgagaaagtccctttctggtttcttctagttttctcaaatgac--tggatctccaaactctgcctgcatagt--cactg--------tctcctctcctgtgtatgtcaaatctccctctgcctttcttttgcaagggtataag-----------tgatctcacccagataatccaatacagtcctactatgtcaagattcttactt---------agtcagatccgc-------aaagacccttatttcttataaggtgatattttcaggttccaggaatgaggacttgatgtgttttggtggccaTTAAGAATAGTAGCCTCGCTgtaatacaaagaatatatgatttgagaattccaggcacagttgagggcataggtaccataaatgactatatgaatggaaacacaccaacttcgtcctcacttagcttccataatgcc-aaagaa-gtggactcttacccttccttaaatagatttaaaaggtcttctgtagggaacttgactagttcaaaaagaaagttctaaaatcggtgccac--caaaacgcctccaccaccagatcattctgcagtgaagctcaa----aatcaaaaaatcacatccacatgatcacagtctccattcagtcttttattcttccactctt-aatcagagacatacagggattgccagatatctgagagatgtttcaaacatggaagagagactct-aaaataaacaaacaaaaagcaaatacctctttggggataataggctattcagggaaagaaGCTTAC-TTTT i aotNan1.NW_018487195v1 I 48 C 0 s otoGar3.GL873528 20734945 1002 - 38779656 gaaacagaggcccaggggagaggcccaggagagagg-cccaggagaaacaatgagatcttaaga--ctctgcctgattccaccttgctgagcaagtgtcccaccaacaaat------ctgcagaatataggaagcttattctctgaaaaATAG------------------TTTAAAAAG---A------------AAAAAAGGGCCtgttagtttcctgtgctttctggaaaaaaaat-accacaaatggggactt-aaccagtatggatttaatttctcacagttctagaagcaagatatttaatatcattctcacggaatgaaatgcaaggtggtggaaggacctgatttccttcagagaatctgtgggatatgccc--------cgcttccagcttccttggg-gactccataactccagactcggagtctatggtcacactatctcttcctctcctctcctgag--tgtcaaacctccctccgcctctcttgtacaagaatacatgtgatagcacttagatccctcctacataatccaaaataatctcagcacatcaagatt----cttcacttgcccagtcactcctgc-------aaagacccCGATCT--------------TTATCAGGTCCTCGGGA----------------------GGCTTTTA-----------TTCAGTCTAATACAGAAGACACATGACTCAGGGatgctggatgatgttga-----------------------------acagaaacacaccagcttcttcctcacttagcttccatgacatc-aaaaaa-ctggaccttcacactccaggaaatacatttaaaagctcttctttggggaacttgaacagcctaaaaggaaagttctaaagttggttccccagcaatgtgcccacacaacctgatcattctacagtcaagcacaaagtcagtcaataaatcacatccacataatcagcatctccattcagactctcattaccccactctc-aaggataggcaggtaggaagtgccaagtatctgaaagaaacttttactgtggaagagaggctccaaaaataaataaataaatg--------ctgctggagagtaacagggtgtagaataagaaaagcttacttatt i otoGar3.GL873528 C 0 I 620 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=252544.000000 s hg38.chr21_KI270874v1_alt 54324 29 + 166743 ATAGTAGTGATAGCCTCTGAACAAT-AAAA s panTro5.chr21 3678831 29 + 33445071 ATAGTAGTGATAGCCTCTGAACAAT-AAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17305754 29 + 46275980 ATAGTAGTGATAGCCTCTGAACAAT-AAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3244769 29 - 13858734 ATAGTAGTGATAGCCTCTGAACAAT-AAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4427768 29 + 32716333 ATAGTAGTGATAGCCTCTGAACAAT-AAAA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162205208 29 - 192294377 ATAGTAGTGATAGCCTCTGAACAAT-AAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8682428 29 + 9440265 ATAGTAGTGATAGCCTCTGAACAAT-AAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8413066 29 + 21915920 ATAGTAGTGATAGCCTCTGAACAAT-AAAA i cerAty1.NW_012002954v1 C 0 I 23 s chlSab2.chr2 14989654 30 - 90373283 ATAGTAGTGATACCCTCTGAACAATAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2161935 29 + 4234846 ATAGTAGTGATAGCCTCTGAACAAT-AAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 164046 29 - 13750039 ATAGTAGCAATGCCCTCTGAACAAT-AAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21921368 29 + 50472720 ACAGTAGTGATAGCCTCTGAACAAT-AAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5025080 29 + 13128814 ATAGTAGTGATAGTCTCTGAACAAT-AAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9601397 26 - 14377064 A---TAGTGATAGCCTCTGAACAAT-AAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8737973 29 + 9889416 ATAGTAGTGACAGCCTCTGAACAAT-AAAA i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=58585.000000 s hg38.chr21_KI270874v1_alt 54353 8 + 166743 ACAGATGG s panTro5.chr21 3678860 8 + 33445071 ACAGATGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17305783 8 + 46275980 ACAGATGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3244798 8 - 13858734 ACAGATGG i gorGor5.CYUI01015003v1 C 0 I 1 s nomLeu3.chr25 4427797 8 + 32716333 ATAGATGG i nomLeu3.chr25 C 0 I 1 s macFas5.chr3 162205237 8 - 192294377 ATAGATGG i macFas5.chr3 C 0 I 17 s macNem1.NW_012019910v1 8682457 8 + 9440265 ATAGATGG i macNem1.NW_012019910v1 C 0 I 36 s chlSab2.chr2 14989684 8 - 90373283 ATAGATGG i chlSab2.chr2 C 0 I 36 s manLeu1.NW_012102865v1 2161964 8 + 4234846 ATAGATGG i manLeu1.NW_012102865v1 C 0 I 36 s colAng1.NW_012120598v1 164075 8 - 13750039 ATAGATGG i colAng1.NW_012120598v1 C 0 I 36 s calJac3.chr21 21921397 8 + 50472720 ATAAATGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5025109 8 + 13128814 ATAAATGG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9601423 8 - 14377064 ATAAATGG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8738002 8 + 9889416 ATAAATGG i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e cerAty1.NW_012002954v1 8413095 23 + 21915920 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=19025.000000 s hg38.chr21_KI270874v1_alt 54361 15 + 166743 -AAACATTTAGAGACC- s panTro5.chr21 3678868 15 + 33445071 -AAACATTTAGAGACC- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17305791 15 + 46275980 -AAACATTTAGAGACC- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3244807 15 - 13858734 -AAACATTTAGAGAAC- i gorGor5.CYUI01015003v1 I 1 C 0 s nomLeu3.chr25 4427806 15 + 32716333 -AAACATTTAGAGAAC- i nomLeu3.chr25 I 1 C 0 s macFas5.chr3 162205262 15 - 192294377 -AAATATTCAAACATC- i macFas5.chr3 I 17 I 4 s calJac3.chr21 21921405 13 + 50472720 AAAAC----AGAGAACC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5025117 13 + 13128814 AAAAC----AGAGAACT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9601431 13 - 14377064 AAAAC----AGAGAACT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8738010 13 + 9889416 AAAAC----AGAGAACT i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 164083 36 - 13750039 I e cerAty1.NW_012002954v1 8413095 23 + 21915920 I e macNem1.NW_012019910v1 8682465 36 + 9440265 I e manLeu1.NW_012102865v1 2161972 36 + 4234846 I e chlSab2.chr2 14989692 36 - 90373283 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=4572244.000000 s hg38.chr21_KI270874v1_alt 54376 560 + 166743 TGAAAGAACAAT---AAAAAAATTTAAGAATTGAAAGACTTaaactaaaattatctacccattcagtccatcaacatataaatagagaaaataagccattttcagatttgcaaaataccaaatttttgattttctcgtaaccttcctcaaaaagttattgaggatgtttactctgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaacaaaaaa-agac--aaaaataa-tgagaaagccatttgaaagacac--aacatcaggcaacaaaggtaaatcctaatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaaactcagatggagcccagaggctccctgagttgaggacacagagatgagactccagagagatgaagaacgaagttagagtttctaggaaagagtaccagagaggagagagctcacaggacgaaacccagagaactgcagaatgtgccccacaagtagcgatcagtgctataagtgagaagactacccaaagtaggggggaaaacacccaaaagg s panTro5.chr21 3678883 559 + 33445071 TGAAAGAACAAT---ATAAAAATTTAAGAATTGAAAGACTTaaactaaaattatctacccattcagtccatcaacatataaatagagaaaataagccattttcagatttgcaaaataccaaa-ttttgattttcacgtaaccttcctcaaaaagttattgaggatgtttactctgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaacaaaaaa-agac--aaaaataa-tgagaaagccatttgaaagacac--aacatcaggcaacaaagataaatcctaatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaaactcagatggagcccagaggctccctgagttgaggacacagagatgagactccagagagatgaagaacgaagttagagtttctaggaaagagtaccagagaggagagagctcacaggacgaaacccagagaactgcagaatgtgccccacaagtagcgatcagtgctataagtgagaagactacccaaagtaggggggaaaacacccaaaagg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17305806 559 + 46275980 TGAAAGAACAAT---AAAAAAATTTAAGAATTGAAAGACTTaaactaaaattatctacccattcagtccatcaacatataaatagagaaaacaagccattttcagatttgcaaaataccaaa-ttttgattttcacgtaaccttcctcaaaaagttattgaggatgtttactctgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaacaaaaaa-agac--aaaaataa-tgagaaagccatttgaaagacaa--aacatcaggcaacaaagataaatcctaatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaaactcagatggagcccagaggctccctgagttgaggacacagagaagagactccagagagatgaagaacgaagttagagtttctaggaaagagtaccagagaggagagagctcacaggacgaaacccagagaactgcagaatgtgccccacaagtagcgatcagtgctataagtgagaagactacccaaagtaggggggaaaacacccaaaagg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3244822 564 - 13858734 TGAAAGAACAAT---AAAAAAATTTAAGAATTGAAAGACTTaaactaaaattatctacccattcagtccatcaacatataaatagagaaaataagccattttcagatttgcaaaataccaaa-gtttgattttcacgtaaccttcctcaaaaagttattgaggatgtttactctgaaacaaaatggagtaatagaaactagatttaatctcttctttgatacaaacaaaaaacagacaaaaaaataa-taagaaagccatttgaaagacactgaacatcaggcaacaaaggtaaatcctaatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaaactcagacggagcccagaggctccctgagttgaggacacagagatgagactccagagagatgaagaaggaagttagagtttctaggaaagagtaccagagaggagagagctcacaggacgaaacccagagagctgcagaatatgccccacaagtagtgatcagtgctataaatgagaagactacccaaagtagggggaaaaacacctaaaagg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4427821 557 + 32716333 TGAAAGAACAAT---AAAAAAATTTAAGAATTGAAAGACTTaaactaaaattatctacccattcagtccatcaacatataaatagagaaaataagccattttcagatttgcaaaataacaaa-ttttgattttcacgtaaccttcctcaaaaagtttttgaggatgtttactctgaaccaaaatggagtaatagaaactagacttaatctcttccttgatacaaacataaaacagac--aaaaataa-tgagaaagccatttgaaagacactgaacatcaggcaacaaaggtaaatcctaatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaaa--cagatggagcccggaggctccctgagttgaggacacagagatgaggctccagagagatgaag---gcaggtagaatttctaggaaacagtaccagagaggggagagctcacaggatgaaacccagagagctgcagaatgtgccccacaagtagtgatcagtgctgtaagtgagaagactacccaaagtaggggaggaaacacccaaaagg i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162205281 562 - 192294377 TGAAAGAACAACAGAAAAAAAATTTAAGAATTAAAAGACTTAAACTAAAATTGTCTACCCATTCAGTCCATCAACATATCAACAGAGAAAATAAGCCATTTTCTGATTTGCAAAGTACCAAA-TTTTGATTTTCATGTAACCTTCctcaaaaagttattgaggatgtttgctttgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaataaaaaacagac--aaaaataattgagaaagccatttgaaaaacactgaacatcaggcaacaaaggaaaatccttatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaaactcagatggagcccggatgctccctgagttgaggacacagagatgagactccagagagatgaag---gcaggtagagtttctaggaaagagtatcagagaggagatagctcacaggacgaaacccagagagctgcagaatgtgccccacaagtaccaatcagtgctataagtgagaagactacccaaagtagggg-gaaaacacccaaaagg i macFas5.chr3 I 4 C 0 s macNem1.NW_012019910v1 8682501 562 + 9440265 TGAAAGAACAACAGAAAAAAAATTTAAGAATTAAAAGACTTAAACTAAAATTGTCTACCCATTCAGTCCATCAACATATCAACAGAGAAAATAAGCCATTTTCTGATTTGCAAAGTACCAAA-TTTTGATTTTCATGTAACCTTCctcaaaaagttattgaggatgtttgctttgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaataaaaaacagac--aaaaataattgagaaagccatttgaaaaacactgaacatcaggcaacaaaggaaaatccttatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaaactcagatggagcccggatgctccctgagttgaggacacagagatgagactccagagagatgaag---gcaggtagagtttctaggaaagagtatcagagaggagacagctcacaggacgaaacccagagagctgcagaatgtgccccacaagtaccaatcagtgctataagtgagaagactacccaaagtagggg-gaaaacacccaaaagg i macNem1.NW_012019910v1 I 36 C 0 s cerAty1.NW_012002954v1 8413118 560 + 21915920 TGAAAGAACAATAG-AAAAAAATTTAAGAATTAAAAGACTGAAACTAAAATTGTCTACCCATTCAGTCCATCAACATATCAACAGAGAAAATAAGCCATTTTCTGATTTGC-AAGTACCAAA-TTTTGATTTTCATGTAACCTTCctcaaaaagttattgaggatgtttgctttgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaataaaaaacagac--aaaaataattgagaaagccatttgaaagacactgaacatcaggcaacaaaggaaaatccttatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaaactcaggtggagcccggatgctccctgagttgaggacacagagatgagactccagagagatgaag---gtaggtagagtttctgggaaagagtaccagagaggagagagctcacaggacaaaacccggagagctgcagaatgtgccccacaagtaccgatcagtgctataagtgagaagactacccaaagtagggg-gaaaacacccaaaagg i cerAty1.NW_012002954v1 I 23 C 0 s chlSab2.chr2 14989728 562 - 90373283 TGAAAGAACAATAGAAAAAAAATTTAAGAATTAAAAGACTTaaactaaaattgtctacccattcagtccatcaacatatcaacagagaaaataagccattttcagatttgcaaagtaccaaa-ttttgattttcatgtaaccttcctcaaaaagttattgaggatgtttactttgaaccaaaatggagtaatagaaactagatttaatctcttccttgacacaaataaaaaacagac--aaaaataattgagaaagccatttgaaagacactgaacatcaggcaacaaaggaaaatccttatattaccccagtttaccaccttgaga--gtttacag-atctaaaatgagtaatgaaaaactcagatggagcccggatgctccctgagttgaggacacagagatgagactccagagagatgaag---gcaggtagagtttctaggaaagagtaccagagaggagagagctcacagggcgaaacccagagagctgcagaatgtgccccacaagtaccgatcagtgctataagtgagaagactacccaaagtagggg-gaaaacacccaaaagg i chlSab2.chr2 I 36 C 0 s manLeu1.NW_012102865v1 2162008 561 + 4234846 TGAAAGAACAATAG-AAAAAAATTTAAGAATTAAAAGACTTAAACTAAAATTGTCTACCCATTCAGTCCATCAACATATCAACAGAGAAAATAAGCCATTTTCTGATTTGCAAAGTGCCAAA-TTTTGATTTTCATGTAACCTTCctcaaaaagttattgaggatgtttgctttgaaccaaaatggagtaatagaaactagatttaatctcttccttgatacaaataaaaaacagac--aaaaataattgagaaagccatttgaaagacactcaacatcaggcaacaaaggaaaatccttatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaagaactcagatggagcccggatgctccctgagttgaggacacagagatgagactccagagagatgaag---gtaggtagagtttctaggaaagagtaccagagaggagagagctcacaggacgaaacccagagagctgcagaatgtgccccacaagtaccgatcagtgctataagtgagaagactacccaaagtagggg-gaaaacacccaaaagg i manLeu1.NW_012102865v1 I 36 C 0 s colAng1.NW_012120598v1 164119 560 - 13750039 TGAAAGAACAATAG--AAAAAAATTAAGAATTAAAAGACTTaaactaaaattgtctacccattcagtccatcaacatatcaacagagaaaataagccattttcagatttgcaaagtaccaag-ttttgattttcatgtaaccttcctcaaaaagttattgaagatgtttactttgaaccaaaatggagtaatagaaactagatttaatctcttccttgatagaaataaaaaacagac--aaaaataattgagaaagccatttgaaagacactgaacatcaggcaacaaaggaaaatccttatattaccccagtttaccaccttgaga--gtttacag-atccaaaatgagtgatgaaaacctcaggtggagcccagatgctccctgagttgaggacacagagatgagactccagagagatgaag---gcaggtagagtttctaggaaagagtaccagagaggagagagctcacaggatgaaacccagagagctgcagaatgtgccccacaagtaccgagcagtgctatcagtgacaagactacccaaagtagggg-gaaaacacccaaaagg i colAng1.NW_012120598v1 I 36 I 369 s calJac3.chr21 21921418 555 + 50472720 TGAAAGAAAAATAGAAAAAATTCTTAAG------AAGACTTAAACCAAAATTACCTGCCCATTCAGTTCATCAACATATCAATAGAGAAAAAAAGGCATTTTCATATTTGAAATGTACTAAA-TTTTAGTTTTCATGTAACCTTTCTCAAACAG---TTGAGGATGTTTACATTGAgccaaaatggaataatagaaattagatttactctcttccttgatgccaataaaaagcagaa--aaaaataattaagaaagccatttaatagacactgaacatcaggcaataaaggtaaatcctaatattaccccagtttaccaccctgagagagtttacagaacccaaaatgagtgaagaaaaactcagatggag-ctggaggctctctgtgttggggacacagagatgagactccagggagatgaag---gcagct-gaatttctaggaatgagtaccagagaggagagagctcacaggaagaaacccaaagagctgcagagtgtgccccacaactactgatcagtgctataagtgagaagactacccaaagtagcaggaaaaacacccaaaagg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5025130 559 + 13128814 TGAAAGAAAAATAGAAaaaattcttaagaatt--aagacttaaaccaaaatcatctgcccattcagtccatcaacatatcaatagagaaaagaaggcattttcagattttaaatgtactaaa-ttttagttttcatgtaacctttctcaaaaag---ttgaggatgtTTACATTGAgccaaaatggagtaatagaaatcagatttactcccttccttgatgccaacaaaaagcagaa--aaaaataattaagaaagtcatttaaaagacactgaacatcaggcaataaaggtaaatcctaatattaccccagtttaccgccttgagagagtttacagaacccaaaatgagtgaagaaaaactcagatggag-ctggaggctctctgtgttggggacacagagatgagactccagggagatgaag---gcagct-gagtttctaggaatgagtatcagagaggagagagctcacaggaagaaacccagagagctgcagagtgtgccccacaagtactgatcagtgccagaagtgagaagactacccaaagtagcaggaaaaacacccaaaagg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9601444 555 - 14377064 TGAAAGAAAAATAGAAaaaattcttaagaatt--aagacttaaaccgaaattatctgcccattcattccatcaacatatcaatagagaaaagaaggcattttcagattggcaatgtaccaaa-ttttagttttcatgtaacctttctcaaaaag---ttgaggatgtTTACATTGAgccaaaatggagtaacagaaattagatttactctcttccctgatgccaacaaaaagcagaa--aaaaa----taagtaagccatttaaaagacactgaacatcaggcaataaaggtaaatcctaatattgccccagtttaccaccttgagagagtttacagaacccaaaatgagtgaagaaaaactcagatggag-ctggaggctctctgtgttggggacacagagatgagactccagggagatgaag---gcagct-gagtttctaggaatgagtgccagagaggagagagctcacagcaagaaacccagagagctgcagagtgtgccccacaagtactgatcagtgctataagtgagaagattacccaaagtagcaggaaaaacacccaaaagg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8738023 558 + 9889416 TGAAAGAAAAATAGAAAAAATTCTTAAGAATT--AAGACTTAAACCAAAATTATTTG-CCATTCAGTCCATCAACACATCAATAGAGAAAAGaaggcattttcagatttgaaatgtactaaa-ttttagttttcatgtaacctttctcaaaaag---ttgaggatgtTTACATTGAgccaaaatggagtaatagaaattagatttactctcttccttgatgccaacaaaaagcagaa--aaaaataattaagaaagccatttgaaagtcactgaacatcaggcaataaaggtaaatcctaatattaccccagtttaccaccttgagagggtttacagaacccaatatgagtgaagaaaaactcagatggag-ctggaggctctctgtgttggggacacagagatgagactccagggagatgaag---gcagct-aagtttctaggaatgagtaccagagaggaaagagctcacaggaagaaacccagagagctgcagagtgtgccccacaagtactgatcagtgctataagtgagaagactacccaaagtagcaggaaaaacacccaaaagg i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=14658.000000 s hg38.chr21_KI270874v1_alt 54936 3 + 166743 gca s panTro5.chr21 3679442 3 + 33445071 gca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17306365 3 + 46275980 gca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3245386 3 - 13858734 gca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4428378 3 + 32716333 aca i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162205843 3 - 192294377 acg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8683063 3 + 9440265 acg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8413678 3 + 21915920 acg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14990290 3 - 90373283 acg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2162569 3 + 4234846 acg i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21921973 3 + 50472720 gca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5025689 3 + 13128814 gca i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9601999 3 - 14377064 gca i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8738581 3 + 9889416 gca i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 164679 369 - 13750039 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=783579.000000 s hg38.chr21_KI270874v1_alt 54939 92 + 166743 gtgttaacagcatctgcttctcacacagggatggtaagaggacctcatctcacccagcaatctgggaaacctctttgtttacaggcattgga s panTro5.chr21 3679445 92 + 33445071 gtgttaacagcatctgcttctcacacagggatggtaagaggacctcatctcacccagcaatctgggaaacctctttgtttacaggcattgga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17306368 92 + 46275980 gtgttaacagcatctgcttctcacacagggatggtaagaggacctcatctcacccagcaatctgggaaacctctttgtttacaggcattgga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3245389 92 - 13858734 gtgttaacagcatctgcttctcacacagggatggtaagaggacctcgtctcacccagcaatctgggaaacctctttgtttacaggcattgga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4428381 92 + 32716333 gtgttaacagcatctgcttctcacacagggatggtaagaggacctcatctcacccagcaatctgggaaacctctttgtttacaggcattgga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162205846 92 - 192294377 gtgttaacagcatctgcttctcacacaggaatggtaaaaggaccttgtctcacccagaaatctgggaaacctttttgtttacaggcattggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8683066 92 + 9440265 gtgttaacagcatctgcttctcacacaggaatggtaaaaggaccttgtcttacccagaaatctgggaaacctttttgtttacaggcattggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8413681 92 + 21915920 gtgttaacagcatctgcttctcacacaggaatggtaaaaggaccttgtctcacccagaaatctgggaaacctttttgtttacaggcattggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14990293 92 - 90373283 gtgttaacagcatctgcttctcacacaggaatggtaaaaggaccttgtctcacccagaaatctgggaaacctttttgtttacaagcattggg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2162572 92 + 4234846 gtgttaacagcatctgcttctcacacaggaatggtaaaaggaccttgtctcacccagaaaactgggaaacctttttgtttacaggcattggg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 165048 92 - 13750039 GTGTTaacagcatctgcttctcacacaggaatagtaaaaggaccttgtctcacccagaaatctgggaaacctttttgtttacaggcgttggg i colAng1.NW_012120598v1 I 369 C 0 s calJac3.chr21 21921976 78 + 50472720 gtgttaacagcatatgcttctcacacagggatggtaaga-ggcctcttctcacccagcaatctgggaaaccgctttgtt------------- i calJac3.chr21 C 0 I 5 s saiBol1.JH378168 5025692 90 + 13128814 --gttaacagcatatgcttctcacacagggatggtaagagggcctcttctcacccagcaatctgggaaacctctttgtttacaggcattgga i saiBol1.JH378168 C 0 I 11 s cebCap1.NW_016107322v1 9602002 92 - 14377064 gtgttaacagcttatgcttctcacatagggatggtaagagggcctcttctcacccagcaatctgggaaaccactttgtttacagacattgga i cebCap1.NW_016107322v1 C 0 I 18 s aotNan1.NW_018487195v1 8738584 92 + 9889416 gtgttaacagcatatgcttctcacacagggatggtaagagggcctcttctcacccagcaatctgggaaaccactttgtttacaggcattgga i aotNan1.NW_018487195v1 C 0 I 18 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=27980.000000 s hg38.chr21_KI270874v1_alt 55031 7 + 166743 ---taggata s panTro5.chr21 3679537 7 + 33445071 ---taggata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17306460 7 + 46275980 ---taggata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3245481 7 - 13858734 ---taggata i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4428473 7 + 32716333 ---taggata i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162205938 7 - 192294377 ---taggata i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8683158 7 + 9440265 ---taggata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8413773 7 + 21915920 ---taggata i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14990385 7 - 90373283 ---taggata i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2162664 7 + 4234846 ---taggata i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 165140 7 - 13750039 ---tgggata i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21922059 7 + 50472720 tgacagg--- i calJac3.chr21 I 5 C 0 s saiBol1.JH378168 5025793 7 + 13128814 ttacagg--- i saiBol1.JH378168 I 11 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e aotNan1.NW_018487195v1 8738676 18 + 9889416 I e cebCap1.NW_016107322v1 9602094 18 - 14377064 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=9122546.000000 s hg38.chr21_KI270874v1_alt 55038 1139 + 166743 cacagaaggatctcatctctggag----tacttttccagccctcttaacacatccaagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactgcatgctc-aaaaaaactcaagaatatttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatccat-caaccaatcaaaaattgccagtc---agacaaaaagcaggaaaatgtgattcattgtaaagcaatagagcaatcaatattaaactgacccagaactgaaaaagatgttagaattagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaaattgagtagacacatggaagatatcttttttaactcaaatcaaacatctaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagagaaaaaaagaaaatgaatttttaaaaaaccattggtagctgtgagacaacttcaagcagccgaacata--------tgtgtatttagagtcttccatggaaaagagaaagaggaggaaaaagaacaaatattttaataaat---aacc-tcaaaaactatccaaatttgatgaaaactataaatcc--------acagtct-----------------aaaaagttcaatgaaccctgaacacaaaaaatgtgaggaaaactgcataagaatacatcataataaaattgctaaaagccggtgataaacagaaagtcttaaaagcagccaaagtaaaagcaaacactatgttcagatg-aagagacatcaagataagagcata--ttttttgttggaaacaatgcaagtgaaaagacaggagagt-aatatatttaaagtactaaaggaagagaaaactgtcaacttaaaaatctatacctgagagataatatctttgaaaatatcaatgaaaat-aaaagattattttcgaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACCaacaaataattaagttgaacaaattcctaatatttgaaaac-aaaaaaaatca-ctttctaaataattcataggcctaaaaaaa--ttaaaagaacaaattcgagtgtattttaaacagaataaaaat s panTro5.chr21 3679544 1139 + 33445071 cacagaaggatctcatctctggag----tacttttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaaactcaagaatatttataggaaacaaaagttcaccggacccaaaaaaggaaaatgcataatatccat-caaccaatcaaaaattgccagtc---agacaaaaagcaggaaaatatgattcattgtaaagcaatagagcaatcaatattaaactgacccagaactgaaaaagatgttagaattagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaaattgagtagacacatggaagatatcttttttaactcaaatcaaacatctaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagagaaaaaaagaaaatgaatttttaaaaaaccattggtagctgtgagacaacttcaagcagccgaacata--------tgtgtatttagagtcttccatggaaaagagaaagaggaggaaaaagaaaaaatattttaataaat---aacc-tccaaaactatccaaatttgatgaaaactataaatcc--------acagtct-----------------aaaaagttcaatgaaccctgagcacaaaaaatgtgaggaaaactgcataagaatacatcataataaaattgctaaaaaccggtgataaacagaaagtcttaaaagcagccaaagtaaaagcaaacactatgttcagatg-aagagacatcaagataagagcata--ttttttgttggaaacaatgcaagtgaaaagacaggagagt-aatatatttaaagtactaaaggaagagaaaactgtcaacttcaaaatctatacctgagagataatatctttgaaaatatcaatgaaaat-aaaagattattttcaaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACCAACAAATAATTAAGTTGAACAAATTCCTAATATTTGAAAAC-AAAAAAAATCA-CTTTCTAAATAATTCATAGGCCTAAAAGAA--TTAAAAGAACAAATTCGAGTGTATTTTAAACAGAATAAAAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17306467 1137 + 46275980 cacagaaggatctcatctctggag----tacttttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaaactcaagaatatttataggaaacaaaagttcaccagacccaaaaaaggaaaatgcataatatccat-caaccaatcaaaaattgccagtc---agacaaaaagcaggaaaatatgattcattgtaaagcaatagagcaatcaatattaaactgacccagaactgaaaaagatgttagaattagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaaattgagtagacacatggaagatatcttttttaactcaaatcaaacatctaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagagaaaaaaagaaaatgaatttttaaaaaaccattggtagctgtgagacaacttcaagcagccgaacata--------tgtgtatttagagtcttccatggaaaagagaaagaggaggaaaaagaa-aaatattttaataaat---aacc-tccaaaactatccaaatttgatgaaaactataaatcc--------acagtct-----------------aaaaagttcaatgaaccctgagcacaaaaaatgtgaggaaaactgcataagaatacatcataataaaattgctaaaaaccggtgataaacagaaagtcttaaaagcagccaaagtaaaagcaaacactatgttcagatg-aagagacatcaagataagagcata--ttttttgttggaaacaatgcaagtgaaaagacaggagagt-aatatatttaaagtactaaaggaagagaaaactgtcaacttcaaaatctatacctgagagataatatctttgaaaatatcaatgaaaat-aaaagattattttcaaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACCAACAAATAATTAAGTTGAACAAATTCCTAATATTTGAAAAC--AAAAAAATCA-CTTTCTAAATAATTCATAGGCCTAAAAGAA--TTAAAAGAACAAATTCGAGTGTATTTTAAACAGAATAAAAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3245488 1140 - 13858734 cacagaaggatctcatctctagag----tacttttccagccctcttaacacatcctagaagcaagaactcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaaactcaagaatatttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatccat-caacaaatcaaaaattgccagtc---agacaaaaagcaggaaaatatgattcattgtaaagcaatacagcaatcaatattaaactgacccagaactgaaaaagatgttagaattagcagacacatacatttaaaatgtaattgttactatattccatatgtccagaaaattgagtagacacatggaagatatcttttttaactcaaatcaaacatctaaagatgaagatactggagaaaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacagagagaaaaaaagaaaatgaa-ttttaaaaaaccattggtagctgtgagacaacctcaagcagccgaacata--------tgtgtatttagagtcttccatggaaaagagaaagaggaggaaaaagaaaaaatattttaataaat---aacc-tccaaaactatccaaatttgatgaaaactataaatcc--------acagtct-----------------aaaaagttcaatgaaccctgagcacaaaaaatatgaggaaaactgcataagaatacatcataataaaattgctaaaaaccggtgataaacaaaaagtcttaaaagcagccaaagaaaaagcaaacactatgttcagatg-aagagacatcaagataagagcata--ttttttattggaaacaatgcaagtgaaaagacaggagagt-aatatatttaaagtactaaaggaagagaaaactgtcaacttcaaaatctacacctgagagataatatctttgaaattatcaatgaaaataaaaagattatttttgaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACCAACAAATAATTAAGTTGAACAAATTCCTAATATTTGAAAACAAAAAAAAATTA-CTTTCTAAATAATTCATAGGCCTAAAAAAA---TAAAAGAACAAATTTGAGTGTATTTTAAACAGAATAAAAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4428480 1135 + 32716333 cacagaaggatctcatctctagag----tacttttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaagctcaagaatatttataggaaacaaaagtgcaccagacccaaaaaaggaaaatgcataatatctat-caaccaatcaaaaattgccagtc---agacaaaaagcaggaaaatacgattcattgtaaagcaatagagcaatcaatattaaactgacccagaactgaaaaagatgttagaattagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaagttgagtagacacatggaagatctcttttttaactcaaatcaaacatgtaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaataggaaacatagagaaaaaaagaaaatgaatttttaaaaaaccattggtagctgtgagacaacttcaagcagccgaacata--------tgtgtatttagagtcttcgatggaaaagagaaagaagaggaaaaagaaaaaatattttaataaat---aacc-tccaaaactatccaaatttgatgaaaactataaatcc--------acagtct-----------------aaaaagttcaatgaaccctgagcacaaaaaatatgaagaaaactgcataagaatacatcataacaaaattgctaaaaaccggtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacactatgttcagatg-aagagacatcaagataagagcata--ttttttgttggaaacaatgcaagtgaaaaggcagtagagc-aatatattcaaagtactaaaggaagagaaaactgtcaacttcaaaatctatacctaagagataatatctttgaaaatatttatgaaaat-aaacgattattttcaaagtcaaaataaagattattttcagacatacaaaagccacaggaatttatctcaaacaTACC----AATAATTAAGTTGAACaaattcctaatatttgaaaac--aaaaaaatca-ctttctaaataattcataggcctaaaaaaag-ttaaaagaacaaatttgagtgtattttaaacagaataaaaat i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162205945 1133 - 192294377 cacagaaggatttcatctctagca----tacatttccagccctcttaacacaccctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaaactcaagaatgtttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatccat-caaccaatcaaaaattgccagac---agacaaaaagcaggaaaatatgactcattatgaagcaatagagcaatcaatattaaactgactcggaactgatacagatgttagaatcagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaagtttggtcgacacatgggagatatcttttttaactcaaatcaaacatctaaagatgaagatactggagaaaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagtgaaaaaaagaaaatgaatttttaaaaaagcattggtagtcgtgagacaacttcaagcagcccaacata--------tgcgtatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatattttaataaat---aacc-tccaaaattatccaaatttgatgaaaactataaatac--------acagtcta----------------aaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaaactgcctaagaatacattgtactaaaattgctaaaaaccagtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacaatgtgttctgatg-atgagacatcaagataagggcata-tttttttgttggaaacaatgcaagtgaaaagacagtagagc-agtatatttaaagtactaaaagaagagaaaactatgaacctcaaaatctatacctgagag---atatttttgaaaatatcaatgaaaat-aaaagattatttttaaagtcaaaataaagattatttccagacatacaaaagccacaggaatttatctcaa-----tcaacaaatAATTAAGTTGAATGAATTCCTAATATTTGAAAAC--CAAAAGATCA-CTTCCTACATAATTCAGAGGTCTAAAAAAA--TTAAAAGAACAAATTTGAGTGTATTTTAAACAGAATAAAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8683165 1133 + 9440265 cacagaaggatttcatctctagca----tacatttccagccctcttaacacaccctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaaactcaagaatgtttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatccat-caaccaatcaaaaattgccagac---agacaaaaagcaggaaaatatgactcattatgaagcaatagagcaatcaatattaaactgactcggaactgatacagatgttagaatcagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaagtttggtcgacacatgggagatatcttttttaactcaaatcaaacatctaaagatgaagatactggagaaaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagtgaaaaaaagaaaatgaatttttaaaaaagcattggtagtcgtgagacaacttcaagcagcccaacata--------tgcgtatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatattttaataaat---aacc-tccaaaattatccaaatttgatgaaaactataaatac--------acagtcta----------------aaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaaactgcctaagaatacattgtactaaaattgctaaaaaccagtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacaatgtgttctgatg-atgagacatcaagataagagcata-tttttttgttggaaacaatgcaagtgaaaagacagtagagc-agtatatttaaagtactaaaagaagagaaaactatgaacctcaaaatctatacctgagag---atatttttgaaaatatcaatgaaaat-aaaagattatttttaaagtcaaaataaagattatttccagacatacaaaagccacaggaatttatctcaa-----tcaacaaatAATTAAGTTGAATGAATTCCTAATATTTGAAAAC--CAAAAGATCA-CTTCCTACATAATTCAGAGGTCTAAAAAAA--TTAAAAGAACAAATTTGAGTGTATTTTAAACAGAATAAAAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8413780 1139 + 21915920 cacagaaggatctcatctctagca----tacatttccagccctcttaacacatcctagaagcaaaatctcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaaactcaagaatgtttataggaaacaaaagtgcaccggacccataaaaggaaaatgcataatatccat-caaccaatcaaaaattgccagac---agacaaaaagcaggaaaatatgactcattatgaagcaatagagcaatcaatattaaactgactcggaactgatacagatgttagaatcagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaagtttggtcgacatatgtgagatatcttttttaactcaaatcaaacatctaaagatgaagatactggagaaaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagtgaaaaaaagaaaatgaatttttaaaaaagcattggtagtcgtgacacaacttcaagcagcccaacata--------tgcgtatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatattttaatgaat---aacc-tccaaaattatccaaatttgatgaaaactataaatac--------acagtcta----------------aaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaaactgcctaagaatacattgtactaaaattgctaaaaaccagtgataaacagaaagtcttaatagcagccaaagaaaaagcaaacaatgtgttctgatg-atgagacatcaagataagagcatattttttttgttggaaacaatgcaagtgaaaagacagtagagc-agtatatttaaagtactaaaagaagagaaaactatgaacctcaaaatctatacctgagag---atatttttgaaaatatcaatgaaaat-aaaagattattttcaaagtcaaaataaagactatttccagacatacaaaagccacaggaatttatctcaaacaTGTCAACAAATAATTAAGTTGAATGAATTCCTAATATTTGAAAAC--CAAAAGATCA-CTTCCTACATAATTCAGAGGTCTAAAAAAA--TTAAAAGAACAAATTTGAGTGTATTTTAAACAGAATAAAAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14990392 1137 - 90373283 cacagaaggatctcatctctagca----tacatttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaaactcaagaatgtttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatccat-caaccaatcaaaaattcccagac---agacaaaaagcaggaaaatatgactcattatgaagaaatagagcaatcaatattaaactgactcggaactgatacagatgttagaatcagcagacacatacatttaaaatattattgttactatattccatatgtccagaaagtttggtcgacacatgggagatatcttttttaactcaaatcaaacatctaaagatgaagatactggag-aaaaaatgaacttgaagatataataatagaaactatccaaatatgaatcatagagaaaaaaagaaaatgaatttttaaaaaagcattggtagtcgtgagacaacttcaagcagcccaacata--------tgcgtatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatattttaataaat---aacc-tccaaaactatccaaatttgatgaaaaccataaatac--------acagtcta----------------aaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaaactgcctaagaatacattgtactaaaattgctaaaaaccagtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacaatgtgttctgatg-acgagacatcaagataagagcata-tttttttgttggaaacaatgcaagtgaaaagacagtagagc-agtatatttaaagtactaaaagaagagaaaactatcagcctcaaaatctatacctgagag---atatctttgaaaatatcaatgaaaat-aaaagataattttcacagtcaaaataaatattatttccagacatacaaaagccacaggaatttatctcaaacatatcAACAAATAATTAAGTTGAATGAATTCCTAATATTTGAAAAC--CAAAAGATCA-CTTCCTAAATAATTCAGAGGTCTAAAAAAA--TTAAAAGAACAAATTTGAGTGTATTTTAAACAGAATAAAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2162671 1135 + 4234846 cacagaaggatctcatctctagca----tacatttccagccctcttaacacatcctagaagcaaaatctcaaaggatcaatctgctttcaagtaacttgactccatgccc-aaaaaaactcaagaatgtttataggaaacaaaagtgcaccggacccaaaaaaggaaaatgcataatatccat-caaccaatcaaaaattgccagac---agacaaaaagcaggaaaatatgactcattatgaagcaatagagcaatcaatattaaactgactcggaactgatacagatatcagaatcagcagacacatacatttaaaatgttattgttactatattccatatgtccagaaagtttggtcgacacatgggagatatcttttttaactcaaatcaaacatctaaagatgaagatactggagaaaaaaatgaacttgaagatataataatagaaactatccaaatatgaaacatagtgaaaaaaagaaaatgaatttttaaaaaagcattggtagtcgtgagacaacttcaagcagcccaacata--------tgcgtatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatattttaataaat---aacc-tccaaaattatccaaatttgatgaaaaccataaatac--------acagtcta----------------aaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaaactgcctacaaatacattgtactaaaattgctaaaaaccagtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacaatgtgttctgatg-atgagacatcaagataagagcata-tttttttgttggaaacaatgcaagtgaaaagacagtagagc-agtatatttaaagtactaaaagaagagaaaactatgaaccttaaaatctatacctgagag---atatttttgaaaatatcaacgaaaat-aaaagattatttttaaagtcaaaataaa---gatttccagtcatacaaaagccacaggaatttatctcaaacatatcAACAAATAATTAAGTTGAATGAATTCCAAATATTTGAAAAC--CAAAAGATCA-CTTCCTACATAATTCAGAGGTCTAAAAAAA--TTAAAAGAACAAATTTGAGTGTATTTTAAACAGAATAAAAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 165147 1162 - 13750039 cacagaaggatctcatctctagcg----tacttttccagccctcttaacacatcctagaagcaaaaactcaaaggatcaatctgctttcaagtaacttgactccaagccc-aaaaaagctcaaaaatatttataggaaaccaaagtgcaccggacccaaaaaaggaaaatgcataatatccat-caaccaatcaaaaattgccagac---agacaaaaagcaggaaactatgacccattatgaaacaatagagcaatcaatattaaactgactcggaactgatacagatgttagaatcagcagacacatacatttaaaatgttattgttactatattccacatgtccagaaagtttggtcgacacatgggggatatcttttttaactcaaatcaaacatctaaagatgaagatactggagaaaaaaatgaacttgaagatataataatagaaactaaccaaatatgaaacgtagagaaaaaaagaaaatgaatttttaaaaaagcgttagtagttgtgagacaacttcaagcagcccaacata--------tgcatatttagagtcttgcatggaaaggagaaagaggaggaaaaagaaaaaatattttaataaat---aacc-tccaaaactatccaaatttgatgaaaactataaatacatataaatatagtatatttatttataaaatataaaaaagtcaatgaaccctgagcacaaaaaaaatgaggaaacctgcctaagaatacattgcactaaaattgctaaaaaccagtgataaacagaaagtcttaaaagcagccaaagaaaaagcaaacaatgtgttctgatg-acgagacatcaagataagagcata-tttttttgttggaaacaatgcaagtgaaaagacagtagagc-agtatatttaaagtactaaaagaagagaaaactatcaacctcaaaatctatacctgagag---atatctttgaaaatatcaatgaaaat-aaaagattattttcaaagtcaaaataaatattatttccagacatacaaaagccacaggaatttatctcaaacatatGAACAAATAATTAAGTTGAACGAATTCCTAACATTTGAAAAC--CAAAAGATCA-CTTCCTAAATAATTCACAGGTCTAAAAAAA--TTAAAAGAACAAATTTGAATGTATTTTAAACAGAATAAAAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21922066 1095 + 50472720 cacagaagaatctcatctctagagagtatacttctccagccctcttaacacatcctagaatcaaaaactcaaaggatcaatctgctttcaagtaacttgattccatgccc-aaaaaagctagagaatattcataggaaacaaaagtgcaccaaacccaacaaaggaaaatgcataatatccattcaaccaatcaaaaattgccaga----aaaaaaaaacag-aaaaatatgactcattatgaagcattagagcaatcaata-taaaccatcccagagctgatacagatgttagaattagcagacacatatatttaaaatgttattgttactatattccatatgtccagaagtttgagtagacacctgggagatgtc-tttgtaacttaaatcaaacatttgaagatgaagatactggag-aaaaaatgaacttgaagatgtaaaaattgaaactatcc-aatataaaacatagaggacaa---aaaatgaa-ttttaaaagagcattaggagctgtgagacaacttcaagcaacccaaccta----------tgtgtttagagtcttccattgagaagag--------gaaaaaggaaaaaatattttaatagat---aacc-tcccaaactatccaaatttgatgaaaactataaatcc--------actttct-----------------aaaaagtacaatgaaccctcagcacaaaaaatatgaagaaaagtgcataagaatacatcataataaaattgctaaaaaccagtaataaacagaaagtcttaaaagcagcc------------------atgtacagatgaaagaaacatcaagctaacagcaca--gtctttgttggtaacaatgcaagtaaaaagacaatagagt-aatatatttaaagtactaaaggaagagaaaactgtcaactccaaaagctatgcctgataaataatgtatgtgaaaatatcaaggaaagt-aaaagatcattttcaaagtcaaaata------attttcagatatac-aaagccacaggaatttatctcaaacataccagcaAATAATTAAATTCAACAAATTCCTAATATTTGAGAAA--AAAAA------CTTTCTAAATAATTCATGGCCCTAAAATAA--TTGAAAGAACAAATTAGAGTATATTTTAAATGGAATAAAAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5025800 1139 + 13128814 cacagaaggatctcatctctagagacagtacttctccagccctcttaacacatccttgaatcaaaaactcaaaggatcaatctgctttctagtaacttgatttcatgccc-aaaaaagctcaagaatattcataggaaacaaaagtgcaccggacccaacaaaggaaaatgcataatatccatccaaccaatcaaaaattgccagac---acacaaaaaaca-aaaaatatgactcattatgaagcattagagcaatcaata-taaaccaaggcagaactgatacagatgttagaattagcagacacgtacatttaaaatgttattgttactatattccatatgtccagaagtttgagtagacacctgggagatatc-tttgtaactaaaatcaaacatctaaagatgaagatactagag-aaaaaatgaacttgacgatataaaaatagaaactaccc-aatataaaacattgagaaaaaaacaaaatgaatttttaaaagagaattagtagctctgagacaacttcaagcaacttaacctatgtgtgtttgtgtgtttggagtcttccacggagaagag--------gaaaaa-gaaaaaatattttaataggttaaaactatccaaaactatccaaatttgatgaaaaccataaatcc--------actttct-----------------aaaaagttcaatgaaccctaagcacaaaaaatatgaagaaaagtacataagaatacatcataataaaattgct-aaaaccagtgataaacagaaagtcttaaaagcggccaaagaaagagcaaacactatgtacagacgaaagagacatcaagctaattgcaca--ttttttgttggtaacaatgcaagtaaaaagacagtagagt-aatatattt-aagtactaaaagaagagaaaactgtcaactccaaaaactatgcctgataaataatgtatgtgaaaatatcaaggaaaat------atcattttcaaagtcaaaataaatattattttcagacatacaaaagccacaggaatttatctcaaacataacaacaaataattaaattaaacaaattcctaatatttgaaaaa--aaaaaaaaaacctttctaaatagttcatggccctaaaaaaaatttgaaagaacaaattagagtgtattttaaacagaataaaaat i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9602112 1135 - 14377064 cacagaaggatctcatctctagagagactacttctccagccctcttaacacatcctagaatcaaaaactcaaaggatcaatctgctttcaagtagcttgattccatgcccaaaaaaagctcaagaatattcataggaaacaaaagtgcaccggacccaacaaaggaaaatgcataatatccaactaaccaataaaaaattgccagacagaaaaaaaaaaaca-aaaaatatgactcattatgaagcattagaacaatcaata-taaaccaacccaggactgatacagatgttagaattagcagacacgtacatttaaaatgttattgttactatattccatatgtccagaagtttgagtagacacctgggagatatc-tttgtaacttaaatcaaacatctaaagatgaagatactggag-aaaaaatgaacttgaagatataaaaatagaaactaccg-aatattaaacatagagaaaaaaacaaaatgaatttttaaaagagcattagtagctctgagacaactttaagcaactcaaccta--------tgtatgtttagagtcttccatggagaagaa--------gaaaaagaaaaaaatattttaatagat---aacc-tccaaaactatccaaatttgatgaaaactataaatcc--------tctttct-----------------aaaaagttcaatgaaccctaagcacaaaaaatatgaagaaaagtacataagaatacatcataataaaattactaaaaaccagtgataaacagaaagtcttaaaagcaaccaaagaaagagcaaacactatgtacagatgaaagagacatcaagctaacagcatg--ttttttgttggtaacaatgtaagtaaaaagacagtagagtaaaaatatttaaagtactaaaggaagagaaaactgtaaactccaaaatctatgcctgataaataatgtatgtgaaaatatcaaggaaagt-aaaagatcattttcaaagtcaaaataaatattattttcagacatacaaaagccacaggaatttatctcaaacataccaacaaatagttaaattcaacaaattcctaatatttgaaaaa--aaaaaaaa---ctttctaaataattcatggccctaaaaaaa--ttgaaagaacaaattagagtgtattttaaacagaataaaaat i cebCap1.NW_016107322v1 I 18 I 2245 s aotNan1.NW_018487195v1 8738694 1112 + 9889416 cacagaaggatctcatctctggagagagtac-tctccagccctcttaacacatcctagaatcaaaaactcaaaggatcaatctgctttcaagtaacttgattccatgccc-aaaaaagctcaagaatattcataggaaacaaaagtgcaccggacccaacaaaagaaaatgcataatattcatccaaccaatcaaaaattgccagac---agacaaaaaaca-aaaaatatgactcattatgaagcattagagcaatca--a-taaaacaacccagaactgatacagatgttagaattagcagacacgtacatttcaaatgttattgttactatattccatatgtccagaagtttgagtagacacctgggagatatc-tttgtaacttaaatcaaacatctaaagatgaagatactggagaaaaaaatgaagttgaagatataaaaatagaaactatcc-aatataaaacatagagaaaaaaacaaaatgaa-ttttaaaagagcattagtagctgtgagacaacttcaagcaacccaaccta--------tgtgtgtttagagtcttccatggagaagag--------gaaaaagaaaaaattattttaatagat---aacc-tccaaaactatccaaatttgatgaaaactataaatcc--------actttct-----------------aaaaagttcaatgaaccctaagcacaaaaaatatgaggaaaagtgcataagaatacatcataataaaattgctaaaaaccagtgataaacagaaagtcttaaaagcaatcaaagaaagagcaaacactatgtacagatgaaagcgacatcaagctaacagcaca--ttttttgttggtaacaatgcaagtaaaaagacagtagagt-aatatatttaaagtactaaaggaagagaaaactgtcaactccaaaatctatgcctgataaataatgtatgtgaaaatatcaagaaaaat-aaaagatcattttcaaagtcaaaataaatattattttcagacatacaaaagccacaggaatttatctcaaacataccaacaaataattagattcaacaaattcctaatatttgaaaaa--aaaa-------ctttctaaataattcatggccctaaaaaaa--ttgaaagaacaaattagagtgtattttaaac----------- i aotNan1.NW_018487195v1 I 18 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=4864654.000000 s hg38.chr21_KI270874v1_alt 56177 685 + 166743 g----------------------------aaagtgtgTtttaaaaagaataaaaatagaagtgcaattgttatgggttaaattgtgccctcaccccaaattatgttcttacc-cttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcacttaagttaagataaggtcata----------ctggatagggaaggctcttaacccagtttggttggtgcctttgcaagaaaaggagaaaag----acacacacagagagaataccaactgatgacagagacagaaattagaatgataaaccaccaagctaaggaataccaaggattgttaccacca-cc-agaaactaagaaaggacaaggaaagattctgcccagtgactgcaggagaacattttggtgacatttcgactctggacttctagcctccagaactgtgagagaataaattactgttgtgttaagtgatgcagcatgtggtactttgttacagaaaccctagaaactaatataacatatcaaaatgtatgggatgcccttaaaatagtacttaacatttaatttaacctacttaatatttatacttgaaaataaaagtgatcttgtcaatgacattagcttccaAAGCAGGAAGAGGAGAA-GGAAAAAAATA-----AGTATCTGTGCAGAAATCAATTATCTAGAAATCACGAAACAAGTCAATGAAACCCAAAAC s panTro5.chr21 3680683 685 + 33445071 G----------------------------AAAGTGTGTTTTTAAAAGAATAAAAATAGAAGTGTAATtgttatgggttaaattgtgccctcaccccaaattatgttcttacc-cttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcacttaagttaagataaggtcata----------ctggatagggaaggctcttaacccagtttggttggtgcctttgcaagaaaaggagaaaag----acacacacagagagaataccaactgatgacagagacagaaattagaatgataaaccaccaagctaaggaataccaaggattgttaccacca-cc-agaaactaagaaaggacaaggaaagattctgcccagtgactgcaggagaacattttggtgacatttcgactctggacttctagcctccagaactgtgagagaataaattactgttgtgttaagtgatgcagcatgtggtactttgttatagaaaccctagaaactaatataACATATCAAAATGTATGGGATGCCCTTAAAATAGTACTTAACATTTAATTTAACCTACTTAATATTTATACTTGAAAATAAAAGTGATCTTGTCAATGACATTAGCTTCCAAAGCAGGAAGAGGAGAA-GGAAAAAAATA-----AGTATCTGTGCAGAAATCAATTATCTAGAAATCACGAAACAAGTCAATGAAACCCAAAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17307604 685 + 46275980 G----------------------------AAAGTGTGTtttaaaaagaataaaaatagaagtgcaattgttatgggttaaattgtgccctcaccccaaattatgttcttacc-cttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcacttaagttaagataaggtcata----------ctggatagggaaggctcttaacccagtttggttggtgcctttgcaagaaaaggagaaaag----acacacacagagagaataccaactgatgacagagacagaaattagaatgataaaccaccaagctaaggaataccaaggattgttaccacca-cc-agaaactaagaaaggacaaggaaagattctgcccagtgactgcaggagaacattttggtgacatttcgactctggacttctagcctccagaactgtgagagaataaattactgttgtgttaagtgatgcagcatgtggtactttgttatagaaaccctagaaactaatataacatatcaaaatgtatgggatgcccttaaaatagtacttaacatttaatttaacctacttaatatttatacttgaaaataaaagtgatcttgtcaatgacattagcttcgaaagcaggaagaggagaA-GGAAAAAAATA-----AGTATCTGTGCAGAAATCAATTATCTAGAAATCACGAAACAAGTCAATGAAACCCAAAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3246628 681 - 13858734 G----------------------------AAAGTGTGTTTTAAAAAGAATAAAAATAGAAGTGCAATtattatgggttaaattgtgccctcaccccaaattatgttcttacc-cttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcac-----ttaagataaggtcata----------ctggatagggaaggctcttaacccagtttggttggtgcctttgcaagaaaaggagaaaag----acacacacagagagaataccaactgatgacagagacagaaattagaatgataaaccaccaagctaaggaataccaaggattgttaccacca-ccaaaaaactgagaaaggacaaggaaagattctgcccagtgactgcaggagaacattttggtgacatttcgactctggacttctagcctccagaactgtgagagaatgaattactgttgtgttaagtgatgcagcatgtggtactttgttatggaaaccctagaaactaatataACATATCAAAATGTATGGGAAGCCCTTAAAATAGTACTTAACATTTAATTTAACCTACTTAATATTTATACTTGAAAATAAAAGCGATCTTGTCAGTGACATTAGCTTCCAAAGCAGGAAGAGGAGAA-GGAAAAAAATA-----AGTATCAGTGCAGAAATCAATTATCTAGAAATCACGAAACAAGTCAATGAAACCCAAAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4429615 677 + 32716333 a----------------------------aaagtgtattttaaaaagaataaaaataaaggtgcaattgctatgggttaaattgtgcccttaccccaaattatgttcttacc-cttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcacttaagttaagataaggtcata----------ctggatagggtaggctcttaacccagtttggttggtgcctttacaagaaaaggagaaaag----acacacacacagagaataccaactgatgacagaggcagaaattagaatgataaaccaccaagctaaggaataccaaggattgttgcca-ca-cc-agaaactaagaaaggacaaggaaagattctgcccagtgactgcaggagaacattttggtgatatttcgactctggacttccagcctccagaactgtgagagaataaattactgttgtgttaagtgatgcagcatgtggtactttgttatagaaatcctagaaactaatacaacatatcaaaatgtatgggatgcccctaaaatagtacttaacgtttaatttaacctacttaatatttatacttgaaaataaaaatgatcttgtcaatgacattagcttccaaagcaggaagaggagaa-ggaaaaaaata-----agtatcagtgcagaaatcaattatctagaaatcacaaaacaagtcaatg-------aaac i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162207078 707 - 192294377 TAAAGTGTACTTTAAAAAGAATAAAAATAAAAGTGtattttaaaaagaataaaaataaaactgcaattgttatgggttaaattgtgccctcaccccaaattatgttcttact-gttagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcata----------ctggatagagtaggctcttaacccagtttggttggtgcttttacaagaaaaggagaaaag----acacacacacagagaataccaactgatgacagaggcagaaattacaatgatgaaccaccaagctaaggaataccaacgattgctaccaccc-cc-agaaactaagaaaggacaaggaaagattctgcccaatgactggaggagaacattttggtgatatttcggctctggaattttagcctccagaactgtgagagaataaattattgttgtgttaagtgacacagcatgtggtattttgttatagaagccctagaaactaatacaaaatatcaaaatgtatgggatgcctttaaaatagtacttaacgtttgatttaatgtacttaatatctatacttgaaaataaaaatgatcttgtcaatgacattaacttccaaagcaggaagaggaaaaggaaaaaaaata-----agtatcagtgcagaaatcaattatctagaaatcacaaaacaaatcaatg-------aaac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8684298 707 + 9440265 TAAAGTGTACTTTAAAAAGAATAAAAATAAAAGTGTATTTTAAAAAGAATAAAAATAAAACTGCAATtgttatgggttaaattgtgccctcaccccaaattatgttcttact-gttagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcata----------ctggatagagtaggctcttaacccagtttggttggtgcctttacaagaaaaggagaaaag----acacacacacagagaataccaactgatgacagaggcagaaattacaatgatgaaccaccaagctaaggaataccaacgattgctaccacca-cc-agaaactaagaaaggacaaggaaagattctgcccaatgactggaggagaacattttggtgatatttcggctctggaattttagcctccagaactgtgagagaataaattattgttgtgttaagtgacacagcatgtggtattttgttatagaagccctagaaactaatacaAAATATCAAAATGTATGGGATGCCTTTAAAATAGTACTTAACGTTTGATTTAATGTACTTAATATCTATACTTGAAAATAAAAATGATCTTGTCAATGACATTAAATTCCAAAGCAGGAAGAGGAAAAGGAAAAAAAATA-----AGTATCAGTGCAGAAATCAATTATCTAGAAATCACAAAACAAATCAATG-------AAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8414919 706 + 21915920 AAAAGTGTACTTTAAAAAGGataaaaataaaagtgtattttaaaaagaataaaaataaaactgcaattgttatgggttaaattgtgccctcaccccaaattatgttcttacc-gttagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcata----------ctggatagagtaggctcttaacccagtttggttggtgcctttacaagaaaaggagaaaagacacacacacacacagagaataccaactgatgacagaggcagaaattacaatgatgaaccgccaagctaaggaataccaacgattgctaccacca-cc-agaaact----aaggacaaggaaagattctacccaatgactggaggagaacattttggtgatattttggctctggaattttagcctccagaactgtgagagaataaattattgttgtgttaagtgacacagcatgtggtactttgttataaaagcacttgaaactaatacaaaatatcaaaatgtatgggatgcccttaaaatagtacttaacatttaatttaatgtacttaatatctatacttgaaaataaaaacgatcttgtcagtgacattagcttccaaagcaggaagaggaaaa-gaaaaAAAATA-----AGTATCAGTGCAGAAATCAATTATCTAGAAATCACAAAACAAATCAATG-------AAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14991529 675 - 90373283 A----------------------------AAAGTGtattttaaaaagaataaaaataaaactgcaattgttatgggttaaattgtgccctcaccccaaattttgttcttact-gttagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcata----------ctggatagagtaagctcttaacccagtttggttggtgcctttacaagaaaacaagaaaag----acacacacacagagaataccaactgatgacagaggcagaaattataatgatgaaccaccaagataaggaataccaatgattgctaccacca-cc-agaaactaagaaaggacaaggaaagattctgcccaatgactggaggagaacattttggtgatatttcgactctggaattttagcctccagaactgtgagagaataaatta---ttgtgttaagtgacacagcatgtggtactttgttatagaagccctagaaactaatacaaaatatcaaaatgtatgggatgcccttaaaatagtacttaacatttaatttaatgtacttaatatctatacttgaaaataaaaatgatcttgtcaatgacattagcttccaAAGCAGGAAGAGGAAAA-CGAAAAAAATA-----AGTATCAGGGCAGAAATCAATTATCTAGAAAGTACAAAACAAATCAATG-------AAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2163806 706 + 4234846 AAAAGTGTACTTTAAAAAGAATAAAAATGAAAGTGtattttaaaaagaataaaaataaaactgcaattgttatggattaaattgtgccctcaccccaaattatgttcttact-gttagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcata----------ctggatagagtaggctcttaacccagtttggttggtgcctttacaagaaaaggagaaaag----acacacacacagagaataccaactgatgacagaggcagaaattacaatgatgaaccaccaagctaaggaataccaacgattgctaccacca-cc-agaaactaagaaaggacaaggaaagattctgcccaatgactggaggagaacattttggtgatatttcggctctggaattttagcctccagaactgtgagagaataaattattgttgtgttaagtgacacagcatgtggtattttgttatagaagccctagaaactaatacaaaatatcaaaatgtatgggatgcctttaaaatagtacttaacgtttgatttaatgtacttaatatctatacttgaaaataaaaatgatcttgtcaatgacattaacttccaaagcaggaacaggaaaa-ggaaaaaagta-----agtatcagtgcagaaatcaattatctagaaatcacaaaacaaatcaatg-------aaac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 166309 678 - 13750039 A----------------------------AAAGTGtattttaaaaagaataaaaataaaactgcaattgttatgggttaaattgtgccctcaccccaaattatgttcttacc-attagcacatcaaaatgtgactttatttgagaataggatcattacaggtataatcacttaagttcagataatgtcata----------ctggatagagtaggctcctaacccagtttggttggtgcctttacaaggaaaggaaaaaag----acacacacacagagaataccaactgatgacagaggcagaaattacaatgatgaaccaccaagctaaggaataccaacgattgctaccacca-cc-agaaactaagaaaggacaaggaaagattgtgcccaatgactggaggagaacattttggtgatattttggctctggaattttagcctccagaactgtgagagaataaattattgttgtgttaagtgacacagtatgtggtactttgttatagaagccctagaaactaatacaaaatatcaaaatgcatgggatgcccttaaaatactacttaacatttaatttaatgtacttaatatctatacttgaaaataaaaatgatcttgtcaatgacattagcttccaaaacaggaagaggaaaa-ggaaaAAAATA-----AGTATCAGTACAGAAATCAATTATCTAGAAATCACAAAACAAATCAATG-------AAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21923161 654 + 50472720 --------------------------------------------------------AAAAG-----------tgggttgaattgtgccctcaccccaaatcatgttcttacc-cttcacacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcactgaagtcaagataaggtcatagtggatatggttgggtagcgtaggctcttaattcagtttggttggtgcctttacaagaaaaggagaaaag----acacacacagagagaataccaactgacgacagaagcagaaattagaatgttgaaccaccaagctaaggaataccaaggattgctaccacca-cc-agaaactaagaaagggcaaggaaagattctgctcagcaactgcagaaggacactttgttgatagtttgactctggacttctagcctccagaactgtgagagaataaatttctgctgtattaagccatgcagtgtgtggtactttgttacagaagctctagaaactaatacaacatatcgaaatgtattggatgcccttacaatagtacttaatggttaatttaaagcacttaatatttatatttgaaaataaaaatgatcttgtcaacgacattagcttccaaagcaggaagaggaaaa-ggaaaaaaata-------tatcagtgcagaaatcaattatctagaaattatgaaacaagccaatgaaacccaaaac i calJac3.chr21 C 0 I 1410 s saiBol1.JH378168 5026939 673 + 13128814 --------------------------------------------------------aaaagtacaattgttatggcttgaattgtgccctcaccccaaatcatgttcttaccaaaatgtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcactgaagttaagataagatcatagtgaataaagttggatagggtaggctcttaattcagtttggctggtgcctttacaagaaaaggagaaaag----acacacacagagagaataccaactgatgacagaggcagaaattagaatgttgaaccaccaagctaaggaataccaaggattgctaccacca-cc-agaaactaaaaaagggcaaggaaagattctgcccagtgactgcaggaggacattttgctgacggtttaactctggacttctagcctccagaactgtgagagaataaaattctgttgtattaagccacgcagtgtgtggtactttgttacacaagctctagaaactaatacaacatatcaaaatgtattggatgcccttaaaatagtacttaatggttaatttaaagcacttaatatttacatttgaaaataaaaatgatcttgtcaatgacattagcttccaaagcaggaagaggaaaa-gaaaaaaaaaaaaagaagtatcactacagaaatcaattatcgagacattatgaaacaaaccaatgaaacccaaaac i saiBol1.JH378168 C 0 I 519 s aotNan1.NW_018487195v1 8739806 678 + 9889416 ---------------------------------------------agaataaaaataaaagtgcaattgttacgggttgaattgtgccctcaccccaaatcatgttcttatc-cttagtacaccaaaatgtgactttatttgaaaataggatcattacaggtataatcactgaagttaagataaggtcatagtggatagggttggatagggtaggctcttaattcagtttggttggtgcctttacaagaaaaggagaaaag----acacacacacaaagaataccaactgatgacagaggcagaaattagaatgttgaaccaccaagctaaggaataccaaggattactaccaccaccc-agaaactaagaaagggcaaggaaagattctgcccagcgactgcaggaggacattttgctgacagtttgactctggacttctagcctccagaactgtaagagaataaatttctgttgtattaagccacgcagtgtgtggtactttgttacagaagctctagaaactaatacaacatatcaaaatgtattggatgcctttaaaatagtacttaatggttaatttaaagcacttaatatttatatttgaaaataaaaatgatcttgtcaatgacattagcttccaaagcaggaagaggaaaa-ggaaaaaaaaa------gtatcagtgcagaaatcaattatctagaaattatgaaacaaaccaatgaaacccaaaac i aotNan1.NW_018487195v1 C 0 I 522 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=737013.000000 s hg38.chr21_KI270874v1_alt 56862 158 + 166743 CCAAAACTcaaaacagcatggtactggtaccaaaacagatatatagaccaatggaacagaacagaggccccagaaataacaccacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatggggaaaggattccctatttaataa s panTro5.chr21 3681368 158 + 33445071 CCAAAACTcaaaacagcatggtactggtaccaaaacagatatatagaccaatggaacagaacagaggccccagaaataacaccacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatggggaaaggattccctatttaataa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17308289 158 + 46275980 CCAAAACTcaaaacagcatggtactggtaccaaaacagatatatagactaatggaacagaacagaggccccagaaataacaccacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatggggaaaggattccctatttaataa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3247309 158 - 13858734 CCAAAACTcaaaacagcatggtactggtaccaaaacagatatatagaccaatggaacagaacagaggccccagaaataacactacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatagggaaaggattccctatttaataa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4430292 158 + 32716333 ccaaaacTcaaaacagcatgatactggtgccaaaacagatatatagatcaatggaacagaacagaggcctcagaaataacaccacacatctacaaccatctgatgtttgacaaacctgataaatacaagcaatgggtaaaggattccctatttaataa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162207785 158 - 192294377 ccaaaacTcaaaacagtgtggtactggtaccaaaacagatatatggaccaatggaacagaacagaggtctcggaaataacaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcagtggggaaaggattccctatttaataa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8685005 158 + 9440265 CCAAAACTcaaaacagtgtggtactggtaccagaacagatatatggaccaatggaacagaacagaggtctcggaaataacaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcagtggggaaaggattccctatttaataa i macNem1.NW_012019910v1 C 0 I 4347 s cerAty1.NW_012002954v1 8415625 149 + 21915920 CCAAAACTcaaaacagtgtggtactggtaccaaaacagatatatggaccaatggaacagaacagagatctcagaaataacaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaaccaatggggaaaggattccct--------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14992204 158 - 90373283 CCAAAACTcaaaacagtgtggtactggtaccaaagcagatatatggaccaatggaacagaacagaggtttcggaaacaacaccacacatctacaaccatctgatctttgacaaacctgacaaaaataagcaatggggaaaggattccctatttaataa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2164512 158 + 4234846 ccaaaacTCTaaacagtgtggtactggtaccaaaacagatatatggaccaatggaacagaacagaggtctcggaaataacaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcagtggggaaaggattccctatttaataa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 166987 158 - 13750039 CCAAAACTcaaaacagtgtggtactggtaccaaaacagatatatgtaccaatagaacagaacagaggtctcagaaataacaccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcattggggaaaggattccctatttaataa i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e aotNan1.NW_018487195v1 8740484 522 + 9889416 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e saiBol1.JH378168 5027612 519 + 13128814 I e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=634123.000000 s hg38.chr21_KI270874v1_alt 57020 160 + 166743 atggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttacacaaaaattaactcaagatggattaaagacttaaatgtaagacgtaaaaccataaaaaccttagaacaaaacctaggcaataccattcaagac s panTro5.chr21 3681526 160 + 33445071 atggtgacgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttacacaaaaattaactcaagatggattaaagacttaaatgtaagacgtaaaaccataaaaaccttagaacaaaacctaggcaataccattcaagac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17308447 160 + 46275980 atggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttacacaaaaattaactcaagatggattaaagacttaaatgtaagacgtaaaaccataaaaaccttacaacaaaacctaggcaataccattcaagac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3247467 160 - 13858734 atggtgatgggaaaactggctagccatatgcataaaactgaaagtggatcccttccttaaaccttacacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaagac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4430450 159 + 32716333 atggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttacaccttatacaaaaattaactcaagatggattaaagacttaaatataagacctaaaacaat-aaaaccctagaagaaaacctaggcaatatcattcaagac i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162207943 160 - 192294377 atggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacttaggcaataccattcaagac i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8415774 160 + 21915920 atggtgatgggaaaactggctagccatatgcagaaagctgaaactggatcccttccttaaaccttaaacaaaaattaactcaagatggattaaagacttaaatgtaagacataaaaccataaaaatcctagaagaaaacttaggcaataccattcaagac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14992362 160 - 90373283 atggtgatgggaaaactggctagctatatgcagaaagctgaaactggatcccttccttaaaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacttaggcaataccattcaagac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2164670 160 + 4234846 atggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacttaggcaacaccattcaagac i manLeu1.NW_012102865v1 C 0 T 10575 s colAng1.NW_012120598v1 167145 160 - 13750039 atggtgatgggaaaactggctagccatatgcagaaaactgaaactggatcccttccttaaaccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccataaaaaccctagaagaaaacttaggcaataccattcaagac i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e aotNan1.NW_018487195v1 8740484 522 + 9889416 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e saiBol1.JH378168 5027612 519 + 13128814 I e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=357123.000000 s hg38.chr21_KI270874v1_alt 57180 115 + 166743 ataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaaaccaaaatagacaaatgggatctaattaaactgaagagcttctgcacagcaaaagaaacta s panTro5.chr21 3681686 115 + 33445071 ataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaaaccaaaatagacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaacta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17308607 115 + 46275980 ataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaaaccaaaatagacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaacta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3247627 115 - 13858734 ataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaaaccaaaatagacaaatgggacctaattaaactaaagagcttctgcacagcaaaagaaactg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4430609 115 + 32716333 ataggcatgggcaaggacttcctgtctaaaacaccaaaagcaatggcaacaaaagccaaaatagacaaatgggatctaattaaactaaagagcttttgcacagcaaaagaaacta i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162208103 115 - 192294377 aaaggcatgggcaaagacttcatgactaaaacatcaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaacta i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8415934 114 + 21915920 ataggcatgggcaaagacttcatgactaaaacgccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaact- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14992522 115 - 90373283 ataggcatgggcaaagacttcatgactaaaacaccaaaaacaatggcaaccaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaacaa i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 167305 115 - 13750039 ataggcatgggcaaagacttcatgactaaaacaccaaaaacaatggcaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaacta i colAng1.NW_012120598v1 C 0 I 13695 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e aotNan1.NW_018487195v1 8740484 522 + 9889416 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e saiBol1.JH378168 5027612 519 + 13128814 I e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e rheMac8.chr3 155378016 8829 - 185818997 I a score=2438090.000000 s hg38.chr21_KI270874v1_alt 57295 1059 + 166743 tcatcagagtgaacaggcaacctagagattgggagaaaacttttgcaatctatccacctaacaaa-ggctaatatccagaatctacaaagaacttaaacaaatttacaagaa---aaaaacaaacaacttcatcaaaaaatgggtgaaggatatgagcagacacctctcaattgaagacatttatgcagccaacaaacttacgaaaaaatgctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccgtctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagatactggagaggatgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaataagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctactgcaaggacagatgcacacgtatgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgatagactggattaagaaaatgtggcacatatacatcatggaatactatgcagtcataaaaaaggatgagttcatgtcctttgcagggacatggatgaaactgg-aaaccatcattctcagcaaagtaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgacagctgaacaatgagaacacatggacacagggaggggagcatcacacgctggggcctgtcagagggtggggggct-gggggagggatagcattaggagaaatagctaatgtaaatgacgagttgatgggtgcaagaaaccagcacggcacatgtatacctatgtaacaaacctgcatgttatgcatatgtacctcagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTTACATtctagccagactgatcag-aaaaaaaaacaatgaaagagaagacacaagttaccaacataaaaaatgagagaggt s panTro5.chr21 3681801 1059 + 33445071 tcatcagagtgaacaggcaacctagagattgggagaaaatttttgcaatctatccacctaacaaa-ggctaatatccagaatctacaaagaacttaaacaaatttacaagaa---aaaaacaaacaactccatcaaaaaatgggtgaaggatataagcagacacctctcaattgaagacatttatgcagccaacaaacttacgaaaaaatgctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccgtctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagatactggagaggatgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaacaagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctactgcaaggacagatgcacacatatgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgatagactggattaagaaaatgtggcacatatacatcatggaatactatgcagtcataaaaaaggatgagttcatgttctttgcagggacatggatgaaactgg-aaaccatcattctcagcaaagtaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgacagctgaacaatgagaacacatggacacagtgaggggaacatcacacgctggggcctgtcagagggtggggggct-gggggagggatagcattaggagaaatagctaatgtaaatgacgagttgatgggtgcaacaaaccagcacggcacatgtatacctatgtaacaaacctgcatgttatgcatatgtaccccagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTTACATtctagccagactgatcag-aaaaaaaaacaatgaaagagaagacacaagttaccaacataaaaaataagagaggt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17308722 1053 + 46275980 tcatcagagtgaacaggcaacctagagattgggagaaaatttttgcaatctatccacctaacaaa-ggctaatatccagaatctacaaagaacttaaacaaatttacaagaa---aaaaacaaacaactccatcaaaaaatgggtgaaggatatgagcagacacctctcaattgaagacatttatgcagccaacaaacttacgaaaaaatgctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagataccgtctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacaaatactggagaggatgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaataagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctactgcaaggacagatgcacacgtatgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgatagactagattaagaaaatgtggcacatatacatcatggaatactatgcagtcataaaaaaggatgagttaatgtcctttgcagggacatggatgaaactgg-aaaccatcattctcagcaaagtaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgacagctgaacaatgagaacacatggacacagggaggggaacatcacacgctggggcctgtcagagggtggggggct-gggggagggatagcattaggagaaatagctaatgtaaatgacgagttgatgggtgcaacaaaccagcacggcacatgtatacctatgtaacaaacctgcatgttatgcatatgtaccccagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTTACATtctagccagactgatcag--aaaaaaaacaatga-----aagacacaagttaccaacataaaaaatgagagaggt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3247742 1055 - 13858734 tcatcagagtgaacaggcaacctagagattgggagaaaaattttgcaacctatccacctaacaaa-ggctaatatccagaatctaaaaataacttaaacaaatttacaagaa---aaaaacaaacaactccatc-aaaaatgggtgaaggatatgagcggacacctctcaattgaagacatttatgcagccaacaaacttatgaaaaactgctcatcatcactggtcattagagaaatgcaaatcaaaaccacaatgagacacggtctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatactggagaggatgtggagaaataggaatgcttttatactgttggtaggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaagaagaaataccatttgacccagcaatcccattactgggtatatacccaaagcattataaatcattctactacaaggacagatgcacacctatgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagtcataaaaaa-gatgagttcatgtcttttgcagggacatggatgaaactggaaaaccatcattctaagcaaagtaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgacagctgaacaatgagaacacatgaacacagggaggggaacatcacacactggggcctgtgagagggt-cagggct-ggggaagggatagcattaggagaaatacctaatgtaaatgacgagttgatgggtgcaacaaaccagcacggcacatgtatacctatgtaacaaacttgcatgttatgcacatgtaccccagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTTACATtctagccagactgatcag--aaaaaaatcaatgaaagagaagacacaagttatcaatat-caaaatgagagaggt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4430724 1067 + 32716333 tcatcagagtgaacaggcaacctagagattgggagaaaatttttgcaatctatccacctaacaaagggctaatatccagaatctacaaagaacttaaacaaatttacaagaa---aa----aaacaactccatcaaaaaatgggtgaagggtatgaacagacacctctcaaatgaagacatttatgcagccaacaaacttacgaaaaaatgctcatcgtcactggtcattagagaaatgcaaatcaaaaccacaatgagataccgtcttacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatactggagagcatgtggagaaataggaatgcttttacactgttggtaggagtgtaaattagttcaaccattgtggaagacagtgtggtgactcctcaaggacctagaaccagaaataccatttgacccagcaatctcattactgggtatatacccaaaggattataaatccttctactacaaagacagatgcacacatatgactactgcagcactgccttggaaccaaccaatagcaaagtcttggaaccaacccaaatgcccatcaatgatagactcaattaagaaaatgtggtacatatacaccatggaatactatgcagtcataaaaaaggatgagttcatgtcctttgcagggacatggatgaaactgg-aaaccatcattctcagcaaagtaacacgggaacagaaaaccaaacactgcatgttctcactcataagtgagaaccgaacaataagaacacatggacacactgaagggaacatcacacactggggcctgtcagagggtgggggcctggggggagggatagcatcaggagaaatacctaatgtaaatgatgagttgatggatgcaacaaaccagcacagcacatgtatacctatgtaacaaacctgcatgttacacacatgtaccccagaatttaaagtataatttaa------aaaagaaGAGGAAAGAAAATTGTCATtctagccacactgatcagaaaaaaaaaacaatgaaagagaagacacaagttaccaatatcaaaaatgagagaggt i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162208218 1058 - 192294377 ccatcagagtgaacaggcaacctacagaatgggagaaaatttttgcaacctactcatctgacaaagggctaatatccagaacctacaaagaactcaaacaaatttacaagaa---aaaaacaaacaaccccatcaaaaagtgggcaaaggacatgaacagacatttctcaaaagaagacattcatacagccaacagacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaccatgagataccatctcacaccagtt----tggtgatcattaaaatgtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttacactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaaccagaaatactatctgaccaagcaatcccattactgggaatatacccaaaggaatataaatcattgtactacaaagacagatg--cacttatgattattgcagcactgttc---------acaatagcaaagtcctggaaccaacccaaatgcccatcaatgataagctggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaagatgagttcatgtactttgcagggacatggatgaagctgg-aaatcatcattctcagcaaagtaacacgggaacagaaaaccaaacaccacatgttctcactcataagtgagagttgaacaatgagaacacatggacacagggaggggaacatcacacactggggcctgtcagagggtagggggct-ggagaagggatagcattaggaaaaatacctaatgtaaatgacaagttgatgggtgcaacaaaccaacatggcacatgtatacctatgtaacaaactggcatgttgtgcacatgtaccccagaatttaaagtataatttaaaaaaagaaAAGgaaaggaaagaaaactgacattctagccagactggtcag---aaaaaaacaatgaaagagaagacacaagttaccaatatcaaacatgagagaggt i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8416048 1058 + 21915920 -catcagagtgaacaggcaacctacagaatgggagaaaatttttgcaatctatccatctaacaaaggactaatatccagaatctacaaagaacttaaacaagtttacaagaaaagaaaaaaaaaaaactccatcaaaaaatggatgaaggatgtgaacagacacttctcaaatgaagacctttatgcagccaacaaacttatgaaaaaatgctcatcatcactggttattagagaaatgcaaatcaaaaccatgatgagatagcatctcacaccagttagaatggcgatcattaaaatgtcagga---aacagatgctggagaggatgtggagaaataggaaagcttttacactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctacaaccagaaataccatttgacccagcaatcccattactgggaatatacccaaaggattataaatcattgtactacaaagacagatg--cacttatgattattgcagcactgttc---------acagtagcaaagtcttggaatcaacccaaatgcccatcaatgataagctggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtactttgcagggacatggatgaagctgg-aaatcatcattctcagcaaagtaacacaggaacagaaaaccaaacaccgcatgttctcactcataagtgagagctgaacaatgagaacacatggacacagggaggggaacatcacacactggggcctgtcagagggtggggggct-ggggaagggatagcattaggagaaatacctaatgtaaatgacgagttgatgggtgcaacaaaccaatgtggcacatgtatacctatgtaacaaactggcatgttgtgcacatgtaccccagaatttaaagtataatt--aaaaaaaaaaAGgaaaggaaagaaaatcgacattctagccagactggtcag----aaaaaacaatgaaagagaagacacaagttaccaatatcaaaaatgagagaggt i cerAty1.NW_012002954v1 C 0 I 5656 s chlSab2.chr2 14992637 1041 - 90373283 tcatcagagtgaacaggcaacctacagattgggagaaaatttttgcaatctgtccatctaacaaaggactaatatccagaatctacaaagaacttaaacaaatttacaagaa---aa-----------------aaaaaatgggtgaaggatgtgaacagacacttctcaaatgaagacatttatgcagccaacaaacttacaaaaaaatgctcatcatca---gccattagagaaatgcaaatcaaaactacgatgagataccatctcacaccagttagaatggcgatcattaaaatgtcaggaaacaacagatgctggagaggatgtggagaaataggaatgcttttacactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggacctagaaccagaaataccatttgacccagcaatcccattactgggaatatacccaaaggattataaatcattgtactacaaagacagatg--caattatgattattgcagcactgttc---------acaatagcaaagtcttggaaccaacccaaatgcccatcaatgataagctggattaagaaaatgtggcacatatacaccatggaatgctatgcagccataaaaaaggatgagttcatgtactttgcagggacatggatgaagctgg-aaatcatcattctcagcaaagtaacacaggaacagaaaaccaaacactgcatattctcattcataagtgagagctgaacaatgagaacacatggacatagggaggggaacatcatacactggggcctgtcagagggtggggggct-ggggaagggatagcattaggagaaatatctaatgtaaatgacgaattggtaggtgcaacaaaccaacatggcacatgtatacctatgtaacaaactggcatgttgtgcacatgtaccccagaatttaaagtataatttaaaaaaagaaAAGgaaaggaaagaaaatcgacattctagccagactgctcag----aaaaaacaatgaaagagaagacacaagttaccaatatcaaaaatgagagaggt i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e aotNan1.NW_018487195v1 8740484 522 + 9889416 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e saiBol1.JH378168 5027612 519 + 13128814 I e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e rheMac8.chr3 155378016 8829 - 185818997 I a score=167245.000000 s hg38.chr21_KI270874v1_alt 58354 94 + 166743 agcaccactataaattctatgaatatttaaagaataataagaaaacattgtgaacatatttgtggcaacaaattgaccaatttagatgaaatga s panTro5.chr21 3682860 94 + 33445071 agcaccactataaattctatgaatatttaaagaataataagaaaacattgtgaacatatttgtggcaacaaattgaccaatttagatgaaatga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17309775 94 + 46275980 agcaccactataaattctatgaatatttaaagaataataagagaacattgtgaacatatttgtggcaacaaattgaccaatttagatgaaatga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3248797 94 - 13858734 agcaccactacaaattccatgaatatttaaagaataataagaaaacattgtgaacatatttgtggcaacaaattgaccaatttagatgaaatga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4431791 93 + 32716333 agcatcactataaattcgatgaatatttaaagaat-ataagaaaacattgtcaacatatttatggcaacaaattgaccaatttagatgaaatga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162209276 94 - 192294377 aacatcactataaattctatgaatatttaaagaataataataaaacattgtgaacatatttatggcaacaaattgaccaatttagatgaaatga i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14993678 94 - 90373283 aacatcactataaattctatgaatatttaaagaataataataaaaaattgcgaacatatttgtggcaacaaattgaccaacttagatgaaatga i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e aotNan1.NW_018487195v1 8740484 522 + 9889416 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e saiBol1.JH378168 5027612 519 + 13128814 I e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e cerAty1.NW_012002954v1 8417106 5656 + 21915920 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e rheMac8.chr3 155378016 8829 - 185818997 I a score=2548.000000 s hg38.chr21_KI270874v1_alt 58448 1 + 166743 a s panTro5.chr21 3682954 1 + 33445071 a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17309869 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3248891 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4431884 1 + 32716333 a i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162209370 1 - 192294377 a i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14993772 1 - 90373283 a i chlSab2.chr2 C 0 C 0 s aotNan1.NW_018487195v1 8741006 1 + 9889416 a i aotNan1.NW_018487195v1 I 522 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e saiBol1.JH378168 5027612 519 + 13128814 I e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e cerAty1.NW_012002954v1 8417106 5656 + 21915920 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e rheMac8.chr3 155378016 8829 - 185818997 I a score=2211261.000000 s hg38.chr21_KI270874v1_alt 58449 778 + 166743 agattcaatattattgagatgtgtattctccccagtttatagattcaacacaatcccaatcaaaatcctagcaaggctgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctaaaatactcaaaacaaccttgaataaaaagccaaaataggagaattgacactacacatgatatgaagattcatgataaagccatagtaatcaagatgatgctattggcatcacacaagataaacatgtagatcaatgaaac-aaaaagtgctcagaaataagttcacacgtgtatggacaatgactttcaacaaagatgcaaaggcacaattaattggaaaaggacagtcttttcaaaaagagtactggaaaaatttaatttccatatggaataaacaaactttgatccatatctcacactgtata-aaaaattaattcaaaatagattatgcatttaaatgtaaaatctataagaagtataaaaacttctagaatacagcataggagaaaatttaggtga--ctgagttaaacaaggttttattacttactatacaaaaagaacaatttataaaagaacatgtgttagtccatt-ttcatgctgctgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggactcacagttccacatggctggggaggcttcaaaatcatggtggaaggcaaggaggagcaaattatgtcttatgtggatggcggcaggcatagagagcgagcttgttcagggga s panTro5.chr21 3682955 778 + 33445071 agattcaatattattgagatgtgtattctccccagtttatagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctataatactcaaaacaaccttaaataaaaagccaaaataggagaattgacactacacatgatatgaagattcatgataaagctatagtaatcaagatgatgctattggcatcacacaagataaacatgtagatcaatgaaac-aaaaagtgctcagaaataagttcacacgtgtatggacaatgactttcaacaaagatgcaaaggcacaattaattggaaaaggacagtcttttcaaaaagaatactggaaaaatttaatttccatatggaataaacaaactttgatccatatctcacactgtata-aaaaattaattcaaaatagattatacatttaaatgtaaaatctataagaagtataaaaacttctagaatacagcataggagaaaatttaggtga--ctgagttaaacaaggttttattacttactatacaaaaagaacaatttataaaagaacatgtgttagtccatt-ttcatgctgctgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggactcacagttccacatggctggggaggcttcaaaatcatggtggaaggcaaggaggagcaaattatgtcttatgtggatggcggcaggcatagagagcgagcttgttcagggga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17309870 777 + 46275980 agattcaatattattgagatgtgtattctccccagtttatagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctataatactcaaaacaaccttgaataaaaagccaaaataggagaattgacactacacatgatatgaagattcatgataaagctatagtaatcaagatgatgctattggcatcacacaagataaacatgtagatcaatgaaac-aaaaagtgctcagaaataagttcacacgtgtatggacaatgactttcaacaaagatgcaaaggcacaattaattggaaaaggacagtcttttcaaaaagagtactggaaaaatttaatttccatatggaataaacaaactttgatccatatctcacactgtata-aaaaa-aaattcaaaatagattatacatttaaatgtaaaatctataagaagtataaaaacttctagaatacagcataggagaaaatttaggtga--ctgagttaaacaaggttttattacttactatacaaaaagaacaatttataaaagaacatgtgttagtccatt-ttcatgctgctgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggactcacagttccacatggctggggaggcttcaaaatcatggtggaaggcaaggaggagcaaattatgtcttatgtggatggcggcaggcatagagagcgagcttgttcagggga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3248892 778 - 13858734 agattcaatattattgagatgtgtattctccccagtttatagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaactgcaaataatctaaaatactcaaaacaaccttgaataaaaagccacaataggagaattgacactacacatgatatgaagattcatgataaagctatagtaatcaagatgatgctattggcatcacacaagatagacatgtagatcaatgaaacaaaaaagtgctcagaaataagttcacacatgtatggacaatgactttcaacaaagatgcaaaggcagaattaattggaaaaggacagtcttttcaaaaagggtactggaaaaatttaatttccatatggaataaacaaactttgatccatatctcacactttata-aaaaattaattcaaaatagattatacatttaaatgtaaaacctataagaagtataaaaacttctagaatacagcatagcagaaaatttaggtga--ctgagttaaacaaggttttattacttaccatacaaaaagaacagtttataaaagaacatgtgttagtccatt-ttcatgctgctgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggactcacagttccacatggctggggaggcttcaaaatcatggtggaaggcgaggaggagcaaattacgtcttatgtggatggcggca-gcatagagagcgagcttgttcagggga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4431885 773 + 32716333 agattcaatactgttgagatgtgtattctccccagtttacagattcaacacaatcccagtcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaattcatatggaaatgcaaataatc------actcaaaacaaccttgaataaaaagccaaagtaggagaactgatactatacatcatatgaagactcatgagaaagctatagtaatcaagatgacgctattggcatcatacaagatagacatggagatcaatgaaac-aaaaagcgctcagaaataagttcacacatgtatggacaatgagtttcaacaaagacccaaaggcagaattcattggaaaaggacagtcttttcaaaaagagtactggaaaaatttaatttccatatggaataaacaaactttgatccatatctcacactgtata-aaaaattaattcaaaatggattatacatttaaatgtaaaatctataagaagtaaaaaaacttctagaatacatcataggagaaaatttaggtga--ctgagttaaacaaggttttattatttactatacaaaaagaacaacttataaaagaacatgtgttagtccattctccatgctgctaataaagacatacctaagactgggcgatttataaaagaaagaggtttaattggactcacagttccacatggctggggaggcttcaaaatcatggtggaaggcaaggaggagcaaattacatcttatgtggatggcggcaggcatagagagcgagcttgttcagggga i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162209371 774 - 192294377 agattcaatattattgagatgaggtttcttcccagtttacagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctaaaatactcaaaacaaccttgaataaaaagccaaagtaggagga-taacactacatgtgatatgaagactcatgataaagctatagcaatcaagatgatgctattggcatcacacaagatagacatgtagatcaatgaaac-aaaaagagctcaggaataagttcccacatgtatggacaatgagtttcaacaaagatgcaaaggcagaattgattggaaaaggacagtcttttcaaaaagggtactggaaaaattgaatttccatatggaataaacaaactttgatctatatctcacactgtata-aaaaactaattcaaaatggattatacatttaaatgtaaaatctat---aagtataaaaacttctagaatacagcataggagaaaatttaggtga--ctgagttaaaccaggttttattatttactatacaaaaagaacaacttataaaagaacatgtgttagtccatt-ttcatgctactgataaagacatacccaagactgggcaacttacaaaagaaagaggtttaattggactcacagttccagatggctggggaggcttcacaatcatgatggaaggcaagaaggagcaaattaaattttatgtggatggcagcaggcaaagacagcgagcttgttcagggga i macFas5.chr3 C 0 C 0 s chlSab2.chr2 14993773 774 - 90373283 agattcaatattattgagatgtgttttcttcccagtttacagattcaacacaatcccaatcaaaatcctagcaaggttgtagaaacttacaagctgattctaaaatttatatggaaatgcaaataatctaaaatactcaaaacaaccttgaataaaaagccaaagtgggaggattaacactacacgtgatatggagactcatgataaagctatagcaatcaagatgatgctatgggcatcacacaagatagacatgtagatcaatgaaac-aaaaagagttcaggaataagttcccacatgtatggacaacgaatttcaacaaagatgcaaaggcagaattgattggaaaacgacagtc-tttcaaaaagggtaccgggaaaatttaatttccgtatggaataaacaaactttgatccatatctcacacagtata-caaaactaattcaaaatggattatacatttaaatgtaaaatctgt---aagtataaaaacttctagaatacagcataggagaaaatttaggtga--ctgagttaaaccaggttttattatttactgtacaaaaagaacaacttataaaagaacatgtgttagtccatt-ttcatgctactgataaagacatacccaagaatgggcaatttacaaaagaaagaggtttaattggactcacagttccagatggctggggaggcttcacaatcatgatggaaggcaagaaggagcaaatgaaattttatgtggatggcagcaggcaaagacagcaagcttgttcagggga i chlSab2.chr2 C 0 C 0 s saiBol1.JH378168 5028131 744 + 13128814 agattcaatattattgagatgtgtattctctctggtttatattttcaacacagtcccaatcaaaatcctagcaaagttttagaaacatacaagctgattctaaaatttacatggaaatgctaataatctaaaatagtcaaaacgaccttgaataaaaagccaaagtaggag----------------gatacaaagactcgtg--------atagtaatcaagatgacaccattggcac----caggatagacatatatatcaatgaaac-aaaaagagctcaggaacaagctcatacatatatggacaatgagtttcaacaaagatgtaaaggcagaattgattggaaaaggacaatcttttcaaaaatggtactggaaaaatttaatttccatatgggataaacaaactttgatcccta----acactgtacacaaaaattaattcaaaatgatttatacatttaaatttaaaatctgt---aagtataaaaactcctagaatacaacataggagaaaatttaggtgactctcagttatataaagttttcttgtttactgtacaaaatgaataatttataaaagaacatgtattagtccatt-ttcatgctgctgataaagacatacctgagactgggtaatttacaaaagaaagaggattaactggact--ctgttccacatggcttgggaggcttcataatcatggtggaaggcaaggagaagcaaattacgtcttatgtgggtggcagaaggtaaagagtgtgagtttgctcagggga i saiBol1.JH378168 I 519 C 0 s aotNan1.NW_018487195v1 8741007 764 + 9889416 agattcagtattattgagatgtgtattctccccagtttacattttcaacacaatcccagtcaaaatcctagcaaggctgtagaaacataaaagctgattctaaaatttatatggaaatgcaaatattctaaaatagtcaaaacaaccttgaataaaaagccaaagtaggaggattgacactacacatgatacaaagactcgtg--------atagtaatcaagatgatactattggcac----caagatagacatatagatcaatgaaac-aaaaagagctcaggaataagctcacacatgtatggacaatgagtttcaacaaagatgcaaaggcagaattgattggaaaaggacaatcttttcaaaaatggtactggaaaaatttaatttccatatggaataaacaaactttgatccttatctcacactgtatacaaaaattaattcaaaatggtttacacatttaaatttgaaacctac---aagtataaaaacttctagaatacagcataggagaaaatttaggtgactctgagttaaataaagttttcttatttactatataaaatgagtaatttataaaagaacatgtattagtccatt-ttcatgttgctgataaagacatacccaagactgggtaatttacaaaagaaagaggtttatctggact--ctgctccacatggcttgggaggcttcacaatcatggtggaaggcaaggaggagcaaattacatcttacatgggtggcagaaggtaaagagagtgagtttgttcagggga i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e calJac3.chr21 21923815 1410 + 50472720 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e cerAty1.NW_012002954v1 8417106 5656 + 21915920 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e rheMac8.chr3 155378016 8829 - 185818997 I a score=2383750.000000 s hg38.chr21_KI270874v1_alt 59227 703 + 166743 actcccattttt-aaaaaacatcagatctca-gagactcactcaccatcacaggaacaacacaggaaagagccgcccccatgattc-----aaccacctcccgccagtttcctcccatggcatgtgagaattgtggaagttacaattcaagatgagatctgggtggggacacagccaaactatatcataacacatttataatttttacttcatcaaaacttaaaacttctgcacttcaaaaggctttttaaaaattttttgagacgg-------------------gactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaccttagcttcccaagtagctgggactacaggtgtgtaccactacatccagccaact------------------------------------------------------tttt----cttttttttggtaaagatgaggtctcactatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcagccttgcaaagtgctgggattacaagcatgtgccactgtgcctggccaaaagactattaaagattaaaaatactattaaaataattttaaaaagcag-cttaactaatgaaataaaatatttacaaatcatgtatctgataggggaattttactcagaat-------atataaataactctaaatctcaataattaaaaaa-cataatccactaaaa--atatgggcaaaatattttagtaaacatttaact s panTro5.chr21 3683733 703 + 33445071 actcccattttt-aaaaaacatcagatctca-gagactcactcaccatcacaggaacagcacaggaaagacccgcccccatgattc-----aaccacctcccgccagtttcctcccatggcatgtgagaattgtggaagttacaattcaagatgagatctgggtggggacacagccaaactatatcataacacatttataatttttactttatcaaaacttaaaacttctgcacttcaaaagactttttaaaaattttttgagacag-------------------gactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaccttagcttcccaagtagctgggactacaggtgtgtaccactacatccagccaact------------------------------------------------------tttt----cttttttttggtaaagatgaggtctcactatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcacccttgcaaagtgctgggattacaagcatgtgccactgtgcccggccaaaagactattaaagattaaaaatactattaaaataattttaaaaagcag-cttaactaatgaaataaaatatttacaaatcatgtatctgataggggaattttactcagaat-------atataaataactctaaatctcaataattaaaaaa-cataatccactaaaa--atatgggcaaaatattttagtaaacatttaact i panTro5.chr21 C 0 C 0 s panPan2.chr21 17310647 703 + 46275980 actcccattttt-aaaaaacatcagatctca-gagactcactcaccatcacaggaacagcacaggaaagacctgcccccatgattc-----aaccacctcccgccagtttcctcccatggcatgtgagaattgtggaagttacaattcaagatgagatctgggtggggacacagccaaactatatcataacacatttataatttttactttatcaaaacttaaaacttctgcacttcaaaagactttttaaaaattttttgagacag-------------------gactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaccttagcttcccaagtagctgggactacaggtgtgtaccactacatccagccaact------------------------------------------------------tttt----cttttttttggtaaagatgaggtctcactatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcagccttgcaaagtgctgggattacaagcatgtgccactgtgcccggccaaaagactattaaagattaaaaatactattaaaataattttaaaaagcag-cttaactaatgaaataaaatatttacaaatcatgtatctgataggggaattttactcagaat-------atataaataactctaaatctcaataattaaaaaa-cataatccactaaaa--atatgggcaaaatattttagtaaacatttaact i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3249670 701 - 13858734 actcccatttttaaaaaaacatcagatctca-gagactcactcaccatcacaggaacagcacaggaaagacccgcccccatgattc-----aaccacctcccaccagtttcctcccatggcatgtgggaattgtggaagttacaattcaagatgagatttgggt-gggacacagccaaactatatcataacaca-ttataatttttactttatcaaaacttaaaacttctgcacttcaaaagacttttttaaaa-tttttgagacag-------------------gactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaccttagcttcccaagtagctgggactacaggtgtgtaccactacatccagccaact------------------------------------------------------tttt----cttttttttggtaaagatgaggtctcactatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcagccttgcaaagtgctgggattacaagcatgtgccactgtgcccggccaaaagattattaaagattaaaaatactattaaaataattttaaaaagcat-cttacctaatgaaataaaatatttacaaatcatgtatctgataggggaattttactcagaat-------atataaataactctaaatctcaataattaaaaaa-cataatccactaaaa--atatggacaaaatattttagtaaacatttaact i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4432658 766 + 32716333 actcccattttt-aaaaaacatcagatctca-gaggctcactcaccatcacaggaacagcacaggaaagacccgcccccatgattc-----aaccacctcccaccagtttcctcccatggcatgtgggaagtgtggaagttacaattcaagatgagatttgggtgaggacacagccaaacaatatcatgacacatttataatttctcctttatcaaaacttaaaacttctgcacttcaaaatacttttttaaaattttttgagacaggatctcactctgtcacccagactgaagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaccttagcttcccaagtagctgggactatgggtgtgtaccactacatccagccaactttgggttttttttgtttcgtttttgttttgtttttttgttgttgttgctgtttgtttt----ttttttttttgtaaagatgaggtctccctatattgcccaggctgatccccaactcctggactcaagcagtcctccacctcagccttgtaaagtgctggg---------atgtg-cactgtgcccggccaaaagattattaaagattaaaaatactattaaaat-attttaaaaagcag-cttacctaatgaaataaaatatttacaaatcatgtatctgataggggaattttgctcagaat-------atataaataactctaaatctcaataattaaaaaagcataatccactaaaa--atatgggcaaaatattttagtaaacatttaact i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162210145 743 - 192294377 attcccattttt-taaaaccatcagatctcaagagacccactcaacatcacaggaacagcacaggaaagacctgcccccatgattc-----aaccacctcccaccaggttcctcccatggcatgtgggaacagtgggagctacaattcaagatgagatttgggtggggacacagccaaacagtatcagaacacatttataatttttactttatcaaaacttaaaacttatgcacttcaaaagacttttttttaattttgtaagacaggatctcactctgtcacccagactggagtgcagtggcacaatctcagctcactgcagcctccatcttctacaatcctcccaacttagcttcctaagtagctgggactacaggcgtgtaccaccacatccagccaac----------------------------ctttttttttttt--------------tttt----tttttttttggtaaatacaaggtctcactatattacctaggctgatccccagctcctggactcaagcagtcctccatttcagccttgcaaagtgctgggattacaagcatgtgccactgtgcctggccaaaagattattaaagattaaaaacactgttaaaataattttaaaaagcag-cttacctaatgaaataaaatagttgcaaataatgtatctgataggggaattttactcagaatatataatatataaataactctaaatttcaataattaaaagaacataatccactaaaa--atatgggcaaaatattttagtaaacatttAACt i macFas5.chr3 C 0 I 2064 s chlSab2.chr2 14994547 747 - 90373283 attcccattttt-taaaaccatcagatctcatgagactcactcaacatcacaggaacagcacaggaaagacctg------tgattc-----aaccacctcccaccaggttcctcccatggcatgtgggaacagtgggagctacaattcaagatgagatttgggtagggacacagccaaacagtatcagaacacatttatgatttttactttatcaaaacttaaaacttatgcacttcaaaagacttttttttaattttgtaagataggatctcactctgtcacccagactggagtgcaatggcacaatctcagctcactgcagcctccatcttctacaatcctcccaacttagcttcctaagtagctgggactacaggcgtgtaccactacatccagccaact-------------------ttttttttttttttttttttt--------------tttt----tttttttttggtaaatacaaggtctcactatattacctaggctgatccccagctcctggactcaagcagtcctccatttcagccttgcaaagtgctgggattacaagcatgtgccactgtgcctggccaaaagattattaaagattaaaaacattgttaaaataattttaaaaagcagccttacctaatgaaataaaatagttacaaataatgtatctgataggggaattttactcagaatatataacatataaataactctaaatttcaataattaaaaaaacataatccactaaaa--gtatgggcaaaatattttagtaaacatttAACt i chlSab2.chr2 C 0 I 2085 s calJac3.chr21 21925225 727 + 50472720 acccacattT-----aaaccatcagatcttatgagactcacagactatcatgggaatagcacaggaaagacc-----ccatgattcctggtaggcacctcctaccaggttcctcctatgacatctgggaattgtgggagttacaattcaagatgagttttggctggggacacagtcaaacaatattaGGACACATTTATAAGTTTTACTTTATCAAAATTTAAAACTTCTGCACTTCAGAATAATTTTT---AAGtttttgagacagggtctcactccatcacctagactggagtgtggcagcacagttacagctgactgcagcctccagcttctacaatcctcctaccttagcttcccaagtagctgggactacaggtatgtaccaccatgtccagccaact-----------------------------------ttttt--------------tttt-ttttttttttttggtaaagacaaggtctcagtatattgtgcaggctgctccccaactcctggactcaagcagtcttccacctcgaccttgcaaggtgttgggattacaggcatgagccactatgcctggccAAAAGattatttaaaaataaaaatgctattaaaataatttttaaaagcag-ctgacctaatgaaataaaatatttacaaatcatgtatctgatagagggatgttactcaaaat-------atataaataactctaaatctcaataattaaaaatacagaatcccctaaaaagatatgggcaaaatattttggtaaacatttaact i calJac3.chr21 I 1410 C 0 s saiBol1.JH378168 5028875 726 + 13128814 actcccaatttttaaaaaccgtcagctcttatgagactcacggactatcacgggaatagcacaggaaagacc-----ccatgattc-----aaccacctcctaccaggttcctcctacaacatctgggaattgtggaaattacaattcaagatgagttttgggtggggacacagtcaaacaatatcaggagacatttataatttttactttatcaaaatttaaaacttctgcacttcagaataactttt---aattttttgagacagggtctcgctctatcacctagactggagtgtggcagcacaatcaaagctcaccacagcatccatcttctacagtcttcctaccttagcttcccaagtaactgggactacaggcgtgtaccaccatgtccagccaact-----------------------------------ttttt--------------ttttaacttttttttttggtaaagacaaggtctcagtatattgtggaggctggtccccaactcctggactcaagcagtcttccacctcgaccttgcaaggtgctgcgattacaggtatgagccactgtgcctggacaaaagattatttaaaaataaaaatactattaaaataatttttaaaagcag-ctgacctaatgaaataaaaaatttacaaatcatgtatctgatagaggaatgttactcaaaaa-------atataaataa--ctaaatctcaataattaaaaaaacagaatcccctaaaaagatatgggcaaaatattttggtaaacatttaact i saiBol1.JH378168 C 0 C 0 s aotNan1.NW_018487195v1 8741771 729 + 9889416 actcccaatttttaaaaaccatcagatcttatgagactcacggactgtcatgggaatagcacaggaaagacc-----ccatgattcctggtaggaacctcctaccagtttcctcctatgacatctgggaattgtgggagttacaattcaagatgagttttgggtggagacacagtcaaacaatatcaggacacatttagaatttttactttatcaaaatttaaaacttctccacttcagaataattttt---aattttttgagacagggtttcactctgtcacctagactggagtgtggcagcacaatcacagctgactgcagcctccatcttctacaatcctcctaccttagcttcccaagtagctgggactacaggcgtgtaccatcatgtccagccaact-----------------------------------ttttt--------------tttt----tttttttttggtaaagacaaggtctcagtatattgtgcaggctggtccccaactcctggactcaagcagtcttccacctcgaccttgcaaggtgctgggattacaggcatgagccactgtgcctggccaaaagattatttaaaaataaaaatgctattaaaataatttttaaaagcag-ctgacctaatgtaataaaatatttacaaatcatgtatctgatagaggaatgttactcaaaat-------acataaataactctaaatctcagtaattaaaaaaacagaatcccctaaaaagatatgggcaaaatattttggtaaacatttaact i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e cerAty1.NW_012002954v1 8417106 5656 + 21915920 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e rheMac8.chr3 155378016 8829 - 185818997 I a score=1342340.000000 s hg38.chr21_KI270874v1_alt 59930 604 + 166743 aaagaaaatatacatgac----aagagaatttttaaaaatcctcaataacattagtcactaagataatgcaattt-aaaatcacaatgagattacaaatacaaacctattaaaatggccaaaatttgaacccctgaacataccaagtgttggaaaggatgtgaaggaattgaaactcttgtttgcagctggtgagactgcaaaatggtgggatgactctgtagagcattttggcag-tttcttaaatagttaaaaatacacccaccatatgatccagctattctacgtctagatagttacccaagagaaattttaaaatattttcatacaaagatacatatgaatgtttacagcagctttacttgtaatagccaaaattgagaagcaaccaaaa---tatctactatcagttaagtggataaacaaactctgggatatctaactttaaaaatacaaaacaataaaaaggaatgttctattgatacatattacatgaacgaatctcaaaatatgctgagtaaaatcagccagatttttgtaaagtacatgctacataattctagtcacataaattctaggcagt----------gcaaagcaaatagcaacaaaa---agaacagta s panTro5.chr21 3684436 611 + 33445071 aaagaaaatatacatgacaagtaagagaatttttaaaaatcctcaataacattagtcactaagataatgcaattt-aaaatcacaatgagattacaaatacaaacctattaaaatggccaaaatttgaacccctgaacataccaagtgttggaaaggatgtgaaggaattgaaactcttgtttgcagctggtgagactgcaaaatggtgggatgactctgtagagcattttggcag-tttcttaaatagttaaaaatacacccaccatatgatccagctattctacgtctagatagttacccaagagaaattttaaaatattttcatacaaagatacatatgaatgtttacagcagctttacttgtaatagccaaaatcgagaagcaaccaaaaactgatctactatcagttaagtggataaacaaactctgggatatctaactttaaaaatacaaaacaataaaaaggaatgttctattgatacatactacatgaacgaatctcaaaatatgctgagtaaaatcagccagatttttgtaaagtacatgctacataattctagtcacataaattctaggcagt----------gcaaagcaaatagcaacaaaa---agaacagta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17311350 608 + 46275980 aaagaaaatatacatgacaagtaagagaatttttaaaaatcctcaataacattagtcactaagataatgcaattt-aaaatcacaatgagattacaaatacaaacctattaaaatggccaaaatttgaacccctgaacataccaagtgttggaaaggatgtgaaggaattgaaactcttgtttgcagctggtgagactgcaaaatggtgggatgactctgtagagcattttggcag-tttcttaaatagttaaaaatacacccaccatatgatccagctattctacgtctagatagttacccaagagaaattttaaaatattttcatacaaagatacatatgaatgtttacagcagctttacttgtaatagccaaaattgagaagcaaccaaaa---tatctactatcagttaagtggataaacaaactctgggatatctaactttaaaaatacaaaacaataaaaaggaatgttctattgatacatactacatgaatgaatctcaaaatatgctgagtaaaatcagccagatttttgtaaagtacatgctacataattctagtcacataaattctaggcagt----------gcaaagcaaatagcaacaaaa---agaacagta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3250371 608 - 13858734 aaagaaaatatacatggcaaataagagaatttttaaaaatcctcaataacattagtcactaagataatgcaattt-aaaatcacaatgagattacaaatacaatcctattaaaatggccaaaatttgaacccctgaacataccaagtgttggaaaggatgtgaaggaattgaaactcttgtttgcagctggtgagactgcaaaatggtgggatgactctgtagagcattttggcag-tttcttaaatagttaaaaatacacccaccatatgatccagctattctatgtctagatagttatgcaagagaaattttaaaatattttcatacaaagatacatatgaatgtttacagcagctttacttgtaatagccaaaatcgagaagcaaccaaaa---tatctactatcagttaagtggataaacaaactctgggatatctaactttaaaaatacaaaacaataaaaaggaatgttctattgatacatattacatgaatgaatctcaaaatatgctgagtaaaatcagccagatttttgtaaagtacatgctacataattctagtcacataaattctaggcagt----------gcaaagcaaatagcaacaaaa---agaacagta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4433424 610 + 32716333 aaagaaaatatgcatggcaaataagagaattttttaaaatcctcaataacattagtcactaagataatgcaactt-aaaatcacaatgaga-tgcaaatacaaacctattaaaatggccaaaatttgaacccctgaacataccaagtgttggaaaggatgttaaggaattgaaactcttgtttgcagctggtgagactgcaaaatgctgggatgactctgtagagcattttggcag-tttcttaaatagttaaaaatacacccaccatatgatccagctattctacttctagatagttatccaagagaaattttaaaatattttcatacaaagacacatatgaatgtttacagcagctttacttgtaatagccaaaattgagaagcaaccaaaa---tatctactatcagttaaatggataaacaaactctgggatatctaaatttaaaaatacaaaacaataaaaaggaatgttctattgatacatattacatgaacgaacctcaaaatacgctgagtaaaatcagccagatttttttaaactacatgctacataattctagtcacataaattctaggcagt----------gcaaagcaaatagtaacaaaaagcagaacagta i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21925952 607 + 50472720 aaagaaaatacacgtggcaaataagagcattaaaagaaatcctcaataacattagtcactaagataacacaatttaaaaatcacaatgaga-tgcaaatacaaacctactagaatggccaaaatttgaaaccctgaacataccaagtgttggaaaggatgtgaaggaactgaaactcttgtttgcagctggtgagactgcaaaatggtaggatcactctgtagtgcattttggcag-tttcttaaatagttaaaaatacacccaccatatgatccagccactctacttc----tagttacccaagagaaatttaaaaatatatacacacagagacacgcatgaacgtttatagcagctttccttgtaattgccaaaataaagaagcaaccaaaa---tatctactatcagttaaatggataaccaaactccaggatatctagatttaaaaatataaaacaagaaaacagaatgctttattaatacatattacatgaacaaatctcaaaatatgctgagtaaaatcagccagattttttaaaagcacatgctgcgtgattctattcacataaattctaggtatt----------gtgaggtaagtaataacaaaaagcaggtcagta i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5029601 610 + 13128814 aaagaaaatacacatggcaaatgagagcattaaaagaaatcctcaataacattagtcactaagataacacaattt-aaaatcacaatgaga-tgcaaatacaaacctactagaatgtccaaaatttgaaaccctgaacgtaccaagtgttggaaaggatgtgaaggaacttaaa--cttgtttgcagctggtgagactgcaaaacggtagtatcaccctgtagagcattttggcag-tatcttaaatagttaaaaatacacccaccatatgatccagccattctacttc----tagttacccaagagaaattttaaaatatat----acagagacacgcatgaatgtttacagctgctttacttgtaatagccaaaataaagaaggaaccaaaa---tacatactatcagttaaatgaataaacaaactccaggatatctagatttagaaatacaaaacaataaaacagaatgctctattaatatatattacatgaacaaatctcaaactatactgagtaaaatttgccagcttttttaaaagtacctgctatataattctattcacatacattctaggtatttataataataacaaagtaagtaataacaaaaagcaggtcagta i saiBol1.JH378168 C 0 C 0 s aotNan1.NW_018487195v1 8742500 607 + 9889416 aaagaaaatacacatggcacacaagagcattaaaagaaatcctcaataacattagtcactaagataacacaattt-aaaatcacaatgaga-tgcaaatacaaacctactagaatggccaaaatttgaaaccctgaacgtaccaagtgttggaaaggatgtgaaggaactgaaactcttgtttgcagctggtgagactacaaaatggtaggatcactctatagtgcattttggcagttttcttaaatagttaaaaatacactcaccatatgatccagccattctacttc----tagttacccaagagaagttttaaaatgtatacatacagagacacgcatgaatgtttacagcagctttacctgtaatagccaaaataaagaagcaaccaaaa---tatctactatcagttaaatggataaacaaactccaggatatctagatctaaaaatacaaaacaataaaacagaatgctctattaatacatattacatgaacaaatctcaaaatatgctgagtaaaatcagccagatttttttaaagtatatgctacgtaattctattcacataaattctaggcgtt----------gcaaggtaagtagtaacaaaaagcaggtcagta i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e cebCap1.NW_016107322v1 9603247 2245 - 14377064 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e cerAty1.NW_012002954v1 8417106 5656 + 21915920 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e chlSab2.chr2 14995294 2085 - 90373283 I e macFas5.chr3 162210888 2064 - 192294377 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=39087.000000 s hg38.chr21_KI270874v1_alt 60534 12 + 166743 gttgcctaggtg s panTro5.chr21 3685047 12 + 33445071 gttgcctaggtg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17311958 12 + 46275980 gttgcctaggtg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3250979 12 - 13858734 gttgcctaggta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4434034 12 + 32716333 gttgcctaggta i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21926559 12 + 50472720 gttgcctaggta i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030211 12 + 13128814 gttgcctaggta i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605492 12 - 14377064 GTTGCCTAGGTA i cebCap1.NW_016107322v1 I 2245 C 0 s aotNan1.NW_018487195v1 8743107 12 + 9889416 gttgcctaggta i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13801019 13813 + 39895921 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e cerAty1.NW_012002954v1 8417106 5656 + 21915920 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e chlSab2.chr2 14995294 2085 - 90373283 I e macFas5.chr3 162210888 2064 - 192294377 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=749068.000000 s hg38.chr21_KI270874v1_alt 60546 259 + 166743 tggtgttaaaatgattgggacacaaaatgaggaaaatttgagcaccacaataattaatgatagtaatgtattataatacc-------tttttaaatgcatgact--atttaaaaaagaaaaagtgac--c-aaaaaattaagaaaaggagaaagaaagcctctactttggaaaagaatgtcaggtagcaaattaaaaataaatgagacaatcagaaaaataacattttgcaaactgcaatataatgactgaatcagg-aaaagtcatcgatg- s panTro5.chr21 3685059 259 + 33445071 tggTGTTAAAATGATTGGGACACAAAATGAggaaaaattgagcaccacaataattaatgatagtaatgtattataatacc-------tttttaaatgcatgact--atttaaaaaagaaaaagtgac--c-aaaaaattaagaaaaggagaaagaaaggctctactttggaaaagaatgtcaggtagcaaattaaaaataaatgagacaatcagaaaaataacattttgcaaactgcaatataatgactgaatcagg-aaaagtcatcgatg- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17311970 259 + 46275980 tggtgttaaaatgattgggacacaaaatgaggaaaatttgagcaccacaataattaatgatagtaatgtattataatacc-------tttttaaatgcatgact--atttaaaaaagaaaaagtgac--c-aaaaaattaagaaaaggagaaagaaaggctctactttggaaaataatgtcaggtagcaaattaaaaataaatgagacaatcagaaaaataacattttgcaaactgcaatataatgactgaatcagg-aaaagtcatcgatg- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3250991 260 - 13858734 tggTATTAAAATGATTGGGATAcaaattgaggaaaatttgagcaccacaataattaattatattaatgtattataatacc-------tttttaaatgcatgact--atttaaaaaagaaaaagtgac--caaaaaaattaagaaaaggagaaagaaaggctctactttggaaaagaatgccaggtagcaaattaaaaataaatgagacaatcagaaaaataacattttgcaaactgcaatataatgactgaatcagg-aaaagtcatcgatg- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4434046 260 + 32716333 tggTGTTAAAATGATTGGGACAcaaattgagaaaaatttgagaaccacaataattaatgatagtaatgtattataatacc-------tttttaaatgcatggct--atttagaaaagaaaaagtgac--caaaaaaattaaggaaaggagaaagaaaggctctactggggaaaagaatgccagatagcaaatttaaaataaatgagacaatcagaaaaataacattttgcaaactacaatataatgactgaatcagc-aaaagtcatcaatt- i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21926571 252 + 50472720 tggtgttgaaatgattgggacacaaactgaggaaactttgagcaccacaataattactgataataatttattataataca--------tttttaatgtatgac----tttaaaaaagaaacaatgac---aaaaaaattaagaaaacg----ggaaaggctctactttggaaaataatgccagctaataaatttaaaataaatatgacaatcagaaaaataacattttgcaaactgcaatctaatgaccaaatcagg-aaaagttatcaatt- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030223 256 + 13128814 tggtgttgacatgattgggacacaaactgaggaaactttgagcaccacaataattagtgatagtaatgtattataatata-------ttttttaatgcatgact--atttaaaaaagaaacagtgac--aaaaaaaatcaagaaaaca----ggaaaggctctactttggaaaatgatgtcagctaataaatttaaaataaatgtgacaatcagataaatagcattttgcaaactgcaatctaatgaccaaatcagg-aaaagtcatcaatt- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605504 258 - 14377064 TGGTGTTGAAATGATTGGGACAcaaactgaggaaactttgagcaccacaataattagtgatagtaatgtattattataca-------ttttttaatgtatgact--atttaaaaaagaaacagtgaccaaaaaaaaatcaagaaaacg----ggaaaggctctactttggaaaataatgtcagctaataaatttaaaataaatgtgacaatcagaaaaagagcattttgcaaactacaatctaatgaccgaatcagg-aaaagtcaccaatt- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743119 254 + 9889416 tggtgttgaaatgattgggacacaaactgaggaaactttgagcaccacgataattagtgataataatgtactataataca--------tttttaatgcatgact--acttaaaaaagaaagagtgac--aaaaaaaattaagaaaacg----gaaaaggctctactttggaaaataatgccagctaataaatttaaaataaatgtgacaatccaaaaaataacattttgaaaacggc-atctaatgaccgaatcagg-aaaagttatcaatt- i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13814832 250 + 39895921 TGCTATTAATAGGACTGAGACAcaaactggtgaaaatttgaggactatagtaa----tggtaataatgta-taaaatacactgaatttttttaaatatgtgagttcatctaaaaaggagaaagagaa--aaaaaaacttaaa----------gagaagcctctcatttgggaaagaatgccagataaaaaat-----ataaatttgataatcagaaaaatgatcatttacaaacc-taatactataatttaatcaggtgtaaattagcaattg i canFam3.chr31 I 13813 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e cerAty1.NW_012002954v1 8417106 5656 + 21915920 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e chlSab2.chr2 14995294 2085 - 90373283 I e macFas5.chr3 162210888 2064 - 192294377 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=16850.000000 s hg38.chr21_KI270874v1_alt 60805 5 + 166743 aatgt s panTro5.chr21 3685318 5 + 33445071 aatgt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312229 5 + 46275980 aatgt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251251 5 - 13858734 aatgt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4434306 5 + 32716333 aatgt i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162212952 5 - 192294377 aaaga i macFas5.chr3 I 2064 C 0 s calJac3.chr21 21926823 5 + 50472720 aatgt i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5030479 5 + 13128814 aatgt i saiBol1.JH378168 C 0 I 2 s cebCap1.NW_016107322v1 9605762 5 - 14377064 aatgt i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8743373 5 + 9889416 aatgt i aotNan1.NW_018487195v1 C 0 I 1 s canFam3.chr31 13815082 5 + 39895921 attct i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e mm10.chr16 78103541 6993 + 98207768 I e colAng1.NW_012120598v1 167420 13695 - 13750039 I e cerAty1.NW_012002954v1 8417106 5656 + 21915920 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I e manLeu1.NW_012102865v1 2164830 10575 + 4234846 T e chlSab2.chr2 14995294 2085 - 90373283 I e rheMac8.chr3 155378016 8829 - 185818997 I a score=213699.000000 s hg38.chr21_KI270874v1_alt 60810 22 + 166743 aaaaaATGATTTATACTTCTAC-- s panTro5.chr21 3685323 22 + 33445071 aaaaaATGATTTATACTTCTAC-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312234 22 + 46275980 aaaaaATGATTTATACTTCTAC-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251256 22 - 13858734 aaaaaATGATTTATACTTCTAC-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4434311 22 + 32716333 aaaacATGATTTATACTTCTAC-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155386845 22 - 185818997 aaaAAATGATTTATACTTCTAC-- i rheMac8.chr3 I 8829 C 0 s macFas5.chr3 162212957 22 - 192294377 aaaAAATGATTTATACTTCTAC-- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8422762 22 + 21915920 AAAAAATGATTTATACTTCTAC-- i cerAty1.NW_012002954v1 I 5656 C 0 s chlSab2.chr2 14997379 22 - 90373283 AAAAAATGATTTCTACTTCTAC-- i chlSab2.chr2 I 2085 C 0 s manLeu1.NW_012102865v1 2154255 22 + 4234846 AAAAAATGATTTATACTTCTAC-- i manLeu1.NW_012102865v1 T 10575 C 0 s colAng1.NW_012120598v1 181115 22 - 13750039 aaaaaaTGATTTATACTTCTAC-- i colAng1.NW_012120598v1 I 13695 C 0 s calJac3.chr21 21926829 22 + 50472720 aaaaAATGATTTCTACTTCTAC-- i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5030486 22 + 13128814 aaaAAATGATTTATACTTCTAC-- i saiBol1.JH378168 I 2 C 0 s cebCap1.NW_016107322v1 9605768 22 - 14377064 aaaaAATGATTTATACTTCTAC-- i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8743379 22 + 9889416 aaaaAATGATTTATACTTCTGC-- i aotNan1.NW_018487195v1 I 1 C 0 s canFam3.chr31 13815087 24 + 39895921 aaaacATGGTTTATACTCTTTTAT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e mm10.chr16 78103541 6993 + 98207768 I e macNem1.NW_012019910v1 8685163 4347 + 9440265 I a score=184868.000000 s hg38.chr21_KI270874v1_alt 60832 21 + 166743 ATATTTTATA-TTTTCACACTT s panTro5.chr21 3685345 21 + 33445071 ATATTTTATA-TTTTCACACTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312256 21 + 46275980 ATATTTTATA-TTTTCACACTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251278 21 - 13858734 ATATTTTATA-TTTTCACACTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4434333 21 + 32716333 ATGTTTTATA-TTTTCACACTT i nomLeu3.chr25 C 0 I 2091 s rheMac8.chr3 155386867 21 - 185818997 ATATTTTACA-TTTTCACACTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162212979 21 - 192294377 ATATTTTACA-TTTTCACACTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8689510 20 + 9440265 ATATTTTACA-TTTTCACAC-T i macNem1.NW_012019910v1 I 4347 C 0 s cerAty1.NW_012002954v1 8422784 21 + 21915920 ATATTTTACA-TTTTCACACTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997401 21 - 90373283 ATATTTTACA-TTTTCACACTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154277 21 + 4234846 ATATTTTACA-TTTTCACACTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181137 21 - 13750039 ATATTTTACA-TTTTCAAACTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926851 22 + 50472720 ATATTTTGTATTTTTCACACTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030508 22 + 13128814 ACATTTTGAATTTTTAACACTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605790 22 - 14377064 ACATTTTGTATTTTTTACACTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743401 22 + 9889416 ACATTTTTTATTTTTCACACTT i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13815111 22 + 39895921 ACACTCTATATATTTCACATTT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e mm10.chr16 78103541 6993 + 98207768 I a score=211061.000000 s hg38.chr21_KI270874v1_alt 60853 23 + 166743 --GAAAAATGACTAACCTTTGTAAA s panTro5.chr21 3685366 23 + 33445071 --GAAAAATGACTAACCTTTGTAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312277 23 + 46275980 --GAAAAATGACTAACCTTTGTAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251299 23 - 13858734 --GAAAAATGACTAACCTTTGTAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436445 23 + 32716333 --GAAAAATGACTAATTTTTGTAAA i nomLeu3.chr25 I 2091 C 0 s rheMac8.chr3 155386888 23 - 185818997 --GAAAAATGACTAACCTTTGTAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213000 23 - 192294377 --GAAAAATGACTAACCTTTGTAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8689530 21 + 9440265 --GAAAAAT-ACT-ACCTTTGTAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8422805 23 + 21915920 --GAAAAATGACTAACCTTTGTAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997422 23 - 90373283 --GAAAAATGACTAACCTTTGTAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154298 23 + 4234846 --GAAAAATGACTAACCTTTGTAAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181158 23 - 13750039 --GAAAAATGACTAACCTTTGAAAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926873 23 + 50472720 --GAAAAATGACTAAACTTCGTAAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030530 23 + 13128814 --GAAAAATGACTAACCTGTGTAAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605812 23 - 14377064 --GAAAAATGACTAACCTTTGTAAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743423 23 + 9889416 --GAAAAATGACTAACAGTTGTAAG i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13815133 24 + 39895921 TATTAAAGCTACTAGCATTCTTAG- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1062049 16695 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e mm10.chr16 78103541 6993 + 98207768 I a score=92869.000000 s hg38.chr21_KI270874v1_alt 60876 7 + 166743 TCTAATA s panTro5.chr21 3685389 7 + 33445071 TCTAATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312300 7 + 46275980 TCTAATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251322 7 - 13858734 TCTAATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436468 7 + 32716333 TCTAACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155386911 7 - 185818997 TCTAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213023 7 - 192294377 TCTAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8689551 7 + 9440265 TCTAATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8422828 7 + 21915920 TCTAATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997445 7 - 90373283 TCTAATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154321 7 + 4234846 TCTAGTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181181 7 - 13750039 TCTAATA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926896 7 + 50472720 TCTAGTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030553 7 + 13128814 TCTAATA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605835 7 - 14377064 TCTAATA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743446 7 + 9889416 TCTAATA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1078744 7 + 2694913 TCTAATA i proCoq1.NW_012144079v1 I 16695 C 0 s canFam3.chr31 13815157 7 + 39895921 TCTAATA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e mm10.chr16 78103541 6993 + 98207768 I a score=375209.000000 s hg38.chr21_KI270874v1_alt 60883 31 + 166743 AG-TTTATATTTGTTGATATTTCTTACCCATG s panTro5.chr21 3685396 31 + 33445071 AG-TTTATATTTGTTGATATTTCTTACCCATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312307 31 + 46275980 AG-TTTATATTTGTTGATATTTCTTACCCATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251329 31 - 13858734 AG-TTTATATTTGTTGATATTTCTTACCCATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436475 31 + 32716333 AG-TTTATATTTGTTGATATTTCTTACCCATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155386918 31 - 185818997 AG-TTTATATTTGTTGATATTTCTTACCCATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213030 31 - 192294377 AG-TTTATATTTGTTGATATTTCTTACCCATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8689558 32 + 9440265 AGTTTTATATTTGTTGATATTTCTTACCCATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8422835 31 + 21915920 AG-TTTATATTTGTTGATATTTCTTACCCACG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997452 31 - 90373283 AG-TTTATATTTATTGATATTTCTTACCCATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154328 31 + 4234846 AG-TTTATATTTGTTGATATTTCTTACCCACG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181188 31 - 13750039 AG-TTTATATTTGTTGATATTTCTTACCCATG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926903 31 + 50472720 AG-TTTACATTTATTGATATTTCTTACCCATG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030560 31 + 13128814 AG-TTTATATTTGTTGATATTTCTTATCCATG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605842 31 - 14377064 TG-TTTTTATTTGTTGATATTTCTTACCCATG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743453 31 + 9889416 AG-TTTACATTTGTTGGTATTTCTTACCCACG i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1078751 31 + 2694913 AT-TTTATGTTTGTTGACATTTCTTACCCATG i proCoq1.NW_012144079v1 C 0 I 62 s mm10.chr16 78110534 30 + 98207768 AG-CTAATATTAGCTGAAGATCTGCTCCCAT- i mm10.chr16 I 6993 C 0 s canFam3.chr31 13815164 30 + 39895921 AT-TTTAAGTTTGCCGGTATCTCTCACCCAG- i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I a score=44760.000000 s hg38.chr21_KI270874v1_alt 60914 4 + 166743 TGTA s panTro5.chr21 3685427 4 + 33445071 TGTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312338 4 + 46275980 TGTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251360 4 - 13858734 TGTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436506 4 + 32716333 TGTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155386949 4 - 185818997 TGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213061 4 - 192294377 TGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8689590 4 + 9440265 TGTA i macNem1.NW_012019910v1 C 0 I 56 s cerAty1.NW_012002954v1 8422866 4 + 21915920 TGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997483 4 - 90373283 TGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154359 4 + 4234846 TGTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181219 4 - 13750039 TGTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926934 4 + 50472720 TGTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030591 4 + 13128814 TGTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605873 4 - 14377064 TGTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743484 4 + 9889416 TGTA i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1078782 62 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e canFam3.chr31 13815194 0 + 39895921 C e mm10.chr16 78110564 0 + 98207768 C a score=214494.000000 s hg38.chr21_KI270874v1_alt 60918 32 + 166743 GGTCTTC-----TTTGTTTGAACAAACTTAAACTTGC s panTro5.chr21 3685431 37 + 33445071 GGTCTTCTTTGATTTGTTTGAACAAACTTAAACTTGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312342 37 + 46275980 GGTCTTCTTTGATTTGTTTGAACAAACTTAAACTTGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251364 37 - 13858734 GGTCTTCTTCGATTTATTTGAACAAACTTAAACTTGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436510 37 + 32716333 GGTCTTCTTCGATTTGTTTGAACAAACTTAAACTTGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155386953 37 - 185818997 TGTCTTCTTCAATTTGTTTGAAAAAACTTAAGTTTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213065 37 - 192294377 TGTCTTCTTCAATTTGTTTGAAAAAACTTAAGTTTGT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8422870 37 + 21915920 TGTCTTCTTCAATTTGTTTGAACAAACTTAAGTTTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997487 37 - 90373283 TGTCTTCTTCAATTTGTTTGAACAAACTTAAGTTTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154363 37 + 4234846 TGTCTTCTTCAATTTGTTTGAACAAACTTAAGCTTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181223 37 - 13750039 TGTCTTCTTCAATTTGTTTGAACAAACTTAAGCTTGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926938 37 + 50472720 TGTCTCTTTCAATTCCTTTACACAAACTCAATCTTGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030595 23 + 13128814 TGTCTCTTTCAATTCCTTT--------------TTGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605877 23 - 14377064 TGTCTCTTTCAATTCCTTT--------------TTGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743488 37 + 9889416 TGTCTCTTTCAAATCCTTTGTACAAATTCAACCTTGT i aotNan1.NW_018487195v1 C 0 C 0 s mm10.chr16 78110564 25 + 98207768 ------------TTCTTTTGCATGAATTCAACCTGAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13815194 23 + 39895921 ------------TTTCTTT--ACAAAACTCAACCTGC i canFam3.chr31 C 0 I 1 e proCoq1.NW_012144079v1 1078782 62 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19173092 8539 + 47401472 I e otoGar3.GL873528 20735947 620 - 38779656 I e macNem1.NW_012019910v1 8689594 56 + 9440265 I a score=119425.000000 s hg38.chr21_KI270874v1_alt 60950 9 + 166743 ACATTTCTC s panTro5.chr21 3685468 9 + 33445071 ACATTTCTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312379 9 + 46275980 ACATTTCTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251401 9 - 13858734 ACATTTCTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436547 9 + 32716333 ACATTTCTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155386990 9 - 185818997 ACATTTCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213102 9 - 192294377 ACATTTCTC i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8422907 9 + 21915920 ACATTTCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997524 9 - 90373283 ACATTTCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154400 9 + 4234846 ACATTTCTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181260 9 - 13750039 ACATTTCTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926975 9 + 50472720 ACATTTCTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030618 9 + 13128814 ACATTTCTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605900 9 - 14377064 ACATTTCTC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743525 9 + 9889416 ACATTTCTC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19181631 9 + 47401472 ACATTTCTC i micMur3.chr31 I 8539 C 0 s mm10.chr16 78110589 9 + 98207768 ACACTTCTC i mm10.chr16 C 0 C 0 s canFam3.chr31 13815218 9 + 39895921 GAATTTCTT i canFam3.chr31 I 1 C 0 e proCoq1.NW_012144079v1 1078782 62 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e otoGar3.GL873528 20735947 620 - 38779656 I e macNem1.NW_012019910v1 8689594 56 + 9440265 I a score=109760.000000 s hg38.chr21_KI270874v1_alt 60959 12 + 166743 TTGTAATACAAA s panTro5.chr21 3685477 12 + 33445071 TTGTAATACAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312388 12 + 46275980 TTGTAATACAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251410 12 - 13858734 TTGTAATACGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436556 12 + 32716333 TTGTAATGGGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155386999 10 - 185818997 --GTAATGGGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213111 10 - 192294377 --GTAATGGGAA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8422916 10 + 21915920 --GTAATGGGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997533 10 - 90373283 --GTAATGGGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154409 10 + 4234846 --ATAATGGGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181269 10 - 13750039 --GTAATGGGAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926984 12 + 50472720 TTGTAATGTGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030627 12 + 13128814 TTGTAATAGGAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605909 12 - 14377064 TTGTAATGGGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743534 12 + 9889416 TTGTAATGGGAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19181640 12 + 47401472 TTGTAATGGGTA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20736567 12 - 38779656 TTGTGATGAATT i otoGar3.GL873528 I 620 C 0 s mm10.chr16 78110598 12 + 98207768 TTGGAATGGGCA i mm10.chr16 C 0 C 0 s canFam3.chr31 13815227 12 + 39895921 TTGTAATGAGCA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1078782 62 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e macNem1.NW_012019910v1 8689594 56 + 9440265 I a score=19000.000000 s hg38.chr21_KI270874v1_alt 60971 1 + 166743 G s panTro5.chr21 3685489 1 + 33445071 G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312400 1 + 46275980 G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251422 1 - 13858734 G i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436568 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155387009 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213121 1 - 192294377 G i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8422926 1 + 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997543 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154419 1 + 4234846 G i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181279 1 - 13750039 G i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926996 1 + 50472720 G i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030639 1 + 13128814 G i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605921 1 - 14377064 G i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743546 1 + 9889416 G i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19181652 1 + 47401472 G i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1078844 1 + 2694913 G i proCoq1.NW_012144079v1 I 62 C 0 s otoGar3.GL873528 20736579 1 - 38779656 G i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78110610 1 + 98207768 G i mm10.chr16 C 0 C 0 s canFam3.chr31 13815239 1 + 39895921 G i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e macNem1.NW_012019910v1 8689594 56 + 9440265 I a score=782629.000000 s hg38.chr21_KI270874v1_alt 60972 55 + 166743 -CAGTTCTGATAAAGGTAT-ATTAAGCTAC-AAACACATGACAGAATTTTCTAGAGAA s panTro5.chr21 3685490 54 + 33445071 -CAGTTCTGATAAAGGT-T-ATTAAGCTAC-AAACACATGACAGAATTTTCTAGAGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312401 54 + 46275980 -CAGTTCTGATAAAGGT-T-ATTAAGCTAC-AAACACATGACAGAATTTTCTAGAGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251423 55 - 13858734 -CAGTTCTGATAAAGGTAC-ATTAAGCTAC-AAACACATGGCAGAATTTTCTAGAGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436569 55 + 32716333 -CAGTTCTGATAATGGTAT-ATTAAGCTAC-AAACACATGGCAGAATTTTCTAGAGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155387010 55 - 185818997 -CAGTTCTGATAAAGGTAT-ATTAAGCTAC-AAACACATGGCGGAATTTTCTAGAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213122 55 - 192294377 -CAGTTCTGATAAAGGTAT-ATTAAGCTAC-AAACACATGGCAGAATTTTCTAGAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8689650 56 + 9440265 -CAGTTCTGA-AAAGGTATAATTAAGCTACAAAACACATGGCAGAATTTTCTAGAGAA i macNem1.NW_012019910v1 I 56 I 129 s cerAty1.NW_012002954v1 8422927 55 + 21915920 -CAGTTCTGATAAAGGTAT-ATTAAGCTAC-AAACACATGGCAGAATTTTCTAGAGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997544 55 - 90373283 -CAGTTCTGATAAAGGTAT-ATTAAGCTAC-AAACACACGGCAGAATTTTCTAGAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154420 55 + 4234846 -CAGTTCTGATAAAGGTAT-ATTAAGTTAC-AAACACATGGCAGAATTTTCTAAAGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181280 55 - 13750039 -CAGTTCTGATAAAGGTAT-ATTAAGCTAC-AAACACATGACAGAATTTTCTAGAGAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21926997 55 + 50472720 -CAGTTCTGATAAAGGCCT-ATTAAGCTAC-AAAGACATGGCAGAATTTTCTAGAGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030640 55 + 13128814 -CAGTTCTGATAAAGGTAT-ATTAAGCTAC-AAAGACCTGGCAGAATTTTCTAGAGAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605922 55 - 14377064 -CAGTTCTGATAAAGGTAT-ATTAATCTAC-AAAGACATGGCAGAATTTGCTAGAGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743547 55 + 9889416 -CAGTTCTGATAAAGGTAT-ATTAAGCTAC-AAAGACATGGCAGAATTTTCTAGAGAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19181653 55 + 47401472 -TAGTTCTGATAAAAGTAT-ATTAAACTGT-AAAAACAGGGCAGCATTTTCTAGGAAA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1078845 55 + 2694913 -CAGTTCTGATAAAAGTAT-ATTAAACTGT-AAAAACAGGGCAGCATTTTCTAGGGAA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20736580 51 - 38779656 -AAATTCTGATAAAAGTAT-GTTA----GT-GAAAACAAGGCAGCATTTTCTAGGGAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78110611 55 + 98207768 -CGATTCTGATTAGCATGT-GTGAAACTATTAAAGGGATGGTAGTGTTTTC-AGAGAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13815240 56 + 39895921 CAATTTTTGATAAAGGTAT-GGTGAACTAC-AAAGTCATGGTAGCATTTTCTAGGGAA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I a score=1406966.000000 s hg38.chr21_KI270874v1_alt 61027 108 + 166743 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAGCAGGTTATTTATAACTCCTGTTCTAATCTAGAAAAT-AACTTAGATCTCTGTTTCAAA-CACTTTTACATATT s panTro5.chr21 3685544 108 + 33445071 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAGCAGGTTATTTATAACTCCTGTTCTAATCTAGAAAAT-AACTTAGATCTCTGTTTCAAA-CACTTTTACATATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312455 108 + 46275980 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAGCAGGTTATTTATAACTCCTGTTCTAATCTAGAAAAT-AACTTAGATCTCTGTTTCAAA-CACTTTTACATATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251478 110 - 13858734 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAGCAGGTTATTTATAACTCCTGTTCTAATCTAGAAAATAAACTTAGATCTCTGTTTCAAACCACTTTTACATATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436624 107 + 32716333 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAACAGGTTATT--TAACTCCTGTTCTAATCTAGAAAAT-AACTTAGATCTCTGTTTCAAACCACTTTTACATATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155387065 109 - 185818997 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAAT-AACGTAGATCTCTGTTTCGAACTACTTTTACATATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213177 109 - 192294377 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAAT-AACGTAGATCTCTGTTTCGAACTACTTTTACATATA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012002954v1 8422982 109 + 21915920 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAAT-AACTTAGATCTCTGTTTCGAACTACTTTTACGTATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997599 109 - 90373283 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAAT-AACTTAGATCTCTGTTTCAAACCACTTTTACATATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2154475 109 + 4234846 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAACAAGCTATTTATAACTCCTGTTCTAATCTAGAAAAT-AACTTAGATCTCTGTTTCAAACCACTTTTACATATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181335 108 - 13750039 GACTTTCTTTGATACA----AAT----AATTCTGGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAATCTAGAAAAT--ACTTAGATCTCTGTTTCAAACCACTTTTACATATA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21927052 109 + 50472720 GACTTTCTTTGATGCA----AAT----AATTCCAGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAGTCTAAAAAAT-AACTTAGATCTCTGTTTCAAACCACTTTTACATATA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030695 104 + 13128814 GACTTTCTTTGATGCA----AAT----AATTCCAGCA-----AAACAGGTTATTTATAACTCCTGTTCTAAACTAGAAAAT-AGTTTAGATATCTGCTTCAAACCACTTTTACAAATA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9605977 108 - 14377064 GACTTTCTTTGATGCA----AAT----AATTCCAGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAGACTAGAAAAT-AACTTAGATCTCTGTTTCAAACCACTTTTACATAT- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743602 109 + 9889416 TACTTTCTTTGATGCA----AAT----AATTCCAGCAACAGTAAACAGGTTATTTATAACTCCTGTTCTAGTGTAAAACAT-AACTTAGATCTCTGTTTCAAACCACTTTTACATATA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19181708 113 + 47401472 GACTTTTTTTGATATAAGTGAAT----AATTCTGGCATCAGTAAACAAGGTATTTATAAGTCCTTTTCCAGTCTGGAAAAT-ACATTATATCTCTGTTTCAAACCATTTTTACAAATA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1078900 113 + 2694913 GACTTTCTTTGATATAAGTGAAT----AATTATGGCATCAGTAAACAAGTTATTTATAAGTTCTTTCCTGGTCTGGAAAAT-AAGTTAGATCTCTGTTTCAAACCATTTTTACAAACA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20736631 113 - 38779656 GACTTTCTATGATACAAATGAAT----AATTCTGGCATCAGTAAATGAGTTATTTATAAGTTCTGTTCTGGTTTGAAAAAT-AAATTAGATCTCTTTTTCAAATCATTTTTACAAATA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78110666 99 + 98207768 GACTTTCCATGGTGCA----AAT------------CAAGGATAGAGAAGTGATTTATAAGTCCTGTTCTG--CTGGAAAAT-AACTACAATGTCTGTCTCAAATCGTTCTCACAAAGA i mm10.chr16 C 0 C 0 s canFam3.chr31 13815296 109 + 39895921 GACTT----TGATACA----AATGAAAAATTCTGGCAATAGTATAAAGGTTATATATAAGTCCTGATCTAGTCTGAAAAAT-AACTTAGATCTCTGTTTCAAGTCATTTTCACAAACA i canFam3.chr31 C 0 I 3 e dasNov3.JH568778 3571305 15392 - 6883506 I e macNem1.NW_012019910v1 8689706 129 + 9440265 I a score=2719076.000000 s hg38.chr21_KI270874v1_alt 61135 219 + 166743 GAGATACA----CATTCA-CAAGAGTCAATAA-AGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGTGCTAATGACAACAATAAGTATAAAATCTTCTT-CAATTTCTATATGTTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTA-----TTCTTCTTGCTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG-----AAAAAACC- s panTro5.chr21 3685652 220 + 33445071 GAGATACA----TATTCA-CAAGATTCAGTAA-AGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGTATAAAATCTTCTT-CAATTTCTATATGTTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTA-----TTCTTCTTGCTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAAACC- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312563 220 + 46275980 GAGATACA----TATTCA-CAAGAGTCAGTAA-AGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCGCTAATGACAACAATAAGTATAAAATCTTCTT-CAATTTCTATATGTTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTA-----TTCTTCTTGCTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAAACC- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251588 220 - 13858734 GAGATACA----TATTCA-CAAGAGTCAATAA-AGGAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGTATAAAATCTTCTT-CAATTTCTATATGTTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTA-----TTCTTCTTGCTGTCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAAACC- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436731 215 + 32716333 GAGATACA----TATTCA-CAAGAGCCTATAA-AGAAAAATGCTTCTATACTATG----TTTTCTGAGATTTTTGCACTAATG---ACAATAAGTATAAAATCTTCTT-CAATTTCTGTATGTTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTA-----TTCTTCTTGCTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAA--T- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155387174 218 - 185818997 GAGATACA----TATTCA-CAAGAGTCAATTA-AGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGCACAAAATCTTCTT-TGATTTCTATACATTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTG-----TTTTTCTTACTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAA--T- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162213286 218 - 192294377 GAGATACA----TATTCA-CAAGAGTCAATTA-AGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGCACAAAATCTTCTT-TGATTTCTATACATTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTG-----TTTTTCTTACTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAA--T- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8689835 218 + 9440265 GAGATACA----TATTCA-CAAGAGTCAATTAGAGAAAAACGC-TTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGCACAAAATCTTCTT-TGATTTCTATACATTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTG-----TTTTTCTTACTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAA--T- i macNem1.NW_012019910v1 I 129 C 0 s cerAty1.NW_012002954v1 8423091 216 + 21915920 GAGATACA----TATTCA-CAAGAGTCAATTA-AGAAAAATGCTTTTATAC--TG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGCACAAAATCTTCTT-TGATTTCTATACATTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTA-----TTCTTCTTGCTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AACAAA--T- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997708 218 - 90373283 GAGATACA----TATTCA-CAAGAGTCAATAA-AGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATTAAAACAATAAGCACAAAATCTTCTT-TGATTTCTATACATTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTG-----TTCTTCTTGCTATCT---TTGATAGCTGACATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAA--T- i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012102865v1 2154584 216 + 4234846 GAGATACA----TATTCA-CC--AGTCAATAA-AGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAATGACAACAATAAGCACAAAATCTTCTT-CGATTTCTATACATTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTA-----TTCTTCTTGCTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AACAAA--T- i manLeu1.NW_012102865v1 C 0 I 15478 s colAng1.NW_012120598v1 181443 218 - 13750039 GAGATACA----TATTCA-CAAGAGTCAATAA-AGAAAAATGCTTTTATACTATG----TTTTCTGAGATTTTTGCACTAACGACAACAATAAGCACAGAATCTTCTT-TGATTTCTATATGTTTGC-----TGAGATTG-----AAGCAAAGAAA-TTGGT-------TGTTTATCTTCTG-----TTCTTCCTGCTATCT---TTGATAGCTGGCATTTC---TTTCTAC---AGAAACAAAAATAAAGTAG----AAAAAA--T- i colAng1.NW_012120598v1 C 0 I 1 s calJac3.chr21 21927161 218 + 50472720 GAGATAGA----TATTCCATAAGAGTCAATAA-ATAAAATGGTTTTT-TACTATG----TTTTCTGAGATTTTTGTGCTAATGACAATAGTAACTATAAAATCTTC----AATTTCTATACATTTTC-----TGAGATTG-----AAGCAAATAAG-TTGCT-----TATATTTATCTTATA-----TTCGTCTGGCTGTCT---TTGATAGCTGGCATTTC---TTACTAC---AGAAACAAAAATAAAGTAG---AAAAAAA--T- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5030799 217 + 13128814 GAGATAGA----TATTCC-TAAGAGTCAATAA-AGAAAAAGGTTTTT-TACTATG----TTTTCTGAGATTTTTGTGCTAATGACAACAGTAAGTATAAAATCTTC----AATTTCTATACATTTAT-----TGAGATTG-----AAGCAAATAAA-TTGGT-----TATGTTTATCTTATA-----TTCTTCTTGCTGTCT---TTGATAGCTGGCATTTC---TTACTAC---AGAAACAAAAATAAAGTAG---AAAAAAA--C- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606085 204 - 14377064 ---ATAGA----TGTTC-----------ATAA-AGAAAAAGGTTTTT-TACTATG----TTTCCTGAGATTTTTGTGCCAATGACAACAGTAAGTATAAAATCTTC----AATTTCTATACATTTTC-----TGAGATTG-----AAGCAAATAAA-TTGGT-----TATGTTTATCTTATA-----TTCTTCTTGCTGTCT---TTGATAGCTGGCATTTC---TTACTAC---AGAAACAAAAATAAAGTAG---AAAAAAA--T- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743711 215 + 9889416 GAGATAGA----TATTCA-TAAGAGTCAATAA-AGAAAAAGGTTTTT-TACTAC-----TTTTCTGAGATTTTTGTGCTAATGACAGCAGTAAGTATAAAATCTTC----AATTTCTATACATTTTC-----TGAGATTG-----AAGCGAATAAA-TTGGT-----TATGTTTATCTTATA-----TTCGTCTTGCTGTCT---TTGATAGCTGGCATTTC---TTACTAC---AGAAACAAAAATAAAGTAG----AAAAAA--T- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19181821 230 + 47401472 CAGACCCA----TATTCA-CAAGAGTCAATAA-AGAAAAATGCTTTTATACAATG----TTTTCTGAGATTTCCATGACAATAACAAGGATAAGTAC---ATGATCTT-TAATTTCTATATATTTTCTAAGATGAGATTG-----AAGCAAAAAGA-TTGGT-----TATGTTTATCTTCCATATTTTTTTTTTTGCTATCT---CTGATAGCTGCAATTTCTCTTTCCCAT---AGAAATAGAAGTAAAATAG----AAAAAA--A- i micMur3.chr31 C 0 I 1 s proCoq1.NW_012144079v1 1079013 223 + 2694913 GAGATACA----CAGTGA-CAAGAGGCAATAA-AGAAAAATGCTTCTTTACTATG----TTTTCTGAGATTCTCATGACAATAACAAGGATAAGTATAAGATGTTCTT-TAATTTCTATACATTTTCTAAGATGAGATTG-----AAGCAAAGAGA-TTGGT-----TATGTTTATCTTCTA-----TTCTTTTTGCTATCT---GTGATACCTGGAATTTCTCTTTTCTAT---AGAAACA-----AAAATAG----AAAAAA--G- i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20736744 229 - 38779656 AAGACACA----TATTTG-CAAGAGTCAATAA-AGAAAAATA-TTTTATACAGTA----TTTCCTGAGATTTTTGTGATAATAACAAGGCTAAGCGTAAAATGTTCTT-TAATTT-TATACATTTTCTAAGATGATATTA-----AAGCAAAGAGA-TGGGT-----TATGTTTATCTTCTT----TTCTTTTTTGCTGTCTAG-CTGATAGCTAGAATTTCTCTTTTCTAT---GGAAACAAAAATAAAAGAA----GCAAAA--A- i otoGar3.GL873528 C 0 I 1 s mm10.chr16 78110765 240 + 98207768 GAGACACAGGCCTATCCA-CAAGAGTCAACAA-AGA----TGTTTTTATACGGTGCTGCCTGCCTGAGGCTTTTGTGCTAATGACAAGG---AGTATAAAATGTTCCT-CAATTTCTATACAT---C-----TAAAATTGTGTGCAAGCAAAGAGG-TTGATAACATTCTCTCTATTTTTTT-----TTATTCTTTTTTTCTGTCTTGACAGCTGGCATTTCTCCTTTCTATATAATAAACAAAGACAAATTTGGGGAAAAAAA---- i mm10.chr16 C 0 C 0 s canFam3.chr31 13815408 217 + 39895921 GAGATACA----TACTCC-CAAAAATCAATAA-AGA----TGCTTT--TACAAAG----TTTTCCAAGATTTTTGTG---ATGACAAGAATGCATGCAAAATGTTCTTCCAATTTCCCCACATTTTATGACGTGAGATTG-----AAGCAGAGAGACTTGGT-----TGTATGTATCTTCCA-----TCATTCTTGCT-------GTGATAGCAGATATTCT-CTTTACTAT---AGAAATAAAAATAAAATAG----AAAAAA--AT i canFam3.chr31 I 3 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I a score=4028730.000000 s hg38.chr21_KI270874v1_alt 61354 248 + 166743 CTCAAATGTCATTGACATGTTTTCAGCAGCTAAGTATGAAATTTAAACATTTCACCTCTGGCAATTTCAGTATTATTTTATATCAATTATCTAGGGAATTACTTCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGAATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACGTGGGGAAATTATGTCAATTATG s panTro5.chr21 3685872 248 + 33445071 CTCAAATGTCATTGACATGTTTTCAGCAGCTAAGTATGAAATTTAAACATTTCACCTCTGGCAATTTCAGTATTATTTTATATCAATTATCTAGGGAATTACTTCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGAATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACGTGGGGAAATTATGTCAATTATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17312783 248 + 46275980 CTCAAATGTCATTGACATGTTTTCAGCAGCTAAGTATGAAATTTAAACATTTCACCTCTGGCAATTTCAGTATTATTTTATATCAATTATCTAGGGAATTACTTCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGAATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACATGGGGAAATTATGTCAATTATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3251808 248 - 13858734 CTCAAATGTCATTGACATGTTTTCAGCAGCTAAGTATGAAATTTAAACATTTCACCTCTGGCAATTTCAGTATTATTTTATATCAATTATCTAGGGAATTACTTCTTTACTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTTATTGAAGCTACTGACAGAATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACGTGGGGAAATTATGTCAATTATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4436946 247 + 32716333 CTCAAATGTCACTGACATGTTTTCAGCAGTTAAGTATGCAATTTAAACATTTCTCC-CTAGCAATTTCAGTATTATTTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAGGTATAAAAACGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGAATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155387392 248 - 185818997 CTCAAATATCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAAGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i rheMac8.chr3 C 0 I 1240 s macFas5.chr3 162213504 248 - 192294377 CTCAAATATCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAAGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8690053 248 + 9440265 CTCAAATATCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAAGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8423307 248 + 21915920 CTCAAATATCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14997927 245 - 90373283 -TCAAATATCATTG--ATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAAGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012102865v1 2170278 248 + 4234846 CTCAAATATCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTGAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i manLeu1.NW_012102865v1 I 15478 C 0 s colAng1.NW_012120598v1 181662 247 - 13750039 -TCAAATATAATTGATATGTTTTCAGCTACTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTAATTTATATCAATTATCTAGGGAATTACTCCTTTATTTAGCTCTAGGTATAAAAAGGAGTAAAATTCCTCCAGTGATTTAAGCTACTGACAGTATTCTGCTAGGAATTTTGAACATACAT--------------CTCTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTTTGTCAATTATG i colAng1.NW_012120598v1 I 1 C 0 s calJac3.chr21 21927379 247 + 50472720 TTCAAATGTCATTGATATGTTTCCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCCAGCAATTTCAGTGTTATTTTATATCAATTATCTAGGGAATTACTCCTTTACTTAACTCTAGGTATAAAAAGGAGT-AAATTCCTCCAGTGATTGAAGCTACTGCCAGTATTCTGTTAGGAATTTTGAACATACAT--------------CTTTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031016 247 + 13128814 TTCAAATGTCATTGATGTGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTATTTTATATCAATTACCTAGGGAATTACTACCTTACTTAGCTCTAGGTATAAAACGGAGT-AAATTCCTCCAGTGATTGAAGCTACTGCCAGTATTCTGATAGGAATTTTGAATATACAT--------------CTTTTCCTTTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606289 247 - 14377064 TTCAAATGTCATTGATGTGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTATTTTATATCAATTATCTAGGGAATTACTCCTTTACTTAGCTCTAGGTATAAAAAGGAGT-AAATTCCTCCAGTGATTGAAGCTACTGCCAGTATTCTATTAGGAATTTTGAATATACAT--------------CTTTTCCTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATGTCAATTATG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8743926 247 + 9889416 TTCAAATGTCATTGATATGTTTTCAGCAGCTAAGTATGCAATTTAAACATTTCACCTCTAGCAATTTCAGTGTTATTTTATGTCAATTATCTAGGGAATTACTCCTTTACTTAGCTCTAGGTATAAAAAGGAGT-AAATTCCTCCAGTGATTGAAGCTACTGCTAGTATTCTGTTAGGAATTTTGAACATACAT--------------CTTTTCTTCTCTCCTTTCAGCAGCAAAGTACCTGGGGAAATTATATCAATTATG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182052 248 + 47401472 CTCAAATGTCACTGATGTGTTTTCAGTAGCTAAGTATGCAAGTTAAATATTTCACCTCTAGCAATTTCAATGTTATTTTATTTCAATTATCTAGGGAACTACTGTTTTATATAGCTCCAGGTATATAAAGGAGTAAAATTTCTCCAGTGATTGAAGCTGGTGCCAGTATTCTGCTAGGAATTTTGAATATACAT--------------CTCTTCCTCTCTTCTTTCAGTAGCAAAATAACTGGGGAAATTATGCCAATTATT i micMur3.chr31 I 1 C 0 s proCoq1.NW_012144079v1 1079237 248 + 2694913 CTCAAATGTCACTGATATGTTTTCAGTAGCTAAATATGCAAGTTAAACATTTCACCTCTAGCAATTTCAATGTTATTTTATTTCAATTATCTAGGGAACTACTGCTTTACATAGCTCCAGGTATAAAAAGGAGTAAAATCCCTCCAGTGATTAAAGCTGTTGCCAGTATTCTGCTAGGAATTTTGAATATACAC--------------CTCTTCTTCTCTTCTTTCAGTAGCAAAATAACTGGGGAAATTAGGCCAATTGTG i proCoq1.NW_012144079v1 I 1 C 0 s otoGar3.GL873528 20736974 246 - 38779656 CTCAAATATCACTGATATGTTTTCAGTAGCTCAGTATGCAATTTAAACATTTCACCGCCAGCAATTTCAGAGTTATTTTATTTCAATTATCTAGGGAACTACTGCTTTATATAGCTCTAGGTACATAAAGGAGTAAAATTCCTTTAGTGATTGAAGCTGTTGCCAGTATTCTGTTAGGAATTTTGAATATGTAT--------------CTCTTCCTTTC--ATTTCAACAGCAAAATAACTGGGGAAATTATGCCAATTAGG i otoGar3.GL873528 I 1 C 0 s mm10.chr16 78111005 244 + 98207768 TTCGAACACGGCTGATATGATTTTAGCAGCTAAGTGTGCAATCTGGACACTTCACCTCTAGCAATTTCAGTAAT-TTTTTTTTCAATTAGCTTGGGAGCTACTGCTTTATATACCTCCAGGTGTGCAGAGCAATGGAATCCCTCCAGTGGTTGAAGCTGCTCTCAGTATTCTGCCAGGAG-TCTGAACACATGT--------------CTACTCCTCTCTCCGTT-AGCAGCAAAATACCTGAGG-GATTGTGTAACTCATG i mm10.chr16 C 0 I 3 s canFam3.chr31 13815625 262 + 39895921 CTCAAATGTTACTGATATGTTTTTAGCAGCAAAGCATGCATTTTGAACATTTCACCTCTGGCAATTTCAGTATTATTTTATTTCAATTAGCTAGGGAACTACTGCTTTATATAGCTGCAGGTGTAAAAGGAAGTGAAATGCCTCTAGTGATTGAGGCTACTGCGAGTATCCTGATAGGAATTTTGAATATACATCCTCTGCATCTCTACTTTTCCTCCTTACTTTTAACATCAAAATATCTGGGGAAATCAAGTTAATTATG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I a score=32608.000000 s hg38.chr21_KI270874v1_alt 61602 5 + 166743 AATTT s panTro5.chr21 3686120 5 + 33445071 AATTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313031 5 + 46275980 AATTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252056 5 - 13858734 AATTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437193 5 + 32716333 AATTT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162213752 5 - 192294377 CTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8690301 5 + 9440265 CATTT i macNem1.NW_012019910v1 C 0 I 5073 s cerAty1.NW_012002954v1 8423555 5 + 21915920 CATTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14998172 5 - 90373283 CATTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2170526 5 + 4234846 CATTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 181909 5 - 13750039 AATTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21927626 5 + 50472720 AATTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031263 5 + 13128814 AATTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606536 5 - 14377064 AATTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744173 5 + 9889416 AATTG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182300 5 + 47401472 AATTG i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1079485 5 + 2694913 AATTG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20737220 5 - 38779656 AATTG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78111252 3 + 98207768 AGT-- i mm10.chr16 I 3 C 0 s canFam3.chr31 13815887 5 + 39895921 AACTG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e rheMac8.chr3 155387640 1240 - 185818997 I a score=205113.000000 s hg38.chr21_KI270874v1_alt 61607 19 + 166743 TTCTGTTATACTTAAAATA s panTro5.chr21 3686125 19 + 33445071 TTCTGTTATACTTAAAATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313036 19 + 46275980 TTCTGTTATACTTAAAATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252061 19 - 13858734 TTCTGTTATACTTAAAATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437198 19 + 32716333 TTCTGTTATATTTAAAATA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162213757 18 - 192294377 CTCCGTCA-ACTTAAAATA i macFas5.chr3 C 0 I 4 s cerAty1.NW_012002954v1 8423560 19 + 21915920 CTCCGTCATACTTAAAATA i cerAty1.NW_012002954v1 C 0 I 1217 s chlSab2.chr2 14998177 19 - 90373283 CTCCATCATACTTAAAATA i chlSab2.chr2 C 0 I 1386 s manLeu1.NW_012102865v1 2170531 19 + 4234846 CTCCATCATACTTAAAATA i manLeu1.NW_012102865v1 C 0 I 8462 s colAng1.NW_012120598v1 181914 19 - 13750039 CTCCATCATACTTAAAATA i colAng1.NW_012120598v1 C 0 I 1226 s calJac3.chr21 21927631 19 + 50472720 TTCTGTTATTCTTAAAATA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031268 19 + 13128814 TTCTGTTATGCTTAAAATA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606541 19 - 14377064 TTCTGTTATGCTTAAAATA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744178 19 + 9889416 TTCTGTTATTCTTAAAATA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182305 19 + 47401472 TTCTGCTATACTTAACATG i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1079490 19 + 2694913 TTCTGCTACACTTAACATG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20737225 19 - 38779656 CTCTGTTATACTTAAAATA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78111255 17 + 98207768 TCCTGTTAT--TTAAAATC i mm10.chr16 C 0 C 0 s canFam3.chr31 13815892 19 + 39895921 TTCTGTTATACTTAGAAAA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e macNem1.NW_012019910v1 8690306 5073 + 9440265 I e rheMac8.chr3 155387640 1240 - 185818997 I a score=60381.000000 s hg38.chr21_KI270874v1_alt 61626 13 + 166743 CATCCTAAGTTTT s panTro5.chr21 3686144 13 + 33445071 CATCCTAAGTTTT i panTro5.chr21 C 0 I 1 s panPan2.chr21 17313055 13 + 46275980 CATCCTAAGTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252080 13 - 13858734 CATCCTAAGTTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437217 13 + 32716333 CATCCTAAGTTTT i nomLeu3.chr25 C 0 I 1 s macFas5.chr3 162213779 13 - 192294377 ttttttaattttt i macFas5.chr3 I 4 I 1201 s calJac3.chr21 21927650 13 + 50472720 CATCCTAAGTTTA i calJac3.chr21 C 0 I 283 s saiBol1.JH378168 5031287 13 + 13128814 CATCCTAAGTTTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606560 7 - 14377064 CACCCTA------ i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744197 13 + 9889416 CATCCTAAGTTTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182324 13 + 47401472 CATTTTTAGTTTT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1079509 13 + 2694913 CATTTTTAGTTTT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20737244 13 - 38779656 CCATCTTAGTTTT i otoGar3.GL873528 C 0 I 2 s mm10.chr16 78111272 13 + 98207768 CATCCTTAGTATT i mm10.chr16 C 0 C 0 s canFam3.chr31 13815911 13 + 39895921 TATCCTTAGTTAA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e colAng1.NW_012120598v1 181933 1226 - 13750039 I e cerAty1.NW_012002954v1 8423579 1217 + 21915920 I e macNem1.NW_012019910v1 8690306 5073 + 9440265 I e manLeu1.NW_012102865v1 2170550 8462 + 4234846 I e chlSab2.chr2 14998196 1386 - 90373283 I e rheMac8.chr3 155387640 1240 - 185818997 I a score=8281.000000 s hg38.chr21_KI270874v1_alt 61639 1 + 166743 A s panTro5.chr21 3686158 1 + 33445071 A i panTro5.chr21 I 1 C 0 s panPan2.chr21 17313068 1 + 46275980 A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252093 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437231 1 + 32716333 A i nomLeu3.chr25 I 1 C 0 s calJac3.chr21 21927946 1 + 50472720 a i calJac3.chr21 I 283 C 0 s saiBol1.JH378168 5031300 1 + 13128814 A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606567 1 - 14377064 A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744210 1 + 9889416 A i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182337 1 + 47401472 A i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1079522 1 + 2694913 A i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20737259 1 - 38779656 A i otoGar3.GL873528 I 2 C 0 s mm10.chr16 78111285 1 + 98207768 A i mm10.chr16 C 0 I 3887 s canFam3.chr31 13815924 1 + 39895921 A i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e colAng1.NW_012120598v1 181933 1226 - 13750039 I e cerAty1.NW_012002954v1 8423579 1217 + 21915920 I e macNem1.NW_012019910v1 8690306 5073 + 9440265 I e manLeu1.NW_012102865v1 2170550 8462 + 4234846 I e chlSab2.chr2 14998196 1386 - 90373283 I e macFas5.chr3 162213792 1201 - 192294377 I e rheMac8.chr3 155387640 1240 - 185818997 I a score=223469.000000 s hg38.chr21_KI270874v1_alt 61640 22 + 166743 ------AAAAAATTAAAGCTTGATGCCG s panTro5.chr21 3686159 22 + 33445071 ------AAAAAATTAAAGCTTGATGCCG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313069 22 + 46275980 ------AAAAAATTAAAGCTTGATGCCG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252094 22 - 13858734 ------AAAAAATTAAGGCTTGATGCTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437232 22 + 32716333 ------AAAAAAATAAAGCTTGACACTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155388880 22 - 185818997 ------aAAAAATTAAAGCTTTACAATG i rheMac8.chr3 I 1240 C 0 s macFas5.chr3 162214993 22 - 192294377 ------aAAAAATTAAAGCTTTACAATG i macFas5.chr3 I 1201 C 0 s macNem1.NW_012019910v1 8695379 22 + 9440265 ------aAAAAATTAAAGCTTTACAATG i macNem1.NW_012019910v1 I 5073 C 0 s cerAty1.NW_012002954v1 8424796 22 + 21915920 ------aAAAAATTAAAGCTTTACAATG i cerAty1.NW_012002954v1 I 1217 C 0 s chlSab2.chr2 14999582 22 - 90373283 ------aAAAAATTAAAGCTTTACAATG i chlSab2.chr2 I 1386 C 0 s manLeu1.NW_012102865v1 2179012 22 + 4234846 ------aAAAAATTAAAGCTTTACAATG i manLeu1.NW_012102865v1 I 8462 C 0 s calJac3.chr21 21927947 22 + 50472720 ------aaaGTATTAAAGCTTTATACGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031301 22 + 13128814 ------AAAGTATTAAAGCTTTATACTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606568 22 - 14377064 ------AAAGTAGTAAAGGTTTATACTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744211 22 + 9889416 ------AAAGTGTTAAAGCTTTATACTG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182338 22 + 47401472 ------AAAATATTAAAGCTTTACACTA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1079523 22 + 2694913 ------AAAATGTTAAAGCTTTACACTA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20737260 22 - 38779656 ------AAACTATTAAAGCTTTACTTTA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13815925 28 + 39895921 AAAAAAAAAAGAATAAAGTTTTACACTG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e mm10.chr16 78111286 3887 + 98207768 I e colAng1.NW_012120598v1 181933 1226 - 13750039 I a score=392070.000000 s hg38.chr21_KI270874v1_alt 61662 29 + 166743 CTGGAAAGTT-TATTAGTTATTATT----------------------AAGAG s panTro5.chr21 3686181 29 + 33445071 CTGGAAAGTT-TATTAGTTATTATT----------------------AAGAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313091 29 + 46275980 CTGGAAAGTT-TATTAGTTATTATT----------------------AAGAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252116 29 - 13858734 CTGGAAAGTT-TATTAGTCATTATT----------------------AAGAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437254 29 + 32716333 CTGGAAAGTT-TATTAGTCATTATT----------------------AAGAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155388902 29 - 185818997 CTGGAAAGTT-TATTAGTCATTGTT----------------------AAGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215015 29 - 192294377 CTGGAAAGTT-TATTAGTCATTGTT----------------------AAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695401 29 + 9440265 CTGGAAAGTT-TATTAGTCATTGTT----------------------AAGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8424818 29 + 21915920 CTGGAAAGTT-TATCAGTCATTATT----------------------AAGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999604 29 - 90373283 CTGGAAAGTT-TATTAGTCATTGTT----------------------AAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179034 29 + 4234846 CTGGAAAGTT-TATCAGTCATTATT----------------------AGGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183159 29 - 13750039 CTGGAAAGTT-TATTAATCATTATT----------------------AAGAG i colAng1.NW_012120598v1 I 1226 C 0 s calJac3.chr21 21927969 26 + 50472720 CTAGAAAGTT-TATTAGTC---ATT----------------------AAGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031323 29 + 13128814 CTAGAAAGTT-TATTAGTCATTATT----------------------AAGAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606590 29 - 14377064 CTAGAAAGTT-TATTAGTTATTATT----------------------AAGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744233 29 + 9889416 CTAGAAAGTT-TATTAGTCATTATT----------------------AAGAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182360 30 + 47401472 CTAGAAAGTTGTATTAGTCATTATT----------------------AAGAG i micMur3.chr31 C 0 I 85 s proCoq1.NW_012144079v1 1079545 30 + 2694913 CTAGAAAGTTGTATTAGTCATTATT----------------------AAGAG i proCoq1.NW_012144079v1 C 0 I 126 s otoGar3.GL873528 20737282 52 - 38779656 CTAGAAAGTTGTGTTAGTCATTAttttttttttttttttttttgagacagag i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13815953 30 + 39895921 CTAGAAAGTTGTATTAGCCATTATC----------------------AAAAG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e mm10.chr16 78111286 3887 + 98207768 I a score=67121.000000 s hg38.chr21_KI270874v1_alt 61691 6 + 166743 CCTGAA s panTro5.chr21 3686210 6 + 33445071 CCTGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313120 6 + 46275980 CCTGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252145 6 - 13858734 CCTGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437283 6 + 32716333 CCTGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155388931 6 - 185818997 CCTGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215044 6 - 192294377 CCTGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695430 6 + 9440265 CCTGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8424847 6 + 21915920 CCTGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999633 6 - 90373283 CCTGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179063 6 + 4234846 CCTGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183188 6 - 13750039 ACTGAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21927995 6 + 50472720 GCTGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031352 6 + 13128814 GCTGAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606619 6 - 14377064 GCTGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744262 6 + 9889416 GCTGAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20737334 6 - 38779656 cctcaa i otoGar3.GL873528 C 0 I 256 s canFam3.chr31 13815983 6 + 39895921 GCTGAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1079575 126 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19182390 85 + 47401472 I e mm10.chr16 78111286 3887 + 98207768 I a score=40296.000000 s hg38.chr21_KI270874v1_alt 61697 4 + 166743 ATAA s panTro5.chr21 3686216 4 + 33445071 ACAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313126 4 + 46275980 ACAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252151 4 - 13858734 ACAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437289 4 + 32716333 ACAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155388937 4 - 185818997 ACAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215050 4 - 192294377 ACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695436 4 + 9440265 ACAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8424853 4 + 21915920 ACAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999639 4 - 90373283 ACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179069 4 + 4234846 ACAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183194 4 - 13750039 ACAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928001 4 + 50472720 ACAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031358 4 + 13128814 ACAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606625 4 - 14377064 ACAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744268 4 + 9889416 ACAA i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13815989 3 + 39895921 ACA- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1079575 126 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19182390 85 + 47401472 I e otoGar3.GL873528 20737340 256 - 38779656 I e mm10.chr16 78111286 3887 + 98207768 I a score=797519.000000 s hg38.chr21_KI270874v1_alt 61701 90 + 166743 ATGAAGAGGCAAGTCCAC---------CAAAAACAAAAATC-CAAAACACAG------------------------AAAAATAGT---ATAACTCTTAAGAAAACAAAGTAGATTTTAATTATTTTT s panTro5.chr21 3686220 90 + 33445071 ATGGAGAGGCAAGTCCAC---------CAAAAACAAAAATC-CAAAACACAG------------------------AAAAATAGT---ATAACTCTTAAGAAAACAAAGTAGATTTTAATTATTTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313130 83 + 46275980 ATGGAGAGTCAAGTCCAC---------CAAAAACAAAAATC--------CAG------------------------AAAAATAGT---ATAACTCTTAAGAAAACAAAGTAGATTTTAATTATTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252155 89 - 13858734 ATGGAGAGGCAAGTCCAC---------C-AAAACAAAAATC-CAAAACACAG------------------------AAAAATAGT---ATAACTCTTAAGAAAACAAGGTAGATTTCAATTAATTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437293 88 + 32716333 ATGGAGAAGCAAGTCCGC---------CAAAAACAAAAATC-CGAAACACAG------------------------AAAAATAGT---ATAA--CTTAAGAAAACAAGGTAGATTTTAATTATTTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155388941 93 - 185818997 CTGGAGAAGCCAGTCCAC---------CAAAAACAAAAATC-CAAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215054 93 - 192294377 CTGGAGAAGCAAGTCCAC---------CAAAAACAAAAATC-CAAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695440 93 + 9440265 CTGGAGAAGCAAGTCCAC---------CAAAAACAAAAATC-CAAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8424857 93 + 21915920 CTGGAGAAGCAAGTCCAC---------CAAAAACAAAAATC-CGAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAACTATGTTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999643 93 - 90373283 CTGGTGAAGCAAGTCCAC---------CAAAAACGAAAATC-CAAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179073 93 + 4234846 CTGGAGAAGCAAGTCCAC---------CAAAAACAAAAATC-CGAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGTTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183198 93 - 13750039 CTGGAGAAGCAAGTCCAC---------CAAAAACAAAAATT-CAAAACACAG------------------------AAAAATAGTATGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATGTTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928005 115 + 50472720 TTGGAGAAGCAAGTCCAC---------CAAAAACAAAAATC-CAAAACACAGATCATGCTGTGAATTTCTGAA--TAAAAATACTGTGATAACTCTTAAGAAAACAAGGTAGattttaattattttt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031362 98 + 13128814 TTGAAGAAG------------------CAAAAACAAAAATC-CAAAACACAGATCATGCTATGAATTTCTGAA--TAAAAACAGTGTAATAACTCTTAAGaaaa-----taaattttaattatt--- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606629 110 - 14377064 TTGAAGAAGCAAGTCCAC---------CAAAAACAGAAATC-CAAAACACAGATCATGCTATGAATTTCTGAA--TAACAACAGTGTGATAACGCTTAAGAAAA-----TAAATTTTAATTATTTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744272 115 + 9889416 TTGGAGAAGCAAGTCGAC---------CAAAAACAAAAATT-CAAAACACAGATCATGCTATGAATTTCTGAA--TAAAAATACTGTGATAACTCTTAAGAAAACAAGGTAGATTTTAATTATTTTT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20737596 97 - 38779656 ATTAAGAGGCAAAACCAC---------AAAAAAT----ATT-GAGATCATGA-------TAGGAATT---------AAAATTAACATGATATCTCTTAAAGAAATAAGGTAGACTTGAATGattttt i otoGar3.GL873528 I 256 I 2 s canFam3.chr31 13815992 123 + 39895921 ---GAGAAGCAAAACCACACACACACACAAAAAAAAAAATAAAAAAACAAAGATCATAGTACATATTTCTGAATTTGAAAGTAATGCGATAATTCTTAAGGAAAAGAAGTA-ACTTTAATGATTTTT i canFam3.chr31 C 0 I 9 e proCoq1.NW_012144079v1 1079575 126 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e micMur3.chr31 19182390 85 + 47401472 I e mm10.chr16 78111286 3887 + 98207768 I a score=79987.000000 s hg38.chr21_KI270874v1_alt 61791 16 + 166743 A-TT-TTTT------ATTTTTAAA s panTro5.chr21 3686310 16 + 33445071 A-TT-TTTT------ATTTTTAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313213 15 + 46275980 A--T-TTTT------ATTTTTAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252244 16 - 13858734 A-TT-TTTT------ATTTTTAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437381 16 + 32716333 A-TT-TTTT------ATTTTTAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389034 11 - 185818997 A-TT------------TTTTTTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215147 11 - 192294377 A-TT------------TTTTTTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695533 10 + 9440265 A--T------------TTTTTTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8424950 16 + 21915920 A-TT-TTTC------ATTTTCAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999736 16 - 90373283 A-TT-TTTT------ATTTTTAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179166 16 + 4234846 A-TT-TTTC------ATTTTCAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183291 17 - 13750039 A-TTTTTTT------ATTTTTAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928120 16 + 50472720 a-tt-tttc------atttttaaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031460 15 + 13128814 --tt-tttc------atttttaaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606739 17 - 14377064 ATTT-TTTC------ATTTTTAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744387 17 + 9889416 ATTT-TTTC------ATTTTTAAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182475 16 + 47401472 -ATT-TTTT------ATTTTTAAA i micMur3.chr31 I 85 C 0 s otoGar3.GL873528 20737695 16 - 38779656 -tgt-tttt------atttttaaa i otoGar3.GL873528 I 2 C 0 s canFam3.chr31 13816124 22 + 39895921 -ACT-ATTTAAAAAGATTTTTAgg i canFam3.chr31 I 9 I 150 e proCoq1.NW_012144079v1 1079575 126 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e mm10.chr16 78111286 3887 + 98207768 I a score=351727.000000 s hg38.chr21_KI270874v1_alt 61807 35 + 166743 AGGAATCAATTAAGAA------GAGAGAAGGATTTAGATTG s panTro5.chr21 3686326 35 + 33445071 AGGAATCAATTAAGAA------GAGAGAAGGATTTAGATTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313228 35 + 46275980 AGGAATCAATTAAGAA------GAGAGAAGGATTTAGATTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252260 35 - 13858734 AGGAATCAATTAAGAA------GAGAGAAGGATTTAGATTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437397 32 + 32716333 AGGAATCAATTAAGAA------GAGAGAAGGATTTAGA--- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389045 35 - 185818997 AGCAATCAATAAAGAA------GAGAGAAGGATTTAGATTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215158 35 - 192294377 AGCAATCAATAAAGAA------GAGAGAAGGATTTAGATTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695543 35 + 9440265 AGCAATCAATAAAGAA------GAGAGAAGGATTTAGATTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8424966 35 + 21915920 AGCAATCAATAAAGAA------GAGAGAAGGATTTAGATTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999752 35 - 90373283 AGTAATCAATAATGAA------GAGAGAAGGATTTAGATTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179182 35 + 4234846 AGCAATCAATAAAGAA------GAGAGAAGGATTTAGATTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183308 35 - 13750039 AGCAATCAGTAAAGAA------GAGAGAAGGATTTAGATTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928136 35 + 50472720 aGGAATCAATAAAGAA------GAAAGAATGATTTAAACTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031475 35 + 13128814 aGGAATCAATAAAGAA------GAGAGAAGGATTTAGACTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606756 35 - 14377064 AGGAATCAATAAAGAA------GAGAGAAGGATTTAGACTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744404 35 + 9889416 AGGAATCAATAAAGAA------GAGAGAAGGATTTAGACTG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182491 32 + 47401472 AGGA---AATTATGAG------AAAAGAAGAATTTAGAttt i micMur3.chr31 C 0 I 2 s otoGar3.GL873528 20737711 27 - 38779656 atga---aattat-----------aaGAAGCATTTAGATTT i otoGar3.GL873528 C 0 I 2 s canFam3.chr31 13816296 38 + 39895921 atgaataaataaataaaatcttaaaaaaTATATTTATG--- i canFam3.chr31 I 150 C 0 e proCoq1.NW_012144079v1 1079575 126 + 2694913 I e dasNov3.JH568778 3571305 15392 - 6883506 I e mm10.chr16 78111286 3887 + 98207768 I a score=379026.000000 s hg38.chr21_KI270874v1_alt 61842 26 + 166743 TTTTTCTTTATTTTTCCAATTTTTAC s panTro5.chr21 3686361 26 + 33445071 TTTTTCTTTATTTTTCCAATTTTTAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313263 26 + 46275980 TTTTTCTTTATTTTTCCAATTTTTAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252295 26 - 13858734 TTTTTCTTTATTTTTCCAATTTTTAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437429 25 + 32716333 -TTTTCTTTATTTTTCCAATTTTTAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389080 26 - 185818997 TTTTACTTTATTTTTCCAATTTTTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215193 26 - 192294377 TTTTACTTTATTTTTCTAATTTTTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695578 26 + 9440265 TTTTACTTTATTTTTCCAATTTTTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425001 26 + 21915920 TTTTACTTTATTTTTCCAATTTTTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999787 26 - 90373283 TTTTACTTTATTTTTCCAATTTTTAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179217 26 + 4234846 TTTTACTTTATTTTTCCAATTTTTGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183343 26 - 13750039 TTTTACTTTATTTTTCCAATTTTTAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928171 26 + 50472720 TTTTTCTTTATTTTTCCAATTGTTGC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031510 26 + 13128814 TTTTTCTTTATTTTTCCAATTTTTAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606791 26 - 14377064 TTTTTCTTTATTTTTCCAATTTTTAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744439 26 + 9889416 TCTTTCTTTATTTTTCCAATTTTTGC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182525 26 + 47401472 cttttctttatttttttaatttttAC i micMur3.chr31 I 2 C 0 s proCoq1.NW_012144079v1 1079701 26 + 2694913 TTTTTCTTTATTTTTTCTAATTTTAC i proCoq1.NW_012144079v1 I 126 C 0 s otoGar3.GL873528 20737740 26 - 38779656 CTTTTCTTTATTTGTTCTATTTTTAC i otoGar3.GL873528 I 2 C 0 s canFam3.chr31 13816334 26 + 39895921 CTTCTCTTTATTTTTCCTATTTTTAC i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3571305 15392 - 6883506 I e mm10.chr16 78111286 3887 + 98207768 I a score=1096495.000000 s hg38.chr21_KI270874v1_alt 61868 74 + 166743 TAAGAATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------AACAAAGATAATTGGAAATTTCCTGCCAATTTAA s panTro5.chr21 3686387 74 + 33445071 TAAGAATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------AACAAAGATAATTGGAAATTTCCTGCCAATTTAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313289 74 + 46275980 TAAGAATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------AACAAAGATAATTGGAAATTTCCTGCCAATTTAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252321 74 - 13858734 TAAGAATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------AACAAAGATAATTGGAAATTTCCTGCCAATTTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437454 74 + 32716333 TAAGAATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------AACAAAGACAACTGGAAATTTCCTGCCAATTTAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389106 74 - 185818997 TAAGGATA-------TATTTCTCAGTTACTGCTT---CCTATA---TCTGCCC---------------ATCAAAGACAACTGGAAATTTCCTGCCAATTCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215219 74 - 192294377 TAAGGATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------ATCAAAGACAACTGGAAATTTCCTGCCAATTCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695604 74 + 9440265 TAAGGATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------ATCAAAGACAACTGGAAATTTCCTGCCAATTCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425027 74 + 21915920 TAAGAATA-------TATTTCTCAGTTATTGCTT---CCTATG---TCTGCCC---------------ATCAAAGACAACTGGAAATTTCCTGCCAATTCAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999813 74 - 90373283 TGAGAATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------ATCAAAGACAACTGGAAATTTCCTGCCAATTCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179243 74 + 4234846 TAAGAATA-------TATTTCTCAGTTATTGCTT---CCTATG---TCTGCCC---------------ATCAAAGACAACTGGAAATTTCCTGCCAATTCAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183369 74 - 13750039 TAAGAATA-------TATTTCTCAGTTACTGCTT---CTTATG---TCTGCCC---------------ATCAAAGACAACTGGAAATTTGCTGCCAATTCAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928197 74 + 50472720 TAAGAATA-------TATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------AACAAAGACCACTGGAAACTTCCTGCCAATTTTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031536 71 + 13128814 TGAGAATA-------CGTTT---ATTTACTGCTT---CCTATG---TCTGCCC---------------AACAAAGACAACTGGAAATTTCCTGCCAATTTAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606817 74 - 14377064 TAAGAATA-------CATTTCTCAGTTACTGCTT---CCTATG---TCTGCCC---------------AACAAAGACAACTGGAAATTTCCTGCCAATTTAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744465 77 + 9889416 TAAGAATA-------TATTTCTCAGTTACTGCTT---CCTATGTCATCTGCCC---------------AACAAAGACAACTGGAAATTTCCTGCCAATTTAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182551 73 + 47401472 TAGGAATA-------TATTTCTCAGTT-CTGCTT---CCTATG---TCTGCCC---------------AACAAAGGCAACTGGAAATTTCCTGCCACTTTAG i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1079727 73 + 2694913 TAGGAATA-------TATTTCTCAGTT-CTGCTT---TCTATG---TCTGCCC---------------AACAAAGGCAACTGGAAATTTCCTGCCACCTTAA i proCoq1.NW_012144079v1 C 0 I 29 s otoGar3.GL873528 20737766 81 - 38779656 TAGGAATATACATAGTATTTCTCAGTTCCTGCTC---TCTGTA---TCTGCCC---------------AACAAAAGCAACTGAAAAGTTCCTTCCACTTTAG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13816360 66 + 39895921 TAAGAATA-------TAATTCTCAGTTCCTGCTT---TCTATA---CCC-----------------------AAGGCAGCTGAAAATTTCCTCCCACTTTAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3586697 90 - 6883506 TAGGAATA-------TACTTCTCAGTTCCTGCTTTTGCATATT---TCTCAGCATGCAAAAAGGAAAAAAAAAAAGAAACTGGAAATTTCTT--CACTTTAA i dasNov3.JH568778 I 15392 C 0 e mm10.chr16 78111286 3887 + 98207768 I a score=51262.000000 s hg38.chr21_KI270874v1_alt 61942 3 + 166743 TCT s panTro5.chr21 3686461 3 + 33445071 TCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313363 3 + 46275980 TCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252395 3 - 13858734 TCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437528 3 + 32716333 TCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389180 3 - 185818997 TCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215293 3 - 192294377 TCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695678 3 + 9440265 TCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425101 3 + 21915920 TCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999887 3 - 90373283 TCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179317 3 + 4234846 TCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183443 3 - 13750039 TCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928271 3 + 50472720 TCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031607 3 + 13128814 TCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606891 3 - 14377064 TCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744542 3 + 9889416 TCT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19182624 3 + 47401472 TCT i micMur3.chr31 C 0 I 2443 s otoGar3.GL873528 20737847 3 - 38779656 CCT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13816426 3 + 39895921 TCT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3586787 3 - 6883506 TCT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1079800 29 + 2694913 I e mm10.chr16 78111286 3887 + 98207768 I a score=125902.000000 s hg38.chr21_KI270874v1_alt 61945 13 + 166743 AAGGAGATTG-TGT s panTro5.chr21 3686464 13 + 33445071 AAGGAGATGG-TGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313366 13 + 46275980 AAGGAGATGG-TGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252398 13 - 13858734 AAGGAGATGG-TGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437531 13 + 32716333 AAGGAGATAG-TCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389183 13 - 185818997 AAGGAGATGG-TCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215296 13 - 192294377 AAGGAGATGG-TCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695681 13 + 9440265 AAGGAGATGG-TCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425104 13 + 21915920 AAGGAGATGG-TCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999890 13 - 90373283 AAGGAGATGG-TCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179320 13 + 4234846 AAGGAGATAG-TCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183446 13 - 13750039 AAGGAGATGG-TCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928274 13 + 50472720 AAGGAGATGG-TCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031610 13 + 13128814 AAGGAGATGG-TCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606894 13 - 14377064 AAGGAGATGG-TCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744545 13 + 9889416 AAGGAGATGG-TCT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20737850 14 - 38779656 TTGGAAATGACTGA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13816429 9 + 39895921 --GGGGA--A-ATT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3586790 13 - 6883506 AGGGAAATTT-TAT i dasNov3.JH568778 C 0 I 3431 e proCoq1.NW_012144079v1 1079800 29 + 2694913 I e micMur3.chr31 19182627 2443 + 47401472 I e mm10.chr16 78111286 3887 + 98207768 I a score=122311.000000 s hg38.chr21_KI270874v1_alt 61958 11 + 166743 ACTTGTTCAAT s panTro5.chr21 3686477 11 + 33445071 ACTTGTTCAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313379 11 + 46275980 ACTTGTTCAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252411 11 - 13858734 ACTTGTTCAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437544 11 + 32716333 ATTTGTTCAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389196 11 - 185818997 ATTTATTCAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215309 11 - 192294377 ATTTATTCAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695694 11 + 9440265 ATTTATTCAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425117 11 + 21915920 ATTTATTCAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999903 11 - 90373283 ATTTATTTAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179333 11 + 4234846 ATTTATTCAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183459 11 - 13750039 ATTTATTCAGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928287 11 + 50472720 ATTTGTTCAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031623 11 + 13128814 ATTTGTTCAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606907 11 - 14377064 ATTTGTTCAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744558 11 + 9889416 ATTTGTTCAAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20737864 11 - 38779656 ATTTACTCAAT i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 13816438 11 + 39895921 ATTCATTCAGT i canFam3.chr31 C 0 I 1 e proCoq1.NW_012144079v1 1079800 29 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e mm10.chr16 78111286 3887 + 98207768 I a score=254997.000000 s hg38.chr21_KI270874v1_alt 61969 20 + 166743 GTACACCACTCTGTTTCcac s panTro5.chr21 3686488 20 + 33445071 GTACACCACTCTGTTTCcac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313390 20 + 46275980 GTACACCACTCTGTTTCcac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252422 20 - 13858734 GTACACCACTCTGTTTCcac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437555 20 + 32716333 GTACGCTACTCTGTTTCCAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389207 20 - 185818997 GTCCACCACTCTGTTTCcac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215320 20 - 192294377 GTCCACCACTCTGTTTCcac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695705 20 + 9440265 GTCCACCACTCTGTTTCcac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425128 20 + 21915920 GTCCACCACTCTGTTTCcac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999914 20 - 90373283 GTCCACTACTCTGTTTCcac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179344 20 + 4234846 GTCCACCACTCTGTTTCcac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183470 20 - 13750039 GTCCACTACTCTGTTTCcac i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928298 20 + 50472720 GTACACTGCTCTGTTTCCAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5031634 20 + 13128814 GTACACTACTCTGTTTCCAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9606918 20 - 14377064 GTACACTACTCTGTTTCCAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8744569 20 + 9889416 GTACACTACTCTGTTTCcac i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1079829 20 + 2694913 GTAGGCTCCTCTGTTTCTAC i proCoq1.NW_012144079v1 I 29 C 0 s otoGar3.GL873528 20737876 20 - 38779656 ATAAGCTATTTTGTTTCTAT i otoGar3.GL873528 I 1 C 0 s canFam3.chr31 13816450 20 + 39895921 GTACTCTATTCTGTTTCCAC i canFam3.chr31 I 1 I 423 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e mm10.chr16 78111286 3887 + 98207768 I a score=1288822.000000 s hg38.chr21_KI270874v1_alt 61989 110 + 166743 accaaatggtctcacatcaattgggcatattgcatttcagttacaacacta----agttatcatcagactccacaggattaagggctgaattttgcacaggattgctctcactg s panTro5.chr21 3686508 110 + 33445071 accaaatggtctcacatcaattgggcatattgcatttcagttacaacacta----agttatcatcagactccacaggattaagggctgaattttgcacaggattgctctcactg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313410 110 + 46275980 accaaatggtctcacatcaattgggcatattgcatttcagttacaacacta----agttatcatcagactccacaggattaagggctgaattttgcacaggattgctctcactg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252442 110 - 13858734 accaaatggtctcacatcaattgggcatattgcatttcaattacaacacta----agttatcatcagaatccacagaattaagggctgaattttgcacaggattgctctcactg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437575 110 + 32716333 ACCAAATGGTCTAacatcaattgggcatattgcatttcaattacaacacta----agttaccatcagactccacaggattaagggctgaattttgcacaagattgctctcactg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389227 110 - 185818997 accaaatcgtctaacatcaattgggcatattgcgtttcaattacaacatta----agttatcctcagactccacaggattaagggctgaattttgcacaagattgctctcactg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215340 110 - 192294377 accaaatcgtctaacatcaattgggcatattgcgtttcaattacaacatta----agttatcgtcagactccacaggattaagggctgaattttgcacaagattgctctcactg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695725 110 + 9440265 accaaatcgtctaacatcaattgggcatattgcgtttcaattacaacatta----agttatcgtcagactccacaggattaagggctgaattttgcacaagattgctctcactg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425148 110 + 21915920 accaaatcgtctaacatcaattgggcatattgcgtttcaattacaacacta----agttatcgtcagactccacaggattaagggctgaattttgcacaagattgctctcactg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 14999934 110 - 90373283 accaaatcatctaacatcaattggacatattgcgtttcaattacaacacta----agttatcgtcagactccacaggattaagggctgaattttgcacaagattgttctcactg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179364 110 + 4234846 accaaatcgtctaacatcaattgggcatattgcgtttcaattacaacacta----agttatcgtcagactccacaggattaagggctgaattttgcacaagattgctctcactg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183490 110 - 13750039 accaaatcgtctaacatcaattgggcatattgcgtttcaattacaacacta----agttattgtcagactccacaggattaagggctgaattttgaacaagattgctctcacta i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928318 88 + 50472720 CCCAAATGGTCTAACAT-AACGGGGCATATTGCATTTCAATTACAACACTA----GGTTATCATCAGAC---------------------TTTTGCACAAGATTGCTCTCACTG i calJac3.chr21 C 0 I 18 s saiBol1.JH378168 5031654 109 + 13128814 CCCAAATGGTCTAACAA-AATCGGGCAGATTGcatttcaattacaatacta----agttatcatcagactccacaggtttaagggctgaattgtgcacaagattgctctcactg i saiBol1.JH378168 C 0 I 6 s cebCap1.NW_016107322v1 9606938 109 - 14377064 CCCAAATGGTCTAACAA-AATtgggcatattgcaattcgattacaacacta----agttatcatcagactccacaggtttaagggctgaattgtgcacaagattgctctcactg i cebCap1.NW_016107322v1 C 0 I 140 s aotNan1.NW_018487195v1 8744589 109 + 9889416 cccaaatggtctaacat-aattgggcatattgcattttagttacaacacta----ggttatcatcagactccacaggtttaagggctgaattttgcacaagatttctctcactg i aotNan1.NW_018487195v1 C 0 I 140 s proCoq1.NW_012144079v1 1079849 110 + 2694913 CCTAAATTGTTTAacaccagttggatatactgcaattcaattatgacacta----agttaacatcagactccacaggtttaagggctcaatcttccacaagactactctcactt i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20737896 97 - 38779656 CTCcaattgtctaataccagttgagtatcctgcaattcaa-----------------ttagcgtgagaccctacagatttaagggcttaattgtccacaaaactattcttacct i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13816893 113 + 39895921 acaAAATGGTCTAATACCAAATGAATATATTGTaattcatttatgacacgaagttagttagcatcagacttcacag-tttaaggactcagttttccacaagactgctctcactt i canFam3.chr31 I 423 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e mm10.chr16 78111286 3887 + 98207768 I a score=318434.000000 s hg38.chr21_KI270874v1_alt 62099 48 + 166743 tagatgccagctgctagactttggggatcctcaagtcacctgcacttc s panTro5.chr21 3686618 48 + 33445071 tagatgccagctgctagactttggggatcctcaagtcacctgcacttc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313520 48 + 46275980 tagatgccagctgctagactttggggatcctcaagtcacctgcacttc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252552 48 - 13858734 tagatgccagctgctagcctttggggttcctcaagtcacctgcacttc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437685 48 + 32716333 tagatgccagctgctagcctttggggatcctcaagtcacctgcacctc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389337 45 - 185818997 tagatgctagctgctagtctttgggga---tcaagtcacctgcacttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215450 45 - 192294377 tagatgctagctgctagtctttgggga---tcaagtcacctgcacttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695835 45 + 9440265 tagatgctagctgctagtctttgggga---tcaagtcacctgcacttc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425258 48 + 21915920 tagatgctagctgctggtctttggggatcctcaagtcacctgcacttc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000044 41 - 90373283 taga-------tggtagtctttggggatcctcaagtcacctgcacttc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179474 48 + 4234846 tagatgctagctgctagtctttggggatcctcaagtcacctgcacttc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183600 48 - 13750039 tagatgccagctgctagtctttggggatcctcaagtcacctgcacttc i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5031769 19 + 13128814 cagaag-----tgcaag----tgaagat-------------------- i saiBol1.JH378168 I 6 C 0 s proCoq1.NW_012144079v1 1079959 47 + 2694913 cagatgccagctgcaagtctt-agggttccccaagccacctgcacttc i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20737993 48 - 38779656 caggtgccagctgcaagtgttgggggctccccaagccacttgtaggtc i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13817006 48 + 39895921 caaaggcaagctgcaaatctctgagggtccaccaggcacctgtacttc i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8744698 140 + 9889416 I e cebCap1.NW_016107322v1 9607047 140 - 14377064 I e calJac3.chr21 21928406 18 + 50472720 I e mm10.chr16 78111286 3887 + 98207768 I a score=227486.000000 s hg38.chr21_KI270874v1_alt 62147 25 + 166743 tgaccaattggttattaattcagga s panTro5.chr21 3686666 25 + 33445071 tgaccaattggttattaattcagga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313568 25 + 46275980 tgaccaattggttattaattcagga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252600 25 - 13858734 tgaccaattggttattaattcagga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437733 25 + 32716333 tgaccaattggttattaattcagga i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389382 25 - 185818997 tgaccaattagttattgattcagaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215495 25 - 192294377 tgaccaattagttattgattcagaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695880 25 + 9440265 tgaccaattagttattgattcagaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425306 25 + 21915920 tgaccaattagttattgattcagga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000085 25 - 90373283 tgaccaattagttattgattcagga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179522 25 + 4234846 tgaccaattagttattgattcagga i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183648 25 - 13750039 tgaccaattagttattgattcagga i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928424 25 + 50472720 TAAACATTTggttactaactcagga i calJac3.chr21 I 18 C 0 s saiBol1.JH378168 5031788 18 + 13128814 -------ttggttactaattcagga i saiBol1.JH378168 C 0 C 0 s proCoq1.NW_012144079v1 1080006 25 + 2694913 tgaccaaccgactactaattcagga i proCoq1.NW_012144079v1 C 0 I 1111 s otoGar3.GL873528 20738041 25 - 38779656 tcaccaatgggcaactaatcctgga i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13817054 25 + 39895921 tgatcaactggcttccaactcagga i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8744698 140 + 9889416 I e cebCap1.NW_016107322v1 9607047 140 - 14377064 I e mm10.chr16 78111286 3887 + 98207768 I a score=88743.000000 s hg38.chr21_KI270874v1_alt 62172 9 + 166743 agtccccat s panTro5.chr21 3686691 9 + 33445071 agtccccat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313593 9 + 46275980 agtccccat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252625 9 - 13858734 agtctccat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437758 9 + 32716333 agtccccat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389407 9 - 185818997 agtccccat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215520 9 - 192294377 agtccccat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695905 9 + 9440265 agtccccat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425331 9 + 21915920 agtccccat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000110 9 - 90373283 agtccccat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179547 9 + 4234846 agtccccat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183673 9 - 13750039 agtccccat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928449 9 + 50472720 ggtccccat i calJac3.chr21 C 0 I 88 s saiBol1.JH378168 5031806 9 + 13128814 ggtccccat i saiBol1.JH378168 C 0 I 88 s otoGar3.GL873528 20738066 9 - 38779656 gctccctat i otoGar3.GL873528 C 0 I 83 s canFam3.chr31 13817079 9 + 39895921 ggtccccac i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1080031 1111 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8744698 140 + 9889416 I e cebCap1.NW_016107322v1 9607047 140 - 14377064 I e mm10.chr16 78111286 3887 + 98207768 I a score=5157577.000000 s hg38.chr21_KI270874v1_alt 62181 487 + 166743 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAAA-GATATTGAAATggcaaggtctggcaggggatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tatttgc----caaccaagcagctcccctgaacttcggcattcagagtttttattagagtttcatgttttt---------------------------aagcgagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatggccagcccccatttcgaagctatctaggggcccatcatgtgttgcaccatatcagcataacaaagacattcttatacttcatgaaat------------tgtaagg-------attttaggagctccatgccaagaactcaggacagagac----caaa-------tTCTTTATAATACTACA----------TGTTCTTGGTGCCTTTGATTAACTGTGTGAAACACAACCTGTTCCCACCATTGCCTATTGTCTA s panTro5.chr21 3686700 487 + 33445071 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAAA-GATATTGAAATggcaagatctggcaggggatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tatttgc----caaccaagcagctcccctgaacttcagcattcagagtttttattagagtttcatgtattt---------------------------aagcgagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatggccagcccccattttgaagctatctaggggcccatcatgtgttgcaccatatcagcataacaaagacattcttataattcatgaaat------------tgtaagg-------attttaggagctccatgccaagaactcaggacagagac----caaa-------tTCTTTATAATACTACA----------CGTTCTTGGTGCCTTTGATTAACTGTGTGAAACACAACCTGTTCCCACCATTGCCTATTGTCTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17313602 487 + 46275980 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAAA-GATATTGAAATggcaagatctggcaggggatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tatttgc----caaccaagcagctcccctgaacttcagcattcagagtttttattagagtttcatgtattt---------------------------aagcgagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatggccagcccccattttgaagctatctaggggcccataatgtgttgcaccatatcagcataacaaagacattcttataattcatgaaat------------tgtaagg-------attttaggagctccatgccaagaactcaggacagagac----caaa-------tTCTTTATAATACTACA----------CGTTCTTGGTGCCTTTGATTAACTGTGTGAAACACAACCTGTTCCCACCATTGCCTATTGTCTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3252634 487 - 13858734 --------------------------------------------------------------------------------------gacATACGTAAGAGGAC----TAGACAaa-gagatttaaatagcaagatctggcaggggatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttac----caaccaagcagctcccctgaacttcggcattcagagtttttattagagtttcatgtactt---------------------------aagcgagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggttaagctggtc---------------------------------tttctgatggccaacccccatttcgaagctatctaggggcccataatgagttgcaccatattagcataacaaagacattcctgtaattcatgaaat------------tgtaagg-------attttaggagctccatgccaagaactcaggacagagac----caaa-------tTCTTTATAATACTACA----------TGGTCTTGGTGCCTTTGATTAACTGTGTGAAACACAAGCTGCTCCCACCATTGCCTATTGTCTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4437767 487 + 32716333 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAaa-gagatttaaatggcaagatctggcaggagatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttac----caaccaagcagctcccctgaactttggcattcagagtttttattagagtttcacatactt---------------------------aagcaagactgattaaatcattggccatgtgattaagcataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatggcccacccccatttcaaagctatctaggggcccatgatgagctgcaccatatcagcgtaacaaagacattcctataattcatgaaat------------tgtaagg-------aatttaggagctccatgccaagaactcaggacagagac----caaa-------tTCTTTATAACACTATA----------TGGTCTTGGTGCCTTTGATTAACTGTGTGAAACACAACCTGTTCCCACCATTGCCTATTGTCTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389416 487 - 185818997 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAaa-gagatttaaatggcaaggtctggcaggggatacagagcctctgtgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttcc----caaccaagcatctcccctgacctttggcattcagagtttttattagaccttcatgtactt---------------------------aagcaagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccatttcgaagctatctaggggcccatcatgagtcacaccgtatcagtgtaacaaagacattcctataattcatgaaat------------tgtaagg-------gttttaggagctccgtgccaggaactcaggacagagac----taaa-------tTCTTTATACTACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCATCATTGCCTACTGTCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162215529 487 - 192294377 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAaa-gagatttaaatggcaaggtctggcaggggatacagagcctctgtgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttcc----caaccaagcatctcccctgacctttggcattcagagtttttattagaccttcatgtactt---------------------------aagcaagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccatttcgaagctatctaggggcccatcatgagtcacaccatatcagtgtaacaaagacattcctataattcatgaaat------------tgtaagg-------gttttaggagctccgtgccaggaactcaggacagagac----taaa-------tTCTTTATACTACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCATCATTGCCTACTGTCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8695914 487 + 9440265 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAaa-gagatttaaatggcaaggtctggcaggggatacagagcctctgtgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttcc----caaccaagcatctcccctgacctttggcattcagagtttttattagaccttcatgtactt---------------------------aagcaagactgattaaatcattggccatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccatttcgaagctatctaggggcccatcatgagtcacaccatatcagtgtaacaaagacattcctataattcatgaaat------------tgtaagg-------gttttaggagctccgtgccaggaactcaggacagagac----taaa-------tTCTTTATACTACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCATCATTACCTACTGTCTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425340 487 + 21915920 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAaa-gagatttaaatggcaaggtctggcaggggatacagagcctccatgacatctcctatggagtcagggcacatcaccctcacagcacatc----tgtttcc----caaccaagcatctcacctgacctttggcattcagagtttttattagactttcacgtactt---------------------------aagcaagactgattaaatcattggccatgtgattaaacataattttcaatccccctttactctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccatttcaaagctatctaggggcccatcatgagtcacaccatatcagtgtaacaaagacattcctataattcatgaaat------------tgtaagg-------gttttaggagctccgtgccaggaactcaggacagtgac----taaa-------tTCTTTATAATACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCATCATTGCCTATTGTCTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000119 499 - 90373283 --------------------------------------------------------------------------------------gaccTACATAAGAGGAC----TAGACAaa-tagatttaaacggcaaggtctggcaggggatacagagcctctatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttcc----caaccaagcagctcccctgacctttggcattcagagtttttattagactttcacgtactt---------------------------aagcaagactgattaactcattggtcatgtgattaaacataattttcaatccccctttcctctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccattttgaagctatctaggggcccatgatgagtcacaccatatcagtttaacaaagacattcctataattcatgaattataatgaattcatgtaaga-------gttttaggagctccgtgccaggaactcaggacagagac----taaa-------tTCTTTATAATACTACA----------TGCTCTTGGTGTCTTTGATTAACTGTGTGAAACACAAGCTGTTCCCACCATTGCCTATTGTCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2179556 487 + 4234846 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAaa-gagatttaaatggcaaggtctggcaggggatacagagcctccatgacatctcccatggagtcagggcacatcaccctcacagcacatc----tgtttcc----caaccaagcgtctcacctgacctttggcattcagagtttttattagactttcacgtactt---------------------------aagcaagactgattaaatcattggccatgtgattaaacataattttcaatccccctttactctcttgaggtcaggctggcc---------------------------------tttctgatagccaacccccatttcgaagctatctaggggcccatcatgagtcacaccatatcagtgtaacaaagacattcctataattcatgaaat------------tgtaagg-------gttttaggagctccgtgccaggaactcaggacagtgac----taaa-------tgctttataatactaca----------tgctcttggtgtcTTTGATTAACTGTGTGAAACACAAGCTGTTCCCATCATTGCCTATTGTCTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 183682 479 - 13750039 --------------------------------------------------------------------------------------gacATACATAAGAGGAC----TAGACAaa-gagatttaaacggcaaggtctggcaggggatacaaagcctctatgacatctcccatggagtcagagcacatcaccctcacagcacatc----tgtttcc----caaccaagcatctcccctgacctttggcatatggggtttttattagactttcacgtactt---------------------------------gactgattaaatcattggccatgtgattaaac--aattttcaatccccctttcctctcttgagatcaggctgggc---------------------------------tttctgatagccaacccccatttcgaagctatctaggggcccatgatgagtcacaccatatcagtgtaacaaagacattcctataaatcatgaaat------------tgtaagg-------gcttcaggagctccgtgccaggaactcaggacagagac----taaa-------tTCTTTATAATACTACA----------TGGTCTTGGTGTGTTTGATTAACTGTGTGAAACACAAGCTGTTCCCACCATTACCTATTGTCTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21928546 465 + 50472720 --------------------------------------------------------------------------------------gacatacataaaagaac----tagacaag-gagatttaaatggcaaggtctggcaagagatacagagcctctatgacatcccccatggagtcagggcacatcaccctcatagcacatc-------------------------gctccattgagctttggtattcagg--ttttattagagttttatgtactt----------------------------agcaagacttattaa-tcattggccatgcaattaaacttaatttttaatccccctttcctctcctgaggtcaggcaggcc---------------------------------tttctgatggccaaagcccatttcgaag----ctaagggcccatcatgagtcacaccatatcagtgtaacaaagacattcctataattcatgaaat------------tgtaaga-------gttttaagagctccctgccaggaacccaggacaaagac----caaa-------tTCTTTATAATACTACACATGCCTACCTGGTATTTGTGCCTTTGATTGACC-------ACACAAGCTGCTCCCACCATTGCCTACTGTTTA i calJac3.chr21 I 88 C 0 s saiBol1.JH378168 5031903 480 + 13128814 --------------------------------------------------------------------------------------accatacatgaatgaac----tagacaag-gagatttaaatggcaaggtctggcaagagatacagagcctctgtgacatctcccatggagtcggggcatatcaccctcacagcacatc----tgtttac----caaccaagaagctacactgagccttggcattcagg--ttgtattcgagttttatgtactt----------------------------agcaagactgattaa-tcatcggccatgtgattaaacttaatttttaatccccctttcctctcctgaggtcagactggcc---------------------------------tttctgagggccaaagcccatttcgaag----ctaagggcccatcatgagtcacaccatatcagtgtaacaaagacattcccataattcatgaaat------------tgtaaga-------gttttaagagctccatggcaggaactcaggacaaaaac----caaa-------tTCTTTATAATACTACATATGCCTACCTGGTCTT--TGCCTTTGATCAACC-------ACACAAGCTGCTCCCACCATTGCCTACTGTTTA i saiBol1.JH378168 I 88 C 0 s cebCap1.NW_016107322v1 9607187 482 - 14377064 --------------------------------------------------------------------------------------gacatacataagagaac----tagacaag-gagatttaaatggcaaggtctggcaagagatacagagcctctatgacatctcccatggagtcaggtcacatcaccctcacagcacatc----tgtttgc----caaccaagaagctccattgagttttggcattcagg--ttttattagagttttatgtactt----------------------------agcaagactgattaa-tcatcagccatgtgattaaacttaatttttaatccccctttcctctcctgaggtcagactggcc---------------------------------tttctgatggccaaagctcattttgaag----ctaagggcccatcatgagtcacacgatatcagtgtaacaaagacattcctataactcatgaaat------------tgtaagg-------gttttaagagctccatgccaggaactcaggacaaagac----caaa-------tTCTTTATAATACTACATATGCCTACCTGGTCTTTATGCCTTTGATTAACC-------GCACAAGCTGCTCCCACCATTGCCTACTGTTTA i cebCap1.NW_016107322v1 I 140 C 0 s aotNan1.NW_018487195v1 8744838 482 + 9889416 --------------------------------------------------------------------------------------gacatacataagagaag----tagacatg-gagatttaaatggcaaggtctggcaagaggtacagagcctctatgacatctcccttggagtcagggcacatcaacctcacagcacatc----tgtttac----caaccaagaagctccattgagctttggcattcagg--ttttattagagttttatgtactt----------------------------agcaagactgattaa-tcatctgccatgtgattaaacttaatttttaatccccctttcctctcccgaggtcaggctggcc---------------------------------tttctgatggccaaagcccatttcgaag----ctaagggcccatcatgagtcacactttatcagtgtaacaaagacattcctataattcatgaaat------------tgtaagg-------gttttaagagctccatgccaggaactcaggacaaagac----caaa-------tTCTTTATAATACTACACATGCCTACCTGGTCTTTGTGCCTTTGATTAACC-------ACACAAGCTGCTCCCACCATTGCCTACTGTTTA i aotNan1.NW_018487195v1 I 140 C 0 s otoGar3.GL873528 20738158 485 - 38779656 --------------------------------------------------------------------------------------gattcacagaagaagaccaaataaataaa-gagatgcaagtagggtggtctagaaggagacccagagtttcaatgccatcttccatgaagtgaggacacatcaccctcacagcacatc----tatattttaaacaaccagaaagcttcattgagctttattttccagagattttattaaagtttcatttacat---------------------------agtcaaggttgattaaatcattggccacataattgacctcaatctctaatctcc---tcctctctggaggtcaggctggcc---------------------------------tttgtggtggccaaccttcattctgaatctctctaggagcatatcatgagtt--accatattattataacaaagacatacctaccacgcaaggaat------------ttcaagg-------gttttaggagctccatgacagatactcaggacaaagaccaaacaaa-------ttctttattatatcaca---------aAGGTCCTGGTGTCTTTTATTTACC-------ATTCAAAC---TCCTACCACTGCCTGATTTCTA i otoGar3.GL873528 I 83 C 0 s canFam3.chr31 13817088 651 + 39895921 gatcccctccctctttaataattcattaaaacaactcacagaacttaggaaagtgctatacttatgattaccattttattaaaaaggatacccatatgagaac----cagacaaatgagattcatggagcaaggtctagaagggcatgcagaacttgcatgctatccctcatggaatcagggcatgtcacccttctggcgcatctatgtgttcac----caaccaagaaactccactgggtttcaatattcagagtttttattggggtttctttttttttttttttttattggggtttctttacacaggcatgactgattaaat-attggccacatgactgaacccaatcttcaactatcctctcctcccctgaggtcaggctgacccaaagtcacaaatttctaatcacatagttggttcttctgatgaccagcctgcaacctgaagctatttagggacccatcatgagttacagc--attagcataataaagatattcttatcactcaggagat------------tccaaggggttttagttttaggagctccctgccaggaacaccagacaaaaac----cagacaattttttttTTACCTTACTGCACATGCCTAACTGGTTCGGGTGCCTTTGAGTAGCC-------ACACAAGCTACTCTCA-CATTTCCTGTTGTCTA i canFam3.chr31 C 0 I 189 e proCoq1.NW_012144079v1 1080031 1111 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e mm10.chr16 78111286 3887 + 98207768 I a score=55521.000000 s hg38.chr21_KI270874v1_alt 62668 8 + 166743 TTATCTAA s panTro5.chr21 3687187 8 + 33445071 TTATCTAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314089 8 + 46275980 TTATCTAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253121 8 - 13858734 TTATCTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438254 8 + 32716333 TTATCTAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389903 8 - 185818997 GTATCTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216016 8 - 192294377 GTATCTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696401 8 + 9440265 GTATCTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425827 8 + 21915920 GCATCTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000618 8 - 90373283 GTATCTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180043 4 + 4234846 GCAT---- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184161 8 - 13750039 GTATCTAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21929011 8 + 50472720 CTATCTAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5032383 8 + 13128814 CCATCTAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9607669 4 - 14377064 CTAT---- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8745320 8 + 9889416 CTATCTAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20738643 8 - 38779656 GTATCTAA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13817928 8 + 39895921 CCATTTAA i canFam3.chr31 I 189 C 0 e proCoq1.NW_012144079v1 1080031 1111 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e mm10.chr16 78111286 3887 + 98207768 I a score=687733.000000 s hg38.chr21_KI270874v1_alt 62676 77 + 166743 --------------------------------------------------------------------TCAATAAGATCAAG-------------Cata------tgactttactcatgcaggaaattctttcccaataa--gataaagttgc-------------------------aactaaTACACAG s panTro5.chr21 3687195 77 + 33445071 --------------------------------------------------------------------TCAATAAGatcaag-------------cata------ggactttactcgtgcaggaaattctttcccaataa--gataaagttgc-------------------------aactaaTACACAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314097 77 + 46275980 --------------------------------------------------------------------TCAATAAGatcaag-------------cata------ggactttactcgtgcaggaaattctttcccaataa--gataaagttgc-------------------------aactaaTACACAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253129 76 - 13858734 --------------------------------------------------------------------TCAACAAGATCAAG-------------CATA------TGACTTTACTTGTGGAGGAAATTCTTTCCC-ATAA--GATAAAGTTGC-------------------------AACTAATACACAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438262 77 + 32716333 --------------------------------------------------------------------TCAACAAGatcaag-------------cata------tgactttactcatgcaggaaattctttcccaataa--gacaaagttgc-------------------------aactaatacacag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389911 77 - 185818997 --------------------------------------------------------------------CGAATAGGATCAAG-------------Cata------tgactttactcatacaggaaattctttcccagtaa--gataaagctgc-------------------------aactaaTACACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216024 77 - 192294377 --------------------------------------------------------------------CTAATAGGATCAaa-------------cata------tgactttactcatacaggaaattctttcccagtaa--gataaagctgc-------------------------aactaatacacag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696409 77 + 9440265 --------------------------------------------------------------------CTAATAGGATCAAG-------------Cata------tgactttactcatacaggaaattctttcccagtaa--gataaagctgc-------------------------aactaaTACACAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425835 77 + 21915920 --------------------------------------------------------------------CTAATAGGATCAAA-------------CATA------TGACTTTACTCATACAGGAAATTCTTTCCCAGTAA--GATAAAGCTGC-------------------------AACTAATACACAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000626 77 - 90373283 --------------------------------------------------------------------CTAATAGGATCAAG-------------Cata------tgactttactcatacaggaaattctttcccagtaa--gataaagctgc-------------------------aactaacACACAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180047 77 + 4234846 --------------------------------------------------------------------CTAATAGGATCAAA-------------CATA------TGACTTTACTCATACAGGAAATTCTTTCCCAGTAA--GATAAAGCTGC-------------------------AACTAATACACAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184169 77 - 13750039 --------------------------------------------------------------------CTGATAGGATCAAG-------------Cata------tgactttactcgtgcaggaaattatttcccagtaa--gataaagttgc-------------------------aaCTCATACACAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21929019 102 + 50472720 --------------------------------------------------------------------CTAATAGGATCAAG-------------CATA------TGACTTTACTCGTGAAGGAAATTCTTTTTCAGTAA--GATGAAGTCGCAAAAGTCTTGAAAATCCATTTAGTGAACTAATAAGCTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5032391 102 + 13128814 --------------------------------------------------------------------CTAATAGGATCAAG-------------CATA------TGACTTTACTTGTGCAAGAAATTCTTTTTCAGCAA--GATAAAGTCACAAAAGTCTCAAAAATCCATTTAGTGAACTAATACGCTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9607673 102 - 14377064 --------------------------------------------------------------------CTAATAGGATCAAG-------------CATA------TGAGTTTACTTGTGCAAGAAATTCTTTTTCAGTAA--GATAAAGTCGCAAAAGTCTCGAAAATCCATTTAGTGAACTAATAAGCTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8745328 102 + 9889416 --------------------------------------------------------------------CTAATAGGGTCAAG-------------CATA------TGACTTTACTCATGCAGGAAATTCTTCTTCAGTAA--GATAAAGTCGCAAAAGTCTTGAAAATCCATTTAGTGAACTAATAAGCTA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20738651 95 - 38779656 --------------------------------------------------------------------TTAATAGGATCAAG-------------aaca------tgactttactattgcaggaaactcttgtctagtaagTGGCAAAATCTT---------AAAATTCCatttatataaataataaatta i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78115173 78 + 98207768 --------------------------------------------------------------------TCAACAGGAT-------------------TG------TTATCTTCCTATTGAAGAGAAAATTTACCCAGTAA--AAT--CGTTGCAAGCATCTG----------------AAATTCCACGCTA i mm10.chr16 I 3887 C 0 s canFam3.chr31 13817936 189 + 39895921 TCAATTAAACAATCTCTGTGGCCTAATGAATTTATGCCTTGAGAGACAAGCTGCCTACAACTAACTTCTTAATGGGATCAAGAACCAAGATTGTTCATATGAACTTGACTTTACTATAGCAGGAAATTTTTGTAAAATTA--GGTAAAGTTGTAGAAATCCTGAAAATCCATTCATCCAAATAGCCAACTA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1080031 1111 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I a score=430810.000000 s hg38.chr21_KI270874v1_alt 62753 35 + 166743 TTCAACTAGCTTC-------CTCTCAAAATAATAGA------------------------------------TTGTTT s panTro5.chr21 3687272 35 + 33445071 TTCAACTAGCTTC-------CTCTCAAAATAATAGA------------------------------------TTGTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314174 35 + 46275980 TTCAACTAGCTTC-------CTCTCAAAATAATAGA------------------------------------TTGTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253205 35 - 13858734 TTCAACTAGCTTC-------CTGTCAAAATAATAGG------------------------------------TTGCTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438339 35 + 32716333 ttcaactggcttc-------ctctcaaaataatagg------------------------------------ttgctt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155389988 35 - 185818997 TTCAACTAGCTTC-------CTTTCAAAATAATAGG------------------------------------TTGCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216101 35 - 192294377 ttcaactaacttc-------ctttcaaaataatagg------------------------------------ttgctt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696486 35 + 9440265 TTCAACTAGCTTC-------CTTTCAAAATAATAGG------------------------------------TTGCTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425912 35 + 21915920 TTCAACTAGCTTC-------CTTTCGAAATAATAGG------------------------------------TTGCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000703 35 - 90373283 TTCAACTAGCTTC-------CTCTCAAAATAATAGG------------------------------------TTGCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180124 35 + 4234846 TTCAACTAGCTTC-------CTTTCGAAATAATAGG------------------------------------TTGCTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184246 35 - 13750039 TTCAACTAGCTTC-------CTCTCAAAATAACAGG------------------------------------TTGCTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21929121 35 + 50472720 TTCAACTAGCTTC-------CTCTCAAAATGATAGG------------------------------------TTGCTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5032493 35 + 13128814 TTCAACTAGCTTC-------TTCTCAAAATGATAGG------------------------------------TTGCTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9607775 35 - 14377064 TTCAACTAGCTTC-------CTCTCAAAATGATAGG------------------------------------TTGCTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8745430 35 + 9889416 TTCAACTAGCTTC-------CTCTCAAAATGATAGG------------------------------------TTGCTT i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1081142 35 + 2694913 TTCAACTAGCTCC-------CTCTCAAAACAATAGG------------------------------------TTGCTC i proCoq1.NW_012144079v1 I 1111 C 0 s otoGar3.GL873528 20738746 71 - 38779656 ttCTGCTACCTCC-------CTCTCAAAACAATAGGTTCAGCActgtagtcccagctactgaggcaagagaattgctt i otoGar3.GL873528 C 0 I 144 s mm10.chr16 78115251 35 + 98207768 TTTAATTAGCTCCTCAAATACTCCCAAGCAAGTAG------------------------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr31 13818125 31 + 39895921 TTCAACCAGCCTC-------CTCTCAAAAGAATTGT------------------------------------TC---- i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I a score=2045435.000000 s hg38.chr21_KI270874v1_alt 62788 162 + 166743 ATCAGTGTAAATGAGTCTTCCTGTGGACAATATACAACTCAAA-AGGCCAAATTACTTGTTTATCA------------AATGACta----attatcaagacttactttaaaaccctcacct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccaattccaac-aacc s panTro5.chr21 3687307 162 + 33445071 ATCAGTGTAAATGACTCTTCCTGTGGACAATATACAACTCAAA-AGGCCAAATTACTTGTTTATCA------------AATGACta----attatcaagacttactttaaaaccctcacct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccaattccaac-aacc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314209 162 + 46275980 ATCAGTGTAAATGACTCTTCCTGTGGACAATATACAACTCAAA-AGGCCAAATTACTTGTTTATCA------------AATGACta----attatcaagacttactttaaaaccctcacct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccaattccaac-aacc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253240 159 - 13858734 ATCAGTGTAAATGAC---TCCTGTGGACAATATACAACTCAAA-AGGCCAAATTACTTGTTTATCA------------AATGACta----attatcaagacttactttaaaaccctcacct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccaattccaac-aacc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438374 162 + 32716333 atcagtgtaaatgactcttcctgtggacaatatacagctcaaa-aggacaaattacttgttcatca------------aatgacta----attatcaagacttactttaaaaccttcacct----tgatgtgtcaacaaatcctaaactatta-catcttgcacattgtccaattccaac-aact i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390023 166 - 185818997 ATCAGTGTAAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTActtgtttatca------------aatgactaattaattatcaagccttactttgaaaccctcacct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccaattccaac-aacc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216136 166 - 192294377 atcagtgtaaatgactcctcctgtggacaatacacagctcaaa-aggccaaattacttgtttatca------------aatgactaattaattatcaagccttactttgaaaccctcacct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccaattccaac-aacc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696521 166 + 9440265 ATCAGTGTAAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTActtgtttatca------------aatgactaattaattatcaagccttactttgaaaccctcacct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccagttccaac-aacc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8425947 166 + 21915920 ATCAGTGTAAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTActtgtttatca------------aatgactaattaattatcaagccttactttgaaaccctcatct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccaattccaac-aacc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000738 162 - 90373283 ATCAGTGTAAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTActtgtttatca------------aatgacta----attatcaagccttactttaaaaccctcacct----tgatgtgtcaactaatcctaaactatta-catcttgtacattgtccaattccaac-aacc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180159 166 + 4234846 ATCAGTGTAAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTActtgtttatca------------aatgactaattgattatcaagccttactttgaaaccctcatct----tgatgtgtcaactaatcctaaactatta-catcttgcacattgtccaattccaac-aacc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184281 166 - 13750039 ATCAGTGTAAATGACTCCTCCTGTGGACAATACACAGCTCAAA-AGGCCAAATTActtgtttatca------------aatgactaattaactatcaagccttactttaaaaccctcacct----tgatgtgtcaactaatcctaaactatta-caacttgcacattgtccaattccaac-aacc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21929156 155 + 50472720 ATTGGTGTAAATGACTCCTCGGGTGGACAATATACAGCTCAAA-TGACCAAATTACTTGTTTATCA------------AATGAC----taattatcaagacttactttaaaaccctcacct----tgatgtgtcaactaaccctaaactatta-c-------acattgtccagttccaac-aacc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5032528 155 + 13128814 ATCAGTGTAAATGACTCCTCCTGTGGACAATATACAGTACAAA-TGACCAAATTACTTGTTTATCA------------AATGAC----TAATTATCATGActtactttaaaaccttcacct----tgatgtgtcaactaatcctaaactatta-t-------acattgtccaattccaac-aacc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9607810 163 - 14377064 ATCAGTGTAAATGACTCCTCCTGTGGACAATATACAGCTCAAA-TGACCAAATTACTTGTTTATCA------------AGTGACTAATTAATTATCACGACTTACTTTAAAACCCTCAACTAATGTGATGTGTCAACTAATCCTAAACTATTC-C-------ACATTGTCCAATTCCAAC-AACC i cebCap1.NW_016107322v1 C 0 I 2004 s aotNan1.NW_018487195v1 8745465 159 + 9889416 ATCAGTGTAAATGACTCCTCCTGTGGACAATGTACAGCTCAAA-TTATCAAATTACTTGTTTatca------------aatgactaattaattatcaagacttactttaaaaccctcacct----tgatgtgtcaactaatcctaaactatta-c-------acattgtccaattccaac-aacc i aotNan1.NW_018487195v1 C 0 I 2108 s proCoq1.NW_012144079v1 1081177 167 + 2694913 ATCAGAGTAAATAACTCCTCCTGTGTATAATACCTACCTTGAA-AGGGAAAATTACTCGTTTatca------------aatgactggttaattatcaagacttacttcaaaactcccacct----tgctttgtacactaataccaaactatca-tatcatgcatattgtctaatcccaactaacc i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20738961 180 - 38779656 ATCAGAGTAAATAACTCTTCCTATGTATAATATATACCTTGAA-AGGGCAAATTACTTGCTTCTCAAAttatcaagataattactggttaattatcaagacatacttcaaaagtctcacct----tgctgtgttcattaatcccaaactattattatcacatatactatccaagcccaactaagc i otoGar3.GL873528 I 144 I 1 s mm10.chr16 78115286 150 + 98207768 --------------CTTCTCTTGAGAAGA--GAACAGCTCAAATGGGGTGAATTGCTTGCTTCCCC------------CAAGGTTT-GTAATGATCAAGATTTACTTCTAAACCTTCACCT----TGGTGTAACCACTATTACTAAACTGGGA-AATTGTATACATTTCCCTATTCCAAC-TACA i mm10.chr16 C 0 C 0 s canFam3.chr31 13818156 166 + 39895921 ATCAGAATAAATAGCTCCTCCTATGGACAACACATAATTCAAA-AGGATCGATTACTTGGCTATTA------------AATGACTCTCTATGTatctaaacttactgcaaaactctcactt----tgctatgcttactcatcttaaattatta-tatcatgagggctgttcaatcccaat-taac i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I a score=101380.000000 s hg38.chr21_KI270874v1_alt 62950 11 + 166743 gccattattaa s panTro5.chr21 3687469 11 + 33445071 gccattattaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314371 11 + 46275980 gccattattaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253399 11 - 13858734 gccattattaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438536 11 + 32716333 gccgttattaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390189 11 - 185818997 cccattattaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216302 11 - 192294377 cccattattaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696687 11 + 9440265 cccattattaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426113 11 + 21915920 cccattattaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000900 11 - 90373283 gccattattaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180325 11 + 4234846 cccattattaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184447 11 - 13750039 cccattattaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21929311 10 + 50472720 -ccatcattaa i calJac3.chr21 C 0 I 2056 s saiBol1.JH378168 5032683 10 + 13128814 -ccatcattaa i saiBol1.JH378168 C 0 I 2067 s proCoq1.NW_012144079v1 1081345 11 + 2694913 cctatcattaa i proCoq1.NW_012144079v1 I 1 C 0 s otoGar3.GL873528 20739142 11 - 38779656 cctatcattaa i otoGar3.GL873528 I 1 C 0 s mm10.chr16 78115436 8 + 98207768 CCAACTAT--- i mm10.chr16 C 0 C 0 s canFam3.chr31 13818322 11 + 39895921 cccatcaatga i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I a score=88530.000000 s hg38.chr21_KI270874v1_alt 62961 15 + 166743 aagacacacctaaag s panTro5.chr21 3687480 15 + 33445071 aagacatacctaaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314382 15 + 46275980 aagacatacctaaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253410 15 - 13858734 aagacatacctaaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438547 15 + 32716333 aagacatacctaaag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390200 15 - 185818997 aagacatagccaaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216313 15 - 192294377 aagacatagctaaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696698 15 + 9440265 aagacatagctaaag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426124 15 + 21915920 aagacatagctaaag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000911 15 - 90373283 aagatgtagctaaag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180336 15 + 4234846 aagacatagctaaag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184458 15 - 13750039 aagacgtagctaaag i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1081356 15 + 2694913 aagattcacctaaaa i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20739153 14 - 38779656 aaaa-tcacctaaag i otoGar3.GL873528 C 0 I 723 s mm10.chr16 78115444 8 + 98207768 -ATATATAT------ i mm10.chr16 C 0 C 0 s canFam3.chr31 13818333 14 + 39895921 aagacct-cctaaaa i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=392076.000000 s hg38.chr21_KI270874v1_alt 62976 57 + 166743 ccatatgccaaaggcttataattacatgtctttaatctccctctttccaagatacga s panTro5.chr21 3687495 57 + 33445071 ccatatgccaaaggcttataattacatgtctttaatctccctctttccaagatacga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314397 57 + 46275980 ccatatgccaaaggcttataattacatgtctttaatctccctctttccaagatacga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253425 57 - 13858734 ccataccccaaaggcttataattacatgtctttaatctccctctttccaagatacag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438562 57 + 32716333 ccataccccaaaggcttataattaaatgtctttaatctccctcttttcaagatacaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390215 57 - 185818997 ccataccccaaaggcttataattatatgtctttaatcgccctctttccaatatacaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216328 57 - 192294377 ccataccccaaaggcttataattatatgtctttaatcgccctctttccaatatacaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696713 57 + 9440265 ccataccccaaaggcttataattatatgtctttaatcgccctctttccaatatacaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426139 57 + 21915920 ccataccccaaaggcttataattatatgtctttaatcgccctctttccaatatacaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000926 57 - 90373283 ccataccccaaaggcttctaattatatgtctttaatctccctctttccaatatacaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180351 57 + 4234846 ccataccccaaaggcttataatcatatgtctttaatcgccctctttccaatatacaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184473 57 - 13750039 tcatatcccaaaggcttataattatgtgtctttaatctccctctttccaatatacaa i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1081371 57 + 2694913 ctagatcccaaattcatataactgtatgttcttgacctccctttttccaagatacaa i proCoq1.NW_012144079v1 C 0 I 1 s mm10.chr16 78115452 56 + 98207768 CCAGGCTACAAAATGTTGTAAGTCTATGACCTTCATTTCTC-CAACCTAAGATATTA i mm10.chr16 C 0 I 1 s canFam3.chr31 13818347 57 + 39895921 ccagaccccaaattcttataaacacctgcccttaatctctcctcttttaaaatacta i canFam3.chr31 C 0 I 191 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e otoGar3.GL873528 20739167 723 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=96234.000000 s hg38.chr21_KI270874v1_alt 63033 12 + 166743 taaaattctttc s panTro5.chr21 3687552 12 + 33445071 taaaattctttc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314454 12 + 46275980 taaaattctttc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253482 12 - 13858734 taaaattctttc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438619 12 + 32716333 taaaattctttc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390272 12 - 185818997 taaaattctttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216385 12 - 192294377 taaaattctttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696770 12 + 9440265 taaaattctttc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426196 12 + 21915920 taaaattctttc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000983 12 - 90373283 tgaaattatttc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180408 12 + 4234846 taaaattctttc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184530 12 - 13750039 tgaaattctttc i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1081429 12 + 2694913 taaaactttttc i proCoq1.NW_012144079v1 I 1 C 0 s mm10.chr16 78115509 12 + 98207768 TAAGATTCGTTT i mm10.chr16 I 1 C 0 s canFam3.chr31 13818595 12 + 39895921 taagattctgtc i canFam3.chr31 I 191 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e otoGar3.GL873528 20739167 723 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=1021082.000000 s hg38.chr21_KI270874v1_alt 63045 120 + 166743 aagaagatggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagctggcCATCAATAATAGCCACTGAAACTTTTCTTTCTGTAAAA s panTro5.chr21 3687564 120 + 33445071 aagaaggtggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACTTTTCTTTCTGTAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314466 120 + 46275980 aagaaggtggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACTTTTCTTTCTGTAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253494 119 - 13858734 aagaag-tggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACTTTTCTTTCTGTAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438631 120 + 32716333 aagaaggtggtctttcttactgcagaataataa-----actttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCTCTGAAACTTTTCTTTCTGTAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390284 119 - 185818997 aagaaggtggtctttcttactgcag-ataataa-----gctttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAATATTTCTTTCTGTAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216397 119 - 192294377 aagaaggtggtctttcttactgcag-ataataa-----gctttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACATTTCTTTCTGTAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696782 119 + 9440265 aagaaggtggtctttcttactgcag-ataataa-----gctttactaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACATTTCTTTCTGTAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426208 119 + 21915920 aagaaggtggtctttcttactgcag-ataataa-----gctttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACATTTCTTTCTGTAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15000995 120 - 90373283 aagaaggtggtctttcttactgcagaataataa-----gctttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAGTAATAGCCACTGAAACATTTCTTTCTGTAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180420 119 + 4234846 aagaaggtggtctttcttactgcag-ataataa-----gctttgctaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACATTTCTTTCTGTAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184542 119 - 13750039 aggaaggtggtctttcttactgcagaataat-a-----gctatggtaaatcaatttattatttcagtggtcttttcaaggagttggcCATCAATAATAGCCACTGAAACATTTTTTTCTGTAAAA i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1081441 123 + 2694913 aaaaaggtggtctctctttctgcagaata--aaactttgctttgcttaaccaatttattatgtcagtggtcctttccagaagttgacCATCAATAGTGGCCACTGAAAATTTTCTTCCTGTAAAA i proCoq1.NW_012144079v1 C 0 I 2417 s otoGar3.GL873528 20739890 125 - 38779656 aaaaaagtgggctccctttctgcagaataataaactttgctttgcttaaccaatttattatttcagtggtcttttcaagaagttgGTCATCAATAATATCCACTGAAACTTTTCTTCTTATAAAA i otoGar3.GL873528 I 723 C 0 s mm10.chr16 78115521 114 + 98207768 AGAAAGCCAATCTCCATTTCTGCAG---AATTC-----AATTTGCTTACTCGGTTTATT---TCAACGGCACTTTGAAGAAAGTGAGCACCACCAGTAGCCTTGGAAACCTCATTCCTTCTAGGA i mm10.chr16 C 0 I 1 s canFam3.chr31 13818607 125 + 39895921 aaaaagatggcctcccttactggaaaataataaacttcactttgcttaaccaacatatcatttcagtggtcttttcaggaagttggcCATCAGTAATGGCCACTGAAACTTTTCTTTCTGTAAGA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=1629191.000000 s hg38.chr21_KI270874v1_alt 63165 269 + 166743 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCT--TTCT-------AGAAAAG----ATTCTGATATGGAATATTGCtg-atactcagactactgctatttctgtgatcaggaaactgtcctttc----------------------------------------------------------------tctctgacccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaactgta--ag----------acta---tttaagcttgcaggt--------------------------------------------------------------------------aaggtaaaatcttagacccttcacagttcttgataATCTATTATATTAGAAAACAGGAATTAAAAATTTCTAGGTAATTTCATATGAGTGATTC s panTro5.chr21 3687684 269 + 33445071 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCT--TTCT-------AGAAATG----ATTCTGATATGGAATATtgctg-atactcagactactgctatttctgtgatcaggaaactgtcctttc----------------------------------------------------------------tctctgacccagg------------------------------------------------------------------------------------------------agtc---------------------taatacctact---------gatg------------aaactgta--ag----------acta---tttaagcttgcaggt--------------------------------------------------------------------------aaggtaaaatcatagacccttcacagttcttgataATCTACTATATTAGAAAACAGGAATTAAAAATTTCTAGGTAATTTCATATGAGTGATTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314586 269 + 46275980 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCT--TTCT-------AGAAATG----ATTCTGATATGGAATATtgctg-atactcagactactgctatttctgtgatcaggaaactgtcctttc----------------------------------------------------------------tctctgacccagg------------------------------------------------------------------------------------------------agtc---------------------taatacctact---------gatg------------aaactgta--ag----------acta---tttaagcttgcaggt--------------------------------------------------------------------------aaggtaaaatcatagacccttcacagttcttgataATCTACTATATTAGAAAACAGGAATTAAAAATTTCTAGGTAATTTCATATGAGTGATTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253613 268 - 13858734 CTCCAA-AATGGTAGCCCTTC---------T-CCC--------TTGACCTAGCT--TTCT-------AGAAATG----ATTCTGATTTGGAATGTtgctg-atactcagactactgctatttctgtgagcaggaaactgtcctttc----------------------------------------------------------------tttctgacccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaactgta--ag----------acta---tttaagcttgcaggt--------------------------------------------------------------------------aaggtaaaatcttagacccttcacagttcttgataATCTATTATATTAGAAAACAGGAATTAAAAATTTCTAGGTAATTTCATATGAGTGATTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4438751 269 + 32716333 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TTTACCTAGCT--TTAT-------ATAAATG----ATTCTGATATGGAATATtgctg-atactcagactactgctatttctgtgagcaggaaactgtcctttc----------------------------------------------------------------tctctgacccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gacg------------aaactgta--ag----------acta---tttaagcttgcaagt--------------------------------------------------------------------------aaggtaaaatcttagacccttcacagttcttgataATCTATTATATTCGAAAACAGGAATTAAAAATTTCTAGGTCATTTCATATGAGTGATAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390403 268 - 185818997 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCT--TTCT-------AGAAATG----ATTCTGACATGGAATATtgcta-atactcagacgactgctatttctgtgggcaggaaactgtcctttc----------------------------------------------------------------tctctga-ccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaaccgta--ag----------acta---tttaagcttgtgagt--------------------------------------------------------------------------aaggtaaaatcttagacccttcacagttcttgaTCATCTGTTATATTAGAAAACAGGAACTAAAAATTTCTAAGTGATTTCATATGAGTGATAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216516 268 - 192294377 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCT--TTCT-------AGAAATG----ATTCTGACATGGAATATtgcta-atactcagacgactgttatttctgtgggcaggaaactgtcctttc----------------------------------------------------------------tctctga-ccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaaccata--ag----------acta---tttaagcttgcgagt--------------------------------------------------------------------------aaggtaaaatcttagacccttcacagttcttgaTCATCTGTTATATTAGAAAACAGGAACTAAAAATTTCTAAGTGATTTCATATGAGTGATAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8696901 268 + 9440265 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCT--TTCT-------AGAAATG----ATTCTGACATGGAATATtgcta-atactcagacgactgctatttctgtgggcaggaaactgtcctttc----------------------------------------------------------------tctctga-ccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaaccata--ag----------acta---tttaagcttgcgagt--------------------------------------------------------------------------aaggtaaaatattagacccttcacagttcttgaTCATCTCTTATATTAGAAAACAGGAACTAAAAATTTCTAAGTGATTTCATATGAGTGATAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426327 257 + 21915920 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TCGACCTAGCT--TTCT-------AGAAATG----ATTCTGACATGGAATATt------------gatgactgctatttctgtgggcaggaaactgtcctttc----------------------------------------------------------------tctctga-ccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaaccgta--ag----------acta---tttaagcttgtgagt--------------------------------------------------------------------------aaggtaaaatcttagacccttcacagttcttgaTCATCTGTTATATTAGAAAACAGGAACTAAAAATTTCTAAGTGATTTCATATGAGTGATAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001115 268 - 90373283 TTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TTGACCTAGCT--TTCT-------AGAAATG----ATTctgacatgaaatattgctg-atactcagatgactgctatttctgtgcgcaggaaactgtcctttc----------------------------------------------------------------tctctga-ccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaaccata--ag----------acta---ttttagcttgcaagt--------------------------------------------------------------------------aaggtaaaatcttagacccttcacatttcttgaTCATCTATTATATTAGAAAACAGGAATTAAAAATTTCTAAGTAATTTTATATGAGTGATAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180539 268 + 4234846 CTCCAA-AAGGGTAGCCCTTC---------TCCCC--------TCAATCTAGCT--TTCT-------AGAAATG----ATTCTGACATGGAATATtgctc-atactcagatgactgctatttctgtgggcaggaaactgtcctttc----------------------------------------------------------------tctctga-ctagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaaccgta--ag----------acta---tgtaagcttgcgagt--------------------------------------------------------------------------aaggtaaaatcttagacccttcacagttcttgaTCATCTGTTATATTAGAAAACAGGAACTAAAAATTTCTCAGTGATTTCATATGAGTGATAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184661 268 - 13750039 CTCCAA-AAGGGTAGCCCTTC---------TTCCC--------TTGACCTAGCT--TTCT-------AGAAATG----ATTCTGACATGGAATATtgctg-atactcagacgactgctatttctgtgggcaggaaactgtcctttc----------------------------------------------------------------tctctga-ccagg------------------------------------------------------------------------------------------------agtc---------------------tagtacctact---------gatg------------aaaccgta--ag----------acta---tttaagcttgcgagt--------------------------------------------------------------------------aaggtaaaatgttagacccttcacagttcttgaTCATCTACTATATTAGAAAACAGGAATTAAAAATTTCTAAGTAATTTCATATGAGTGATAC i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20740015 537 - 38779656 TTCTGATAAGGGTAGCGATTC---------CTATA--------TTGACTAATTTGATTAC-------AGAAATT----ATTCTGACATACAATACTGCTGAATACTCTGCCCATTGCTATTTCTGGGGGCAATATACTGTTCTTTCCagtcttgcatcttatgaaaacatccacaatactgcaacacactaacttctaaacagggtgaaatcttagaccccgggtggtgcctgtggctcagtaagtagggcagcaggggccccatatactaagggtgacaggttcaaacccagccctggccaaattgcaacaaaaaaatagtcaggcattgtgcagggtgcctgtagtcccagctacccaggaggctg------------aggcaaga--ga----------atga---cctaagcccaggagttggaggttgctgtgagctctgacgccatggcactctaccaagggtgataaagtgagactttgtctcaaaaaaaaaaaaaaaaatcttagaccctttgcagctcttgacaACCTGTTAAATTAGAAAATAGAAATAAAGGATTTCTAGGTAATAGCATATGTATTATAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78115636 270 + 98207768 TCTTAT-CAGGATAAGTTTCCGAATATTGACCAGT--------TTGACCTGGTT--TCCCCCCCCAAAAAAATATAATATTCtgatatgttatattgtta-gtgag----------------ctgtgaacaataatctaccctttc------------------------------------------------------------------tctgacccagg------------------------------------------------------------------------------------------------agtc---------------------t-gtgtcttca---------gatgactttaaaaaaaaaattaca--aagttatagtctacca---tcttagcttgcatga--------------------------------------------------------------------------agcataaaaccttaggccctccatagctcttgacaAGCTGTTACATTAGAAATGTAGAA----------------------ATGTGTGTGATAA i mm10.chr16 I 1 C 0 s canFam3.chr31 13818732 280 + 39895921 TTCAGATAAGGGTAGCCCTTC---------CCATCTAGCCAATTTGATCTAGC---TGCC-------AGAATTG----ATTCTGATATGGGATGTGGatg-atcctcctgccactgctatttctgtgagtaataa---------------------------------------------------------------------------actttgacccagg------------------------------------------------------------------------------------------------agtc---------------------ttgcatcttct---------gacagcatttaca---aaactgtggtag----------gctaacttcttatcttgcaagc--------------------------------------------------------------------------agggtaaaatcttacaattgtcacagttcttgacaACCTATTATATTAGAGAGTAGAAATAAAGGATTTCTAGATAACGACGGGTGAATAATCC i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1081564 2417 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=664858.000000 s hg38.chr21_KI270874v1_alt 63434 80 + 166743 TACTCTTAGGTGTCTATTTTATATGAAAAGACAAAATAGAAAATGGATTTGACACAAATCCATTA---AGCTTAACTTTTAGT s panTro5.chr21 3687953 80 + 33445071 TACTCTTAGGTGGCTATTTTATATGAAAAGACAAAATAGAAAATGGATTTGACACAAATCCATTA---AGCTTAACTTTTAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314855 80 + 46275980 TACTCTTAGGTGGCTATTTTATATGAAAAGACAAAATAGAAAATGGATTTGACACAAATCCATTA---AGCTTAACTTTTAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253881 80 - 13858734 TACTCTTAGGTGGCTATTTTATATGAAAAGACAAAATAGAAAATGGATTTGACACAAATCCATTA---AGCTTAACTTTTAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439020 80 + 32716333 TACTCTTAGGTGGCTCTTTTATATGAAAGGACAAAATAGAAAATGTATTTGACACAAATCCATTA---AGCTTACCTTTTAGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390671 80 - 185818997 TACTCTTAGGTGGCTCTTTAATATGAAAGGACAAAATAGAAAATGGATTTGACACAATTCCATTA---AGCTTAACTTTTACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216784 80 - 192294377 TACTCTTAGGTGGCTCTTTAATATGAAAGGACAAAATAGAAAATGGATTTGACACAATTCCATTA---AGCTTAACTTTTACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697169 80 + 9440265 TACTCTTAGGTGGCTCTTTAATATGAAAGGACAAAATAGAAAATGGATTTGACACAATTCCATTA---AGCTTAACTTTTACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426584 80 + 21915920 TACTCTTAGGTGGCTCTTTAATATGAAAGGACAAAATAGAAAATGGATTTGACACAATTCCATTA---AGCTTAACTTTTACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001383 80 - 90373283 TACTCTTAGGTGGCTCTTTTATATGAAAGGACAAAACAGAAAATGGATTTGACACAATTCCATTA---AGCTTAACTTTTACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180807 80 + 4234846 TACTCTTAGGTGGCTCTTTAATATGAAAGGACAAAATAGAAAATGGATTTGACACAATTCCACTA---AGCTTAACTTTTACT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 184929 80 - 13750039 TACTCTTAGGTGGCTCTTTTATATGAAAGGACAAAACAGGAAATGGATTTCACACAATTCCATTA---AGCTTAACTTTTAGT i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1083981 80 + 2694913 TACTCTTAGGTGGCTCTTTTATATAAAAGGGCAAAATAGACAACAGATTTGATGAAAATCCATTA---ACCATAACTTCTAGT i proCoq1.NW_012144079v1 I 2417 C 0 s otoGar3.GL873528 20740552 79 - 38779656 CACTCCTATGTGGCACTTTTATGTGAAAGGGCAAAATAGAAAGCAGACTTAACAAAAACCC-TTC---ATCTTTACTTCTAGT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78115906 81 + 98207768 TATTCATAACTGGTA--TTTATCAGGAAGGGCCAAAGAGAAAACTGGCTTGAAAAATATCCATTAATCAGCCTAACTTTTAGT i mm10.chr16 C 0 I 538 s canFam3.chr31 13819012 77 + 39895921 ---TCTGAGGTGGCTCTTTTATAAGAAAGAACAAAATAGAAAGTGAAATTGACAAAAATCCATTA---AACTTAACTTTTAGT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=3291.000000 s hg38.chr21_KI270874v1_alt 63514 1 + 166743 A s panTro5.chr21 3688033 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314935 1 + 46275980 A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253961 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439100 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390751 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216864 1 - 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697249 1 + 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426664 1 + 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001463 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180887 1 + 4234846 G i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185009 1 - 13750039 G i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1084061 1 + 2694913 A i proCoq1.NW_012144079v1 C 0 I 308 s otoGar3.GL873528 20740631 1 - 38779656 G i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13819089 1 + 39895921 G i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=64897.000000 s hg38.chr21_KI270874v1_alt 63515 18 + 166743 GCGTTAGATCTTTTAA-TT-- s panTro5.chr21 3688034 19 + 33445071 GCGTTAGATCTTTTAATTT-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314936 17 + 46275980 GCGTTAGATCTTTTAA--T-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253962 18 - 13858734 GCTTTAGATCTTTTAA-TT-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439101 18 + 32716333 GAGTTAGATCTTTTAA-TT-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390752 16 - 185818997 GAGTCAGATCTTTTAA----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216865 16 - 192294377 GAGTCAGATCTTTTAA----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697250 16 + 9440265 TAGTCAGATCTTTTAA----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426665 16 + 21915920 GAGTCAGATCTTTTAA----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001464 16 - 90373283 GAGTCAGATCTTTTAA----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180888 16 + 4234846 GAGTCAGATCTTTTAA----- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185010 16 - 13750039 GAGTCAGATCTTTTAA----- i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20740632 16 - 38779656 AAGTTAGACATTCGAT----- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13819090 18 + 39895921 GAATTGGATATTTGAT---TT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1084062 308 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=182165.000000 s hg38.chr21_KI270874v1_alt 63533 35 + 166743 TTTTTTATCCTATGATTCCATTTA-------------------------------------------------------------------------------TCTTGAGCTTA s panTro5.chr21 3688053 35 + 33445071 TTTTTTATCCTATGATTCCATTTA-------------------------------------------------------------------------------TCTTGAGCTTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314953 35 + 46275980 TTTTTTATCCTATGATTCCATTTA-------------------------------------------------------------------------------TCTTGAGCTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3253980 35 - 13858734 TTTTTTATCCTATGATTCCATTTA-------------------------------------------------------------------------------TCTTGAGCTTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439119 35 + 32716333 TTTTTTATCCTATGATTCCATTTA-------------------------------------------------------------------------------TCTTGAGCTTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390768 35 - 185818997 TTTTTTATCCTATGATTCCATTTC-------------------------------------------------------------------------------TCTTGTGCTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216881 35 - 192294377 TTTTTTATCCTATGATTCCATTTC-------------------------------------------------------------------------------TCTTGTGCTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697266 34 + 9440265 -TTTTTATCCTATGATTCCATTTC-------------------------------------------------------------------------------TCTTGTGCTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426681 35 + 21915920 TTTTTTATCCTATGATTCCATTTC-------------------------------------------------------------------------------TCTTGTGCTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001480 35 - 90373283 TTTTTTATCCTATGATTCCATTTC-------------------------------------------------------------------------------TCTTGAGCTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180904 35 + 4234846 TTTTTTATCCTATGATTCCATTTC-------------------------------------------------------------------------------TCTTGTGCTTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185026 35 - 13750039 TTTTTTATCCTATGATTCCATTTC-------------------------------------------------------------------------------TCCTGTGCTTA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20740648 111 - 38779656 CTTTttg---tatgattccatttacacgagatgttcagaataggcaaattcaaagggaaaattgttactagaagttggcgaagggggaatggagattgactggtgttgagttaa i otoGar3.GL873528 C 0 I 159 e proCoq1.NW_012144079v1 1084062 308 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=79362.000000 s hg38.chr21_KI270874v1_alt 63568 15 + 166743 TCATTCATTTGGTCC s panTro5.chr21 3688088 15 + 33445071 TCATTCATTTGGTCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17314988 15 + 46275980 TCATTCATTTGGTCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254015 15 - 13858734 TCATTCATTTGGTCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439154 13 + 32716333 TCATTCATTTGGT-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390803 15 - 185818997 TCATGCATTTGTTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216916 15 - 192294377 TCATGCATTTGTTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697300 15 + 9440265 TCATGCATTTGTTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426716 15 + 21915920 TCATGCATTTGGTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001515 15 - 90373283 TCATGCATTTGGTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180939 15 + 4234846 TCATGCATTTGGTCC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185061 15 - 13750039 TCATGCATTTGGTCC i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20740918 15 - 38779656 TTACTAACCTGGTCC i otoGar3.GL873528 I 159 I 1 e proCoq1.NW_012144079v1 1084062 308 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19182627 2443 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=993593.000000 s hg38.chr21_KI270874v1_alt 63583 130 + 166743 TTGGCTTTTGGTCTTTGTTTAGGGGCTGC-AGAGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCAGGTGGTAGTCAGGTTTTTAGGTAGATTGCTGGACTCAGTATTATTCTGCAG s panTro5.chr21 3688103 130 + 33445071 TTGGCTTTTGGTCTTTGTTTAAGGGCTGC-AGAGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCAGGTGGTAGTCAGGTTTTTAGATAGAGTGCTGGACTCAGTATTATTCTGCAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315003 130 + 46275980 TTGGCTTTTGGTCTTTGTTTAGGGGCTGC-AGAGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCAGGTGGTAGTCAGGTTTTTAGATAGAGTGCTGGACTCAGTATTATTCTGCAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254030 130 - 13858734 TTGGCTTTTGGTCTTTGTTTAGGGGCTGC-AGAGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATAGTCCAAAGACCAGGTGGTAGTCAGGTTTTTAGGTAGAGTGCTGGACTCAGTATTATTCTGCAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439167 126 + 32716333 ----CTTTTGGTCTTTGTTTAGGGGCTAC-AGGGGCTTCGTTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGATCAGGTGGTAGTCAGGTTTTTAGGGAGAGTGCTGGACTCAGTATTATTCTGCAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390818 126 - 185818997 TTGGCTTTTAATCTTTGTTTAGGGGCTGC-AGCGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGCTCTGGAC----TATTCTTCTGCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162216931 126 - 192294377 TTGGCTTTTAATCTTTGTTTAGGGGCTGC-AGCGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGCTCTGGAC----TATTCTTCTGCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697315 126 + 9440265 TTGGCTTTTAATCTTTGTTTAGGGGCCGC-AGCGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGCTCTGGAC----TATTCTTCTGCAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426731 130 + 21915920 TTGGCTTTTAATCTTTGTTTAGGGGCTGC-AGCGGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGTGCTGGACTCAGTATTATTCTGCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001530 130 - 90373283 TTGGCTTTTAATCTTTGTTTAGGGGCTGC-AGAGGCTTCACTGGTTCATTTCTTTCCTTGATGACATTGTCCATAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGCACTGGACTCAGTATTATTCTGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2180954 130 + 4234846 TTGGCTTTTAATCTTTGTTTAGGGGCTGC-AGAGGCTTCACTGGTTCATTGCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGCGCTGGACTCAGTATTATTCTGCAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185076 130 - 13750039 TTGGCTTTTTGTCTTTGTTTAGGGGCTGC-AGAAGCTTCACTGGTTCATTTCTTTCCTTGGTGACATTGTCCAAAGACCATGTGGTAGTCAGGTTTTTAGGTAGAGTGCTGGACTCAGTATTATTCTGCAG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19185070 131 + 47401472 TTGGCTTTTGATCTTTGGTTAGGGGCTGCAAGAGGCTTCACTGCTTCATTCCTTTCTTCAGTGTCATTGTCAGATGACCATGTGGGAATCAGGTTTTCAGGTTGAGCACTGGACTTAGTGTTATGCTGCAG i micMur3.chr31 I 2443 I 175 s proCoq1.NW_012144079v1 1084370 130 + 2694913 TTGGCTTTTGATCTTTGTTTAGGGGCTGC-AGAGGCTTCACTGGTTCATTCCTTTCTTCAGTGACGTTGTCAGAGACCCATGTAGGGACCAGGTTTTCAGCCTGAGCAGTGGACTTAGTGTTATGCTGCAG i proCoq1.NW_012144079v1 I 308 I 17 s otoGar3.GL873528 20740934 128 - 38779656 AAGGTTTTTGAACTTTG-TTAGGGGCTTC-AGAGGCTTCAGTGGTTCATTCCTTTTCTCAGTGACACTGACAGAGGATCATCTGGGAATAGGGTCTATGAGTTGAGCACTGGACTCAGCGTCAC-CTGCAC i otoGar3.GL873528 I 1 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=47772.000000 s hg38.chr21_KI270874v1_alt 63713 8 + 166743 -------CCCATAAG s panTro5.chr21 3688233 8 + 33445071 -------CCCATAAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315133 8 + 46275980 -------CCCATAAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254160 8 - 13858734 -------CCCATAAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439293 8 + 32716333 -------CCCATAAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390944 8 - 185818997 -------CCCATAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217057 8 - 192294377 -------CCCATAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697441 8 + 9440265 -------CCCATAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426861 8 + 21915920 -------CCCATAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001660 8 - 90373283 -------CCCATAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181084 8 + 4234846 -------CCCATAAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185206 8 - 13750039 -------CCCATAAG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20741062 15 - 38779656 CTTCTCCTCCTTCAC i otoGar3.GL873528 C 0 I 2 e proCoq1.NW_012144079v1 1084500 17 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19185201 175 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=948137.000000 s hg38.chr21_KI270874v1_alt 63721 152 + 166743 AAGAAATACTGTTTTTATCTCCTAGGTCACTAAAGGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTACCCTCCTGATTGTGGCTAGTGACCACACAG s panTro5.chr21 3688241 152 + 33445071 AAGAAATACTGTTTTTATCTCCTAGGTCACTAAACGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTACCCTCCTGATTGTGGCTAGTGACCACACAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315141 152 + 46275980 AAGAAATGCTGTTTTTATCTCCTAGGTCACTAAACGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTACCCTCCTGATTGTGGCTAGTGACCACACAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254168 152 - 13858734 AAGAAATACTGTTTTTATCTCCTAGGTCACTAAAGGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCACTTAGTTCACTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTACCCTCCTGATTGTGGCTAGTGACCACACAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439301 152 + 32716333 AAGAAATATTGTTTTTATCTCCCAGGTCACTAAAGGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTACCCTCCTGATTGTGGCTAGTGACCACACAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155390952 141 - 185818997 AAGAAATATTGTTTTCATTTCCTAGCTCGCTAAAGGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCATTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTATCCTGCTAATTGTGGCT-----------AG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217065 141 - 192294377 AAGAAATATTGTTTTCATTTCCTAGCTCGCTAAAGGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCATTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTATCCTGCTAATTGTGGCT-----------AG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697449 141 + 9440265 AAGAAATATTGTTTTCATTTCCTAGCTCGCTAAAGGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCATTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTATCCTGCTAATTGTGGCT-----------AG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8426869 141 + 21915920 AAGAAATACTGTTTTCATTTCCTAGCTCGCTAAAGGCATCTAAGTGTCTTGGTTGATTCCTC-TGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAAGATTTATCCTGCTAATTGTGGCT-----------AG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001668 133 - 90373283 AAGAAATATTGTTTTCATTTCCTAGCTCACTAAAGGCA--------TCTTGGTTGATTCTTC-TGAACTAAGCCACTTAGCTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAATATTTATCCTGCTAATTGTGGCT-----------AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181092 141 + 4234846 AAGAAATATTGTTTTCATTTCCTAGCTCGCTAAAGGCATCTAAGTGTCTTGGTTGATTCCTC-TGAACTAAGCCACTTAGTTCATTGAGTCTCTCCTT-TCTGCAGGTAAGATGTCAAGATTTATCCTGCTAATTGTGGCT-----------AG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185214 141 - 13750039 AAGAAATATTGTTTTCATTTCCTAGCTCGCTAAAAGCATCTAAGTGTCTTGGTTGATTCTTC-TGAACTAAGCCACTTAGTTCATCGAATGTCTCCTT-TCTGCAGGTAAGATGTCAATATTCATCCCGCTAATTGTGGCT-----------AG i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1084517 154 + 2694913 GAGAAATACTGCATTTACCTTCTAGCCCATTAGAGCCGTCTAAGTGTCTTGGTTGATTCTCCTTTAACTAAACCACTTAGTTCACTGAATCCTTCCTTATCTGAAGGTAAGATGTCAATATTTACCCTACTTGTTGTGGCCAATGACTCTGTGA i proCoq1.NW_012144079v1 I 17 C 0 s otoGar3.GL873528 20741079 152 - 38779656 GAGAAACCTTGCA-TTGCCTTCTAGCTCCTTCTAGTCATCTCGATGTCTTTGATGACTCTCC-TGAATTAAACCACTTAATTCGTTGAATCCTTCCTTACCTGAAAGTAAGATGTCAACATTTACCCTACTTGTTCTGGCCAGTAACTCGGCAA i otoGar3.GL873528 I 2 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19185201 175 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=482921.000000 s hg38.chr21_KI270874v1_alt 63873 61 + 166743 TATTACTCATGCATGGTTTCTAGGCATGGCCTTTCAGAC---TGGCAGGTAACTTCAAGGGACC s panTro5.chr21 3688393 61 + 33445071 TATTACTCATGCATGGTTTCTAGGCATGGCCTTTCAGAC---TGGCAGGTAACTTCAAGGGACC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315293 61 + 46275980 TATTACTCATGCATGGTTTCTAGGCATGGCCTTTCAGAC---TGGCAGGTAACTTCAAGGGACC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254320 61 - 13858734 TATTACTCATGCATGGTTTCTAGGCATGGCCTTTCAGAC---TGGCAGGTAACTTCAAGGGACC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439453 61 + 32716333 TATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGAC---TGGCAGGTAACTTCAAGGGACC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391093 61 - 185818997 TATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGAC---TGGTAGGTAACTTCAAGAGATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217206 61 - 192294377 TATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGAC---TGGTAGGTAACTTCAAGAGATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697590 61 + 9440265 TATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGAC---TGGTAGGTAACTTCAAGAGATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427010 61 + 21915920 TATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGAC---TGGTAGGTAACTTCAAGACACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001801 61 - 90373283 TATTACTCATGCATAGTTTCCAGGCATGGCCTTTCAGAC---TGGTAGGTAACTTCAAGAGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181233 61 + 4234846 TATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGAC---TGGTAGGTAACTTCAAGACACA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185355 61 - 13750039 TATTACTCATGCATGGTTTCCAGGCATGGCCTTTCAGAC---TGGTAGGTAACTTCAAGAGACA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19185376 61 + 47401472 TATTGCTCATGTCTGGTTTTCAGGTGTGGCCTTTCAGAC---TAGTAGGTGACTTCAAGGGACC i micMur3.chr31 I 175 I 89 s proCoq1.NW_012144079v1 1084671 61 + 2694913 TATTTCTCATGTCTGGTTTTCAGGTGTGGTCTTTCAGAC---TAGTAGGTGACTTCAAGGAACC i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20741231 51 - 38779656 TATTGCTCAT-------------GTGTGGCCTTTTAGACCAGCAGCAGCTGATTTCAAGGGACG i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=592929.000000 s hg38.chr21_KI270874v1_alt 63934 94 + 166743 CATGACTATGGCTTTTGCTTCGAACAAACATTTTTCTTCATTCATTACATACATCCCACAGCCCTT-GAACAGTGTGATTGGGGGTGGGTCAC-TC s panTro5.chr21 3688454 95 + 33445071 CATGACTATGGCTTTTGCTTCGAACAAACATTTTTCTTCATTCATTACATACATCCCACAGCCCTT-GAACAGTGTGATTGGGGGTGGGTCACTTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315354 95 + 46275980 CATGACTATGGCTTTTGCTTCGAACAAACATTTTTCTTCATTCATTACATACATCCCACAGCCCTT-GAACAGTGTGATTGGGGGTGGGTCACTTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254381 94 - 13858734 CATGACTATGGCTTTTGCTTCAAACAAACAGTTTTCTTCATTCATTACACACATCCCACAGCCCTT-GAACAGTGTGGTTGGGGGTGGGTCAC-TC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439514 95 + 32716333 TATGACTATGGCTTTTTCCTCAAACAAACATTTTTCTTCATTCATTACATACATCCCACTGCCCTT-GAACAGTGTGGTTGGGGGTGGGTCACTTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391154 95 - 185818997 AATGACCATGGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTACATATGTCCCAGAGCCCTT-GAAGAGTGTGGCTGGCAGTGGGTCACTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217267 95 - 192294377 AATGACCATGGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTACATATGTCCCAGAGCCCTT-GAAGAGTGTGGCTGGCAGTGGGTCACTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697651 95 + 9440265 AATGACCATGGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTACATATGTCCCAGAGCCCTT-GAAGAGTGTGGCTGGCAGTGGGTCACTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427071 95 + 21915920 AATGACCATAGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTACATATGTCCCAGAGCCCTT-GAAGAGTGTGGCTGGCAGTGGGTCACTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001862 95 - 90373283 AATGGCCATGGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTATATATGTCCCAGAGCCCTT-GAAGAGTGTGGCTGGCAGTGGGTCACTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181294 95 + 4234846 AATGACCATGGCTTTTTCCTGGGACAAACATTTTTCTTCATTCATTACATATGTCCCAGAGCCCTT-GAAGAGTGTGGCTGGCAGTGGGTCACTTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185416 95 - 13750039 AATGACCATGGCTTTTTCCTGGGACAAACACTTTTCTTCATTCATTACATATGTCCCAGAGCCCTT-GAAGAGTGTGGCTGGCAGTGGGTCACTTC i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1084732 95 + 2694913 AATGACTATGAGTTTCTCCTGGGACCAACATTTGTCTTCATCCATCACAACTATGTCAGAGCCCTCAGAAGAGTGTGGTTGAGGGTGGATCACTT- i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20741282 95 - 38779656 AATGACCGTGAGTTTCTCCTAAGGCCAACATTTGTCTTCACCCATCACATACGTCTTCGAGCCCTAAGAAGACATTGGTAGGAGGTGGGTCACCT- i otoGar3.GL873528 C 0 I 1 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19185437 89 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=867210.000000 s hg38.chr21_KI270874v1_alt 64028 110 + 166743 ATGATTTCATTCTGTCTTTCTAGAAACCACTATAACAACAGATTTGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAAACTTTGTCTTTGTAGCCTTCAAAAACA s panTro5.chr21 3688549 110 + 33445071 ATGATTTCATTCTGTCTTTCTAGAAACCACTATAACAACAGATTTGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAAAGTTTGTCTTTGTAGCCTTCAAAAACA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315449 110 + 46275980 ATGATTTCATTCTGTCTTTCTAGAAACCACTATAACAACAGATTTGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAAAGTTTGTCTTTGTAGCCTTCAAAAACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254475 110 - 13858734 ATGATTTCATTCTGTCTTTCTAGAAACCACTATAACAACAGATTTGGATTTAGAGTAATCA-CTTTTAATGTCATTTTTGGAAAAGTTTGTCTTTGTAGCCTTCAAAAACA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439609 110 + 32716333 ATGATTTCATTCTGTCTTTCTAGAAACCACTATAACAATAGATTTGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAAAGTTTGTCTTTGTAGCCTTCAAAAACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391249 108 - 185818997 ATGATTTCATCCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAATGTTTGTCTTTGTAGCCTTCAAAAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217362 108 - 192294377 ATGATTTCATTCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAATGTTTGTCTTTGTAGCCTTCAAAAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697746 108 + 9440265 ATGATTTCATTCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAATGTTTGTCTCTGTAGCCTTCAAAAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427166 108 + 21915920 ATTATTTCATTCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAATGTTTGTCTTTGTAGCCTTCAAAAACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15001957 108 - 90373283 ATGATTTCATTCTGTCTTTCTAGAAACTTCTATAACA--AGATATGGATTTAGAGTAATCA-CTTTTAATGTTATTTTTGGAAATGTTTGTCTTTGTAGCCTTCAAAAACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181389 108 + 4234846 ATGATTTCATTCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAGGAATCA-CTTTTAATGTTATTTTTGGAAATATTTGTCTTTGTAGCCTTCAAAAACA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185511 108 - 13750039 ATGATTTCATTCTGTCTTTCTAGAAACTACTATAACA--AGATATGGATTTAGAATAATCA-CTTTTAATGTTATTTTTGGAAATGTTTGTCTTTGTAACCTTCAAAAACA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19185526 110 + 47401472 ATGATTTGATTCTGCCCTTCTGGAAATCACTGTAGCCCCAGGCTTAGATTTAAAGTCACCA-TTTTTAATGTTATTTTTGGAGATTTTTGTCTTTATGGCCTCCAAAAACA i micMur3.chr31 I 89 C 0 s proCoq1.NW_012144079v1 1084828 110 + 2694913 ATGATTTGATTCTGCCTTTCTGGAAACCACTATGGCAATAGGCTTAGATTTATAGTCACCA-TTTTTAATGTTATTTTTGGAGATTTTTGCCTTCGTGGCCTCCAAAAACA i proCoq1.NW_012144079v1 I 1 I 85 s otoGar3.GL873528 20741378 110 - 38779656 ATGATTTGATTCTGCCTTTCTGGAAACTACTCTAGCAACAGGTTTA-ATTTAGAGTTAACATTTTTTTATGGTATTTTTAGAGATTTTTGTCTTTGTGGCCTCCAAAAATA i otoGar3.GL873528 I 1 I 3 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=17381.000000 s hg38.chr21_KI270874v1_alt 64138 2 + 166743 AG s panTro5.chr21 3688659 2 + 33445071 AG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315559 2 + 46275980 AG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254585 2 - 13858734 AG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439719 2 + 32716333 AG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391357 2 - 185818997 AG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217470 2 - 192294377 AG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697854 2 + 9440265 AG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427274 2 + 21915920 AG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002065 2 - 90373283 AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181497 2 + 4234846 AG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185619 2 - 13750039 AG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19185636 2 + 47401472 AG i micMur3.chr31 C 0 I 84 s otoGar3.GL873528 20741491 2 - 38779656 AG i otoGar3.GL873528 I 3 C 0 e proCoq1.NW_012144079v1 1084938 85 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=492613.000000 s hg38.chr21_KI270874v1_alt 64140 82 + 166743 ATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTCCGTTCTGCACTGTTATTA s panTro5.chr21 3688661 82 + 33445071 ATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAAGGTTTTTCTTCAGGACTTCCGTTCTGCACTGTTATTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315561 82 + 46275980 ATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTTTTTTTTCAGGACTTCCGTTCTGCACTGTTATTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254587 82 - 13858734 ATTTGGTGCTTTACATTAAGCTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTCCGTTCTGCAGTGTTATTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439721 82 + 32716333 ATTTGGTGCTTTACATTAGGCTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGAACTTCTGTTCTGCACTGTTATTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391359 82 - 185818997 ATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTTTGTTCTGCACTGTTTTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217472 82 - 192294377 ATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTTTGTTCTGCACTGTTTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697856 82 + 9440265 ATTTGGTGCTTTACATTAGACTGTTTTGGGATGGTCCTCACAGAGGGTCTTTCTTCAGGACTTTTGTTCTGCACTGTTTTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427276 82 + 21915920 ATTTGGTGCTTTACATTAGACTGTTTTGGGGTGCTCCTCACAGAGGGTCTTTCTTCAGGACTTTTGTTCTGCACTGTTTTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002067 78 - 90373283 ATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGG----TCTTCAGGACTTTTGTTCTGCACTGTTTTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181499 82 + 4234846 ATTTGGTGCTTTACATTAGACTGTTTTGGGATGCTCCTCACAGAGGGTCTTTCTTCAGGACTTTTGTTCTGCACTGTTTTCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185621 82 - 13750039 ATTTGGTGCTTTACATTAGACTGTTTTGGGATCCTCCTCACAGAGGGTCTTTCTTCAGGACTTCTGTTCTGCACTGTTTTTA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20741493 76 - 38779656 ATTAAGCAGTTTATGTAAAGCTGC----AGATGGTTGTAACAG--GGTCTTTCTTTAGGCCTCTTGTTCAGCATTATTCTTA i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1084938 85 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19185638 84 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=8281.000000 s hg38.chr21_KI270874v1_alt 64222 1 + 166743 T s panTro5.chr21 3688743 1 + 33445071 T i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315643 1 + 46275980 T i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254669 1 - 13858734 T i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439803 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391441 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217554 1 - 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697938 1 + 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427358 1 + 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002145 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181581 1 + 4234846 T i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185703 1 - 13750039 T i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1085023 1 + 2694913 T i proCoq1.NW_012144079v1 I 85 C 0 s otoGar3.GL873528 20741569 1 - 38779656 T i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19185638 84 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=2209140.000000 s hg38.chr21_KI270874v1_alt 64223 280 + 166743 CAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATTTCATAAACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGTCCAAACATCAGACTT------ATAGCTC-TAGTGTTTGTTTGAGAATAATTGAGGACTCATGTAGTAAGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCTATAGTGATCCAGGGTGGGGCACTGCCCTCAGACACTTGATTT s panTro5.chr21 3688744 280 + 33445071 CAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATTTCATAAACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGTCCAAACATCAGACTT------ATAGCTC-TAGTGTTTGTTTGAGAATAATTGAGGACTCATGTAGTAAGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCTATAGTGATCCAGGCTGGGGCACTGCCCTCAGACACTTGATTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315644 280 + 46275980 CAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATTTCATAAACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGTCCAAACATCAGACTT------ATAGCTC-TAGTGTTTGTTTGAGAATAATTGAGGACTCATGTAGTAAGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCTATAGTGATCCAGGCTGGGGCACTGCCCTCAGACACTTGATTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254670 279 - 13858734 CAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATTTCATAAACTAAAGAATTGGTAT-TTTTACATTGAAAGTACGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGTCCAAACATCAGACGT------ATAGCTC-TAGTGTTTGTTTGAGAATAATTGAGGACTCATGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCTATAGTGATCCAGGCT-GGGCACTGCCCTTAGACACTTGATTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4439804 276 + 32716333 CAGTTCTGCCAGCTCTGGGCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCGGTAATCTCATAAACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCGTTTCACAAACACAGCATCCCAGAGTCCAAACATCAGACTT------ATAGCTG-TAG----TGTTTGAGAGTAATTGAGGACTCATGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCCATAGTGATCCAGGCTGGGGCACTGCCCTCAGACACTTGATTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391442 280 - 185818997 CAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATACACTAAAGAATTGGTAC-TTTTACATTGAAAGTATGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTT------ATAGCTG-TAGTGTTTGTTTGAGAATAACTGAGGACTCACGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGGCATAGTGACCCAGGCTGGGGCGCTGTCCTCAGACACTTGATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217555 280 - 192294377 CAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATACACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTT------ATAGCTG-TAGTGTTTGTTTGAGAATAACTGAGGACTCACGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGGCATAGTGACCCAGGCTGGGGCGCTGTCCTCAGACACTTGATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8697939 280 + 9440265 CAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATACACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTT------ATAGCTG-TAGTGTTTGTTTGAGAATAACTGAGGACTCACGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGGCATAGTGACCCAGGCTGGGGCGCTGTCCTCAGACACTTGATTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427359 280 + 21915920 CAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAACAATCTCATACACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCACTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTT------ATAGCTG-CAGTGTTTGTTTGAGAATAACTGAGAACTCACGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGGCATAGTGACCCAGGCTGGGGCGCTGTCCTCAGACACTTGATTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002146 280 - 90373283 CAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATAAACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTT------ATAGCTG-TGGTGTTTGTTTGAGAATAACTGAGGACTCATGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCAGAGTTGGCATAGTGACCCAGGCTGAGGCGCCATCCTCAGATACTTGATTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181582 280 + 4234846 CAGTTCTGCCAGCTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATACACTAAAGAATTGGTAT-TTTTACATTGAAAGTATGCTTT-GGGTGACCATTTCACAAACACAGCATCCCAGAGCCCAAACATCAGACTT------AGAGCTG-TAGTGTTTGTTTGAGAATAACTGAGAACTCATGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGGCATAGTGACCCAGGCTGGGGCGCTGTCCTCAGACACTTGATTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185704 280 - 13750039 CAGTTCTGCCAGGTCTGGCCTATAATCTATTGGTATCTCTGGCAGCTTTTCTTCAATAATCTCATAAACTAAAGAATTCATAT-TTTTACATTTAAAGTATGCTTT-GGGTGACCATTTTACAAACACAGCATCCCAGAGCCCAAACATCAGACTT------ATAGCTG-TAGTGTTTGTTTGAGAATAACTGAGGACTCATGTAGTAGGGTGTGCCAGTGAGGGTACTAACCATGTCACAGTTGCCATAGTGACCTAGGCTGGCGCGCTGTCCTCAGACACTTGATTT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19185722 282 + 47401472 CAGTTCTGCCAGCTCTGCACTATAATCTACTGGTGTTGGTAGCAGCTTTTCTTCCATAATCTGATAAACAAAAGAATTGGTATTTTTTGCATTGAAAGCATGCTTCAGGGTGGCC-----ATAGACACAGCATTCCAAAGCCTAAATATCAGACTTATATTAATAATTG-TGG-GTTTGTTTGAGAACAATTCAAGGCTCATGTAGTAGGGCGTAACAATGAGGGTACTAGCCATGTCACAGTTGCCATGGTGATCTGGGCCAGGGTACTCCCACCAGATATTTGATTT i micMur3.chr31 I 84 C 0 s proCoq1.NW_012144079v1 1085024 283 + 2694913 CAGTTCTGCCAGCTCTGAGCTGTAACCTATTGGCACTGGTAGCAGCTTTTCTTCAATAACCTGATAAATAAAAGAATTGGTATGTTTTGCATTGAAAGCATGCTTTAGGGTGGCC-----ATAGACACAGTATCCCAAAGCCCAAATATCAGACTTATATTAATAATTGTTGG-GTCTGTTTGAGAACAATTGGGGGCTCAAGTAGTAGGGTGTACCAATGAGGGTACTAGCCATGTCACAGTTGCCATAGTGATCTTGGCCAGGGTACTCCCACCAGATATTTGATTT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20741570 269 - 38779656 TGGTTCTGCCAGCTCTGAGCTCTAGTCTATTGGCATCAGTGGCAGCTTT-----AATAATCTGGAAAATGAAAGAATTGGTATTTTTTACATTGAAAGTATGCTTTGGGGTGGCCATTTAATAAATATAGTATCCCAAAGCCCAAATATCAGATCT------ACAGTTT-TAG-GGTCCTTGGAGGACATCTGGAGGCTCATGTAGCAGGGTGTGCCAGTGAAGGTACTAGCCATGCCACAGTTGCCATGGTGA------CCCGGGAAGTCCTACCTAGT-TATGATTT i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819108 0 + 39895921 C e mm10.chr16 78115987 538 + 98207768 I a score=880720.000000 s hg38.chr21_KI270874v1_alt 64503 102 + 166743 TAAGTAGTCCATAGAATATCAAAGAAAGAGTTGGTCACCAAATACAGATTTTt-aaaataaatgtaaaccattagcatatatagataaaatataaaaatgaat s panTro5.chr21 3689024 102 + 33445071 TAAGTAGTCCATAGAATATCAAAGAAAGAGTTGGTCACCACATACAGATTTTT-AAAATAAATGTAAGCCATTTGCATGTATAGATAAAATATAAAAATGAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17315924 102 + 46275980 TAAGTAGTCCATAGAATATCAAAGAAAGAGTTGGTCACCACATACAGATTTTT-AAAATAAATGTAAGCCATTTGCATGTATAGATAAAATATAAAAATGAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3254949 102 - 13858734 TAAGTAGTCCGCAGAATATCAGAGAAAGAGTTGGTCACCAAATACAGTTTTTT-AAAATAAATGTAAACCATTTGCATGTATAGATAAAATATAAAAATGAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440080 102 + 32716333 TAAGTAGTCCACAGAATATCAAAGAAAGAATTGGCCACCAAATACAGATTTTT-AAAATAAATGTAAACCATTTGCATGTATAGATAAAATATAAAAATGAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391722 103 - 185818997 TAAGTAGTCCACAGAATATCAAAGAAAGCTTTGGTCACCAAGTACAGATTTTTAAAAATAAATGTAAACTATTTGCATGTATAGACAAAATATAAAAATGAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217835 102 - 192294377 TAAGTAGTCCACAGAATATCAAAGAAAGCTTTGGTCACCAAGTACAGATTTTT-AAAATAAATGTAAACTATTTGCATGTATAGACAAAATATAAAAATGAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8698219 102 + 9440265 TAAGTAGTCCACAGAATATCAAAGAAAGCTTTGGTCACCAAGTACAGATTTTT-AAAATAAATGTAAACTATTTGCATGTATAGACAAAATATAAAAATGAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427639 102 + 21915920 TAAGTAGTCCACAGAATATCAAAGAAAGCGTTGGTCATCAAGTACAGATTTTT-AAAATAAATGTAAACTATTTGCATGTATAGACAAAATATAAAAATGAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002426 102 - 90373283 TAAGTAGTCCACAGAATATCAAAGAAAGCGTTGGTCACCAAGTACAGATTTTT-AAAATAAATGTAAACCATTTGCATGTATAGACAAAATATAAGAATGAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181862 102 + 4234846 TAAGTAGTCCACAGAATATCAAAGAAAGCGTTGGTCACCAAGTACAGATTTTT-AAAATAAATGTAAACTATTTGCATGTATAGACAAAATATAAAAATGAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 185984 102 - 13750039 TAAGCAGTCCACAGAGTATCACAGAAAGTGTTGGTCACCAAATACAGATTTTT-AAAATAAATGTAAACCATTTGCATGTATAGATAAAATATAAAAATGAAT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19186004 102 + 47401472 TAAACAGTCCAAAGAATGTCAAAGAAAGTGTCAATAACTAAATGCAGATTTTC-AAAATGAATTTAAACCATTTGCATATGCAGATAAAATATAAAAATGAAT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1085307 102 + 2694913 TAAACAGTCCAAAGAATGTCAAAAAAAGTGTTGGTAACTAAATACATATTTTC-AAAATGAATTTAAACCATTTGCATATGTAGAGAAAATGCAAAAATGAAT i proCoq1.NW_012144079v1 C 0 I 511 s otoGar3.GL873528 20741839 102 - 38779656 TAAGCAGTCCAAAGGATGTCAAAGAAAGTATTAGCAACTAAATACAGATTTTT-AAAATGAATTTAAACCATTTGCCTATGTAGAGAAAATATAAAAATGAAT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13819108 91 + 39895921 TAAGCAGTCCACAGAATTTCAAATAGTGTAAT--------AATTCAG-TTTTT-AAAATGGACTTAAACCATTTTCATGTATAGATATATT--AAAAACAAAC i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=629303.000000 s hg38.chr21_KI270874v1_alt 64605 92 + 166743 gcaaataATTTGGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCAC-AGTATTTATTGTCTTGATCGAAATGTT---AG s panTro5.chr21 3689126 92 + 33445071 GCAAATAATTTTGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCAC-AGTATTTATTGTCTTGATCAAAATGTT---AC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316026 92 + 46275980 GCAAATAATTTTGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCAC-AGTATTTATTGTCTTGATCAAAATGTT---AC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255051 92 - 13858734 GCAAATAATTTTGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCAC-AGTATTTATTGTCTTGATCGAAATGTT---AG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440182 95 + 32716333 GCAAATAATTTTGTTTTTCT-AGAAAGCATCTAGTATTATGTTATTCAAAATAATATTGTTCAC-AGTATTTATTGTCTTAATTGAAATGTTAGAAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391825 95 - 185818997 CCACATAATTTTGTTTTTCT-AGAAAGCATCTGGTATTGTATTATTCAAAATAATATTGTTCAC-AGTATTGATTGTCTTGATAGAAATGTTAGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162217937 95 - 192294377 CCACATAATTTTGTTTTTCT-AGAAAGCATCTGGTATTGTATTATTCAAAATAATATTGTTCAC-AGTATTGATTGTCTTGATAGAAATGTTAGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8698321 95 + 9440265 CCACATAATTTTGTTTTTCT-AGAAAGCATCTGGTATTGTATTATTCAAAATAATATTGTTCAC-AGTATTGATTGTCTTGATAGAAATGTTAAAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8427741 95 + 21915920 CCACATAATTTTGTTTTTCT-AGAAAGCATCTGGTATTGTATTATTCAAAATAATATTGTTCAC-AGTATTGATTGTCTTGATAGAAATGTTAGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002528 95 - 90373283 CCACATAATTTTGTTTTTCT-AGAAGGCATCTAGTATTATATTATTCAAAATAATATTGTTCAC-AGTATTTATTGTCTTGATAGAAATGTTAGAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2181964 95 + 4234846 CCACATAATTTTGTTTTTCT-AGAAAGCATCTGGTATTGTATTATTCAAAATAATATTGTTCAC-AGTATTGATTGTCTTGATAGAAATGTTAGAAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186086 95 - 13750039 CCACATCATTTTGTTTTTCT-AGAAAGCATCTAGTATTATATTATTCAAAATAATATTGTTCAC-AGTATTTATTGTCTTGACAGAAATGTTAGAAG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19186106 85 + 47401472 AGGAATGATT---TGTTTCT-GGAAAGTATCTAGTA-----TTATTCAAAACAATATTGTTTACAGGAATTTATTGTCTTGGAAGAAATGTTAG--- i micMur3.chr31 C 0 I 380 s otoGar3.GL873528 20741941 87 - 38779656 AGAAATGATTTTGTTTTTCG-AGAAAGTTTTTAGTA-----TTATTCAAAGCAATATTGTTTAC-GGTATTTATGATCTTGGTAGAAGTGTTAG--- i otoGar3.GL873528 C 0 I 3 s canFam3.chr31 13819199 83 + 39895921 ACAAATGATTTTGCTTTTCTAAAAAAGTATCTAGTA-----TTATTGAAAATAATACCATTTAT------TTGTTGTCCAGGTAGAAAGGTTAG--- i canFam3.chr31 C 0 I 3 e proCoq1.NW_012144079v1 1085409 511 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=537654.000000 s hg38.chr21_KI270874v1_alt 64697 79 + 166743 TTTTCTTTTGACTTAATTTTAGTTTCTGTTTAATTCCTAGGAAGGCTATTGGTTT---AAAGAAAAAGTCTTACCACTCAAA s panTro5.chr21 3689218 79 + 33445071 TTTTCTTTTGACTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT---AAAGAAAAAGTCTTACCACTCAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316118 79 + 46275980 TTTTCTTTTGACTTAATTTTAGTTTCTGTTTAACTCCTAGGAAAGCTATTGGTTT---AAAGAAAAAGTCTTACCACTCAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255143 79 - 13858734 TTTTCTTTTGACTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT---AAAGAAAAAGTCTTACCACTCAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440277 79 + 32716333 TTTTCTTTTGACTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT---AAAGAAAAAGTCTTACCACTCAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391920 79 - 185818997 TTTTCTTTTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT---AAAAAAAAAGTCTTACCACTCAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218032 79 - 192294377 TTTTCTTTTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT---AAAAAAAAAGTCTTACCACTCAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8698416 79 + 9440265 TTTTCTTTTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT---AAAAAAAAAGTCTTACCACTCAAG i macNem1.NW_012019910v1 C 0 I 295 s cerAty1.NW_012002954v1 8427836 80 + 21915920 TTTTCTTTTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT--AAAAAAAAAAGTCTTACCACTCAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002623 81 - 90373283 TGTTCTTCTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT-AAAAAAAAAAAGTCTTACCACTCAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182059 81 + 4234846 TTTTCTTTTGATTTAATTTTAGTTTCTGTTTAATTCCTAGGAAAGCTATTGGTTT-AAAAAAAAAAAGTCTTACCACTCAAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186181 82 - 13750039 TTTTCTTTTGATTTAATTTCAGTTTCTGTTTAATTCCTAGAAAAGCTATTGGTTTAAAAAAAAAAAAGTCTGACCACTCAAG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20742031 73 - 38779656 TTTTGTTTTGACTTAATTTT------TTTTTAATTCCTAGGAAAGCTATTGGTAA---GGGAAAAAATTCCTACCATTTAAG i otoGar3.GL873528 I 3 C 0 s canFam3.chr31 13819285 69 + 39895921 TTTTCTCTTGACTTAATTCTATTT----TTTAATTTCAAAGAAAGCTATTGGT---------AAAAAGTGTTAccattcaag i canFam3.chr31 I 3 C 0 e proCoq1.NW_012144079v1 1085409 511 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19186191 380 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=1030647.000000 s hg38.chr21_KI270874v1_alt 64776 164 + 166743 AATATGAGTTGA-TAAAGACAGTAAAAACCATGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATATAAGAAAGGGAAGAAGAAATGGTGAAAA-----AGAATCATAAAAACAAAGATAAAC s panTro5.chr21 3689297 164 + 33445071 AATATGAGTTGA-TAAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATATAAGAAAGGGAAGAAAAAATGGTGAAAA-----AGAATCATAAAAACAAAGATAAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316197 164 + 46275980 AATATGAGTTGA-TAAAGACAGTAAAAGCCCTGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATATAAGAAAGGGAAGAAAAAATGGTGAAAA-----AGAATCATAAAAACAAAGATAAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255222 163 - 13858734 AATATGAGTTGA-TAAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATATAAGAAAGGGAAGAAAAAATGGTGAAAA-----AGAATCAT-AAAACAAAGATAAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440356 164 + 32716333 AATGTGAGTTGA-TAAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACAA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATATAAGAAAGGGAAGAAGAAATGATGAAAA-----AGAATCATAAAAACAAAGATAAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155391999 169 - 185818997 AATATGAGTTGA-TAAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACCA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATACAAGAAAGTGAAGAAGAAATGATGAAAAAAGAGAGAATCGTAAAAGCAAAGATAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218111 169 - 192294377 AATATGAGTTGA-TAAAGACAGTAAAAACGCTGCGTTATCATCTTTGTGCAGTTTACCA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATACAAGAAAGTGAAGAAGAAATGATGAAAAAAGAGAGAATCGTAAAAGCAAAGATAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8698790 169 + 9440265 aaTATGAGTTGA-TAAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACCA-----GACACTGTGCCCATAATACTACATTCTCAATAAAGAATAAA-GGAAGGAAAAATACAAGAAAGTGAAGAAGAAATGATGAAAAAAGAGAGAATCGTAAAAGCAAAGATAAAC i macNem1.NW_012019910v1 I 295 C 0 s cerAty1.NW_012002954v1 8427916 169 + 21915920 AATATGAGTTGA-TAAAGACAATAAAAACCCTGTGTTATCATCTTTGTGCGGTTTACCA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATACAAGAAAGTGAAGAAGAAATGATGAAAAAAGAGAGAATCGTAAAAGCAAAGATAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002704 165 - 90373283 CATATGAGTTGA-T----ACAGTAAAAACCCTGTGTTATCATCTTTGTGTGGTTTACCA-----GACACTCTGCCCATAAAAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATACAAGAAAATTAAGAACAAATGATGATAAAAGAAAGAACCATAAAAGCAAAGATAAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182140 169 + 4234846 AATATGAGTTGA-TAAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACCA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATCCAAGAAAGTGAAGAAGAAATGATGAAAAAAGAGAGAATCGTAAAAGCAAAGATAAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186263 169 - 13750039 AATATGAGTTGA-TAAAGACAGTAAAAACCCTGTGTTATCATCTTTGTGCAGTTTACCA-----GACACTGTGCCCATAATAATACATTCTCAATAAAGAATAAA-GGAAGGAAAAATACAAGAAAGTGAAGAAGAAATGATGAGAAAAGAGAGAAGCATAAAAGCAAAGATAAAC i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20742104 152 - 38779656 GATAGGAGT----TAAAGGCAATCA---CCCAGTCTTAACATCTCTGTGCCGTTTGTAA-----GACATTATGCCC-------TATA----Caggaaggaaggaacagagagaaaaatatgagaaaatgaagaagagatgatgaaag-gaagagaagcacaaaaacagtggtaaac i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13819354 158 + 39895921 aatatgagttggttgagggcagtaa---tccttttttgtcatctttgtgtaccTTACAATATATAACAGTGTCCTACGTATGATACACACTTAA--------GAA-GAAAAAGAAAATACGAAAAAATGTAAAAGAGATTATGAAAA-----TGGAGCAT-AAAATAAAGGTAAGC i canFam3.chr31 C 0 I 175 e proCoq1.NW_012144079v1 1085409 511 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19186191 380 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=829419.000000 s hg38.chr21_KI270874v1_alt 64940 146 + 166743 TCATG------------AATCAATAAaagaga-------gaagaaaaggga-aaagtaa----------a--agaagaaaaacataaagag---------ggaggggaagatcatgaaagacaagaaaaaagacgaaagaTAA---TT-TTTTTCTATAACACAACAGTAACATGGCAAGGAATTCTCAAC s panTro5.chr21 3689461 146 + 33445071 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGA-AAAGTAA----------A--AGAACAAAAACATAAAGAG---------GGAGGGGAAGATCATGAAAGACAAGAAAAAAGACGAAAGATAA---TT-TTTTTCTATAACACAACAGTAACATGGCAAGGAATTCTCAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316361 144 + 46275980 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGA-AAAGTAA----------A--AGAACAAAAACATAAAGAG---------GGAGGGGAAGATCATGAAAGACAAG-AAAAAGATGAAAGATAA----T-TTTTTCTATAACACAACAGTAACATGGCAAGGAATTCTCAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255385 141 - 13858734 TCATG------------AATCAATAAA----A-------GAAGAAAAGTGA-AAAGT-A----------A--AGAAGAAAAACATAAAGAG---------GGAGGGGAAGATCATGAAAGACAAGAAAAAAGACGAAAGATAA---TT-TTTTTCTATAACACAACAGTAACAAGGCAAGGAATTCTCAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440520 145 + 32716333 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGA-AAGGTAA----------A--AGAAGAAAAACATAAAGAA---------GGAGGGGAAGATCATGAAAGACAAGAAAAAAGACAAAACATAA----T-TTTTTCTATAACACAACAGTAACATGGCAAGGAATTCTCAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392168 144 - 185818997 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGA-AAGGTAC----------A--AGAAGAAAAACATAAAGAA---------GGAGGGGAAGTTCATGAAGGACAAGAAAAAAGACAAAAGATAA------TTTTTTTATAGCACAACACTAACATGGCAAGGAATTCTCAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218280 144 - 192294377 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGA-AAGGTAC----------A--AGAAGAAAAACATAAAGAA---------GGAGGGGAAGTTCATGAAGGACAAGAAAAAAGACAAAAGATAA------TTTTTTTATAACACAACACTAACATGGCAAGGAATTCTCAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8698959 143 + 9440265 TCATG------------AATCAATAAA--AGA-------GAAGAAAAGGGA-AAGGTAC----------A--AGAAGAAAAACATAAAGAA---------GGAGGGGAAGTTCATGAAGGACAAGAAAAAAGACAAAAGATAA----T-TTTTTTTATAACACAACACTAACATAGCAAGGAATTCTCAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428085 144 + 21915920 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGA-AAGGTAC----------A--AGAAGAAAAACATAAAGGA---------GGAGGGGAAGTTCATGAAGGACAAGAAAAATGACAAAAGATAA------TTTTTTTATAACACAACACTAACATGGCAAGGAATTCTCAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15002869 144 - 90373283 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGA-AAGGTAC----------A--AGAAGAAAAACATAAAGAA---------GGAGGGGAAGTTCATGAAGGACCAGACAAAAGACAAAAGATAA------TTTTTTTGTAACACAACACTAACATGGCAAGGAATTCTCAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182309 144 + 4234846 TCATG------------AATCAATAAAAGACA-------GAAGAAAAGGGA-AAGGTAC----------A--AGAAGAAAAACATAAAGAA---------GGAGGGGAAGTTCATGAAGGACAAGAAAAATGACAACAGATAA------TTTTTTTATAACACAACACTAACATGGCAAGGAATTCTCAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186432 144 - 13750039 TCATG------------AATCAATAAAAGAGA-------GAAGAAAAGGGA-AAGGTAC----------A--AGAAGAAAAACATAAAGAA---------GGAGGGGAAGTTCATGAAGGACAAGAAAAAAGACAAAAGATAA------TTTTTTTACAACACAACACTAATATGGCAAGGAATTCTCAAT i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20742256 127 - 38779656 ttaca------------aataaataaaagaga-------gatgaaaggggaggaggtaa----------aagagaagaaaaatacacagaa---------gaaga-----------------aagaaacaaagTAGAAGACAA---TTGTTTTTATATCAGACAACAGGAACATAGCAAGGGAAT------ i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13819687 176 + 39895921 tcatgcactgtctctcaaataagtaaataaaatctttttaaaaaaTAAATA-AGGGTAAGCTTATAACGA--AGAATAAGGAGACAAAAAAGAGATCTGTGAAGGAGAAGGGAAAGGTGGGGAAGAAAAGAGACAAAATAAAAGAATT-CTTTTGTATCACACAACAGTAACATGGCAAT----------- i canFam3.chr31 I 175 C 0 e proCoq1.NW_012144079v1 1085409 511 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19186191 380 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=298624.000000 s hg38.chr21_KI270874v1_alt 65086 39 + 166743 TCTCAAGATTTACTGAAATTTTGACAGAACTCAGAGAGA s panTro5.chr21 3689607 39 + 33445071 TCTCAAGATTTATTGAAATTTTGACAGAACTCATAGAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316505 39 + 46275980 TCTCAAGATTTATTGAAATTTTGACAGAACTCATAGAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255526 39 - 13858734 TCTCAAGATTTATTGAAATTTTGACAGAACTCATAGAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440665 39 + 32716333 TCTCAAGATTTACTGAAATTTTGACAGAACTCATAGAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392312 39 - 185818997 TCTCGAGATTTACTCAAATTTTGACAGAACTCATAGAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218424 39 - 192294377 TCTCAAGATTTACTCAAATTTTGACAGAACTCATAGAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699102 39 + 9440265 TCTCAAGATTTACTCAAATTTTGACAGAACTCATAGAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428229 38 + 21915920 TCTCAAGATTTA-TCAAATTTTGACAGAACTCATAGAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003013 39 - 90373283 TCTCAAGATTTACTCAAATTTTGACAGAACTCATAGAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182453 38 + 4234846 TCTCAAGATTTA-TCAAATTTTGACAGAACTCATAGAGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186576 39 - 13750039 TCTCAAGATTTACTCAAATTGTGATAGAACTCATAGAGA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19186571 39 + 47401472 TCTCAAGACTTAGTCAAATTTTGGCAGAAGCTATAGAGA i micMur3.chr31 I 380 C 0 s otoGar3.GL873528 20742383 38 - 38779656 TCTCAAGACTTAGCCAAATTTTGGCAG-AGCTGTAGAGA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13819863 39 + 39895921 TCTCAAGGCTTAGTAAAGTTTTGGCAGAAGCTATAGAGA i canFam3.chr31 C 0 I 453 e proCoq1.NW_012144079v1 1085409 511 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78115987 538 + 98207768 I a score=28456.000000 s hg38.chr21_KI270874v1_alt 65125 4 + 166743 CTGT s panTro5.chr21 3689646 4 + 33445071 CTGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316544 4 + 46275980 CTGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255565 4 - 13858734 CTGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440704 4 + 32716333 CTGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392351 4 - 185818997 CTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218463 4 - 192294377 CTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699141 4 + 9440265 CTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428267 4 + 21915920 CTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003052 4 - 90373283 CTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182491 4 + 4234846 CTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186615 4 - 13750039 CTGT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19186610 4 + 47401472 TTAT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20742421 4 - 38779656 TTAT i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1085409 511 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=491931.000000 s hg38.chr21_KI270874v1_alt 65129 66 + 166743 AGAATGTGTGCTTGAAACGTGAATGAAGAAAAGAGAAACAAATCAGATAATGGGCATAAGGTAGAC s panTro5.chr21 3689650 66 + 33445071 AGAATGTGTGCTTGAAACGTGAATGAAGAAAAGAGAAACAAATCAGATAATGGGCATAAGGTAGAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316548 66 + 46275980 AGAATGTGTGCTTGAAACGTGAATGAAGAAAAAAGAAACAAATCAGATAATGGGCATAAGGTAGAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255569 66 - 13858734 AGAATGTGTGCTTGAAACGTGAATGAAGAAAAGAGAAACAAATCAGATAATGGGCGTAAGGTAGAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440708 66 + 32716333 AGAATGTGTGCTTGAAACGTGAATGAAGAAAAGAGAAACAAATCAGATAATGGGCATAAAGTAGAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392355 62 - 185818997 AGAATGTGTGCTTGAAACATGAATGAAGAAAAGAGAAACAAATCAGA----GGGTGTAAAGTAGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218467 62 - 192294377 AGAATGTGTGCTTGAAACATGAATGAAGAAAAGAGAAACAAATCAGA----GGGTGTAAAGTAGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699145 62 + 9440265 AGAATGTGTGCTTGAAACATGAATGAAGAAAAGAGAAACAAATCAGA----GGGTGTAAAGTAGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428271 62 + 21915920 AGAATGTGTGCTTGAAACATGAATAAAGAAAAGAGAAACAAATCAGA----GGGTGTAAAGTAGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003056 62 - 90373283 AGAATGTGTGCTTGAAACATGAATGAAGAAAAGAGAAACAAATCAGA----GGGCATAAAGTAGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182495 62 + 4234846 AGAATGTGTGCTTGAAACATAAATGAAGAAAAGAGAAACAAATCAGA----GGGTGTAAAGTAGAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186619 60 - 13750039 AGAATGTGTGCTTGAAACATGAATGAAGAAA--AGAAACAAATCAAA----GGGTGTAAAGTAGAC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19186614 66 + 47401472 AGAATTTGTGTTTGAAACATGAATAAGGAAAAGTGAAGCAAGTCAGATAATTGGCATAAAGTAGAC i micMur3.chr31 C 0 I 122 s proCoq1.NW_012144079v1 1085920 66 + 2694913 AGAATTTGTGTTTGAAACATGAATAAAGAAAAGTGAAGCAAGTCAGATAATTGGCATAAAGTAGAC i proCoq1.NW_012144079v1 I 511 I 1 s otoGar3.GL873528 20742425 66 - 38779656 AGAATGTGTGTTGGAAACAGGAGTAAAGAAAAGTGAAACACAGCGGATAATGAGCCTCAAGCAGAC i otoGar3.GL873528 C 0 I 1 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=19645.000000 s hg38.chr21_KI270874v1_alt 65195 4 + 166743 TCTT s panTro5.chr21 3689716 4 + 33445071 TCTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316614 4 + 46275980 TCTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255635 4 - 13858734 TCTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440774 4 + 32716333 TCTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392417 4 - 185818997 TCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218529 4 - 192294377 TCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699207 4 + 9440265 TCTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428333 4 + 21915920 TCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003118 4 - 90373283 TCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182557 4 + 4234846 TCTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186679 4 - 13750039 TCTT i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1085987 3 + 2694913 TTT- i proCoq1.NW_012144079v1 I 1 I 40 s otoGar3.GL873528 20742492 3 - 38779656 TCT- i otoGar3.GL873528 I 1 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19186680 122 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=188958.000000 s hg38.chr21_KI270874v1_alt 65199 38 + 166743 ATCCGAATGTACAAAAGTGAGTGGGTATATTTTTTTAA s panTro5.chr21 3689720 38 + 33445071 ATCAGAATGTACAAAAGTGAGTGGGTATATATTTTAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316618 38 + 46275980 ATCAGAATGTACAAAAGTGAGTGGGTATATTTTTTTAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255639 38 - 13858734 ATCACAATGTACAAAAGTGAGTGGATGTATTTTTTTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440778 38 + 32716333 ATCAGAATGTACAAAAGTGAGCGGATATATCTTTTTAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392421 37 - 185818997 AACAGAATGTACAAAAGTGAGTGGAAATATTTTTTTT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218533 37 - 192294377 AACAGAATGTACAAAAGTGAGTGGAAATATTTTTTTT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699211 37 + 9440265 AACAGAATGTACAAAAGTGAGTGGAAATATTTTTTTT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428337 37 + 21915920 AACAGAATGTACAAAAGTGAGTGGAAATATTTTTTTA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003122 37 - 90373283 AACAGAATGTATAAAAGTGAGTGGAAATATTTTTTTT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182561 38 + 4234846 AACAGAATGTACAAAAGTGAGTGGAAATATTTTTTTTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186683 37 - 13750039 AACAAAATGTACAAAAGTGAGTGGAAATATTTTTTTT- i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20742495 31 - 38779656 -------TTTATAAGAGTGAGAGGAAATATTTTTTTAA i otoGar3.GL873528 C 0 I 1 e proCoq1.NW_012144079v1 1085990 40 + 2694913 I e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19186680 122 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=567546.000000 s hg38.chr21_KI270874v1_alt 65237 89 + 166743 AAATAAAGACAGTTTtatggtatgaatgtgtctcccaaaattcatatgatagaacttaatcaccaatgtgattttaccaagatgtggag s panTro5.chr21 3689758 89 + 33445071 AAATAAAGACAGTTTtatagtatgaatgtgtctcccaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgtggag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316656 89 + 46275980 AAATAAAGACAGTTTtatagtatgaatgtgtctcccaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgtggag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255677 89 - 13858734 AAATAAAGACAGTTTtatggtatgaatgtgtctcccaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgtggag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440816 87 + 32716333 AAATAAAG--AGtgttatggtatgaatgtgtcccccaaaattcatgtgatagaacttcatcaccaatgtgattttatcaagatgtggag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392458 88 - 185818997 AAATAGAGACAGtgttatggtatgaatgtgtccccaaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgt-gag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218570 88 - 192294377 AAATAGAGACAGtgttatggtatgaatgtgtccccaaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgt-gag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699248 88 + 9440265 AAATAGAGACAGtgttatggtatgaatgtgtccccaaaaattcatatgatagaacctaatcaccaatgtgattttatcaagatgt-gag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428374 88 + 21915920 AAATAGAGACAGtgttatggtatgaatgtgtccccaaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgt-gag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003159 88 - 90373283 ACATAGAGACAGTATtatggtatgaatgtgtccccaaaaattcatatgatagaacttaatcaccaatgtgattttatcaagatgt-gag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182599 88 + 4234846 AAATAGAGACAGtgttatggtatgaatgtgtccccaaaaattcatatgatagaacttaattaccaatgtgattttatcaagatgt-gag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186720 86 - 13750039 AAATAGAGACAGtgttacggtatgaatgtgtccccaaaaattcatatg--agaacttaatcaccaatgtgattttatcaagatgt-gag i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1086030 79 + 2694913 AACTAAAGGCAATTctatgatctgaatacgtctccagaaattcatacgataaaacttaatcatgaat----------taagaggtgggg i proCoq1.NW_012144079v1 I 40 C 0 s otoGar3.GL873528 20742527 79 - 38779656 AACTAAAGGCAGtgctatggtttgaatatgtctcctgaaaatcatacaataaaacttaatcaccaat----------taagaggaagtg i otoGar3.GL873528 I 1 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e micMur3.chr31 19186680 122 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=411665.000000 s hg38.chr21_KI270874v1_alt 65326 49 + 166743 actttagggagttattaagtcatgaaagcagagtcatcatggatgagat s panTro5.chr21 3689847 49 + 33445071 actttagggagttattaagtcatgaaagcagagtcatcatggatgagat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316745 49 + 46275980 actttagggagttattaagtcatgaaagcagagtcatcatggatgagat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255766 49 - 13858734 actttagggagttattaagtcatgaaagcagagtcatcatggatgagat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440903 49 + 32716333 actttagggagttattaagtcatgaaagcagagtcatcatggatgagat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392546 49 - 185818997 actttagggagttattaagtcataaaagcagagtcatcagggatgagat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218658 49 - 192294377 actttagggagttattaagtcataaaagcagagtcatcagggatgagat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699336 49 + 9440265 actttagggagttattaagtcataaaagcagagtcatcagggatgagat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428462 49 + 21915920 actttagggagttattaagtcataaaagcagagtcatcggggatgagat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003247 49 - 90373283 actttaaggagttattaagtcataaaagcagagtcatcggggatgagat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182687 49 + 4234846 actttagggagttattaagtcataaaagcagagtcatcggggatgagat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186806 49 - 13750039 actttagggagttattaagtcataaaagcagagtcattgtggatgagat i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19186802 49 + 47401472 actttaggaattgattaagtcataaaagcagagccctcatggatgagat i micMur3.chr31 I 122 C 0 s proCoq1.NW_012144079v1 1086109 49 + 2694913 acttcaggaagtgattaagtcataaaagcagaaccctcatggatgggat i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20742606 49 - 38779656 gctttaagaagctagtaatttataaaagcagaggcctcacggatgggat i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=4912.000000 s hg38.chr21_KI270874v1_alt 65375 2 + 166743 ta s panTro5.chr21 3689896 2 + 33445071 ta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316794 2 + 46275980 ta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255815 2 - 13858734 ta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440952 2 + 32716333 tc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155392595 2 - 185818997 ta i rheMac8.chr3 C 0 I 1549 s micMur3.chr31 19186851 2 + 47401472 ta i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1086158 2 + 2694913 ta i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20742655 2 - 38779656 ta i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I e colAng1.NW_012120598v1 186855 0 - 13750039 C e cerAty1.NW_012002954v1 8428511 0 + 21915920 C e macNem1.NW_012019910v1 8699385 0 + 9440265 C e manLeu1.NW_012102865v1 2182736 0 + 4234846 C e chlSab2.chr2 15003296 0 - 90373283 C e macFas5.chr3 162218707 0 - 192294377 C a score=400050.000000 s hg38.chr21_KI270874v1_alt 65377 224 + 166743 gagccattaa-aaaagggcttgaaggagtaggttctttctcttcccctcttctgcgatgtgaggacactgctttcaaggcagttccaagtttcatcttggaagcagaggctggagccctcaccagacact-aacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaat-----ttctttataaattacacagtctcaggtat-ttgttata s panTro5.chr21 3689898 224 + 33445071 gagccattaa-aaaagggcttgaaggagtaggttctttctcttcccctcttctgcgatgtgaggacactgctttcaaggcagttccaagtttcatcttggaagcagaggctggagccctcaccagacact-aacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaat-----ttatttataaattacacagtctcaggtat-ttgttata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17316796 224 + 46275980 gagccattaa-aaaagggcttgaaggagtaggttctttctcttcccctcttctgcgatgtgaggacactgctttcaaggcagttccaagtttcatcttggaagcagaggctggagccctcaccagacact-aacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaat-----ttatttataaattacacagtctcaggtat-ttgttata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3255817 214 - 13858734 gagccattaa-aaaagggcttgaaggagtaggttctttctcttcccctcttctgcgatgtgaggacactgctttcaaggcagttccaa----------ggaagcagagactggagccctcaccagacact-aacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaat-----ttctttataaattacacagtctcaggtat-ttgttata i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4440954 224 + 32716333 gagccattaa-aaaagagcttgaaggagtaggttctttctcttcccctcttctccgatgtgaggacgctgctttcaaggcatttccaagtttcatcttggaagcagaggctggagccctcaccagacact-aacctgcagccactttgatcttggacttcactgtttccagaaccatgaggaaataaat-----ttctttataaattacacagtctcaggtat-tcgttata i nomLeu3.chr25 C 0 C 0 s micMur3.chr31 19186853 221 + 47401472 ggaccattac-ataagtgtttgagggaataggttctcccttttcctttctccaaccatgtgaggacactatgttcaaggaag----------catcttgaaaacagagactggggctcttaccaggcaccaaacctgcagactacttgatcttggtcttcccagttttcagagctatgagggaataaatttttgttctttgtaaataactcagtctcagatattttgttata i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1086160 221 + 2694913 ggaccattat-aaaagagcttgaggaaacaggttctctcttttcctttctcccaccatgtgaggacactgtgtcctaggaag----------catcttggacgcagaaactgtatcccttaccagaccccaaacctgcagacaccttcatcttggagttcccagttttcagaaccatgagggaataaatttttgttctttgtaaatgactcagtctcagatattttgttata i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20742657 219 - 38779656 ggacccttataaaaagagcttgaggg-gtacattctctcttttcccttctctcaccacatgaggacattgtgtttaaggcac----------catcttagagacag--attcaggccctcaccagacatcaaacctgcagacaccttgatcttagccttcgtggttttcagacccatgagggaataaatgtctgttctctataaataactcagtctcaggtatcttgttata i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3586803 3431 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I e colAng1.NW_012120598v1 186855 0 - 13750039 C e cerAty1.NW_012002954v1 8428511 0 + 21915920 C e macNem1.NW_012019910v1 8699385 0 + 9440265 C e manLeu1.NW_012102865v1 2182736 0 + 4234846 C e chlSab2.chr2 15003296 0 - 90373283 C e macFas5.chr3 162218707 0 - 192294377 C e rheMac8.chr3 155392597 1549 - 185818997 I a score=117285.000000 s hg38.chr21_KI270874v1_alt 65601 55 + 166743 acagtacagataaactaa--gaAAGAC----AATGATTTTGCATCTATATCTTGAAGAAAA s panTro5.chr21 3690122 55 + 33445071 acagtacagataagctaa--gaAAGAC----AATGATTTTGCATCTATATCTTGAAGAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317020 55 + 46275980 acagtacagataaactaa--gaAAGAC----AATGATTTTGCATCTATATCTTGAAGAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256031 55 - 13858734 acagtacagataaactaa--gaAAGAC----AATGATTTTGCATCTATATCTTGAAGAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441178 55 + 32716333 atagtacaaataaactaa--gaAAGAC----AATGATTTTGCATCTATATCTTGAAGAAAA i nomLeu3.chr25 C 0 C 0 s micMur3.chr31 19187074 55 + 47401472 gcagcataaatgagctaa--gacaGGC----AGACATTTTGCATCAGTATCTTTCAGAAAA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1086381 55 + 2694913 gcagcacagatgagctaa--gacaGGC----AATAATTCTGCATTAGCATCTTTAAGAAAA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20742876 59 - 38779656 gcagcacaaatgaactaa--gacaGACAAGGAATAAGTTCGCATCAAAATTTTCAAGAAAA i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3590234 55 - 6883506 ACATTAAAAAATAACTAAAGAATAGGC----AAT--TTTTGTATCAATATCTTTAAGAAAA i dasNov3.JH568778 I 3431 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I e colAng1.NW_012120598v1 186855 0 - 13750039 C e cerAty1.NW_012002954v1 8428511 0 + 21915920 C e macNem1.NW_012019910v1 8699385 0 + 9440265 C e manLeu1.NW_012102865v1 2182736 0 + 4234846 C e chlSab2.chr2 15003296 0 - 90373283 C e macFas5.chr3 162218707 0 - 192294377 C e rheMac8.chr3 155392597 1549 - 185818997 I a score=73121.000000 s hg38.chr21_KI270874v1_alt 65656 8 + 166743 TAAGGAAT s panTro5.chr21 3690177 8 + 33445071 TAAGGAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317075 8 + 46275980 TAAGGAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256086 8 - 13858734 TAAGGAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441233 8 + 32716333 TAAGGAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394146 8 - 185818997 taAGGAAT i rheMac8.chr3 I 1549 C 0 s macFas5.chr3 162218707 8 - 192294377 taAGGAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699385 8 + 9440265 taAGGAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428511 8 + 21915920 taAGGAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003296 8 - 90373283 taAGGAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182736 8 + 4234846 taAGGAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186855 8 - 13750039 taAGGAAT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19187129 8 + 47401472 TAAGGAAC i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1086436 8 + 2694913 TAAGGAAC i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20742935 8 - 38779656 TAAGGTGC i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3590289 8 - 6883506 TAAAGGCT i dasNov3.JH568778 C 0 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78115987 538 + 98207768 I a score=1215127.000000 s hg38.chr21_KI270874v1_alt 65664 143 + 166743 AGTATGTAAACAACTG-TTTAAAGTGTTTAA-AACAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTTATATTAA--------TTTTT-----TCTCTTTTCTAAGAACAGGATCCTCACTTTGCATGGCCTAAAACCTCAATTTGC s panTro5.chr21 3690185 143 + 33445071 AGTATGTAAACAACTG-TTTAAAGTGTTTAA-AACAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTTATATTAA--------TTTTT-----TCTCTTTTCTAAGAACAGGATCCTCACTTTGCATAGCCTAAAACCTCAATTTGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317083 143 + 46275980 AGTATGTAAACAACTG-TTTAAAGTGTTTAA-AACAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTTATATTAA--------TTTTT-----TCTCTTTTCTAAGAACAGGATCCTCACTTTGCATAGCCTAAAACCTCAATTTGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256094 143 - 13858734 AGTATGTAAACAACTG-TTTAAAGTGTTTAA-AACAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTCATATTAA--------TTTTT-----TCTCTTTTCTAAGAACAGGATCCTCACTTTGCATGGCCTAAAACCTCAATTTGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441241 142 + 32716333 AGTAGGTAAACAACTG-TTTAAAGTGTTTAA-AACAGTCTACTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTT-ATATCAA--------TTTTT-----TCTCTCTTCTAAGAACACGATCCTCACTTTGCATGGCCTAAAACCTCAATTTGC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394154 144 - 185818997 AGTATGTAAACAACTA-TTTTAAATGTTTTA-AAAAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTCGTATTAA-------TTTTTT-----TCTCTTTTCTAAGAACACAATCCTCACTTTACATGACCTAAAACCTTGATTTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218715 144 - 192294377 AGTATGTAAACAACTA-TTTAAAATGTTTTA-AAAAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTCGTATTAA-------TTTTTT-----TCTCTTTTCTAAGAACACAATCCTCACTTTACATGACCTAAAACCTTGATTTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699393 144 + 9440265 AGTATGTAAACAACTA-TTTAAAATGTTTTA-AAAAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTCGTATTAA-------TTTTTT-----TCTCTTTTCTAAGAACACAATCCTCACTTTACATGACCTAAAACCTTGATTTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428519 144 + 21915920 AGTATGTAAACAACTA-TTTAAAATGTTTTA-AAAAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTTGTATTAA-------TTTTTT-----TCTCTTTTCTAAGAACACAATCCTCACTTTACATGACCTACAACCTTGATTTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003304 144 - 90373283 AGTATGTAAACAATTG-TTTAAAGTGTTTAA-AAAAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTTGTATTAA-------TTTTTT-----TCTCTTTTCTAAGAACACGATCCTCACTTTACATGGCCTAAAACCTCAATTTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182744 144 + 4234846 AGTATGTAAACAACTA-TTTAAAATGTTTTT-AAAAGTCTATTCCATTGAAGCAC-TGTTA------CACATTAG-AATATATTTTTGTATTAA-------TTTTTT-----TCTCTTTTCTAAGAACACAATCCTCACTTTACATGACCTAAAACCTTGATTTGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 186863 144 - 13750039 AGTATGTAAACAACTG-TTTAAGGTGTTTAA-AACAGTCTATTCCATTGAAACAC-TGTTA------CACATTAG-AATATATTTTTGTATTAA-------TTTTTT-----TATCTTTTCTAAGAACACGATCCTCACTTTACATGACCTAAAACCTCAATTTGC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19187137 145 + 47401472 ACTGTATAAATAATTGTTTTAAGGTGTTTGA-AACATTCAAATCCATTGAAACAC-TGTTT------CATATTAG-AATATATCTTTATACTAT-------TTTTTT-----TCTTTTTCCTAAGAATATGAACTCCACTTTGCATAGCCTAGAACCTCAATTTGC i micMur3.chr31 C 0 I 605 s proCoq1.NW_012144079v1 1086444 142 + 2694913 ATTGTGTAAATAATTGTTTTAAGGTGTTTAA-AACATTCAAACCCATTGAAGCAC-TGTTG------CATATTAG-AATATATTTTTA---CAT-------TTTTTT-----TATTTTTTCTAAGAATATGATCTCCACTTTGCATAGCCTAGAACCTCGATTTGC i proCoq1.NW_012144079v1 C 0 I 607 s otoGar3.GL873528 20742943 141 - 38779656 ACTGTGTAAATAATTATTTTAAGGTGTTTAA-AACATTCAAATCCATTGAAATGCTTGGGG------CATATTAG-AATGTATTTTTA-----T-------TTTAAA-----TATCTTGTCTAAGAATACGATGTCCATTTTGCATGGCCTAGAACCTCTATTTGC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78116525 150 + 98207768 aatatttaaatataca-atTAAAGTATGTAA-AACACTGTATCACCCTGATGTCT-TACTA------TATGTAAG-AATATATTTT-ATACTACGTTACATTTCTAT-----TTTCTTTCCTACAAAAATGAACTTGACATTACATTGTCTAGAACTTTAATTTGC i mm10.chr16 I 538 C 0 s dasNov3.JH568778 3590297 158 - 6883506 ACTGTGTAAATAACTGTTTCTAAATGTTTAAGAACATTCCATTCCATTGAAATGC-TATTATGCCCTCACAATGGCGATTTTTCTATTTATTAA-------TTTTTTTCTCCTCTCTTTCCTAAGAACATAATTTTCACCTTGCATGGCCTAGAATATCAATTTGT i dasNov3.JH568778 C 0 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I a score=136231.000000 s hg38.chr21_KI270874v1_alt 65807 21 + 166743 AGGAAGCAGTGTGGAGAGTGG s panTro5.chr21 3690328 21 + 33445071 AGCAAGCAGTGTGGAGAGTGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317226 21 + 46275980 AGCAAGCAGTGTGGAGAGTGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256237 21 - 13858734 AGCAAGCAGTGTGGAGAGTGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441383 21 + 32716333 AGCAAGCAGTGTGGAGAGTGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394298 21 - 185818997 AGTAAGCAGTGTAGAGAGTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218859 21 - 192294377 AGTAAGCAGTGTAGAGAGTGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699537 21 + 9440265 AGTAAGCAGTGTAGAGAGTGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428663 21 + 21915920 AGCAAGCAGCGTAGAGAGTGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003448 21 - 90373283 AGCAAGCAGTGTAGAGAGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182888 19 + 4234846 AGCAAGCAGCGT--AGAGTGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187007 21 - 13750039 AGCAAGCAGTGTAGAGAGTGG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20743084 21 - 38779656 CACAAGGAACATGGGAAATGG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78116675 19 + 98207768 AGCAG--AATGGGGAAAGTGG i mm10.chr16 C 0 I 9034 s dasNov3.JH568778 3590455 21 - 6883506 AGCAAGGAGTAAGAAAAGAAG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1086586 607 + 2694913 I e micMur3.chr31 19187282 605 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I a score=551726.000000 s hg38.chr21_KI270874v1_alt 65828 101 + 166743 TAGAGcagcagtccccaacctttttggcacagagaccggtttcatggaagtcaatttttccatgaatggagggggtagacactcacatcatcagacattag s panTro5.chr21 3690349 101 + 33445071 TAGAGcagcagttcccaacctttttggcacagagaccggtttcatggaagtcaatttttccatgaatggagggggtagagactcacatcatcagacattag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317247 101 + 46275980 TAGAGcagcagtccccaacctttttggcacagagaccggtttcatggaagtcaatttttccatgaatggagggggtagagactcacatcatcagacattag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256258 101 - 13858734 TAGAGcagcagtccccaacctttttggcacagagaccggtttcatggaagtcaatttttccgtgaatggagggggtagagactcacatcatcagacattag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441404 101 + 32716333 TAGAGcagcagtctccaacctttttggcacagagactggtttcatggaagtcaatttttccatgaatggagggggtagagactcacatcatcagacattag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394319 100 - 185818997 GAGAGcagcagtccccaacttttttggcacagagaccagtttcatggaagtcaatttttccatgaatggagg-ggtagagactcacatcatcagacattag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218880 100 - 192294377 GAGAGcagcagtccccaacttttttggcacagagaccagtttcatggaagtcaatttttccatgaatggagg-ggtagagactcacatcatcagacattag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699558 100 + 9440265 GAGAGcagcagtccccaacttttttggcacagagaccagtttcatggaagtcaatttttccatgaatggagg-ggtagagactcacatcatcagacattag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428684 101 + 21915920 GAGAGcagcagtccccaacttttttggcacagagaccggtttcatggaagtcaattttttcatgaatgaaggcagtagagactcacatcatcagacattag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003469 100 - 90373283 GAGAGcagcagtccccaacttttttggcacagagaccagtttcatggaagtcaatttttccatgaatggagg-ggtagagactcacatcatcagacattag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2182907 101 + 4234846 GAGAGcagcagtccccaacttttttggcacagagaccggtttcatggaagtcaattttttcatgaatggaggcagtagagactcacgtcatcagacattag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187028 101 - 13750039 GAGAGcagcagtccccaacttttttggcacagagaccagtttcatagaagtcaatttttccatgaatggaggggatagagactcacatcatcagacattag i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3590476 11 - 6883506 ------------------------------------------------------------------------------------------TAAGATATTGG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1086586 607 + 2694913 I e micMur3.chr31 19187282 605 + 47401472 I e otoGar3.GL873528 20743105 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=209795.000000 s hg38.chr21_KI270874v1_alt 65929 35 + 166743 ttagattctcataaggagcaggcaacctagatccc s panTro5.chr21 3690450 35 + 33445071 ttagattctcataaggagcaggcaacctagatccc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317348 35 + 46275980 ttagattctcataaggagcaggcaacctagatccc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256359 35 - 13858734 ttagattctcataagcagcatgcagcctagatccc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441505 35 + 32716333 ttagattctcataaggagcatgcaacctagatccc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394419 35 - 185818997 ttagattctcataaggagcatgcaacctagatccc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162218980 35 - 192294377 ttagattctcataaggagcatgcaacctagatccc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699658 35 + 9440265 ttagattctcataaggagcatgcaacctagatccc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428785 35 + 21915920 ttagattctcataaggagcatgcaacctagatccc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003569 35 - 90373283 ttagattctcataaggagcatgcaacctagatccc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2183008 35 + 4234846 ttagattctcataaggagcatgcaacctagatccc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187129 35 - 13750039 ttagattctcataaggagcatgcaacctagatccc i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1086586 607 + 2694913 I e dasNov3.JH568778 3590487 0 - 6883506 C e micMur3.chr31 19187282 605 + 47401472 I e otoGar3.GL873528 20743105 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=54750.000000 s hg38.chr21_KI270874v1_alt 65964 8 + 166743 tcacatac s panTro5.chr21 3690485 8 + 33445071 tcacatac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317383 8 + 46275980 tcacatac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256394 8 - 13858734 tcacatac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441540 8 + 32716333 tcacatac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394454 8 - 185818997 tcacatac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162219015 8 - 192294377 tcacatac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699693 8 + 9440265 tcacatac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428820 8 + 21915920 tcacatac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003604 8 - 90373283 tcacatat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2183043 8 + 4234846 tcacatac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187164 8 - 13750039 tcacatac i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20743105 8 - 38779656 TCAAATAC i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1086586 607 + 2694913 I e dasNov3.JH568778 3590487 0 - 6883506 C e micMur3.chr31 19187282 605 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=966868.000000 s hg38.chr21_KI270874v1_alt 65972 166 + 166743 acagttcacaatagggttcatgctcctataagaatctaatgccaccactgatctgacaggaggcagagttcaggcagcagtgctcactggcctgccactcacctcttgctgtgcagcccagttcctaacaggccCAGGGTTTGGGAACCTCTGTGGTAGTGTCTGA s panTro5.chr21 3690493 166 + 33445071 acagttcacgatagggttcatgctcctataagaatctaatgccaccactgatctgacaggaggcagagttcaggcagcagtgctcactggcctgccactcacctcttgctgtgcagcccagttcctaacaggccCAGGGTTTGGGAACCTCTGTGGTAGTGTCTGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317391 166 + 46275980 acagttcacgatagggttcatgctcctataagaatctaatgccaccactgatctgacaggaggcagagttcaggcagcagtgctcactggcctgccactcacctcttgctgtgcagcccagttcctaacaggccCAGGGTTTGGGAACCTCTGTGGTAGTGTCTGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256402 166 - 13858734 acagttcacaatagggttcatgctcctataagaatctaatgccaccactgatctgacaggaggcagagttcaggcagcagtgctcactggcctgccactcacctcttgccgtgcagcccagttcctaacaggcccagggtttgggaacctctgtggtcGTGTCTGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441548 166 + 32716333 acagttcacaatagggttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagcagtgttcactggcctgccactcacctcttgctgtgtagcccagttcctaacaggtccacggtttgggaacctctgtggTAGTGTCTGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394462 166 - 185818997 gcagttcacaatagagttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacacgccCAGGGTTTGGGAACCACTGTGGTAGTGTACGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162219023 166 - 192294377 gcagttcacaatagagttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacacgccCAGGGTTTGGGAACCACTGTGGTAGTGTACGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699701 166 + 9440265 gcagttcacaatagagttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacacgccCAGGGTTTGGGAACCACTGTGGTAGTGTACGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428828 166 + 21915920 gcagttcacaatagggttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacatgcccagggtttgggaaccgctgtggTAGTGTATGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003612 166 - 90373283 gcagttcacaatagggttcatgcgcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacacgccCAGGGTTTGGGAACCGCTGTGGTAGTGTACGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2183051 166 + 4234846 gcagttcacaatagggttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgctactcacctcttgctgctcagcccagttcctaacatgcccagggtttgggaaccgctgtggTAGTGTACGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187172 166 - 13750039 gcagttcacaacagggttcatgctcctataagaatctaatgccgccactgatctgacaggaggcagagttcaggcagtagtgctcactggcctgatactcacctcttgctgctcagcccagttcctaacaggccCAGGGTTTGGGAACCACTGCGGTAGTGTATGA i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1086586 607 + 2694913 I e dasNov3.JH568778 3590487 0 - 6883506 C e micMur3.chr31 19187282 605 + 47401472 I e otoGar3.GL873528 20743113 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=7800.000000 s hg38.chr21_KI270874v1_alt 66138 1 + 166743 G s panTro5.chr21 3690659 1 + 33445071 G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317557 1 + 46275980 G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256568 1 - 13858734 G i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441714 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394628 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162219189 1 - 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699867 1 + 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428994 1 + 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003778 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2183217 1 + 4234846 G i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187338 1 - 13750039 G i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20743113 1 - 38779656 G i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1086586 607 + 2694913 I e dasNov3.JH568778 3590487 0 - 6883506 C e micMur3.chr31 19187282 605 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=2891396.000000 s hg38.chr21_KI270874v1_alt 66139 445 + 166743 AAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCTGAGATGATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAGCCAAACCATTGCCTTATAAGTCCTTGGTTTCTACATGGCCAAAAACAGAATCCAAAACTTAGGT-AGAGTTTAGCTGGAGGGACT--CACACAGAGTGACCATATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTACTCAGAGCCCATCCTTTTA-TCTCTTCATTCATTTAGtgactgtgcatgctctttgccacttgc-ttttacccaggcaacattgtatagtcttgaaaattcaccaactgtcatctcatatgtaagctcttttctgattcatcacactgatttagaagactcttgtctgtacttccac----ggcaccatgtgaa-aaatatctattata s panTro5.chr21 3690660 445 + 33445071 AAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCTGAGATGATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAGCCAAACCATTGCCTTATAAGTCCTTGGTTTCTACATGGCCAAAAACAGAATCCAAAAATTAGGC-AGAGTTTAGCTGGAGGGACT--CACACAGAGTGACCATATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTACTCAGAGCCCATCCTTTTA-TCTCTTCATTCATTTAGtgactgtgcatgctctttgccacttgc-ttttacccaggcaacattgtatagtcttgaaaattcaccaactgtcatgtcatatgtaagctcttttctgattcatcacactgatttagaagactcttgtctgtacttccac----ggcaccatgtgaa-aaatatctattata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17317558 445 + 46275980 AAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCTGAGATGATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAGCCAAACAATTGCCTTATAAGTCCTTGGTTTCTACATGGCCAAAAACAGAATCCAAAAATTAGGC-AGAGTTTAGCTGGAGGGACT--CACACAGAGTGACCATATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTACTCAGAGCCCATCCTTTTA-TCTCTTCATTCATTTAGtgactgtgcatgctctttgccacttgc-ttttacccaggcaacattgtatagtcttgaaaattcaccaactgtcgtgtcatatgtaagctcttttctgattcatcacactgatttagaagactcttgtctgtacttccac----ggcaccatgtgaa-aaatatctattata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3256569 445 - 13858734 AAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCTGAGATGATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAGCCAAACCATTGCCTTATAAGTCTTTGGTTTCTACGTGGCCAAAAACAGAATCCAAAAATTAGGT-AGAGTTTAGCTGGAGGGACT--CACACAGAGTGACCATATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGTAGAGTCACAGTCATTACTCAGAGCCCATCCTTTTA-TCTCTTCATTCATTTAGtgactgtgcatgctctttgccacttgc-ttttacccaggcaacattgtatagtcttgaaaattcaccaactgtcatctcatatgtaagctcttttctgattcatcacactgatttagaagactcttgtctgtacttccac----ggcaccatgtaaa-aaatatctattata i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4441715 446 + 32716333 AAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCAAAGATGATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAGCCAAACCATTGCCTTATAAGTCCTTGGTTTCTACGTGGCCAAAAACAGAACCCAAAAATTAGGT-AGAGTTTAGCTGGAGGGACT--CACACAGAGTGACCATATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTACCCAGAGCCCATCCTTTTT-TCTTTTCATTCATTTAGtgactgtgcatgctctctgccacttgctttttacccaggcaacattgtatagtcttgaaaattcagcaactgtcatctcatatgtaagctcttttgtgattcatcacactgatttagaagactcttgtctgtagttccac----agtaccatgtgaa-aaatatctattata i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155394629 440 - 185818997 AAAGTAGATTTACGATGCTGTAGAAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCATAATTT-TGCAACCAAACCATTGCCTTACAAGTCCTTGGTTCCTACATGGGCAAAAATGGAACCC-AAAATCAGGT-AGAGTTTAGCTAGAGGGACT--CACACAGAGTGACC--ATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCCCATCCTTT---TCTCTTCTTTCATTTAGtgactgtacatgctctttgccacttgc-ttttacccagacaacgttgtatagtcttgaaaattcagcaactgtcatctcatatgtaagctcttttctgattcaccacactgatttagaacactcttgtctgtagttccac----agtaccatgtgaa-aaatatctattata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162219190 440 - 192294377 AAAGTAGATTTACGATGCTGTAGAAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAACCAAACCATTGCCTTACAAGTCCTTGGTTTCTACATGGGCAAAAATGGAACCC-AAAATCAGGT-AGAGTTTAGCTAGAGGGACT--CACACAGAGTGACC--ATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCCCATCCTTT---TCTCTTCTTTCATTTAGtgactgtacatgctctttgccacttgc-ttttacccagacaacgttgtatagtcttgaaaattcagcaactgtcatctcatatgtaagctcttttctgattcaccacactgatttagaacactcttgtctgtagttccac----agtaccatgtgaa-aaatatctattata i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8699868 440 + 9440265 AAAGTAGATTTACGATGCTGTAGAAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAACCAAACCATTGCCTTACAAGTCCTTGGTTTCTACATGGGCAAAAATGGAACCC-AAAATCAGGT-AGAGTTTAGCTAGAGGGACT--CACACAGAGTGACC--ATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCCCATCCTTT---TCTCTTCTTTCATTTAGtgactgtacatgctctttgccacttgc-ttttacccagacaacgttgtatagtcttgaaaattcagcaactgtcatctcatatgtaagctcttttctgattcaccacactgatttagaacactcttgtctgtagttccac----agtaccatgtgaa-aaatatctattata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8428995 440 + 21915920 AAAGTAGATTTACGATGCTGTAGAAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAACCAAACCATTGCCTTACAAGTCCTTGGTTTCTACATGGGCAAAAATGGAACCC-AAAATCAGGT-AGAGTTTAGCTAGAGGGACT--CACACAGGGTGACC--ATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACGGTCATTGCTCAGAGCCCATCCTTT---TCTCTTCTTTCATTTAGtgactgtacatgctctttgccacttgc-ttttacccaggcaacgttgtatagtcttgaaaattcagcaactgtcatctcatatgtaagctcttttctgattcatcacactgatttagaagactcttgtctgtagttccac----agtaccatgtgaa-aaatatctattata i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15003779 440 - 90373283 AAAGTAGATTTACAATGCTGTA-AAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAGCCAAACCATTGCCTTACAAGTCCTTGGTTTCTACATGGCCAAAAACAGAACCCAAAAATCAGGT-AGAGTTTAGCTGGAGGGACT--CGCACAGAGTGACC--ATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCCCATCCTTT---TCTCTTCATTCATTTAGTGACTGTACATGCTCTTTGCCACTTGC-TTTTACCCAGGCAACGTTGTATAGTCTTGAAAATTCAGCAACTGTCATCTCATATGTAAGCTCTTTTCTGATTCATCACACTGATTTAGAAGACTCTTATCTGTAGTTCCAC----AGTACCATGTGAA-AAATATCTATTATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2183218 440 + 4234846 AAAGTAGATTTATGATGCTGTAGAAGAAATGCCAATATAAAAGCAGAGATAATACTTAACTCCTAACAAGTAACCAGAATTT-TGCAACCAAACCATTGCCTTACAAGTCCTTGGTTTCTACATGGGCAAAAATGGAACCC-AAAATCAGGT-AGAGTTTAGCTAGAGGGACT--CACACAGAGTGACC--ATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGCTCAGAGCCCATCCTTT---TCTCTTCTTTCATTTAGtgactgtacatgctctttgccacttgc-ttttacccaggcaacgttgtatagtcttgaaaattcagcaactgtcatctcatacgtaagctcttttctgattcatcacactgatttagaggactcttgtctgtagttccac----agtaccatgtgaa-aaatatctattata i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187339 441 - 13750039 AAAGTAGATTTACGATGCTATAGAAGAAATGCCAATATGAAAGCAGAGATAATAGTTAACTCCTAACAAGTAACCAGAATTT-TGCAGCCAAACTATTGCCTTACAAATCCTTGGTTTCTACATGGCCAAAAACGGAACCCAAAAATCAGGT-AGAGTTTAGCTAGATGGACT--CACACAGAGTGACC--ATAGCTACAGAA-GA-GCTCTGCAGTGAGAGCTGTTGAGTGCAGAGTCACAGTCATTGctcagagcccatcattt---tctcttcattcatttagtgactgtacatgctctttgccacttgc-ttttacccaggcaacattatatagtcttgaaaactcagcaactgtcatctcatatgtaagctcttttctgattcatcacactgatttagaagactcttgtctgtagttcccc----agtgccatgtgaa-aaatatctattata i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20743114 430 - 38779656 AGAATAGGTTTAACGTGCTGTAGAAGCAATGGCAACATAAAAAC--AGGTAATATTTAA---CCAACTA--AATTGAAATGA-TGCGATAAAACCATGGCCTTACAA-TCCTTGGTTTCTATGTGACCGAGAG-AGAGTCA-AACATCAGATGACAGTCCAGCTGGTGAGACTG-TCCACAGCGTGCCC--ACAGCTACTAAA-GAGGCTCCACGGTGGAGGCTTTTGAGTACAGAGTTATAA---------GAAGCTCATCCATTGATTCCCTTCATTAATTCATTGAGTGTACAAGCCCTTTTTCTATTGT-Gttcaaccaggtaaacttgtatagccttgaaaatgccacaaccttcacctcacatg-aaacctttctctgatcc-ctacactgcctgagatgcctctggtctgtggtttcatgtggagcagtgtatgaa-aaaaatctaatata i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3590487 429 - 6883506 AGAGTAGATTTATGATGCTGTGGAAAGAATGCCAGTATAAAGACAGAAGTTATAGTTATCTACTAACATCCAAACAAAGTTTATGCATCAAAATCATAAACTTGC-AGCCCTTGAATTCCATGTAGCCAAGA-CAAAACCC-AAAATCAGGTTAAGATTTGGCTGGAGAGACTGTCAGAGAGAGTGCCC--ACAGTCATGGAAGGA-GCTCTGAGATGAGAGATATTGAATGCAGAGTCACAGTCAGTACTCAGAGCTAATCTCTTTACCCTCTTCATTCATTCATT-------CAAAC------CCACCTAT-TTTCATCCAAACATTTTTGTG-----ttcaaaattctgcaattgttaccttatctaggaagctttttctgacccaccattctgatttagatgcttcttgtctatagttccat----aaaagcatttcaataAATCTGTATCATG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1086586 607 + 2694913 I e micMur3.chr31 19187282 605 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=746314.000000 s hg38.chr21_KI270874v1_alt 66584 189 + 166743 ttccatattataccatgttttaactcttcttttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatttataattTCATGGC-----------atatacatatatatatgtatatatatatgtatatatatctatgtatatatatatatatgtatatatatCTCCATGTATATCTCATTAAA s panTro5.chr21 3691105 153 + 33445071 ttccatattataccatgttttaactcttcttttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatttataattTCATGGC-----------atatacatatatatatgtatata------------------------------------tatatatatctccatgtatatCTCATTAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318003 157 + 46275980 ttccatattataccatgttttaactcttcttttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatttataattTCATGGC-----------atatacatatatatatgtgtatatata--------------------------------tatatatatctccatgtatatCTCATTAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3257014 176 - 13858734 ttccatattataccatgttttaactcttcttttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatttataattTCATGGC-----------atatacatatatatgtatatata-atatatatatatatatatatata------------tatatatatCTCCATGTATATCTCATTAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4442161 140 + 32716333 ttccatattatactatgttttaactc-----ttaaagctgtgcatcttcctcaatgactgtaaattttttaagagaacacaccatttataattTGATGGC-----------atatacatatatata--------------------------------------------tatatatatatCCGTGTATATCTCATTAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155395069 155 - 185818997 ttccatattataccatgttttaacacttcttttaaagctgtgcatcctcctcaatgactgtaaattttttaagagAACACACTATTTATAATTTGATGGC-----------atatatatatatatacacacacaca----------------------------------tatatatatattcatgtatatCTCATTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162219630 157 - 192294377 ttccatattataccatgttttaacacttcttttaaagctgtgcatcctcctcaatgactgtaaattttttaagagAACACACTATTTATAATTTGATGGC---------atatatatatatatatacacacacaca----------------------------------tatatatatattcatgtatatCTCATTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8700308 155 + 9440265 ttccatattataccatgttttaacacttcttttaaagctgtgcatcctcctcaatgactgtaaattttttaagagAACACACTATTTATAATTTGATGGC-----------atatatacatatacacacacacaca----------------------------------tatatatatatTCACGTATATCTCATTAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8429435 127 + 21915920 ttccatattataccatgttttaactcttcttttaaagctgtgcatcctcctcaatgactgtaagttttttaagagAACACACTATTTATAATTTGATGGC-------------------------------------------------------------------------ATATATATCCATGTATATCTCATTAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15004219 165 - 90373283 TTCCATATTATACCATGTTTTAACTCTTCTTTTAAAGCTGTGCATCCTCCTCAATGACTGTACA-TTTTTAAGAGAACACACCATTTAAAATTTGATGGCatatattatatatatatatttatatatatatatata----------------------------------tatatatatatCCATGTATATCTCATTCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2183658 127 + 4234846 ttccatactataccatgttttaactcttcttttaaagctgtgcatcctcctcaatgactgtaaattttttaagagAACACACTATTTATAATTTGATGG-------------------------------------------------------------------------TATATATATCCATGTATATCTCATTAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187780 143 - 13750039 ttccatattataccatgtttcaactcttcttttaaagctgtgcatcctcctcaatgactgtaaattttttaagagaacacaccatttataattTGATGGC-----------atatatatatatata----------------------------------------------tatgtgtgtgtgtgtatatCTCATTAAA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20743544 123 - 38779656 ccccatatcacaccactttctaactcttatctt-aatctgtgcaactactataatggctgtaaa-tttttaagagaatacaccctttctaatttgatggc-----------gcatctatat-------------------------------------------------tgaatgt---------------tcgttaaa i otoGar3.GL873528 C 0 I 4 e proCoq1.NW_012144079v1 1086586 607 + 2694913 I e dasNov3.JH568778 3590916 0 - 6883506 C e micMur3.chr31 19187282 605 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=2712765.000000 s hg38.chr21_KI270874v1_alt 66773 334 + 166743 TGTTGAGTGAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGAC---------------TTCAACAATATGG----CTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAGAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTGTGATGGAATCTCCATTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTAAAATGTATCTTTATTATTATGGAAGTGA---TTTTTTTCCTTTACTGATTTTCTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCC s panTro5.chr21 3691258 335 + 33445071 TGTTGAGTGAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGAC---------------TTCAACAATATGG----CTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTGTGATGGAATCTCCATTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTAAAATGTATCTTTATTATTATGGAAGCGA--TTTTTTTTCCTTTACTGATTTTCTGGTTGGGAAGTATGGGCATTTTCTTTTGTTTTGAACTTACTTCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318160 335 + 46275980 TGTTGAGTGAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGAC---------------TTCAACAATATGG----CTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTGTGATGGAATCTCCATTTTTTTCATGTAAACTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTAAAATGTATCTTTATTATTATGGAAGCGA--TTTTTTTTCCTTTACTGATTTTCTGGTTGGGAAGTATGGGCATTTTCTTTTGTTTTGAACTTACTTCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3257190 335 - 13858734 TGTTGAGTGAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGAC---------------TTCAACAATATGG----CTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAAAAGTTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTGTGATGGAATCTCAATTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTAAAATGTATCTTTATTATTATGGAAATGA--TTTTTTTTCCTTTACTGATTTTCTGATTGGGAAATATGGGCATTTCCTTTTGTTTTGAACTTACTTCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4442301 354 + 32716333 CGTTGAGTGAATAAAATCAGGCTATAATTCTGGCAAAGTATATTAATGTTTTTAAGACTTCAGAATTCAAATTTTCAACAATATGGCTGTCTTTTTAAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCCTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTCCGATGGAATCTCAATTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTCCCAAAATGTATCTTTATTATTATGGAAATGA--TTTTTTTCCCTTTACTGATTTTCTGATTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155395224 355 - 185818997 TGTTCAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATATTAATGTTTTTAAGACTTCAGAGTTCAAGTTTTCAACAGTATACCTGTCTTTTTTAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCTTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGTTTTCTGATGGGTTCTCAATTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTACAATGAATCTTTATTATTATGGAAAGGA-TTTTTTTTTCCTTTACTGATCTTGTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162219787 355 - 192294377 TGTTCAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATATTAATGTTTTTAAGACTTCAGAGTTCAAGTTTTCAACAGTATACCTGTCTTTTTTAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCTTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGTTTTCTGATGGGATCTCAATTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTACAATGAATCTTTATTATTATGGAAAGGA-TTTTTTTTTCCTTTACTGATCTTGTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGCACTTACTTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8700463 356 + 9440265 TGTTCAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATATTAATGTTTTTAAGACTTCAGAGTTCAAGTTTTCAACAGTATACCTGTCTTTTTTAACTTAAGCTGGTTTGACTGAG-TTTTTTATATCTTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGTTTTCTGATGGGATCTCAATTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTACAATGAATCTTTATTATTATGGAAAGGATTTTTTTTTTCCTTTACTGATCTTGTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACCTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8429562 356 + 21915920 TGTTGAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATATTAATGTTTTTAAGACTTCAGAATTCAAGTTTTCAACAGTATGCCTGTCTTTTTAAACTTAAGCTTGTTTGACTGAG-TTTTTTATATCCTTCAAAAGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTCTGATGGGATCTCAATTTTTTTCATGTAAATTCAACGAAAGTAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTACAATGAATCTTTATTATTATGGAAAGGA-TTTTTTTTTCCTTTACTGATCTTGTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15004384 357 - 90373283 TGTTGAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATACTAATGTTTTTAAGACTTCAGAATTCAAGTTTTCAACAGTATGCCTGTCTTTTTAAACTTAAGCTGGTTTGACTGAGTTTTTTTATATCCTTCAAAAGCTTAAAATCCCACCATCTAGAGTTAAAAGGAAATGCTTTCTGATGGGATCTCAATTTTTTTCATGTAAATTCAAGCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTACAATGAATCTTTATTATTATGGAAAGGATTTTTTTTTTCCTTTACTGATCTTCTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2183785 355 + 4234846 TGTTGAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATATTAATGTTTTTAAGACTTCAGAATTCAAGTTTTCAACAGTATGCCTGTCTTTTTAAACTTAAGCTTGTTTGACTGAG-TTTTTTATATCCTTCAAAGGCTTAAAGTCTCACCATCTAGAGTTAAAAGGAAATGCTTTCTGATGGGATCTCAATTTTTTTCATGTAAATTCAATGAAA-TAATTTTAATTTTACACATAAGAGATATTTTGGTCTTCTACAATGAATCTTTATTATTATGGAAAGGA-TTTTTTTTTCCTTTACTGATCTTGTGGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 187923 357 - 13750039 TGTTGAGTAAATAAAATCAGGCTATAAGTCTGGCACAGTATATTAATCTTTTTAAGACTTCAGAATTCAAGTTTTCAACAGTATGCCTGTCTTTTTAAACTTAAGCTGGTTTGACTGAGTTTTTTTATATCCTTCAAAAGCTTAAAGTCCCTCCATCTAGAGTTAAAAGGAAATGCTTTCTGATGGGATCTCAATTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTTACACATAAGAGATATTTTGATCTTCTAAAATGAATCTTTATTATTATGGAAAGGATTTTTTTTATCCTTTACTGATCTTCTAGTTGGGAAATATGGGCATTTTCTTTTGTTTTGAACTTACTTCC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19187887 353 + 47401472 tgttgagtgaatATATTTAGACTATAGTTCTGGCAAAGTATACTAATGTTTTTAAGACTTCAAATTTCAAGGTTTCAACAATATGGCTGTCTTTTTACACTTATGCTGATTTGATTGAG--TTTTTATATACTTCAAGTGCTTAAAGTCTCATCATCTGTAGCCAAAAGGAAATGCTTTTTGATGGAATCCTAGCTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTCACACATTAAAAATATTTTGTTTTTCTAAAATGTATATTCAATATTATGGGGATGA--TTTTTTTTCTTTTATTGATTTTCTGATTGGGAAATATGGGCATTGTCTTTTGTCTTGAACTTACTGCC i micMur3.chr31 I 605 C 0 s proCoq1.NW_012144079v1 1087193 354 + 2694913 tgttaagtgaataaatTTAGACTATAGCTCTGGCAAAGTATACTAATGTTTTTAAGACTTCAAATTTCAAGGTTTCAACAATATGGCTGTCTTTTTACACTTATGCTGATTTGATTGAG--TTTTTATATACTTCGAATGCTTAAAGTCTCATCATCTGTAGCCAAAAGGAAATGTTTTTTGATGGAATCCTAGCTTTTTTCATGTAAATTCAACCAAA-TAATTTTAATTTCACACATAAAAAATATTTTGTTTTTCTAAAATGTATCTTCAATATTATGGGGATGA-TTTTTTTTTCTTTTATTGATTTTCTGGTTGGGAAATATGGGCATTGTCTTTTGTCTTGAACTTACTGCC i proCoq1.NW_012144079v1 I 607 I 40 s otoGar3.GL873528 20743671 333 - 38779656 tgttgagtgaataaatTTAGGCTCTAGTTCTGGCAAAGTACACTAATGTTTTCAAGACTTCAAATTTC-AGGCTTCAACAATATGGCTGTCTCTTTGCATTTA-GCTGCTTTGATTGAG-TTTTTTATATACTTCCACCACTTAAAGTCTCATCATCTGCAGCTGAAAGGAAAGGCTTTCAAATGGAACCCCAGCTTTTTTCATGTAAATTTAACCCAA-TAATTTTAGTTCTATACA--------------------TAAAATGTAGCTTTAATGTTAAGAGGATGA-TTTTTTTTTGATTCATTGATTTTCTGGTTGGGAAATATGGACATTGTCTTTGGTCTTGAATTTATTGCC i otoGar3.GL873528 I 4 C 0 e dasNov3.JH568778 3590916 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=28392.000000 s hg38.chr21_KI270874v1_alt 67107 4 + 166743 TTTT s panTro5.chr21 3691593 4 + 33445071 TTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318495 4 + 46275980 TTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3257525 4 - 13858734 TTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4442655 4 + 32716333 TTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155395579 4 - 185818997 TTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220142 4 - 192294377 TTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8700819 4 + 9440265 TTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8429918 4 + 21915920 TTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15004741 4 - 90373283 TTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184140 4 + 4234846 TTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188280 4 - 13750039 TTTT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19188240 4 + 47401472 TTTT i micMur3.chr31 C 0 I 36 e proCoq1.NW_012144079v1 1087547 40 + 2694913 I e dasNov3.JH568778 3590916 0 - 6883506 C e otoGar3.GL873528 20744004 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=237616.000000 s hg38.chr21_KI270874v1_alt 67111 39 + 166743 CTTTACGTGGTGGATTCAGCCTAAACATAAAATAAAAGT- s panTro5.chr21 3691597 39 + 33445071 CTTTACGTGGTGGATTCAGCCTAAACATAAAATAAAAGT- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318499 39 + 46275980 CTTTACGTGGTGGATTCAGCCTAAACATAAAATAAAAGT- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3257529 39 - 13858734 CTTTACGTGGTGGATTCAGCCTAAACTTAAAATAAAAGT- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4442659 39 + 32716333 CTTTATATGGTGGATTCATCCTAAACATAAAATAAAAGT- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155395583 39 - 185818997 CTTTAAGTGGTAGATTCAACCTAAACCTAAAATAAAAGT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220146 39 - 192294377 CTTTAAGTGGTAGATTCAGCCTAAACCTAAAATAAAAGT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8700823 39 + 9440265 CTTTAAGTGGTAGATTCAGCCTAAACCTAAAATAAAAGT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8429922 39 + 21915920 CTTTAAGTGGTAGATTCAGCCTAAACCTAAAATAAAAGT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15004745 39 - 90373283 CTTTAAGTGGTAGATTCAGCCTAAACCTAAAATAAAAGT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184144 39 + 4234846 CTTTAAGTGGTAGATTCAGCCTAAACCTAAAATAAAAGT- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188284 39 - 13750039 CTTTAAGTGGTAGATTCAGCCTAAACCTAAAATAAAAGT- i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20744004 40 - 38779656 CTTTAATTGGTAGATTTAGCCTACAACTAGAGTAAAAGAA i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1087547 40 + 2694913 I e dasNov3.JH568778 3590916 0 - 6883506 C e micMur3.chr31 19188244 36 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=1101653.000000 s hg38.chr21_KI270874v1_alt 67150 150 + 166743 TAAGAGAGATAGAATCAAT-CATCAGGGAATAAAACAGAGAAAGAAATCAACAAACATGTCCTTCC-TTTTTTTTCTATGAATGATATAG-TGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAG-----TTCTCTTATG s panTro5.chr21 3691636 151 + 33445071 TAAGAGAGATAGAATCAAT-CATCAGGGAATAAAACAGAGAAAGTAATCAACAAACATGTCCTTCCTTTTTTTTTCTATGAATGATATAG-TGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAG-----TTCTCTTATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318538 151 + 46275980 TAAGAGAGATAGAATCAAT-CATCAGGGAATAAAACAGAGAAAGTAATCAACAAACATGTCCTTCCTTTTTTTTTCTATGAATGATATAG-TGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAG-----TTCTCTTATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3257568 150 - 13858734 TAAGAGAGATAGAATCAAT-CATCAGGTAATAAAACAGAGAAAGTAATCAACAAACATGTCCTTCC-TTTTTTTTCTATGAATGATATAG-TGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAG-----TTCTCTTATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4442698 151 + 32716333 TAAGAGAGATAGAATCAAT-CATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTTCCTTTTTTTTTCTATGAATGATATAG-TGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCCAAGTAG-----TTCTCTTATG i nomLeu3.chr25 C 0 I 1563 s rheMac8.chr3 155395622 149 - 185818997 TAAAAGAGATAGAATCAAC-CATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTCCC--TTTTTTTCTATGAATGATATTG-TGAACAGAAATCAGGCCAATAACAAGGAAAAAGACTTAATGAATCAAAGTAG-----TTCTCTTAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220185 149 - 192294377 TAAAAGAGATAGAATCAAC-CATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTCCC--TTTTTTTCTATGAATGATATTG-TGAACAGAAATCAGGCCAATAACAAGCAAAAAGACTTAATGAATCAAAGTAG-----TTCTCTTAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8700862 149 + 9440265 TAAAAGAGATAGAATCAAC-CATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTCCC--TTTTTTTCTATGAATGATATTG-TGAACAGAAATCAGGCCAATAACAAGCAAAAAGACTTAATGAATCAAAGTAG-----TTCTCTTAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8429961 149 + 21915920 TAAAAGAGATAGAATCAAC-CACCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTTCC--TTTTTTTCTATGAATGATATCG-TGAACAGAAATCAGGCCAAAAACAAGCGAAATGACTTAATGAATCAAAGTAG-----TTCTCTTAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15004784 149 - 90373283 TAAAAGAGATAGAATCAAC-CACCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTTCC--TTTTTTTCTATGAATGATATAG-TGAACAGAAATCAGGCCAAAAACAAGCGAAATGACTTAATGAATCAAAGTAG-----TTCTCTTAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184183 149 + 4234846 TAAAAGAGATAGAATCAAC-CACCAGAGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTTCC--TTTTTTTCTATGAATGATATCG-TGAACAGAAATCAGGCCAAAAACAAGCAAAATGACTTAATGAATCAAAGTAG-----TTCTCTTAAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188323 149 - 13750039 TAAAAGAGATAGAATCAAC-CATCAGGGAATAAAATAGAGAAAGTAATCAACAAACATGTCCTTCC--TTTTTTTCTATGAATGATATAG-TGAACAGAAATCAGGACAATAACAAGCAAAATGACTTAATGAATCAAAGCAG-----TTCTCTTAAG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19188280 153 + 47401472 TAAAAGAGACATAAGCAATACATCTAGGAATAAAACAGA-AAAGTAATCAATGAATA--TTCTTTC--TGTTGTTCTGTGAATGATATAGTTGAGCAGAAATCAAGACAGTAACAAGCAGAGTGATTTAATCAAACAAAGTAGGGTTTTTTTTTTGTT i micMur3.chr31 I 36 C 0 s proCoq1.NW_012144079v1 1087587 148 + 2694913 TAAAAGAGACATAAGCAATCCATCTGGGAACAAAACAGA-AAAGTAATCAATGAACA--TTCTTTC--TCTTGTTCTGTGAATGATATAGCTGAGCAGAAATCAAGACAGTAACAAGCAGAGTGATTTAATGAATCAAAGTAG-----TTTTTTTGTT i proCoq1.NW_012144079v1 I 40 C 0 s otoGar3.GL873528 20744044 148 - 38779656 TAAAAGAGATATGAGCCATCCATCTGGAAAAAAATAGAA-AAAGTAATCAACGAACA--TTCCTTC--TCTTGTTCTGTGAACGATATAGCTGAGCAGAAATCAAGATAGCAGCAAGTAGAGTGATTAAATGAATCAAAGTAG-----ATTTCTTGTT i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3590916 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=934811.000000 s hg38.chr21_KI270874v1_alt 67300 141 + 166743 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATATTCAATACAG---TTGTGAACGCTCCATGTATGAAAAATTGTGTATGGT---ATAATTCAGAAATAAAGGC-CAAAGCTCCACTAAGTTAAAATTGGCTAGAGT s panTro5.chr21 3691787 141 + 33445071 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTGTGAACGCTCCATGTATGAAAAATTGTGTATGGT---ATAATTCAGAAATAAAGGC-CAAAGCTCCACTAAGTTAAACTTGGCTAGAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318689 141 + 46275980 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTGTGAACGCTCCATGTATGAAAAATTGTGTATGGT---ATAATTCAGAAATAAAGGC-CAAAGCTCCACTAAGTTAAACTTGGCTAGAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3257718 141 - 13858734 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTGTGAACGCTCCATGTATGAAAAATTGTATATGGT---ATAATTCAGAAATAAAGGC-CAAAGCTCCACTAAGTTCAACTTGGCTAGAGT i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155395771 141 - 185818997 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTATGAACCCTCCATGTATAAAAAATTGTGTACAGT---GTAATTCAGAAATAAAGAC-CAAAGTTCCACTAACTTCAACTTGGCTAGAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220334 141 - 192294377 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTATGAACCCTCCATGTATAAAAAATTGTGTACAGT---GTAATTCAGAAATAAAGAC-CAAAGTTCCACTAACTTCAACTTGGCTAGAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701011 141 + 9440265 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTATGAACCCTCCATGTATAAAAAATTGTGTACAGT---GTAATTCAGAAATAAAGAC-CAAAGTTCCACTAACTTCAACTTGGCTAGAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430110 141 + 21915920 TTGGCTTAGAATTATAGCATATTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTGTGAACACTCCATGTATGAAAAATTGTGTACAGT---GTAATTCAGAAATAAAGAC-CAAAGCTCCACTAACTTCAACTTGGCTAGAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15004933 141 - 90373283 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTATGAACCCTCCATGTATGAAAAATTGTGTACAGT---ATAATTCAGAAACAAAGAC-CAAAGCTCCACTAACTTCAACTTGACTAGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184332 141 + 4234846 TTGGCTTAGAATTATAGCATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTGTGAACACTCCATGTATGAAAAATTGTGTACAGT---GTAATTCAGAAATAAAGAC-CAAAGCTCCACTAACTTCAACTTGGCTAGAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188472 141 - 13750039 TTGGCTTAGAACTATAACATGTTGAATCCAATGAGTGA-------------------------------TTAATTTTCAATACAG---TTGTGAACTCTCCATGTATGAAAAATTGTGTACAGT---GTAACTCAGAAATAAAGGC-CAAAGCTCCACTAACTTCAACTTGGCTAGAGT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19188433 146 + 47401472 TTGGCTTAGAATCACAGTGTGTTGAATCCAATGAACCAT------------------------------TTACTTTTCAATACAGTTTTTGTAAACTCTCCATTTATGCAAAATTATGTATAAC---AGAATTTAGAAATAAAGTCTCAAAGCTCTACTAAGTTCAGCTTGGCTAGAGT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1087735 145 + 2694913 TTGGCTTAGAATCACAATGTGTTGAATCCAATGAACCG-------------------------------CTACTTTTCAATACAG---TTGTAAACTCTCCGTTTATGCAAAATTATGTATAACGTGAGAATTCAGAAATGAAGTCCCAAAGCTCTACTAAGTTCATCTTGGCTAGAGT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20744192 164 - 38779656 TACGCTTAAAATCATAGTGTGTTGAATCCAATGAATCATTCATTTTCTTTCTTTTTTTTTTTTTAGCCACTAATTTTCAATACAG---TTGTAAATTCTCCATCCATACA-----ATGTG-------AGGATTCAGAAATAAAGCCCCAAAGCTCTACTAAGTTCAGCTTGGCTAGATT i otoGar3.GL873528 C 0 I 282 e dasNov3.JH568778 3590916 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=659634.000000 s hg38.chr21_KI270874v1_alt 67441 94 + 166743 TGCACTAGATTTAAACTA-TTAAAAAATTCACAAAACTTAACCCAGTTTTATATATGACACCCAAACTTTGCACTGGTCAAATTTTGTCTTAAAA s panTro5.chr21 3691928 94 + 33445071 TGCACTAGATTTAAACTA-TTAAAAAATTCACAAAACTTAACCCAGTTTTATATATGACACCCAAACTTTGCACTGGTCAAATTTTGTCTTAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318830 94 + 46275980 TGCACTAGATTTAAACTA-TTAAAAAATTCACAAAACTTAACCCAGTTTTATATATGACACCCAAACTTTGCACTGGTCAAATTTTGTCTTAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3257859 94 - 13858734 TGCACTAGATTTAAACTA-TTAAAAAATTCACAAAACTTCACCCAGTTTTATATATGACACCCAAACTTTGCACTGGTCAAATTTTGTCTTAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155395912 95 - 185818997 TGCACTAGATTTAAACTATTTAAAAAATTCATAAAATTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTTAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220475 95 - 192294377 TGCACTAGATTTAAACTATTTAAAAAATTCATAAAATTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTTAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701152 95 + 9440265 TGCACTAGATTTAAACTATTTAAAAAATTCATAAAATTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTTAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430251 95 + 21915920 TGCACTAGATTTAAACTATTTAAAAAATTCATAAAACTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005074 95 - 90373283 TGCACTAGATTTAAACTATTTTTAAAATTCATAAAACTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184473 95 + 4234846 TGCACTAGATTTAAACTATTTAAAAAATTCATAAAACTTCACCCAGTTTTGTATATGACACCCAAACTTTGCACTGGTCAAATTTCATCTTAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188613 95 - 13750039 TGCACTAGATTTAAACTATTTAAAAAATTCACAGAACTTCACCCAGTTTTATATATGACACCCAAACTTTGCACTGGTCAAATTTTGTCTTAAAA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19188579 94 + 47401472 TGCACTAGATTTAAACTA-TTAAAAAATTCACAAAACTTCATCCCTTTTAGTATATGACACCCAAATTTTCCACTTGTCAAATTTTACCTTAAAA i micMur3.chr31 C 0 I 97 s proCoq1.NW_012144079v1 1087880 94 + 2694913 TGCACTAGATTTAAAGTA-TTAAAAAATTCTCAAAACTTCACCCCATTTTGTATATGATACCCAAATTTTGCACTTGTTAAATTTTACCTTAAAA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20744638 92 - 38779656 tgccATAGATATAAATTA-TT-AAAAATGCACAAAACTTCACCCAGTATTATATATGACACCCAAA-TTTGCACCCATCAAATTTTACCTTAAAA i otoGar3.GL873528 I 282 C 0 e dasNov3.JH568778 3590916 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=245810.000000 s hg38.chr21_KI270874v1_alt 67535 56 + 166743 ATGTGAGGGTTGGAGCTGTTTCTTACAACTT-AAGC--TATATGTAGACAAATAGCTTC s panTro5.chr21 3692022 56 + 33445071 ATGTGAGGGCTGGAGCTGTTTCTTACAACTT-AAGC--TATATGTAGACAAATAGCTTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318924 56 + 46275980 ATGTGAGGGCTGGAGCTGTTTCTTACAACTT-AAGC--TATATGTAGACAAATAGCTTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3257953 56 - 13858734 ATGTGAGGGCTGGAGCTGTTTCTTACAACTT-AAGC--TATATGTAGACAAATAGCTTC i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396007 55 - 185818997 ATGTGAGGGCTGAACCTCTTTCTTACAACTG-AAGC--TATAGGTAGAC-AATAGCTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220570 55 - 192294377 ATGTGAGGGCTGAACCTCTTTCTTACAACTG-AAGC--TATAGGTAGAC-AATAGCTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701247 55 + 9440265 ATGTGAGGGCTGAACCTCTTTCTTACAACTG-AAGC--TATAGGTAGAC-AATAGCTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430346 56 + 21915920 ATGTGAGGACTGAACCTCTTTCTTACAACTT-AAGC--TATAGGTAAACAAATGACTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005169 56 - 90373283 ATATGCGGGCCGAACCTCTTTCTTACTACTT-AAGC--TATAGGTAAACAAATAACTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184568 56 + 4234846 ATGTGAGGACTGAACCTCTTTCTTACAACTT-AAGC--TATAGGTAAACAAATGACTTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188708 58 - 13750039 ATGTGAAGGCTGAAGCTGTTTCTTACAACTT-AAGCTATATAGGTAGACAAATAGCTTC i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1087974 52 + 2694913 TTGGGAGGGCAGGAG-GGTTTCTTATGATTTGAAAC--TACAGGTAGAC----AAGTTG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20744730 52 - 38779656 TTAAGATAGCAGAAG-GGTTTCTTACAACTTAAAAC--TACAGGTAGAC----AATCTG i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3590916 0 - 6883506 C e micMur3.chr31 19188673 97 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=334222.000000 s hg38.chr21_KI270874v1_alt 67591 55 + 166743 ATCAGTCCACATAATATTCCCATTGTT-TTAATGTTGTGGGCTACATCTGGAGCTA s panTro5.chr21 3692078 55 + 33445071 ATCAGTCCACATAATATTCCCATTGTT-TTAATGTTGTGGGTTACATCTGGAGCTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17318980 55 + 46275980 ATCAGTCCACATAATATTCCCATTGTT-TTAATGTTGTGGGTTACATCTGGAGCTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258009 55 - 13858734 ATCAGTCCACATAATATTCCCATTGTT-TTAATGTTGTGGGCTACACCTGGGGCTG i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396062 55 - 185818997 ATCGGTCCACAGAACATTCCCATTGTT-TTAATGCTGTGGGCTACCTCTGGGGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220625 55 - 192294377 ATCGGTCCACAGAACATTCCCATTGTT-TTAATGCTGTGGGCTACCTCTGGGGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701302 55 + 9440265 ATCGGTCCACAGAACATTCCCATTGTT-TTAATGCTGTGGGCTACCTCTGGGGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430402 55 + 21915920 ATCAGTCCACAGAACATTCCCATTGTT-TTAATGCTGTGGGCTACCTCTGGGGCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005225 55 - 90373283 ATCAGTCCACAGAACATTCCCATTGTT-TTAATGCTATGGGCTACCTCTGGGGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184624 55 + 4234846 ATCAGTCCACAGAACATTCCCATTGTT-TTAATGCTGTGGGCTACCTCTGGGGCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188766 55 - 13750039 ATCAGTCCACAGAACATTCCCATTGTT-TTAATGCTGTGGGCTACATCTGGGGCTG i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1088026 45 + 2694913 ATCAGTTCACAGGATATTCCCATTGTT-TTAACATTGGGAAGTAAA---------- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20744782 55 - 38779656 ATCGCTGCACAGAATAGTCCCTTTATT-TTAACATTGGAAAGGAAATCTGGGGCTA i otoGar3.GL873528 C 0 I 2 s dasNov3.JH568778 3590916 56 - 6883506 ATCAGTCTACAGGATATTTCCATTATTGTTGTTGTTGTGGAGTAAATCTGGGGCTA i dasNov3.JH568778 C 0 I 2 e micMur3.chr31 19188673 97 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=254990.000000 s hg38.chr21_KI270874v1_alt 67646 31 + 166743 TCAGAATAAATCTGAATACTGCTTCAAGCTG s panTro5.chr21 3692133 31 + 33445071 TCAGAATAAATCTGAATACTGCTTCAAGCTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319035 31 + 46275980 TCAGAATAAATCTGAATACTGCTTCAAGCTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258064 31 - 13858734 TCAGAATAAATCTGAATACTGCTTCAAGCTG i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396117 31 - 185818997 TCAGAATAAATCTGAATACTGCTTCAAGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220680 31 - 192294377 TCAGAATAAATCTGAATACTGCTTCAAGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701357 31 + 9440265 TCAGAATAAATCTGAATACTGCTTCAAGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430457 31 + 21915920 TCAGAATAAATCTGAATACTGCTTCAAGCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005280 31 - 90373283 CCAGAATAAATCTGAATACTGCTTCAAGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184679 31 + 4234846 TCAGAATAAATCTGAATACTGCTTCAAGCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188821 31 - 13750039 TCAGAATAAATCTGAATACTGCTTAAAGCTG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19188770 31 + 47401472 TCAGAATAAATCTGAATGCTGCTTCAAGATG i micMur3.chr31 I 97 C 0 s proCoq1.NW_012144079v1 1088071 31 + 2694913 TCAGAATAAATCTGAAAGTTGCTTCAAGATG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20744839 31 - 38779656 TCACAATAAATCCAAATGCTGCTTCAAGCTG i otoGar3.GL873528 I 2 I 34 s dasNov3.JH568778 3590974 30 - 6883506 TCAGAATGAA-CTGAATAATTCTATACTCTG i dasNov3.JH568778 I 2 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=78971.000000 s hg38.chr21_KI270874v1_alt 67677 11 + 166743 GGGGTGTAAGC s panTro5.chr21 3692164 11 + 33445071 GGGGTGTAAGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319066 11 + 46275980 GGGGTGTAAGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258095 11 - 13858734 GGGGAGTAAGC i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396148 11 - 185818997 GGGGAGTAAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220711 11 - 192294377 GGGGAGTAAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701388 11 + 9440265 GGGGAGTAAGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430488 11 + 21915920 GGGGAGTAAGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005311 11 - 90373283 GGGGAGTAAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184710 11 + 4234846 GGGGAGTAAGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188852 11 - 13750039 GGGGAGTAAGC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19188801 11 + 47401472 GGAGAGTAAGC i micMur3.chr31 C 0 I 90 s proCoq1.NW_012144079v1 1088102 11 + 2694913 GTGAAGTAAGC i proCoq1.NW_012144079v1 C 0 C 0 s dasNov3.JH568778 3591004 11 - 6883506 AGAAAGTAAGC i dasNov3.JH568778 C 0 C 0 e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=511071.000000 s hg38.chr21_KI270874v1_alt 67688 97 + 166743 TAACACCACAAAGAATCTGGCTCACTGTAGGAAGGC-CAGGACTCGCAAAAGGCCAGG----------TGACAGTGAAGCAGGC----------------------TTGAAAGCATAAGAGTGTCATGTT s panTro5.chr21 3692175 97 + 33445071 TAACACTGCAAAGAATCTGGCTCACTGTAGGAAGGC-CAGGACTCGCAAAAGGCCAGG----------TGACAGTGAAGCAGGC----------------------TTGAAAGCATAACAGTGTCATGTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319077 97 + 46275980 TAACACTGCAAAGAATCTGGCTCACTGTAGGAAGGC-CAGGACTCGCAAAAGGCCAGG----------TGACAGTGAAGCAGGC----------------------TTGAAAGCATAAGAGTGTCATGTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258106 97 - 13858734 TAAGACCACAAAGAATCTGGCTCACTGTAGGAAGGC-CAGGACTCGCAAAAGGCCAGG----------TGACAGTGAAGCAGGC----------------------TTGAAAGCATAAGAGTGTCATGTT i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396159 97 - 185818997 TAAGGCCGCAAAGAATTTGGCTCACTGTAGGAAGGC-CAGGACTCACAAAAGGCCAGG----------TGACAGTGGAGCAGGC----------------------TTGAAGGCCTAGAAGTCTCATGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220722 97 - 192294377 TAAGGCAGCAAAGAATTTGGCTCACTGTAGGAAGGC-CAGGACTCACAAAAGGCCAGG----------TGACAGTGGAGCAGGC----------------------TTGAAGGCCTAGGAGTCTCATGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701399 97 + 9440265 TAAGGCCACAAAGAATTTGGCTCACTGTAGGAAGGC-CAGGACTCACAAAAGGCCAGG----------TGACAGTGGAGCAGGC----------------------TTGAAGGCCTAGGAGTCTCATGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430499 97 + 21915920 TAAGGCTGCAAAGAATTTGGCTCACTGTAGGAAGGC-CAGGACTTACAAAAGGCCAGG----------TGACAGTGGAGCAGGC----------------------TTGAAGGCCTAGGAGTCTCATGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005322 97 - 90373283 TAAGGCCGCAAAGAATTTGGCTCACTGTAGGAAGGC-CAGGACTCGCAAAAGGCCAGG----------TGACAGTGGAGCAGGC----------------------TTGAAGGCCTAGGAGTCTCATGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184721 97 + 4234846 TAAGGCTGCAAAGAATTTGGCTCACTGTAGGAAGGC-CAGGACTCACAAAAGGCCAGG----------TGACAGTGGAGCAGGC----------------------TTGAAGGCCTAGGAGTCTCATGTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188863 97 - 13750039 TAAGGCCGCAAAGAATCTGACTCACTGTAGGAAGGC-CAGGACTTACAAAAGGCCAGG----------TGGCAGTGGAGCAGGC----------------------TTCAAGGCCTAAGAGTCTCATGTT i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1088113 91 + 2694913 TAAGGCCCCAAAGAAGCCGACTCACTGTAGCAGGGC-CAGGATTGGTGGATGCCCAAG----------TGACAGTGAAGCAG----------------------------ATGTTGAAGAGTATCACATC i proCoq1.NW_012144079v1 C 0 C 0 s dasNov3.JH568778 3591015 130 - 6883506 TAATACCCCAAAGAAACTGGCTTCTTGTGGCAAGGTGTAGAGTGGGCAGATGATCAGGCTGTAGAAGATAATAATAAAGCCAGCATTCAGAGGGTCTATCAGGGTATAGAAGGCATAAGGGTATCATGCC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19188812 90 + 47401472 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=462250.000000 s hg38.chr21_KI270874v1_alt 67785 65 + 166743 CCTTGTTCATTTCATACCCTACTAATGTTTCCATTCATGTG--TGAGCCCCAGCAGCAGAAAATCTA s panTro5.chr21 3692272 65 + 33445071 CCTTGTTCATTTCATACCCTACTAATGTTTCCATTCATGTG--TGAGCCCCAGTAGCAGAAAATCTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319174 65 + 46275980 CCTTGTTCATTTCATACCCTACTAATGTTTCCATTCATGTG--TGAGCCCCAGTAGCAGAAAATCTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258203 65 - 13858734 CCTTGTTCGTTTCATACCCTACTAATGTTTCCATTCATGTG--TGAGCCCCAGTAGCAGAAAATCTA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396256 65 - 185818997 CCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTG--TGAGCCTCAGTAGCAGAAAATCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220819 65 - 192294377 CCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTG--TGAGCCTCAGTAGCAGAAAATCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701496 65 + 9440265 CCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTG--TGAGCCTCAGTAGCAGAAAATCTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430596 65 + 21915920 CCTTATTCGTTTCATATCCTACTAATGTATCCATTCATGTG--TGAGCCTCAGTAGCAGAAAATCTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005419 65 - 90373283 CCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTG--TGAGCCTCAGTAGCAGAAAATCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184818 65 + 4234846 CCTTATTCGTTTCATACCCTACTAATGTATCCATTCATGTG--TGAGCCTCAGTAGCAGAAAATCTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 188960 63 - 13750039 CCTTATTGGTTTCATACCCTACTTATGTATCCATTCATGTG--TGAGCCTCAGTAGCAGAAAATC-- i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19188902 65 + 47401472 CCTTGTCCCTTTCCTACCCTACTAATGTATCCATTCATGTG--TGAGTCCCAGCAACAGAAAATCTA i micMur3.chr31 I 90 I 199 s proCoq1.NW_012144079v1 1088204 65 + 2694913 CCTTGTCCCTTTCCTCCCCTACTAATGTATCCATTCATGCA--TGAGTCCCAGCAGCAGAAAATCCA i proCoq1.NW_012144079v1 C 0 C 0 s dasNov3.JH568778 3591145 66 - 6883506 -CTTTATCCTTTCATACTTTGCTAATGTATCCATTCACATGACTGAGACCCAGTAGCAGGAAATCCA i dasNov3.JH568778 C 0 C 0 e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=1052591.000000 s hg38.chr21_KI270874v1_alt 67850 204 + 166743 GTAGAACATAGAGATAGAGAGTGCCAACATTTCA---TCAGGTGAGCAGCAGTCATATTCAGATACCTTTCCAGTATAAGCGGGATCGGCCAGCATTCTGTAAGGAGAGGAGGAAAGAATAGGCCCTG-ATGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAA-TCAACAGC----CACTTAGG----GCCTTTGCTGAAAAGGAGGA s panTro5.chr21 3692337 204 + 33445071 GTAGAACATAGAGATAGAGAGTGCCAACATTTCA---TCAGGTGAGCAGCAGTCATATTCAGATACCTTTCCAGTATAAGCAGGATCAGCCAGCATTCTGTAAGGAGAGGAGGGAAGAATAGGCCTTG-ATGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAA-TCAACAGC----CACTTAGG----GCCTTTGCTGAAAAGGAGGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319239 204 + 46275980 GTAGAACATAGAGATAGAGAGTGCCAACATTTCA---TCAGGTGAGCAGCAGTCATATTCAGATACCTTTCCAGTATAAGCAGGATCGGCCAGCATTCTGTAAGGAGAGGAGGGAAGAATAGGCCCTG-ATGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAA-TCAACAGC----CACTTAGG----GCCTTTGCTGAACAGGAGGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258268 204 - 13858734 GTAGAACATAGAGATAGAGAGTGCCAACATTTCA---TCAGGCGAGCAGCAGTCATATTCAGATACCTTTCCAGTATAAGCAGGATCGGCCAGCATTCTGTAAGGAGAGGAGGGAAGAATAGGCCCTG-ATGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAA-TCAACAGC----CACTTAGG----GCCTTTGCTGAAAAGGAGGA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396321 202 - 185818997 GAAGAACATAGAGATAGAGAGTGCCAACATTTCC---TCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGT-GGATTGGCCAGCATT-TACAAGCAGAGGAGGGAAGAATAGGCCCTG-AGGCAGAGATCAGAAAGCTCTAAGAAGATTCCCAGCCAAGGAA-CCAATAGC----CACTTAGG----GCCTTTGCGGAAAAGGAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162220884 202 - 192294377 GAAGAACATAGAGATAGAGAGTGCCAACATTTCC---TCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGC-GGATTGGCCAGCATT-TACAAGCAGAGGAGGGAAGAATAGGCCCTG-AGGCAGAGATCAGAAAGCTCTAAGAAGATTCCCAGCCAAGGAA-CCAATAGC----CACTTAGG----GCCTTTGCGGAAAAGGAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701561 199 + 9440265 GAAGAACATAGAGATAGAGAGTGCCAACATTTCC---TCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGC-GGATTGGCCAGCATT-TACA---AGAGGAGGGAAGAATAGGCCCTG-AGGCAGAGATGAGAAAGATCTAAGAAGATTCCCAGCCAAGGAA-CCAATAGC----CACTTAGG----GCCTTTGCGGAAAAGGAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430661 202 + 21915920 GAAGAACATAGAGATAGAGAGTGCCAACATTTCC---TCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGC-GGATTGGCCAGCATT-TACAAGCAGAGGAGGGAAGAATAGGCCCTG-AGGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGGAA-CCAATAGC----CACTTAGG----GCCTTTGCTGAAAAGGAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005484 202 - 90373283 GAAGAACATAGAGATAGAGAGTGCCAACATTTCC---TCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGC-AGATCGGTCAGCATT-TACAAGCAGAGGAGGGAAGAATAGGCCCTG-AGGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAA-CCAATAGC----CACTTAGG----GCCTTTGCTGAAAAGAAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2184883 202 + 4234846 GAAGAACATAGAGATAGAGAGTGCCAACATTTCC---TCAAGTGAGCAGCAGTCATATTCAGATAACTTCCCAGTATAAGC-GGATTGGCCAGCATT-TACAAGCAGAGGCGGGAAGAATAGGCCCTG-AGGCAGAGATCAGAAAGATCTAAGAAGATTCCCAGCCAAGAAA-CCAATAGC----CACTTAGG----GCCTTTGCTGAAAAGGAGGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189023 194 - 13750039 ----------AAAATAGAGAGTGCCAACATTTCC---TCAGGTGAGCAGCAGTCACATTCAGATAACTTACCAGTATAAGCAGGATCGGCCAGCATTCTACAAGCAGAGGAGGGAAGAATAGGCCCTG-AGGCAGAGATCAGAAAGATCTAAAAAGACTCCCAGCCAAGAAA-CCAATAGC----CACTTAGG----GCCTTTGCTGAAAAGGAGGA i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1088269 209 + 2694913 GCAGTGCACAGAGAAAGACAGTGCCAATGATTCAAAGTCAGGTGAGCAGCAGTCATTGTCAGATATCTATCCAAGTTAAGCAGGACAAATTAGCTTC---CTAGAAGAGGTGAGAAGAATTGGCCCTG-AAGCAGAGATCTGAAAGATCTAAGTAGGTTTCCAGCCAATAGATCCAACAGCAATTCAGTTAGA----GCCCTTACTGTAAAAGAGAC i proCoq1.NW_012144079v1 C 0 C 0 s dasNov3.JH568778 3591211 212 - 6883506 TGAATACACTGATACAGGCGGTGCCAATTGTTGGAAGTTGGGTAAGCATCAGTCATTGCCAGATACCTTTCCGTGTTTTGTTTGAACAGCCAACATCTTGTAATGCAAAGTGGAAAGGATTTTCCTGGAATAAAGGGACTCAAAATATCTAGGCAGGTCCCAATCAATAGAT-CCAGTAGC----AGTTTAGGTAGAGCTCTTATTTTAAAAGAGGC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19188967 199 + 47401472 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=632609.000000 s hg38.chr21_KI270874v1_alt 68054 95 + 166743 CAAGGGAATTGCTGAATTGTCCCCAATAGG-ATGTTTATGTTAGAGATTCT-----GAAAAAG--AGCCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTACTG s panTro5.chr21 3692541 95 + 33445071 CAAGGGAATTGCTGAATTGTCTCCAATAGG-ATGTTTATGTTAGAGATTCT-----GAAAAAC--AGCCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTACTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319443 95 + 46275980 CAAGGGAATTGCTGAATTGTCTCCAATAGG-ATGTTTATGTTAGAGATTCT-----GAAAAAC--AGCCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTACTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258472 94 - 13858734 CAAGGGAATTGCTGAATTGTCTCCAATAGG-ATGTTTATGTTAGAGATTCT-----GAAAAAC--AGCCAAGGCTGACTT-ATGGCAAGAAAGTC-TCCTACTG i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396523 95 - 185818997 CAGGGGAATTACTGAATTGTCTCCAATAGG-ATGTTTATGTTAGAGATTCT-----GAAAAAG--AACCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTATTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221086 95 - 192294377 CAGGGGAATTACTGAATTGTCTCCAATAGG-ATGTTTATGTTAGAGATTCT-----GAAAAAG--AACCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTATTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701760 95 + 9440265 CAGGGGAATTACTGAATTGTCTCCAATAGG-ATGTTTATGTTAGAGATTCT-----GAAAAAG--AACCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTATTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430863 95 + 21915920 CAGGGGAATTACTGAATTGTCTCCAATAGG-ACGTTTATGTTAGAGATTCT-----GAAAAAC--AGCCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTACTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005686 95 - 90373283 CAGGTGAATTACTGAATTGTCTCCAATAGG-ACGTTTATGTTAGAGATTCT-----GAAAAAG--AGCCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185085 98 + 4234846 CAGGGGAATTACTGAATTGTCTCCAATAGGAATGTTTATGTTAGAGATTCT-----GAAAAAAACAGCCAAGGCTGACTT-ATGGCAAGAAAGTCTTCCTACTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189217 96 - 13750039 CAGGGGAATTACTGAATTGTCTCCAATAGG-ATGTTTATGTTAGAGATTCT-----GAGAAAG--AGCCAAGGCTGACTTAACGGCAAGAAAGTCTTCCTGCTG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19189166 95 + 47401472 CAAGGGAATTATTGAATTATCTCCTAAAGG-ACATTTATATTTGAGATTTT-----GAAAAAG--AGTCAAGGCTGATTT-ACGTCAAGAAAGTCTTCCTACTG i micMur3.chr31 I 199 I 321 s proCoq1.NW_012144079v1 1088478 95 + 2694913 CAAGGGAATTACCGAATTATCTAAAATAGG-ATGTTTATATTAGATATTTT-----GAAAAAG--AGCCAAGGCTGATTT-ATGTAACGAAAATCTTCCTACTG i proCoq1.NW_012144079v1 C 0 C 0 s dasNov3.JH568778 3591423 95 - 6883506 CAGAGGAATTACTGAATTAG----GACAGG-ATA-TTATGGCAGAGATTCTAGGTGGGGGGAA--TGCCAAAGCTCATTT-ATGTCAAGATGACCTTCTTAATG i dasNov3.JH568778 C 0 C 0 e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=122210.000000 s hg38.chr21_KI270874v1_alt 68149 19 + 166743 GACTCTAGTGAATAATGTT s panTro5.chr21 3692636 19 + 33445071 GACTCCAGTGAATAATGTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319538 19 + 46275980 GACTCCAGTGAATAATGTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258566 19 - 13858734 GACTCTAGTGAATAATGTC i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396618 19 - 185818997 GACTCTAGTGAATAATGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221181 19 - 192294377 GACTCTAGTGAATAATGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701855 19 + 9440265 GACTCTAGTGAATAATGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430958 19 + 21915920 GACTCTAGTGAATAATGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005781 19 - 90373283 GACTCTAGTGAATAATGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185183 19 + 4234846 GACTCTAGTGAATAATGTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189313 19 - 13750039 GACTCTAGTGAATAATGTT i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1088573 19 + 2694913 GATTCtagtggagaatgtt i proCoq1.NW_012144079v1 C 0 I 720 s dasNov3.JH568778 3591518 19 - 6883506 GATTCCAGTGGATAATATT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19189261 321 + 47401472 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=23771.000000 s hg38.chr21_KI270874v1_alt 68168 4 + 166743 GTGT s panTro5.chr21 3692655 4 + 33445071 GTGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319557 4 + 46275980 GTGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258585 4 - 13858734 GTGT i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396637 4 - 185818997 GTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221200 4 - 192294377 GTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701874 4 + 9440265 GTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430977 4 + 21915920 GTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005800 4 - 90373283 GTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185202 4 + 4234846 GTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189332 4 - 13750039 GTGT i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3591537 4 - 6883506 GTAT i dasNov3.JH568778 C 0 I 789 e proCoq1.NW_012144079v1 1088592 720 + 2694913 I e micMur3.chr31 19189261 321 + 47401472 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=184173.000000 s hg38.chr21_KI270874v1_alt 68172 38 + 166743 ATGtgagaactctgcagcaactgcatcacagaacggta s panTro5.chr21 3692659 38 + 33445071 ATGtgagaactctgcagcaactgcatcacagaacggta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319561 38 + 46275980 ATGtgagaactctgcagcaactgcatcacagaacggta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258589 38 - 13858734 ATGtgagaactctgcagcaactgcatcacagaacggtg i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396641 38 - 185818997 ATGtgagaactctgcagcaactgcatcacagagcaatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221204 38 - 192294377 ATGtgagaactctgcagcaactgcatcacagagcaatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701878 38 + 9440265 ATGtgagaactctgcagcaactgcatcacagagcaatg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8430981 38 + 21915920 ATGtgagaactctgcagcaactgcatcacagagcaatg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005804 38 - 90373283 ATGtgagaactctgcagcaactgcatcacagagcaatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185206 38 + 4234846 ATGtgagaattctgcagcaactgcatcacagagcaatg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189336 38 - 13750039 ATGtgagaactctgcagcaactgcatcacagagcaatg i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1088592 720 + 2694913 I e dasNov3.JH568778 3591541 789 - 6883506 I e micMur3.chr31 19189261 321 + 47401472 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=307877.000000 s hg38.chr21_KI270874v1_alt 68210 45 + 166743 tctccctctcccaattctgcttccttcaccagcctacagagctgt s panTro5.chr21 3692697 45 + 33445071 tctccctctcccaattctgcttccttcaccagcctacagagctgt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319599 45 + 46275980 tctccctctcccaattctgcttccttcaccagcctacagagctgt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258627 45 - 13858734 tctccctctcccaattctgcttccttcaccagcctacagagctgt i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396679 45 - 185818997 tctccctctcccaattctgcttccttcaccagcctacagagttgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221242 45 - 192294377 tctccctctcccaattctgcttccttcaccagcctatagagttgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701916 45 + 9440265 tctccctctcccaattctgcttccttcaccagcctacagagttgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431019 45 + 21915920 tctccctctcccaattctgcttccttcaccagcctacagagttgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005842 45 - 90373283 tctccttctcccaattctgcttccttcaccagcctacagagttgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185244 45 + 4234846 tctccctctcccaattctgcttccttcaccagcctacagagttgc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189374 45 - 13750039 tctccctctcccaattctgcttccttcaccagcctacagagttgt i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19189582 45 + 47401472 tctccctctcccaattctgcttccttcatatgcctacagaaatgt i micMur3.chr31 I 321 C 0 s proCoq1.NW_012144079v1 1089312 45 + 2694913 tctccctctcccaattctgcttccttcaggtgcctacagaattgt i proCoq1.NW_012144079v1 I 720 C 0 e dasNov3.JH568778 3591541 789 - 6883506 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13819902 453 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=845928.000000 s hg38.chr21_KI270874v1_alt 68255 133 + 166743 ttctgaaaacactccTGTAGACTATCAAGTCAGTGTGTGAGAAGTTCTGTTATAGCACATTTATGTATTTTCCCTTTTCTT----CCTTTCTTCTTTCTAATTAGACAAACCTACAAAGGATTCGAAGTAGCTATGG s panTro5.chr21 3692742 133 + 33445071 ttctgaaaacactccTGTAGACTATCAAGTCAGTGTGTGAGAAGTTCAGTTATAGCACATTTATGTATTTTCCCTTTTCTT----CCTTTCTTCTTTCTAATTAGACAAACCTTCAAAGGATTTGAGGTAGCTATGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319644 133 + 46275980 ttctgaaaacactccTGTAGACTATCAAGTCAGTGTGTGAGAAGTTCAGTTATAGCACATTTATGTATTTTCCCTTTTCTT----CCTTTCTTCTTTCTAATTAGACAAACCTTCAAAGGATTTGAGGTAGCTATGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258672 133 - 13858734 ttctgaaaacactcctcTAGACTATCAAGTCAGTGTGTGAGAAGTTCTGTTATAGCACATTTATGTATTTTCCCTTTTCTT----CCTTTCTTCTTTCTAATTAGACAAACCTACAAAGGATTCGAGGTACCTATGG i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396724 130 - 185818997 ttctgaaaacactccTGTAGACCACCAAGTCAGTGTGTG---AGTTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTACAAAGGATTTGAGGTAGCTATGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221287 130 - 192294377 ttctgaaaacactccTGTAGACCACCAAGTCAGTGTGTG---AGTTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTACAAAGGATTTGAGGTAGCTATGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8701961 130 + 9440265 ttctgaaaacactccTGTAGACCACCAAGTCAGTGTGTG---AGTTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTACAAAGGATTTGAGGTAGCTATGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431064 130 + 21915920 ttctgaaaacactccTGTAGACCACCAAGTCAGTGTGTG---AGTTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTACAAAGGATTTGAGGTAGCTATGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15005887 128 - 90373283 ttctgaaaacactcccGTAGACTATCAAGTCAGTGTGT-----GTTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTGCAAAGGATTTGAGGCAGCTATGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185289 130 + 4234846 ttctgaaaacactccTGTAGACCACCAAGTCAGTGTGTG---AGGTTTGTTATAGCATATTTATGTATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTACAAAGGATTTGAGGTAGCTATGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189419 130 - 13750039 ttctgaaaacactccTGTAGACCATCAAGTCAGTGTGTG---AGTTTTGTTATAGCATATTTATATATTTTTCATTTTCTT----CCTTTCTTCTTTCTAATTTGACAAACCTACAAAGGATTTGAGGTAGCTATAG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19189627 130 + 47401472 ttctgaaagcactccTGTAGACTATCAAGCAACTCTATGATGAG--CTGTATTAGCATATTAATGCATTTTTCCTTTAC-T----TCTTTCTTCTTTCTAATAGGACAAATCCACAAAGGATTTGAGGTAGCTATGG i micMur3.chr31 C 0 I 108 s proCoq1.NW_012144079v1 1089357 121 + 2694913 ttctgaaagcactccTGCAGACTATCAAGTAACTCTGTG-----------ATTAGCATAGTCATGCATTTTTCCCTTCC-T----CCTTTCTTCTTTCTAATTAGACAAATCCACAAAGGATTTGAGGTAGCTATGG i proCoq1.NW_012144079v1 C 0 C 0 s canFam3.chr31 13820355 134 + 39895921 TTTTTAAAGCACTCCTGTGGAAAATCAAGTCACTCTGAG---AGGTTTACTATAGCATATTTAAGAGTTTTTCCATTCCTTCCTACCTTCCTTTCTTCTAATTAGAGAAATCCACAAAGGATTTGAAGCAGCAGCAG i canFam3.chr31 I 453 C 0 e dasNov3.JH568778 3591541 789 - 6883506 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=678671.000000 s hg38.chr21_KI270874v1_alt 68388 125 + 166743 AACACCATATAGGAAATTAAATACCAGCAGTTAGAAAAATCTTTCTTCCTTACTTACAACAAAACAATGTTAATGTTAGCTAC----AGTTTTATTCTAAAGAAAAAAAAAGAATGCAAATTTTATTTA s panTro5.chr21 3692875 125 + 33445071 AACACCATATAGGAAATTAAATACCAGCAGTTAGAAATATCTTTCTTCCTTACTTACAACAAAACAATGTTAACGTTAGCTAC----AGTTTTATTCTAAAGAAAAAAAAAGAATGCAAATTTTATTTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319777 125 + 46275980 AACACCATATAGGAAATTAAATACCAGCAGTTAGAAATATCTTTCTTCCTTACTTACAACAAAACAATGTTAACGTTAGCTAC----AGTTTTATTCTAAAGAAAAAAAAAGAATGCAAATTTTATTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258805 121 - 13858734 AACACCATATAGGAAATTAAATACCAGCAGTTAGAAATATCTTTCTTC----CTTACAACAAAACAATGTTAATGTTAGCTAC----AGTTTTATTCTAAAGAAAGAAAAAGAATGCAAATTTTATTTA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396854 124 - 185818997 TACACCTTATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACAACAAAACAATGTTAATGTTAGCTAC----AGTTTTATTCTAAAGAAA-AAAAAGAATGCAAATTTTATTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221417 124 - 192294377 TACACCTTATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACAACAAAACAATGTTAATGTTAGCTAC----AGTTTTATTCTAAAGAAA-AAAAAGAATGCAAATTTTATTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702091 124 + 9440265 TACACCTTATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACAACAAAACAATGTTAATGTTAGCTAC----AGTTTTATTCTAAAGAAA-AAAAAGAATGCAAATTTTATTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431194 124 + 21915920 TGCACCTGATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACAACAAAACAATGTTAATGTTAGCTAC----AGTTTTATTCCAAAGAAA-AAAAAGAATGCAAATTTTATTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006015 124 - 90373283 TACACCTTATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACATCAAAACAATGTTAACATTAGCTAC----AGTTTTATTCTAAAGAAA-AAAAAGAATGCAAATTTTATTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185419 124 + 4234846 TACACCTTATAGGAAATTAAATACCACCAGTTAGATAAATCTTTCTTCCTTCCTTACAACAAAACAATGTTAATGTTAGCTAT----AGTTTTATTCCAAAGAAA-AAAAAGAATGCAAATTTTATTCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189549 124 - 13750039 TACACCTTATAGGAAATTAAATATCACCAGTTAGATAAATCTTTTTTCCTTCCTTACAACAAAACAATGTTAATGTTAGCTAC----AGTTTTATTCTAAAGAAA-AAAAAGAATGCAAATTTTATTCA i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1089478 122 + 2694913 TGTGCCATACAGGAAAATAAATATCATTAGTTAGCTGTATCTTTCTTCCTTCCTTACAACAAAACAATGTTAGTTTTAGTTACTTAAAGTTTTATTCTGAAGAAA-------AATATAAATTTTATTTA i proCoq1.NW_012144079v1 C 0 C 0 s canFam3.chr31 13820489 112 + 39895921 TATGCCATATAGGAAAAC-----TCAGTAGTCAGCCATAAATTTTTTCCTTCCTTAT-----GACAGTGTTCACTTTAATTAC-----TTATTATTCTGAAGAAA-AAAAAG-ACATAAATTGTATTTA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3591541 789 - 6883506 I e micMur3.chr31 19189757 108 + 47401472 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=339197.000000 s hg38.chr21_KI270874v1_alt 68513 44 + 166743 TTTTTGATCATTCAAAACATTTAAATCTATAACTGGTATGGTCT s panTro5.chr21 3693000 44 + 33445071 TTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319902 44 + 46275980 TTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258926 44 - 13858734 TTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155396978 44 - 185818997 TTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221541 44 - 192294377 TTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702215 44 + 9440265 TTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431318 44 + 21915920 TTTCTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006139 44 - 90373283 TTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185543 44 + 4234846 TTTTTGATCATTCAAAACATTTCAATCTATAACTGGTATGGTCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189673 44 - 13750039 TTTTTGATCATTCAAAACATGTCAATCTATAACTGGTATGGTCT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19189865 44 + 47401472 TTTTTGATCATTCAAAATATTTTTATCTATAACTGGCATGGTCT i micMur3.chr31 I 108 I 84 s proCoq1.NW_012144079v1 1089600 43 + 2694913 -TTTTGATCATTCAAAATATTTTTACCTATAACTGGCATGGTCT i proCoq1.NW_012144079v1 C 0 I 88 s canFam3.chr31 13820601 44 + 39895921 GTTTGGATCATTCAAAACATTTTAATCTATAATTGACATGGTCT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3591541 789 - 6883506 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=190743.000000 s hg38.chr21_KI270874v1_alt 68557 38 + 166743 CTGGAATCTAGACTTAGAA-TTTAAATTAGCTTAAAACA s panTro5.chr21 3693044 39 + 33445071 CTGAGATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319946 39 + 46275980 CTGAGATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3258970 39 - 13858734 CTGGGATCTAGACTTAGAATTTCAAATTAGCTTAAAACA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155397022 39 - 185818997 CTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221585 39 - 192294377 CTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702259 39 + 9440265 CTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431362 39 + 21915920 CTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006183 39 - 90373283 CTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185587 39 + 4234846 CTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189717 39 - 13750039 CTGGAATCTAGACTTAGAATTTTAAATTAGCTTAAAACA i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13820645 32 + 39895921 ATCACAGCTAGACTCATAATTTT------GCTTTAAAA- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1089643 88 + 2694913 I e dasNov3.JH568778 3591541 789 - 6883506 I e micMur3.chr31 19189909 84 + 47401472 I e otoGar3.GL873528 20744870 34 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=100792.000000 s hg38.chr21_KI270874v1_alt 68595 18 + 166743 TTATTTCTGCTAACTCTG s panTro5.chr21 3693083 18 + 33445071 TTATTTCTGCTAACTCTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17319985 18 + 46275980 TTATTTCTGCTAACTCTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3259009 18 - 13858734 TTATTTCTGCTAACTCTA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155397061 18 - 185818997 TTATTTCTGCTAGCTTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221624 18 - 192294377 TTATTTCTGCTAGCTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702298 18 + 9440265 TTATTTCTGCTAGCTTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431401 18 + 21915920 TTATTTCTGCTAGCTTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006222 18 - 90373283 TTATTTCTGCTAGCTTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185626 18 + 4234846 TTATTTCTGCTAGCTTTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189756 18 - 13750039 TTATTTCTGCTAGCTTTA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20744904 18 - 38779656 TTGTATGTGCTAACTCAA i otoGar3.GL873528 I 34 C 0 s canFam3.chr31 13820677 16 + 39895921 --GTTTCTGTTAGTTCAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1089643 88 + 2694913 I e dasNov3.JH568778 3591541 789 - 6883506 I e micMur3.chr31 19189909 84 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=478193.000000 s hg38.chr21_KI270874v1_alt 68613 60 + 166743 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTC s panTro5.chr21 3693101 60 + 33445071 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17320003 60 + 46275980 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3259027 60 - 13858734 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTC i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155397079 60 - 185818997 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221642 60 - 192294377 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702316 60 + 9440265 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431419 49 + 21915920 CAGTAGCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGT----------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006240 60 - 90373283 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTATACTGTAATTTCTCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185644 60 + 4234846 CAGTATCAACATAATTACTAAGGAAAATTTAAATTTTCTATTACACTGTAATTTCTCCTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189774 60 - 13750039 CAGTATCAACATAATTGCTAAGGAAAATTTAAATTTTCTATTACACTGTAATTCCTCCTC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19189993 60 + 47401472 CAGCATCAACATAATTCCTAAGGAAAATCTGAATTTTCTATTAAACTATAACTTCTTCTC i micMur3.chr31 I 84 C 0 s proCoq1.NW_012144079v1 1089731 60 + 2694913 CAGTATCAACAAAATTCCTAAGGAAAATTTGAATTTTCTATTAAACTATAACTTCTTCTC i proCoq1.NW_012144079v1 I 88 C 0 s otoGar3.GL873528 20744922 60 - 38779656 CAGTATTGACATAATTCCTAAGGAAAATTTGAATTTTATATTAAATTGCAACTTCTGCTC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13820693 59 + 39895921 TAGTATCAACCTAAACCCTAAGGAAAATCTGAA-TTTCTATTAGAATGTAACTTCTCTTC i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3591541 789 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=942025.000000 s hg38.chr21_KI270874v1_alt 68673 122 + 166743 CATTCTACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTTAAAAAGGA----------------------------------------------AAAACTGGATTATTTTAGCAAATCAATAAT---------TATTTACAAGtagat-------------------------------------------------- s panTro5.chr21 3693161 121 + 33445071 CATTCTACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCT-AAGTGAATTTTAAAAAGGA----------------------------------------------AAAACTGGATTATTTTAGCAAATCAATAAT---------TATTTACAAGtagat-------------------------------------------------- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17320063 121 + 46275980 CATTCTACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCT-AAGTGAATTTTAAAAAGGA----------------------------------------------AAAACTGGATTATTTTAGCAAATCAATAAT---------TATTTACAAGtagat-------------------------------------------------- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3259087 122 - 13858734 CATTCTACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTTAAAAAGGA----------------------------------------------AAAACTGGATTATTTTAGCAAATCAATAAT---------TATTTACAAGtagat-------------------------------------------------- i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155397139 122 - 185818997 CATTCTGCAGTGAGATAAACCACAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTTAAAAAGGA----------------------------------------------AAAATTGAATTATTTTAGCAAATCAATAAT---------TATTTACAAGTAGAT-------------------------------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221702 122 - 192294377 CATTCTGCAGTGAGATAAACCACAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTTAAAAAGGA----------------------------------------------AAAATTGAATTATTTTAGCAAATCAATAAT---------TATTTACAAGTAGAT-------------------------------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702376 122 + 9440265 CATTCTGCAGTGAGATAAACCACAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTTAAAAAGGA----------------------------------------------AAAATTGAATTATTTTAGCAAATCAATAAT---------TATTTACAAGtagat-------------------------------------------------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431468 121 + 21915920 -ATTCTGCAGTGAGATAAACCGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATGTTAAAAAGGA----------------------------------------------AAAATTGAATTATTTTAGCAAATCAATAAT---------TATTTACAAGtagat-------------------------------------------------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006300 122 - 90373283 CATTCCACAGTGAGATAAACTGCAGCCTCTTAAGCTTTCAAATACACTAAACTTTCTAAAGTGAATTTTAAAAAGGA----------------------------------------------AAAATTGAATTATTTTAGCAAATCAATAAT---------TATTTACAAGtagat-------------------------------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185704 122 + 4234846 CATTCTGCAGTGAGATAAACCGCAGCCTCTTAAGCTTTCAAATACAATAAACTTTCTAAAGTGAATTTTAAAAAGGA----------------------------------------------AAAATTGAATTATTTTAGCAAATCAATAAT---------TATTTACAAGtagat-------------------------------------------------- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189834 122 - 13750039 CATTCTACAATGAGATAAACCGCAGCCTCTCAAGCTTTCCAATACACTAAACTTTCTAAAGTGAATTTTAAAAAGGA----------------------------------------------AAAATTGAATTATTTTGGCAAACCAATAAT---------TATTTACAAGtagat-------------------------------------------------- i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19190053 122 + 47401472 CATTCTGTACTGAGATAAACTTTGGCCTCTTAAGATTTCATACTCACTAAGTGTTATATAGGAAATTTTAACAAGTA----------------------------------------------AAAATTGGATTATTTTGGCAAATCAACTAT---------TACTTACagatagat-------------------------------------------------- i micMur3.chr31 C 0 I 58 s proCoq1.NW_012144079v1 1089791 118 + 2694913 CATTCTGTATTGAAATAAACTTTGGCCTCTTAAGATTTCATATTCACTATGCATTCTATAGTAAATGTTAACAAGTA----------------------------------------------AAAATTGGATTATTTCAGCAAATCAACTA-------------TTACagatacat-------------------------------------------------- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20744982 121 - 38779656 CACTCTGTATTGAGATAAGCATTAGCTTTTTAA-ATTTCAAACTCACGAAGTGTCCTAAAGCAAATTTTAACAAGTA----------------------------------------------ATAATTGAATCATTCTATCAAATCAACTAT---------TATTTACAGATAGAT-------------------------------------------------- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13820752 122 + 39895921 TATTTTATATGGAGATATACTGAGGTCTCTTATGATTTCAAACTCACTAAACTTTCTGAAGTGAATTTTAAAGAGTA----------------------------------------------AAACTTGGATTGTTTCAACAAATCAACTAC---------TATTTAAAGATAGGT-------------------------------------------------- i canFam3.chr31 C 0 I 17 s dasNov3.JH568778 3592330 227 - 6883506 CATTTTATAGTGCAATAAACTGCACCCTCTTAAGATTTCAAACTCACTAAACTTTCTTAAGTGAGTTTTAAACAGTAAAAATTGGGCCATTTCAGAAAACTTTTGAAAATTAATTTTAAAGTTAAAATTGGATTATTTCAGCAAGTCAACTATTAAATATGATAACTAGAAATAGATGATAGAAATAGAAAGAGATAGAGACAGCTAGAGATATATTatgggtggat i dasNov3.JH568778 I 789 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=284777.000000 s hg38.chr21_KI270874v1_alt 68795 63 + 166743 --------tcatagatca--------------gat-----tagac-------tagattcgactga-tagatATAACACATTCATAAGAAACCAAAATT- s panTro5.chr21 3693282 58 + 33445071 --------tcatagatc------------------------agac-------tagattcgattga-tagataTAACACATTCATAAGAAAACAAAATT- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17320184 58 + 46275980 --------tcatagatc------------------------agac-------tagattcgattga-tagataTAACACATTCATAAGAAAACAAAATT- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3259209 63 - 13858734 --------tcatagatca--------------gat-----tagac-------tagattcgattga-tagatATAACACATTCATAAGAAAACAAAATT- i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155397261 64 - 185818997 --------TCATAGATCA--------------GAT---AATAGAC-------TAGATTCGATTGA-TATATATAACACATTCCTAAGAAAA-AAAATT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221824 64 - 192294377 --------TCATAGATCA--------------GAT---AATAGAC-------TAGATTCGATTGA-TATATATAACACATTCCTAAGAAAA-AAAATT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702498 61 + 9440265 --------tcatagatcc--------------gat-----tagac-------tagattcgattga-tATATATAACACATTCCTAAG-AAA-AAAATT- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431589 62 + 21915920 --------tcatagatca--------------gat-----tagac-------tagattcgattga-tagatATAACACATTCCTAAGAAAA-AAAATT- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006422 62 - 90373283 --------tcatagatca--------------gat-----tagac-------tagatttgattga-tagatACAACACATTCCTAAGAAAA-AAAATT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185826 62 + 4234846 --------tcatagatca--------------gat-----tagac-------tagattCAATTGA-CAGATATAACACATTCCTAAGAAAA-AAAATT- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 189956 62 - 13750039 --------tcatagatca--------------gat-----tagac-------tagattcaattga-tagatATAACACATTCCTAAGAAAA-AAAATT- i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1089909 62 + 2694913 --------tgatagttta--------------gag-----tagat-------taaattagatgga-tagatGTAACATATTCATGAGAAAA-AACATT- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20745103 54 - 38779656 -------------GAGTA--------------GCT-----GAGAT-------TAAATTAGATTGA-TAAGTGTAACATATT-ATGAGAAAA-AA-AT-- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13820891 65 + 39895921 --------TTATAGAAAA--------------GAT------GGACTGATGGATAGAT--AAATGA-CAGATATAACACATTCATGAAAAAT-AAATG-- i canFam3.chr31 I 17 C 0 s dasNov3.JH568778 3592557 94 - 6883506 ggatggatggatagatgaatggatggtgaatggatggaGAGAGAC----AGACAGATTAAACTGGTTGAATATAATACATTCATGAGGGAA-AAAAATG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19190175 58 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=532138.000000 s hg38.chr21_KI270874v1_alt 68858 79 + 166743 GTTGGATTCAAATAGTAAAAGTA----ACTAAGTAGATAAATTCAGACTTCCAGAT--------GAAATATGAATTCTTTATGAAATAATA s panTro5.chr21 3693340 79 + 33445071 GTTGGATTCAAATGGTAAAAGTA----ACTAAGTAGATAAATTCAGACTTCCAGAT--------GAAATATGAATTCTTTATGAAATAATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17320242 79 + 46275980 GTTGGATTCAAATGGTAAAAGTA----ACTAAGTAGATAAATTAAGATTTCCAGAT--------GAAATATGAATTCTTTATGAAATAATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3259272 79 - 13858734 GTTGGATTCAAATGGTAAAAGTA----ACTAAGTAGATAAATTCAGACTTCCAGAT--------GAAATATGAATTCTTTATGAAATAATA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155397325 75 - 185818997 ATTGGATTCAAATGGTAAAAGTA----ACTAAG----TAAATTGAGACTTCCAGAT--------GAAATATGAATTCTTTATGAAATAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221888 75 - 192294377 ATTGGATTCAAATGGTAAAAGTA----ACTAAG----TAAATTGAGACTTCCAGAT--------GAAATATGAATTCTTTATGAAATAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702559 75 + 9440265 ATTGGATTCAAATGGTAAAAGTA----ACTAAG----TAAATTGAGACTTCCAGAT--------GAAATATGAATTCTTTATGAAATAATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431651 75 + 21915920 GTTGGATTCAAATGGTAAAAGTA----ACTAAG----TAAACTGAGACTTCCAGAT--------GAAATATGAATTCTTTATGAAATAATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006484 75 - 90373283 GTTGGATTCAAATAGTAAAAGTA----ACTAAG----TAAAATGAGACTTCCAGAT--------GAAATACGAATTCTTTATGAAATAATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185888 75 + 4234846 GTTGGATTCAAATGGTAAAAGTA----ACTAAG----TAAATTGAGACTTCCAGAT--------GAAATATGAATTCTTTATGAAACAATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 190018 75 - 13750039 GTTGGTTTCAAGTGGTAAAAGTA----ACTAAG----TAAATTGACACTTCCAGAT--------GAAATATGAATTCCTTATGAAATAATA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19190233 79 + 47401472 GATAGCTTCACACAGTAAAAGGT----ACTAAGTAGACAAATTCAGACTCCCAGAT--------AAAAAATCAATCCTTTATAAAATAATA i micMur3.chr31 I 58 C 0 s proCoq1.NW_012144079v1 1089971 61 + 2694913 GGTAGATTCAGATAGTAAAAGCT----ACTAAGTAGACAAATTCAGACTCCCAG--------------------------ATAAAATAATA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20745157 87 - 38779656 GATAGATTCAGACAGTAAAACCT----CCCAAGTAGGCAAATTCAGACTCCTAGATTAAAAAAAAAAAAATCAACTCTTTATAAAATAATA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13820956 59 + 39895921 -GTTAATTTAGATGATAAAAACA-----------------------ACTCTTAGAT--------GAAAGGTGAACCCTTCATAAAATAATA i canFam3.chr31 C 0 I 378 s dasNov3.JH568778 3592651 81 - 6883506 --TAGATTCAGATATTAAAATCAAAGAACTAAGCAGGCAAATTGAGACTCCCAGAT--------GAAAAATGATTCCTTTACACAATAATG i dasNov3.JH568778 C 0 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=6207613.000000 s hg38.chr21_KI270874v1_alt 68937 777 + 166743 AGATATCGCTATTTGTGGCAATAAAATTTGGATGCTAATAGCGCAAAGGAAGTTTTATAAATGAAATAAGCATGGTCAAAATTAGTCTAACACCTCTGACCACAACTCTTG-TTTTTGTTGAAACACAATATAATTAAGC-CAA-TACTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTGATTAATGCCTGAACATATGGTGATACGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATTAAAACTGTCTGCATTGGAAA---AATATGTATTTTTG---GGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCGCTTAAACCTTATGCGATTCATTATTGGCAATTT------AAATTACCTCGATAATCAG-TTTTCAATTACTAAATTAAGATCATTATAACATAGTCCAAAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAATAAACTGTCAACTAGGCATGTCTGGAGATATGATCAATTACGTTAA-GTGATTTGACCAATATGGCTGCATGGGAAGAACATTTCTGACCCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACACTTAAGAAAAGTGACATTTTACTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGATAAATGTAAGTATATGTGTGCAGGAATACATCCTGAATATACCAAAACAGGGCACATATTTGCCTTTTTA---------TAACTTTTTT s panTro5.chr21 3693419 777 + 33445071 TGATATAGCTATCTGTGGCAATAAAATTTGGATGCTAATAGCACAAAGGAAGTTTTATAAATGAAATAAGCATGGTCAAAATTAGTCTAACACCTCCGACCACAACTCTTG-TTTTTGTTGAAACACAATATAATTAAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTGATTAATACCTGTACATATGGTGATACGACAGAAGAAAGAAATCTATTATTACTGTAGTTACAATTCAGGTTTATTATAAAAACCATCTGCATTGGAAA---AATATGTATTTTTG---GGTAATTGTTTCATGGATTATATCAATATAGGTAAGGTATTAG-GTTTTTAAAGATTTCGCTTAAACCTTATGCGATTCATTATTGGCAATTT------AAATTACCTCGATAATCAG-TTTTCAATTACTAAATTAAGATCATTACAACATAGTCCAAAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAATAAACTGTCAACTAGGCATGTCTGGAGATATGATCAATTACATTCA-GTGATTTGACCAATATGGCTGCATGGGAAGAACATTTCCGACCCTTTTTGGTCAGGCCAAATATTTTTTTGTCAATAGTTGTCAGTAGTTGATATAAACACTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGATAAATGTAAGTATATGTGTGTAGGAATACATCCTGAATATACCAAAACAGGGCACATATTTGCCTTTTTA---------TAACTTTTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17320321 777 + 46275980 TGATATAGCTATCTGTGGCAATAAAATTTGGATGCTAATAGCACAAAGGAAGTTTTATAAATGAAATAAGCATGGTCAAAATTAGTCTAACACCTCCGACCACAACTCTTG-TTTTTGTTGAAACACAATATAATTAAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTGATTAATACCTGTACATATGGTGATACGACAGAAGAAAGAAATCTATTATTACTGTAGTTACAATTCAGGTTTATTATAAAAACCATCTGCATTGGAAA---AATATGTATTTTGG---GGTAATTGTTTCATGGATTATATCAATATAGGTAAGGTATTAG-GTTTTTAAAGATTTCGCTTAAACCTTATGCGATTCATTATTGGCAATTT------AAATTACCTCGATAATCAG-TTTTCAATTACTAAATTAAGATCATTACAACATAGTCCAAAAAATGACAATTTAGCTT---TA-----ATAG-----GAAAGAAATAAACTGTCAACTAGGCATGTCTGGAGATATGATCAATTACGTTCA-GTGATTTGATCAATATGGCTGCATGGGAAGAACATTTCCGACCCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATATAAACACTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGATAAATGTAAGTATATGTGTGTAGGAATACATCCTGAATATACCAAAACAGGGCACATATTTGCCTTTTTA---------TAACTTTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3259351 778 - 13858734 CGATATAGCTATTTGTGGCAATAAAATTTGGATGCTAATAGCACAAAGGAAGTTTTATAAGTGAAATAAGCATGGTCAAAATTAGTCTAACACCTCCGACCACAACTCTTGTTTTTTGTTGAAACACAATATAATTAAGC-CAA-TAATGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTGATTAATGCTTGAACATATGGTGATACGACAGAAGAAACAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAAAAACCATCTGCATTGGAAA---AATATGTATTTTTG---GGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCGCTTAACCCTTATGCTATTCATTATTGGCAATTT------AAATTACCTCGATAATCAG-TTTTCAATTACTAAATTAAGATCATTACAACATAGTCCAAAAAATGACAGTTTAGTTT---TA-----ATAG-----GAAAGAAATAAACTGTCAACTAGGCATGTCTGGAGATATGATCAATTACGTTCA-GTGATTTGACCAATATGGTTGCATGGGAAGAACATTTCTGACCCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACACTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATAGAGATAAATGTAAGTATATGTGTGCAGGAATACATCCTGAATATACCAAAACAGGGCACATATTTGCCTTTTTA---------TAACTTTTTT i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155397400 777 - 185818997 TGATATAGCTATTTGTGGTAATAAAATTTGGATGCTAATAGCACAAAGGAAATTTTATAAATGAAATAAGCATGGTCAAAATTATTCTAACACCTCTGACCACAACTCTTG-TTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGTACATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAA---AATGTGTATTGTGG---AGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCAATTCATTATTGGCAATTT------AAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCCAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAGAAAACTGTCAGCTAGGCATATTTGGAGATCTGATCAATTACGTTCA-GTGATTAGACCACTATGGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGATAAATGGAAGTATATGTGTGTAGAAATACCACCTGAATATACCAAAACAGGGTGTATATTTGCTTTTTTA---------TAACTTTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162221963 777 - 192294377 TGATATAGCTATTTGTGGTAATAAAATTTGGATGCTAATAGCACAAAGGAAATTTTATAAATGAAATAAGCATGGTCAAAATTATTCTAACACCTCTGACCACAACTCTTG-TTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGTACATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAA---AATGTGTATTGTTG---AGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCAATTCATTATTGGCAATTT------AAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCCAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAAAAAACTGTCAGCTAGGCATATTTGGAGATCTGATCAATTACGTTCA-GTGATTAGACCACTATGGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGATAAATGGAAGTATATGTGTGTAGAAATACCACCTGAATATACCAAAACAGGGTATATATTTGCTTTTTTA---------TAACTTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8702634 777 + 9440265 TGATATAGCTATTTGTGGTAATAAAATTTGGATGCTAATAGCACAAAGGAAATTTTATAAATGAAATAAGCATGGTCAAAATTATTCTAACACCTCTGACCACAACTCTTG-TTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGTACATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAA---AATGTGTATTGTTG---AGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCAATTCATTATTGGCAATTT------AAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCCAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAAGAAACTGTCAGCTAGGCATATTTGGAGATCTGATCAATTACGTTCA-GTGATTAGACCACTATGGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGATAAATGGAAGTATATGTGTGTAGAAATACCACCTGAATATACCAAAACAGGGTATATATTTGCTTTTTTA---------TAACTTTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8431726 777 + 21915920 TGATATAGCTATTTGTGGTATTAAAATTTGGATGCTAATAGCACAAAGGAAATTTTATAAATGAAATAAACATGGTCAAAATTATTCTAACACCTCTGACCACAACTCTTG-TTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGTACATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAA---AATGTGTATTGTTG---AGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCAATTCATTATTGGCAATTT------AAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCCAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAAAAAACTGTCAACTAGGCATATCTGGAGATCTGATCAATTACGTTCA-GTGATTAGACCACTATGGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGCTAAATGGAAGTATATGTGTGTAGAAATACCTCCTGAATATACCAAAACAGGGCATATATTTGCTTTTTTA---------TAACTCTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15006559 777 - 90373283 TGATATAGCTATTTGTGGTAATAAAATTTGGATGCTAATAGCACAAAGGAAATTTTATAAATGAAATAAGCATGGTCAAAATTATTCTAACACCTCTGACCACAACTCTTG-TTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCTGGAAATTTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGCACATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTCTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAA---AATGTGTGTTGTTG---AGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTGTTTAAAGATTTTGCTTAAACCTTATGCAATTCATTATTGGCAATTT------AAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCAAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAAAAAACTGTCAACTAGGCATGTCTGGAGATCTGATCAATTACATTCA-GTGATTTGACCAATATGGCTGCATGGGAAGAAGATTTCTGACTCTTTTTGATCAGGCCAAGTATTTTTTTATCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGATAAATGTAAGTATATGTGTGTAGGAATACCTCCTGAATATACCAAAACAGGGCATATATTTGCTTTTTTA---------TAACTTTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2185963 777 + 4234846 TGATATAGCTATTTGTGGTAATAAAATTTGGATGCTAATAGCACAAAGGAAATTTTATAAATGAAATAAGCGTGGTCAAAATTATTCTAACACCTGTGACCACAACTCTTG-TTTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGATCTGGAAATGTTATAGCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGTACATATGGTGACATGACAGAAGAAAGAAATCTATTATCACTGTAGTTACAATTCAGGTTTATTATAACAACTGTCTGCATTGGAAA---AATGTGTATTGTTG---AGTAATTGTTTCATGGATTACATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTCACTTAAACCTTATGCAATTCATTATTGGCAATTT------AAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGCAGTCCCCAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAAAAAACTGTCAACTAGGCATATCTGGAGATCTGATCAATTACGTTCA-GTGATTAGACCACTGTGGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAATTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGAGATAAATGGAAGTATATGTGTGTAGAAATACCTCCTGAATATACCAAAACAGGGCATATATTTGCTTTTTTA---------TAACTTTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 190093 773 - 13750039 TGATATAGCTATTTGTGGTAATAAAATTTGAATGCTAATAGCACAAAGGAAATTTTATAAATAAAATAAGCATGGTCAAAATTATTCTAACACCTCTGACCACAACTC-----TTGTGTTGAAACACAATATAATTGAGC-CAA-TATTGACCCGGAAATTTTATATCTTGCCATTCATCTTCTCCAAAATAAATTTATTAATGCCTGCACATATCGTGACATGACAGAAGAAAGAAATCTATTAACACTGTAGTTACAATTTAGGTTTATTATAACAACTGTCTGCATTGGAAA---AATGTGTATTGTTG---AGTAATTGTTTCATGGATTATATCAATGTAGGTAAGGTATTAG-GTTTTTAAAGATTTTGCTTAAACCTTATGCAATTCATTATTGGCAATTT------AAATTACCTCGATAGTCAG-TTTTCAATCACTAAATTAAGATCATTACAGTGTAGTCCCAAAAATGACAATTTAGTTT---TA-----ATAG-----GAAAGAAAAAAACTGTCAACTAGGCATGTCTGGAGATCTGATCAATTACATTCA-GTGATTGGACCAATATAGCTGCATGGGAAGAACATTTCTGACTCTTTTTGGTCAGGCCAAGTATTTTTTTGTCAATAGTTGTCAGTAGTTGATCTAAACCCTTAAGAAAAGTGACATTTTGCTCTGAAGAT-AATCAGCAAAATACAGAACAAATTATGGGGATAAATGTAAGTATATGTGTGTAGGAAAACCTCCTGAATATACCAAAACAGGGCATATATTTGCTTTTTTA---------TAACTTTTTT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19190312 773 + 47401472 TAATAAAGCCATTTGTGATAATAAAATTTGGATGTTAATAGCACAAAAGAAGGTTTATAAATGAAATAAGCAGAGTTAAAATTATTCTGACACCTTTGACCACAACTCTTG-TTATTG-TAAAAAACAACATGATTGAACACGA-TGTTGAACTAGAAATTTCATAGCTTGCCATTCATCT--TCCAAAATAAATTGATTAATTGCCATTTACATGGTGATGGGACAGAAGAAATAAATCTATTATCAGGACAGTTATAATTCATGTTTCTTATAAAGGCTGTTTATATAGGCAAAACAATGTGTACTGTTA---AATAATTGTCTGATGGATTGTATCAACATAGGAAAAGTATTGA-GTTTTTTAAGATTTCACTTAAACCTTATACAATTCATTAAAGGTAATTTAAC-TAAAATTACCTCTATAATTAATTTTTCAATTATTAAATTAAAGCCAATACAACATAGTGCC-AAAATAACAATTTAGTTCAACTA-----ATAG-----GATAGAAA-A-----------AGGTGTGTTTGGAGATACAATTAATCATTTTCA-GTGATTTGACCAATATGGGTGTATAGCTAGAACATTTCTGACTCTTTTTGATCAATCCAAGTATTTTT-TGTTAATAGTTGTGAATAGTTGACCCAAGCACATAGGGAAAGTGTTATTTTGTACTGAAGAT-AATCAGCAAAATATATAGCAAATTACGGAGACAAATGTAGATCTATGTATATGGGAATACATCCTGAATATACCAAAATAGGGCCTATATTTACCTTTTTA---------TAACTTCTTT i micMur3.chr31 C 0 I 1020 s proCoq1.NW_012144079v1 1090032 785 + 2694913 TGATACAGCCATTTGTGGCAATAAAATTTGGATGCTAATAGCACAAAGGAAAGTTTATAAATGAAATAAGCAGAGTTAAAATTATTCTGACACCTTTGACCACAACTGTTG-TTATTG-TAAAAAACAACATAATTGAACACGA-TGTCGAACTAGAAATTTCATAGCTTGCCATTCGTCT--TCCAAAATAAATTGATTAATGACCATTTACATGGTGATGTGACAGAAAAAAGAAATCTATTGTCAGTGCAGTTATAATTCATGTTTATTATAAAGGCTGTCTATATAGGCAAAACAATGTGTACTCTTG---AGTAATTGTCTGATGGATTATATCAACATAGAGAAAGTATTGA-GTTCTTTAAGATTTCACTTAAACCTTATGCAATTCATTAATGGTAATTTAAC-TAAAGTTACCTCTATAATTAGTTTTTCAATTATTAAATTAAAACCAATACAACATAGTGTC-AAAATAACAATTTAGTTCAAGTA-----GTAG-----GATAGAAA-AAGCTGTCACCTAGGTGTGTTTGGAGATATGATCAATCATTTTCATTTGATTTGGCCAATGTGGCTGCATAGCTAGAACATTTCTGACTCTTTTTGATCAATCCAAGTATTTTT-TGTTAATAATTGTCTACAGTTCACCCAAGCACATAGGGAAAGTGATATTTTGCCCTGAAGAT-AATCAGTAAAATATGTGGCAAATTATAGAGACAAATGTAAATCTGTGTATGTGGGAATACATCCTGAATATACCAAAATAGGGCACATATTTGCCTTTTTA---------TAACTTCTTT i proCoq1.NW_012144079v1 C 0 I 808 s otoGar3.GL873528 20745244 739 - 38779656 TGATACAGTCATTTATGGTAATAAAATTTGGATGCTAATAGCACAAAGGAAAGTTTATAAATGAAATAAGCAGAGTTAAAATTATTCTGACACCTTTGACCACAACTCTTG-TTATCG-TAAAAAGCGACGTAATTGAACAAAA-TGTTGAACTAGAAATTTCATAGCTGGCCATTCATCT--TCCAAAATAAATTGGTTAATGGCCATTTATATGTTGACGTAAGAGAGGAAAGAAATCTATTATCAGTGCAGTTATAATTCATGTTTATGTTAAAAGCTGTTCATATATGCAAAATAATGTGTACTATGGAGTAGTAATTGTCTGATGGATCGTATCAATGTAGGTAAGGCC------TTTTTT---ATTTCACTTAAACATTATGCAATGT-TTAATGataatt-----taaaattatcttaacaattactttttcaaatattaaattaaaaCCAAAACAACATAGTACC-AAAATAACAATTTAGTTCAACTA-----TTAG-----GAAAAAAACAAATTGTTAATTAGGTGTGTTTGGAGATGTGATCAATCATTTTCA-GTGATTCAGCCAATATGGTTTCAT-GCTAGAACATTTCTGACTGGTTTTGATCAACACAAGTATTTTT----------TTGTCAATAGTTGACCCAGATACACAGGTAAGGCAATATTTTGACCTAAAGAT-AATCAACGAATTACATAACAAATTA--------------------------TGAGAATACATCCTGGATATACCAAAATAGGGCATATATTTGTCTTTTTG---------TAACTTTTCT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13821393 761 + 39895921 aAATATTGCTATTTGTGGTTTAAAAAATTTGATACTAATAGCACAAAAGAAAGTTCATAAATGAAATAAGCACAATTAAAGTTATTCTAACACCTCTGACCATAACTCTTG-TTATTG-TAAAAAGCAATGTAATTGAACACAACTCTTGAACTAGAAATGTTATAGCTTGCCATTCATCT--TCCAAAACAAATTATTTAATGGCAGTTTATATGGAGATACGACAGATAAAAGAAATCTATTATCACTGCAGTTATAATTTACATTTATTATAAAGACAAT----ATAGACAAAATAATGGGTATGGTTC---AGTAGTTG----ATTGACTATACTAATGCAGGTAAAATATTAGTTTTTTTTAAGATTTCACTTAAACCTCATGTCATTCACTAAAGGCAATTTTAC-CTAAATTATTTCATTAATCAGTTTTTCAATGATTAAATTAAGGTCAATACAACAAAGTGCC-AAAATAACAATTAAGTTC---TA-----CTAGTATTAAAGAAAAAAAAAGTGTCAACTAGGTGTGTTTGGAGAAATGATCAATCATTTTCA-GTGATTTTGTT-------------------AACATTCCTGACCCTTTTTGATTGATCCAAGTATTGTTTTGTCAATAGCTACCAATAGTTGCCTCAAACAC--AGGGAGAGTGCTACTTTGATCTGAAAAT-CATCAGCAAAATATGTGACTAATTATGGAGACAAATATAAGTCTATGTGAGTAGGAATACATCCTGATAATACCAGAATAGTGCACAGATATGCCTTTTTA---------TAACCTTTTT i canFam3.chr31 I 378 I 4 s dasNov3.JH568778 3592732 763 - 6883506 TGATACAATCATTTGC----ATAAAATTTGGATGCTAGTAGCACAAAGGAAGGTTTAAAAGTGAAATAAGCATAGTTAAAATTAGTCTGACATCTACAACCACAACTCTTG-TTATTGT---AAAACAATGTAATTGAAC-ACA-TTTTTAACTAGAAATTTCATAGCTTGCCATTCATAT--TCCAAAA-GAATTGGTTAATGACTGTTTATTCGGGGGTATCACAGAAGAATGAAATCTATTATCACTGTAATTATAATTCACATTTATTATAAAGACTATGTGTATAGACAA---AATAA-------TG---AGTAATTATCTGATGTAATAGATCAATGTATATTGAGTATTCA-GTGTT------------TTTAACCTCTTGCACTTCATAAATGTCATTTTTTTACTAAATTATCTTGATCGTATATTTCTCTATTATTAAATTAAGAATGAAATCATATAATGTC-AAAGTAGCAATTCAATTC---AACTGGTATAG-----AAGGAAAAAAAACTGTCCACTACATATGTTT--AGATATAATCAAACATTTTCA-GTGACTTGGCCAATCTGGTTGGGTGGCAAGAACATTTCCAACCC-TTTTGATCAGTCCAAATATTTTC-TGTCAGTGGTTGTCAATAGTTGACCCAAACA--TAGTAGAAATAGTACTTTGCTCTGAAGATGAAACAGCAAAATATGTAACAAATTATGGGAGGAAATATAAGTCTATGTATATAGGAATATAATCTGGTTATATCAAAATGGTGCACATATTTGCCTTTTTAAGGCACCAGTAACTttttt i dasNov3.JH568778 C 0 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=8281.000000 s hg38.chr21_KI270874v1_alt 69714 1 + 166743 T s panTro5.chr21 3694196 1 + 33445071 T i panTro5.chr21 C 0 C 0 s panPan2.chr21 17321098 1 + 46275980 T i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3260129 1 - 13858734 T i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155398177 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162222740 1 - 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8703411 1 + 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8432503 1 + 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15007336 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2186740 1 + 4234846 T i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 190866 1 - 13750039 T i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20745983 1 - 38779656 T i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13822158 1 + 39895921 T i canFam3.chr31 I 4 C 0 s dasNov3.JH568778 3593495 1 - 6883506 t i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=18390.000000 s hg38.chr21_KI270874v1_alt 69715 3 + 166743 AAA s panTro5.chr21 3694197 3 + 33445071 AAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17321099 3 + 46275980 AAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3260130 3 - 13858734 AAA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155398178 3 - 185818997 AAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162222741 3 - 192294377 AAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8703412 3 + 9440265 AAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8432504 3 + 21915920 AAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15007337 3 - 90373283 AAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2186741 3 + 4234846 AAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 190867 3 - 13750039 AAA i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13822159 1 + 39895921 --A i canFam3.chr31 C 0 I 2 s dasNov3.JH568778 3593496 3 - 6883506 aaa i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=400.000000 s hg38.chr21_KI270874v1_alt 69718 2 + 166743 -AA s panTro5.chr21 3694200 2 + 33445071 -AA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17321102 2 + 46275980 -AA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3260133 2 - 13858734 -AA i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155398181 2 - 185818997 -AC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162222744 2 - 192294377 -AC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8703415 2 + 9440265 -AC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8432507 2 + 21915920 -AC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15007340 2 - 90373283 -AC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2186744 2 + 4234846 -AC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 190870 2 - 13750039 -AC i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3593499 2 - 6883506 ga- i dasNov3.JH568778 C 0 I 685 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=7104108.000000 s hg38.chr21_KI270874v1_alt 69720 1505 + 166743 AAGGAAAGTTGGGGATTaagatggcagataggaggcaggactagcttgcagcttccgcttggacagac--agagcagcatgtggagattcacatcatgaactt---ctccaaaaactacggcaggagcataaccaggaaagccaagagaatccacagaccctttgaaggaactgaatcaccaatgcaggctccctgagatgctgaaaaactgtgagtccacttgctttctcaatggggaggctcgtggtctggggcaagttcttagtcctggtctccggctgcctgaaaatcgattcggtgctgtttggggaacacagtgaaagtgagaccagtctttaggactgcaggctgtgtgagagcagggtgaggcctgtgactgccggctttt-ccccactttcctggcaacctgtataactcagcagaggcagccataatccctccaggaatataactccactggactgggaatcacactcccat-cccccacagcagccacagcaagcctcacccaaggagaggctgagttcagacacccctaaccctgcccccacctggtggtctttctctacctaccctggtagccaaagacaaaggtcataatctttcggaagctctatagccctgtccactgcctgagagacctgaatacttaaccaggggtccctagagcaactttgcgtcctccctatagg---------gaggcagttttgaaagtgccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaatacaaccaagggccctcacagaattcacttcactcccttgcta---cctccactggggaaggtgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccagtaccagcccggagcctgggagctctgctgggtggctagacacagaatatcaaaaacagtcactaaagttaggctctcaggaagccccatgtctaggggaagggggataacactacatcaagagagcaccctgtgatagaaaagaacctgagcagcagcccttgaattccagatattccctctgacatagtctacccaagtgacaaggaaccagaaaaacaattttagtaatatgacaaaacaagatttgttaacacctgcaaaagatcatatcagctcaccagcaatgaacccaaaccaagatgaaatctctgaattgccagaaaaagaattcagaaggtcaattattaagctaatcaaggaggcaccagaaaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagcaaatttcttcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacac----agagaaatacaaaatgcactggaaagtctcagcaatagaatcaaacaagcagaagaaagatcttcagagctcaaagaaaagtctttcaaattaacctaatccaacagagacaaagaaaaaagagtttt----t s panTro5.chr21 3694202 1508 + 33445071 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagcttgcagcttccgcttggacagac--agagcagcatgtggagattcacatcatgaactt---ctccaaaaactactgcaggagcataaccaggaaagccaagagaatccacagaccctttgaaggaactgaatcaccactgcagcctccctgagatgctgaaaaactgtgagtccacttgctttctcaatggggaggctcatggtctggggcaagttcttagtcctggtctccgactgcctgaaaatcgattcggtgccgtttggggaacacagtgaaagtgagaccagtctttaggactgcaggctgtgtgagagcagggtgaggcctgtgactgccggcttttcccccactttcctggcaacctgtataactcagcagaggcagccataatccctccaggaatataactccactggactgggaatcacacctccat-cccccacagcagccacagcaagcctcacccaaggagaggctgagttcagacatccctaaccctgcccccacctggtggtctttctctacctaccctggtagccaaagacaaaggtcgtaatcttttggaagctctatagccctgtccactgcctgagagacctgaatacttaaccaggggtccctagggcaagtttgcatcctccctatagg---------gaggcacttttgaaagtgccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacacaaccaagggccctcacagagttcacttcactcccctgcta---cctccactggggaaggtgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccagtaccagcccggagcctgggagctctgctgggtggctacacacagaatatcaaaaacagtcactaaagttaggctctcaggaagccccatgtctaggggaagggggataacactacatcaagaaagcaccttctgatagaaaagaacctgagcagcag-ccttgaattccagatattccctctgacatagtctacccaaatgacaaggaaccagaaaaacaattttagtaatatgacaaaataagatttgttaacacctgcaaaagatcatatcagctcaccagcaatgaacccaaaccaagatgaaatctctgaattgccagaaaaagaattcagaaggtcgcttattaagctaatcaaggaggcaccagaaaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaatttcttcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcgctggaaagtctcagcaatagaatcaaacaagcagaagaaagatcttcagagctcaaagaaaagtctttcaaattaacctaatccaacaaagacaaagaaaaaagag-ttt----t i panTro5.chr21 C 0 C 0 s panPan2.chr21 17321104 1510 + 46275980 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagcttgcagcttctgcttggacagac--agagcagcatgtggagattcacatcatgaactt---ctccaaagactactgcaggagcataaccaggaaagccaagagaatccacagaccctttgaaggaactgaatcaccactgcaggctccctgagatgctgaaaaactgtgagtccacttgctttctcaatggggaggctcatggtctggggcaagttcttagtcctggtctccgactgcctgaaaatcgattcggtgccgtttggggaacacagtgaaagtgacaccagtctttaggactgcaggctgtgtgagagcagggtgaggcctgtgactgccggcttttcccccactttcctggcaacctgtataactcaccagaggcagccataatccctccaggaatataactccactggactgggaatcacacctccatccccccacagcagccacagcaagcctcacccaaggagaggctgagttcagacatccctaaccctgcccccacctggtggtctttctctacctaccctggtagccaaagacaaaggtcgtaatcttttggaagctctatagccctgtccactgcctgagagacctgaatacttaaccaggggtccctagggcaagtttgcatcctccctatagg---------gaggcacttttgaaagtgccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacacaaccaagggccctcacagagttcacttcactcccctgcta---cctccactggggaaggtgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccagtaccagcccggagcctgggagctctgctgggtggctacacacagaatatcaaaaacagtcactaaagttaggctctcaggaagccccatgtctaggggaagggggataacactacatcaagaaagcaccttctgatagaaaagaacctgagcagcagcccttgaattccagatattccctctgacatagtctacccaaatgacaaggaaccagaaaaacaattttagtaatatgacaaaataagatttgttaacacctgcaaaagatcatatcagctcaccagcaatgaacccaaaccaagatgaaatctctgaattgccagaaaaagaattcagaaggtcgcttattaagctaatcaaggaggcaccagaaaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaatttcttcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcgctggaaagtctcagcaatagaatcaaacaagcagaagaaagatcttcagagctcaaagaaaagtctttcaaattaacctaatccaacaaagacaaagaaaaaagag-ttt----t i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3260135 1506 - 13858734 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagcttgcagcttccacttggacagac--agagcagcatgtggagattcacgtcatgaactt---ctccaaaaactactgcagaagcataaccaggaaagccaagagaatccacagaccctttgaaggaactgaatcaccactgcaggctccctgagatgctgaaaaactgtgagtccacttgctttctcaatggggaggctcgtggtctggagcaagttcttagtcctggtctccggctgcctgaaaatcgattcggtgccgtttggggaacacagtgaaagtgagaccagtctttaggactgcaggctgtgtgagagcagggtgaggcctgtgacttccggctttt-ccccactttcctggcaacctgtataactcagcagaggcagccataatccctccaggaatataactccactggactgggaatcacactcccat-cccccacagcagccacagcaagcctcacccaaggagaggctgagttcagacatccctaaccctgcccccacctggtggtctttctctacctaccctggtagccaaagacaaaggtcataatctttcggaagctctgtagccctgtccactgcctgagagacctgaatacttaaccaggggtccctagggcaagtttgcgtcctccctatagg---------gaggcagttttgaaagtgccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacacaaccaagggccctcacagagttcacttcactccc-tgcta---cctccactggggaaggtgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccagtaccagcccagagcctgggagctctgctgggtggctagacacagaataccaaaaacagtcactaaagttaggctctcaggaagccccatgtctaggggaagggggataacactacatcaagagagcaccctgtgatagaaaagaacctgagcagcagcccttgaattccagatattccctctgacatagtcta-ccagatgacaaggaaccagaaaaacaattttagtaatatgacaaaacaaggtttgttaacacctgcaaaagatcgtatcagctcaccagcaatgaacccaaaccaagatgaaatctctgaattgccagaaaaagaattcagacggtcaattattaagctaatcaaggagtcaccagaaaaaggtgaaatccaacttaaacaaatcaaaaacatgatgcaggattagaaagaaaatttcttcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcactggaaagtctcagcaatagaatcaaacaagcagaagaaagatcttcagagctcaaagaaaagtctttcaaattaacctaatccaacaaagacaaagaaaaaagag-ttt----t i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155398183 1512 - 185818997 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccacttggacagacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaaagccgagagaatccacagaccctttgaaggaactgaatcaccactgctggctcccagagatgctgaaaaaccgtgagtccacttgctttcttaatggggaggctcatggtctggggcaagttctcagtcctggtctccagctgcctgaaaatcgattcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtgtgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataacttggcagaggcagccataatccctccaggaatataactctattggactgggaatcacacccccat-cccccacagcagctacagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgcccccacctggtggtctttctctacctaccctggtagccaaagacaaaggtcacaatctttcggaagctctatggccctgtccactgcctgagagacctgaagacttaacca-ggatgcctagggcaagtttgtgtcctctctataggaccatagctgacgcacttttgaaagcaccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacacaaccaaggacccacacggagttcacttcactcccctgcta---cctccactggggaagatgtggatatcatggctgcaagacctgaagacggatcacatcacaggactcttcacagacactccccaataccagcccggagcctggtacctctgctgggtggcaggacgcagaatatcaaaaacaatcactgaagttaggcactcaggaagccccatgtctaggggaaggtggataacactgcatcaagggagcaccctgtgatagaaaagaatctcagcagcagcccttgaattccagatattccctctgacatagtctacccaagtgacagggaacaagaaaagcaatttttgc---------aagcaagatttgttaacccctgcaaaagatcataccagctcaccagcaatgaatccaaaccaagatgaaatatctgaattgtcagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaaatcctcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacgcttagagaaatacaaaatgcattgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaag-gttttcaaattaacctaatccaacaaagacaaagaagaaagag-tgt-aaa- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162222746 1511 - 192294377 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccacttggacagacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaaagccgagagaatccacagaccctttgaaggaactgaatcaccactgctggctcccagagatgctgaaaaaccgtgagtccagttgctttcttaatggggaggctcatggtctggggcaagttctcagtcctggtctccagctgcctgaaaatcgattcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtgtgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataacttggcagaggcagccataatccctccaggaatataactctattggactgggaatcacacccccat-cccccacagcagccacagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgcccccacctggtggtctttctctacctaccctggtagccaaagacaaaggtcacaatctttcggaagctctatggccctgtccactgcctgagagacctgaagacttaacca-ggatgcctagggcaagtttgtgtcctctctataggaccatagctgacgcacttttgaaagcaccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacataaccaaggacccacacggagttcacttcactcccctgcta---cctccactggggaagatgtggatatcatggctgcaagacctgaagacggatcacatcacaggactcttcacagacactccccaataccagcccggagcctggtacctctgctgggtggcaggacgcagaatatcaaaaacaatcactgaagttaggcactcaggaagccccatgtctaggggaaggtggataacaccgcatcaagggagcaccctgtgatagaaaagaatctcagcagcagcccttgaattccagatattccctctgacatagtctacccaagtgacagggaacaagaaaagcaatttttgc---------aagcaagatttgttaacccctgcaaaagatcataccagctcaccagcaatgaatccaaaccaagatgaaatatctgaattgtcagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaaatcctcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacgcttagagaaatacaaaatgcattgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaag-gttttcaaattaacctaatccaacaaagacaaagaagaaagag-tgt--aa- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8703417 1513 + 9440265 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccacttggacagacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaaagccgagagaatccacggaccctttgaaggaactgaatcaccactgctggctcccagagatgctgaaaaaccatgagtccacttgctttcttaatggggaggctcatggtctggggcaagttctcagtcctggcctccagctgcctgaaaatcgattcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtgtgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataacttggcagaggcagccataatccctccaggaatataactctattggactgggaatcacacccccat-cccccacagcagccacagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgcccccacctggtggtctttctctacctaccctggtagccaaagacaaaggtcacaatctttcggaagctctatggccctgtccactgcctgagagacctgaagacttaacca-gaatgcctagggcaagtttgtgtcctctctataggaccatagctgacgcacttttgaaagcaccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacacaaccaaggacccacacggagttcacttcactcccctgcta---cctccactggggaagatgtggatatcatggctgcaagacctgaagacagatcacatcacaggactcttcacagacactccccaataccagcccggagcctggtacctctgctgggtggcaggacgcagaatatcaaaaacaatcactgaagttaggctctcaggaagccccatgtctaggggaaggtggataacaccgcatcaagggagcaccctgtgatagaaaagaatctcagcagcagcccttgaattccagatattccctctgacatagtctacccaagtgacagggaacaagaaaagcaatttttgc---------aagcaagatttgttaacccctgcaaaagatcataccagctcaccagcaatgaatccaaaccaagatgaaatatctgaattgtcagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaaatcctcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcattgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaag-gttttcaaattaacctaatccaacaaagacaaagaagaaagag-tgtaaaa- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8432509 1521 + 21915920 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccacttggacagacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaaagccgagagaatccacagaccctttgaaggaagtgaatcaccactgctggctcccagagatgctgaaaaaccgtgagtccacttgctttcttaatggggaggctcatggtctggggcaagttctcagtcctggtctccagctgcctgaaaatcgcttcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtgtgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataactcagcagaggcagccataatccctccaggaatataactctattggactgggaatcacatccccat-cccccacagcagtcgcagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgcccccacctggtggtctttctctacctaacctggtagccaaagacaaaggtcataatctttcggaagctctgtggccctgtccactgcctgagagacctgaagacttaacca-ggatgcctagggcaagtttgtgtcctctctataggaccacagctgacgcatttttgaaagcgccacctcctggctggaggccaaccaac---acaccagtgcactaaac-aaaaacacaaccaaggacccacacggagttcacttcactcccctgctacctcctccactggggaagatgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccagtaccagcccggagcttggtacctctgctgggtggctagacgcagaatatcaaaaacaattactgaagttaggctctcaggaagccccatgtctaggggaaggtggataacaccacatcaagggagcaccctatgatagaaaagaatctcagcagcagcccttgaattccagatattccctctgacgtagtctacccaagtgacaaggaaccagaaaagcaattttagtaacatgacaaaacaagatttgttaacccctgcaaaagatcataccagctcaccagcaatgaatccaaaccaagatgaaatatctgaattgccagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaattcctcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatgaagcacacacttagagaaatacaaaatgcactgggaagtctcagcaacagaatcaaacaagcagaagaaagaacttcagagctcaaagaaaacgttttcaaattaatctaatccaataaagacaaagaaaaacgag-tgt--aa- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15007342 1494 - 90373283 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccgcttg----gacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaaag-------aatccacagaccctttgaaggaactgaatcaccactgctggctcccagaaatgctgaaaaaccatgagtccacttgctttcttaatggggaggctcatggtctggggcaagttctcaatcctggtctccagctgcctgaaaatcaattcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtatgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataacttggcagaggcagccataatccctccaggaatataactccattggactgggaatcacacccccat-cccccacagcagccacagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgctcccacctggtggtctttctctacctaccctggtagccaaaaacaaaggtcataatctttcggaagctctgtggccctgtccactgcctgagagacctgaagacttaacca-ggatgcctagggcaagtttgtgtcctctctataggaccacagctgatgcacttttgaaagcaccacctcctggctggaggccaaccaac---ataccagtgcactaaacaaaaaacacaaccaaggacccacacggagttcacttca---------------ctccactggggaagatgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccaataccagcctggagcttggtacctctgctaggtggctagacgcagaatatcaaaaacaatcactgaagttaggctctcaggaagccccatgtctaggggaaggcagataacaccacatcaagggagcaccctgtgatagaaaagaatctcagcagtagcccttgaattccagatattccctctgacatagtctacccaagtgacaaggaaccagaaaagcaattttagtaacatgacaaaacaagatttgttaacccctgcaaaagatcataccagctcaccagcaatgaatccaaaccaagatgaaatatctgaattgccagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaattcctcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcactgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaaaggttttcaaattaacctaatccaacaaagacaaagaaaaaagag-tgt----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2186746 1523 + 4234846 AAGAAAAGTTGGGGATTaagatggcagataggaggcaggactagctt-caccttccacttggacagacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactactgccagagcataaccaggaaagccgagacaatccacagaccctttgaaggaactgaatcaccactgctggctcccagagatgctgaaaaaccgtgagtccacttgctttcttaatggggaggctcatggtctggggcaagttctcagtcctggtcttcagctgcctgaaaatcgattcggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtgtgagagcagggtgaggcctgtgactgctggctttt-ccccactttcctggcaacctgtataactcagcagaggcagccataatccctccaggaatataactctattggactgggaatcacacccccat-cccccacagcagccacagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgcccccacctggtggtctttctctacctaccctggtagccaaagacaaaggtcataatctttcggaaactctatggccctgtccactgcctgagagacctgaagacttaacca-ggatgcctagggcaagtttgtgtcctctctataggaccacagctgacgcatttttgaaagcaccacctcctggctggaggccaaccaac---acaccagtgcactaaac-aaaaacacaaccaaggacccacacggagttcacttcactcccctgctacctcctccactggggaagatgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccaataccagcccagagcttggtacctctgctgggtggctagacgcagaatatcaaaaacaatcactgaagttaggctctcaggaagccccatgtctacgggaaggtggataacaccacatcaagggagcaccctgtgatagaaaagaatctcagcagcagcccttgaaatccagatattccctctgacatagtctacccaagtgacaaggaaccagaaaagcaattttagtaacatgacaaaacaagatttgttaacccctgcaaaagatcataccagctcaccagcaatgaatccaaaccaagatgaaatatctgaattgccagaaaaagaattcagaaggtcgattattaagctaatcaaggagccaccagagaaaggtgaaattcaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaattcctcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcactgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaaatgttttcaaattaacctaatccaacaaagacaaagaaaaacgag-tgtaaaa- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 190872 1512 - 13750039 AAGAAAAGTTGGAGATTaagatggcagataggaggcaggactagctt-caccttccacttggacagacagagagcagcatgtggagattcacatcatgaacttctgctccaaaaactattgccagagcatacccaggaaagccgagagaatccacagaccctttgaaggaagtgaatcaccaatgctggctcccagagatgctgaaaaaccgtgagtccacttgttttcttaatggggaggctcatggtctggggcaagttctcagtcctggtctccagctgcctgaaaatcgatttggtgctgtttggggaacacagtggaagcgagaccagtctttaggactgcaggttgtgtgagagcagggtgaggcctgtgactgctggctttt-ccgcactttcctggcaacctgtataactcagcagaggcagccataatccctccaggaatataactccattggactgggaatcacacccccat-cccccacagcagccgcagcaagcctcacccaaagagaggctgagttcagacatccctaaccctgc-cccacctggtggtctttctctacctaccctggtagccaaagaaaaaggtcataatctttcggaagctctatggccctgtccactgtctgaaagacctgaagacttaacca-ggatgcctagggcaagtttgtgtcctctctataggaccacagctgacgtagttttgaaagcaccacctcctggctggaggccaaccaacacaacaccagtgcactaaac-aaaaacacaaccaaggacccacacggagttcacttcactcccctgcta---cctccactggggaagatgtggatatcatggctgcaagacctgaagatggatcacatcacaggactcttcacagacactccccaataccagcctggagcctggtacctctgctgggtggctagacgcagaatatcaaaaacaatcactaaagttaggctctcaggaagccccatgtctaggggaaggcggataacactacatcaaggaagcatcctgtgatagaaaa-aatctcagcagcagcccttgaattccagatattccctctgacatagtctacccaagtgacaaggaaccagaaaagcaattttagtaacatgacaaaacaag----gttaacacctgcaaaagatcataccagctcacaagcaatgaatccaaaccaagatgaaatatctgaattgccagaaaaagaattcaaaaggtcgattattaagctaatcaaggagcca-cagagaaaggtgaaatccaacttaaagaaatcaaaaacatgatgcaggattagaaagaaaaattcctcagtgaaatagatagcataaataaaaaacaattacaacttctggaaatcaaggacacacttagagaaatacaaaatgcactgggaagtctcagcaatagaatcaaacaagcagaagaaagaacttcagagctcaaagaaaaggttttcaaattaacctaatccaacaaagacaaagaaaaaagag-tat----- i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e nomLeu3.chr25 4442849 1563 + 32716333 I a score=4704670.000000 s hg38.chr21_KI270874v1_alt 71225 835 + 166743 aaaaaaaatgaagaagaactccaagaagttcggaactatgtgaaacatccaaccctaagaataattggtgttcctagggaagaagagaatctaaaagtttgcaaaacatatttgagggaataatctaggaaatattccctgcccttgctagtgatctagacatccaataaaagtagctcaaagaacaccttggaaatttatcac--aaaaagattgacacctaggcacatagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaggcaaaaggatccagtaacctataaaggaaaacctaccagacaaacagcagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggattggggtcctatttttaggcaccttaaacaaaataattatcagccaagaaatttgtatccagagaaactaagctgcataaatgaaggaaaaatggtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatcctcaaaatacaccaaaatagaacttccttaaagcataaatctcagaggacctatataaaaacaatacaatgaaaaatggacttaaactacacccttcaacaagtggatttaacagatatttacagaacattctactcaacagctgcagaatatacgttctactcatcagcacatgaaacactttccaagatagaccatgtgataggccacaaaacaagtctcagtaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaatat s panTro5.chr21 3695710 835 + 33445071 aaaaaaaatgaacaagaactccaagaagttcggaactatgtgaaacatccaaccctaagaataattggtgttcctagggaagaagagaatctaaaagtttgcaaaacatatttgagggaataatctaggaaatattccctgcccttgctagtgatctagacatccagtaaaagtagctcaaagaacaccttggaaatttatcac--aaaaagattgacacctaggcacatagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaggcaaaaggatccagtaacctataaaggaaaacctaccagacaaacagcagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggattgggatcctatttttaggcaccttaaacaaaataattatcagccaagaaatttgtatccagagaaactaagcttcataaatgaagtaaaaatggtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatcctcaaaatacaccaaaatagaacttccttaaagcataaatctcagaggacctatataaaaacaatacaatgaaaaatggacttaaaccacacccttcaacaagtagatttaacagatatttacagaacattctactcaacagctgcagaatacacattctactcatcagcacatgaaacactttccaagatagaccatgtgataggccacaaaacaagtctcagtaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaatat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17322614 835 + 46275980 aaaaaaaatgaacaagaactccaagaagttcggaactatgtgaaacatccaaccctaagaataattggtgttcctagggaagaagagaatctaaaagtttgcaaaacatatttgagggaataatctaggaaatattccctgcccttgctagtgatctagacatccagtaaaagtagctcaaagaacaccttggaaatttatcac--aaaaagattgacacctaggcacatagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaggcaaaaggatccagtaacctataaaggaaaacctaccagacaaacagcagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggattggggtcctatttttaggcaccttaaacaaaataattatcagccaagaaatttgtatccagagaaactaagcttcataaatgaagtaaaaatggtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatcctcaaaatacaccaaaatagaacttccttaaagcataaatctcagaggacctatataaaaacaatacaatgaaaaatggacttaaaccacacccttcaacaagtggatttaacagatatttacagaacattctactcaacagctgcagaatacacattctactcatcagcacatgaaacactttccaagatagaccatgtgataggccacaaaacaagtctcagtaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaatat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3261641 835 - 13858734 aaaaaaaatgaacaagaactccaagaagttcggaactatgtgaaacatccaaccctaagaataattggtgttcctagggaagaagagaatctaaaagtttgcaaaacatatttgagggaataatctaggaaatattccctgcccttgctggtgatctagacatccaataaaagtagctcaaagaacaccttggaaatttatcac--aaaaagattgacacctaggcacatagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaggcaaaaggatccagtaacctataaaggaaaacttaccagacaaacagcagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggattggggtcctatttttacgcaccttaaacaaaataattatcagccaagaaatttgtatccagagaaactaagcttcataaatgaaggaaaaatggtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatcctcaaaatacaccaaaatagaacttccttaaagcataaatctcagagaacctatataaaaacaatacaatgaaaaatggacttaaactacacccttcaacaagtggatttaacagatatttacagaacattctactcaacagctgcagaatatacattctactcatcagcacatgaaacactttccaagacagaccatgtgataggccgcaaaacaagtctcagtaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtagaataa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4444412 833 + 32716333 aaaaaaaaaaaaaaaagactccaagaagttcggaactatgtgaaacatccaaccctaagaataattggtgttcctagggaagaagagaatctaaaagtttgcaaaacatatttgagggaataacctaggaaatattccctgcccttgctagtgatctagacatccaataaaagtagctcaaaaaacaccttgg-aatttatcac--aaaaagatgaacacctaggtgcacagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaggcaaaaggatccagtaacctataaaggaaaacctatcagacaaacagcagatttctctgcagaaaccctataaact------------------------------------------------------agaaa-------ggattggggtcctatttttaggcaccttaaac-aaataatcatcagccaagaaatttgtatccagagaaactaagctttataaatgaaggaaaaatagtcttttccagacaaacaagtgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatcctcaaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacaacgaaaaatggacttaaactacacccttcaacaagtggatttaacagatatttacagaacattctactcaacagctacagaatatatattctactcgtcagcacatgaaacattttccaagatagaccatgtgataggccacaaaacaagtctcagtaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataa i nomLeu3.chr25 I 1563 C 0 s rheMac8.chr3 155399695 833 - 185818997 aaaaaaaatgaacaaagactccaagaagtttagaactatgtaaaacatccaaccctaagaataattggtgttcctaaggaagaagataatctaaaaatttgcaaaacatatttgagggaa-aatataggaaatattccctggccgtgctagtgatctatccatccaataaaagtagctcaaagaatacctgggaaatttatcac-aaaaaagatttacacctaagcacacagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agcgaagcaaaagaatccagtgacctatgaaggaaaacctatcagacaaacaccagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggattagggtcctatttttaggcaccttaagcaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggaaaaatagtcttttccagacaaacaaacgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaa-gagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacaccgaaaaatggacttaaactacacccctcaacaagtgga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctccaagatagaccatgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162224257 834 - 192294377 aaaaaaaatgaacaaagactccaagaagtttagaactatgtaaaacatccaaccctaagaataattggtgttcctaaggaagaagataatctaaaaatttgcaaaacatatttgagggaataatataggaaatattccctggccgtgctagtgatctatccatccaataaaagtagctcaaagaatacctgggaaatttatcac-aaaaaagatttacacctaagcacacagtcgtcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaagcaaaagaatccagtgacctatgaaggaaaacctatcagacaaacaccagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggattagggtcctatttttaggcaccttaagcaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggaaaaatagtcttttccagacaaacaaacgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaa-gagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacaccgaaaaatggacttaaactacacccctcaacaagtgga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctctaagatagaccatgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8704930 834 + 9440265 aaaaaaaatgaacaaagactccaagaagtttagaactatgtaaaacatccaaccctaagaataattggtgttcctaaggaagaagataatctaaaaatttgcaaaacatatttgagggaataatataggaaatattccctggccgtgctagtgatctatccatccaataaaagtagctcaaagaatacgtgggaaatttatcac-aaaaaagatttacacctaagcacacagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaagcaaaagaatccagtgacctatgaaggaaaacctatcagacaaacaccagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggattagggtcctatttttaggcaccttaagcaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggaaaaatagtcttttccagacaaacaaacgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaa-gagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacactgaaaaatggacttaaactacacccctcaacaagtgga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctccaagatagaccatgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8434030 836 + 21915920 aaaaaaaatgaacaaagactccaagaagtttagaactatgtaaaacatccaaccctaagaataattggtgttcctaaggaagaagataatctaaaaatttgcaaaacatatttgagggaataatataggaaatattccctggccgtgctagtgatctagacatccaataaaagtagctcaaagaatacctgggaaatttatcacaaaaaaagatttacacctaagcacacagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaagcaaaaggatccagtaacctatgaaggaaaacctatcagacaaacaccagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggattagggtcctatttttaggaaccttaagcaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggagaaatagtcttttccagacaaacaaacgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagttcaaaatcttgaaacaaatccttgaaatacaccaaaatagaatctccttaaaacataaatctcagaggacctatataaaaacaatacactgaaaaatggacttaaactacacccctgaacaattgga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctccaagatggaccatgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattgtatcaagtattctctcagaccacagtggaataa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15008836 896 - 90373283 aaaaaaaatgaacaaagattccaagaactttagaactatgtaaaacatccaaccctaagaataattggttttcctaaggaagaagataatctaaaaatttgcaaaacatatttgagggactaatataggaaatattccctggccgtgctagtgatctagacattcaataaaagtatctcaaagaatacctgggaaatttatcac-aaaaaagatttacacctaagcacacagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaagcaaaaggatccagtaacctatgaaagaaaacctatcagacaaacaccagatttctcagcagaaaccctgtaaactagaaaggattagggtcctatttttaggcaccttaagcaaaataactatcagccaagaaatttgcagggattagggtcctatttttaggcaccttaagcaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggagaaatagtcttttccagacaaacaaacgctcagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacactgaaaaatggacttaaactacacccctgaacaattgga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctccaagatggaccatgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2188269 834 + 4234846 aaaaaaaatgaacaaagactccaagaagtttagaactatgtaaaacatccaaccctaagaataattggtgttcctaaggaagaagataatctaaaaatttgcaaaacatatttgagggaataatataggaaatattccctggccgtgctagtgatctagacatccaataaaagtagctcaaagaatacctgggaaatttatcac-aaaaaagatttacacctaagcacacagtcatcaggttatctaaagtcaaaataaaggaaacaatcttaaaagc----agtgaagcaaaaggatccagtaacctatgaaggaaaacctatcagacaaacaccagatttctcagcagaaaccctataaac-------------------------------------------------------agaaa-------ggattagggtcctatttttaggaaccttaagcaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggagaaatagtcttttccggacaaacaaacgcttagagaattcaccactaccaagctagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatctcagaggacctatataaaaacaatacactgaaaaatggacttaaactacacccctgaacaattgga-ttaacagatatttacagaacattctactcaacagctacagaatatacattatattcatcagcacatgaaacattctccaagatggaccatgtgataggccacaaaacaagtctcagcaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 192384 838 - 13750039 taaaaaaatgaacaaagactccaagaagtttagaactatgtaaaacatccaaccctaagaataattggtgttgccaaggaagaagataatctaaaaatttgcaaaacatatttgagggaataatataggaaatattccctggccttgctagtgatctagacattcaataaaagtagctcaaagaatacctgggaaatttatcac-aaaaaagatttacacctaggcacacagtcatcaggttgtctaaagtcaaaataaaggaaacaatcttaaaagcagtaagtgaggcaaaaggatccagtaacctatgaaggaaaacctatcagacaaacaccagatttctcagcagaaaccctataaact------------------------------------------------------agaaa-------ggactggggtcctatttttaggcaccttaaacaaaataactatcagccaagaaatttgcatccagagaaagtaaacttcataaatgaaggaaaaatagtcttttccagacaaacaaacacttagagaattcaccactaccaagccagcactacaaaaactgctaaaaggagctcaaaatcttgaaacaaatccttgaaatacaccaaaatagaacctccttaaagcataaatttcagaggacctatataaaaacaatacacc-aaaaatggacttaaactacacccctcaacaagtgga-ttaacagatatttacagaacattctacccaacagttacacaatatacattatattcatcagcacatgaaacattctccaagatagaccatgtcaaaggccacaaaacaagtctcaacaaatttaagaaaattgaaattatatcaagtattctctcagaccacagtggaataa i colAng1.NW_012120598v1 C 0 I 310 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=1740369.000000 s hg38.chr21_KI270874v1_alt 72060 315 + 166743 aattggaaaccaactccaaagggaaccttcaaaaccatacaaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctatcaaaacctctgggatacagcaaaaatggtgctaagagaaa-agttcatagcattaaatgcctacatcgaaacatctaaaagagcacacatagactatcaaaggtcaaacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag s panTro5.chr21 3696545 315 + 33445071 aattggaaaccaactccaaagggaaccttcaaaaccatacaaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattatttgaactgaataataatagtgacacaacctatcaaaaccccagggatacagcaaaagtggtgctaagagaaa-agttcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcaaacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17323449 315 + 46275980 aattggaaaccaactccaaagggaaccttcaaaaccatacaaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattatttgaactgaataataatagtgacacaacctatcaaaaccccagggatacagcaaaagtggtgctaagagaaa-agttcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcaaacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3262476 315 - 13858734 aattggaaaccaactccaaagggaaccttcaaaaccatacaaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctatcaaaacttcagggatacagcaaaagtggtgctaagagaaa-agttcgtagcattaaatgcctccattgaaatgtctaaaagagcacacatagactatcaaaggtcaaacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4445245 316 + 32716333 aattggaaaccaactccaaagggaaccttcaaaaccatacaaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacaaaacctatcaaaacctcagggatacagcaaaagtggtgctaagaggaatagttcatagtattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcatacctcatggaactagagaaacaagaacaatccaaacctaaacccagcagaagaaaag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155400528 309 - 185818997 aattggaaaccaactctaaagggaaccctcaaaaccatacgaatacatggaaattaaataacctgctcctgagtgatacttgggtcaataatgagatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctgtcaaaacctcagggatacagcaaaagcggtgctaagagaaa-agttcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcacacctcatggaactagagaaacaagaac------aacccaaacccagcagaagaaaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162225091 309 - 192294377 aattggaaaccaactctaaagggaaccctcaaaaccatacgaatacatggaaattaaataacctgctcctgagtgatacttgggtcaataatgagatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctgtcaaaacctcagggatacagcaaaagcggtgctaagagaaa-agttcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcacacctcatggaactagagaaacaagaac------aacccaaacccagcagaagaaaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8705764 309 + 9440265 aattggaaaccaactctaaagggaaccctcaaaaccatacgaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgagatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctgtcaaaacctcagggatacagcgaaagtggtgctaagagaaa-agttcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcacacctcaaggaactagagaaacaagaac------aacccaaacccagcagaagaaaag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8434866 302 + 21915920 gattggaaaccaactctaaagggaaccctcaaaaccatatgaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctatcaaaacctcagggatacagcaaaagcggtgctaagag-ac-agttcatagcactaaatccctacatcaaaatgtctaaaagagcacacgtagactatcaaaggtcacacctcatggaactaaaga------aac------aacccaaacccagcagaagaaaag i cerAty1.NW_012002954v1 C 0 I 347 s chlSab2.chr2 15009732 302 - 90373283 aattggaaaccaactctaaagggaaccctcaaaaccatacgaatacatggaaattaaacaacctcctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactaaataataatagtgacacaacctatcaaaacctcagggatacagcaaaagcggtgctaagag-ac-agttcatagcactaaatgcctacatcaaaatgtctaaaagagcacacatacactatcaaaggtcacaccttatggaactaaaga------aac------aacccaaacccagcagaagaaaag i chlSab2.chr2 C 0 I 338 s manLeu1.NW_012102865v1 2189103 302 + 4234846 gattggaaaccaactctaaagggaaccctcaaaaccatatgaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacctatcaaaacctcagggatacagcaaaagcggtgctaagag-ac-agttcatagcactaaatccctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcacacctcatggaactaaaga------aac------aacccaaacccagcagaagaaaag i manLeu1.NW_012102865v1 C 0 I 352 s colAng1.NW_012120598v1 193532 309 - 13750039 aattggaaaccaactctaaagggagccctcaaaaccatacgaatacatggaaattaaataacctgctcctgagtgatacttgggtcaacaatgaaatcaagacataaatttaaaaattctttgaactgaataataatagtgacacaacttatcaaaacctcagggatacagccaaagcagtgctaagagaaa-cattcatagcattaaatgcctacatcaaaatgtctaaaagagcacacatagactatcaaaggtcacagctcatggaactagagaaacaagaac------aacccaaacccagcagaagaaaag i colAng1.NW_012120598v1 I 310 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=14960069.000000 s hg38.chr21_KI270874v1_alt 72375 2660 + 166743 aaataacaaagaccagtgcagagctaaatgaaattgaaac-caaaaaaatacaaaagatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaaaaggagatattacaaatggtaacaaagtaatacaaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctaaattaaaccagaaagatacagaatctctgaacagaccagtaaaaagcagtgagattgaaatggtaac-caaaaaaatgc---caacaacaaaaaaaa-----tagtaccagatggattcacagctgaattctatc-aacattcaaagaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaagactacagaccaatatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcaaggatagtttaacatctgcaaggcaataaatgtgatacactacataaacagaattaaaaacaaaaattacataatcatctcaatagatgcaggaaagcatttgacaaaatccaacaccacttttgattaaagccctcagcaaaattggcatacatgggacacaccttaaggtaataaaagctagtaatatctatgacaaactcacagccaatgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacaagacaagggtgcccactttcaccacttctatt-aacata--ctattggaagtcctagccagaacaatcagacaaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatgatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcagcaaagtttcaggatacaaaatcaaggtacacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccctttcacaacagctgcaaaaa-atatatatatatttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaatactgctgaaagaaatcatagatgacataaacaaatggaaacatatcccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcagcgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaagtcatatggaaccaaaaaagagcccatatatccaaagcaagactaagcaaaaagaacaaatctgtaggcatcacattacctgacttcaggcaatactataagaccatagtcaccaaaatagcatggtactggtataaaaataggcacacagaccaacggaaaagaatagaaaacccagaaataaacccaaatacttagcgccaactgatcttcaacaaagcaaacaaaaacttaaagtggggaaaggacaacctattcaacaaatggtgttgggataatcggcaagccacatgtagaagattgaaactggatcctcatctctcaccttatacaaaaatcaattcaaaatggatcaaacacttaaatctaagacctgaaaccataaagattctagaagataacattggaagaacccctctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaataaagataaataaataggacttaaactaaaaagcttctgcacagcaaaagaaataatcagcagagttaacagaaaacccacagagtgagagaaaaccttcgcaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaaga-taaaaagaagcaatcccatcaaaaagtgggctaaggacatgaatagacaattgtcaaaacaagatatacaaatggccaacaaacacatggaaaaatgctcaacatcactaatgatcagggagatgcaaatcaaaactgcagtgtaataccacctcactcctacaagaatggccataatcaaaatagatgctggcacagatatagctaaaacggaacacttttacattgttggtgggaatgtaaactagtacaaccactatgggaaacagtgtggaaattctttaaagaactaaaagtagatctactgtttgatccagcaattccactactaggtatctagccagaggaaaagaagtcattatac--aaaaaaagatacttgcacacacatatttatagcagcacattttgaaatggcaaaaaatatgaaaatagcccaaatgcccatcaatcaatgagtagataaaaaaaattgtgtgtgtgtgtgtg--tatatataca-- s panTro5.chr21 3696860 2652 + 33445071 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaaaaaatacaaaagatatatgaaacaaaaagctggttctttgaaaagaaaagcaatattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaaaaggagatattacaaatggtaacaaagaaatacaaaagattattcaaggctactatgaacagctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctaaattaaaccagaaagatatagaatctctgaacagaccagtaaaaagcagtgagattgaaatggtaac-aaaaaaaatgc---caacaacaacaaaaa------attacc-gatggattcacagctgaattctatc-aacattcaaagaagaattggtaccaatcttatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaagactacagaccaatatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcaacgatagtttgccatctgcaaggcaataaatgtgatacactacataaacagaattaaaaacaaaaatcacataatcatctcaatagatgcaggaaagcacttgacaaaatccaacaccacttttgattaaagccctcagcaaaattggcatacatgggacacaccttaaggtaataaaagctagtaatatctatgacaaactcacagccaatgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacaagacaaggatgcccactttcaccacttctatt-aacata--ctattggaagtcctagccagaacaatcagacaaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatgatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcagcacagtttcaggatacaaaatcaaggtacacaaatcagtaggtctgttacaccaacagcgacaagatgagaatcaaatcaagaactcaacccctttcacaacagctgccaaag-acatatatatatttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaatactgctgaaagaaatcatagatgacataaacaaatggaaacatatcccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcaacgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaagtcatatggaaccaaaaaagagcccatatatccaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaatactataagaccatagtcaccaaaatagcatggtactggtataaaaataggcacacagaccaacggaaaagaatagaaatcccagaaataaaaccaaatacttagcgccaactgatcttcaacaaagcaaacaaaaacttaaagtggggaaaggacaacctattcaacaaatggtgttgggataatcggcaagccacatgtagaagattgaaactggatcctcatctctcaccttatacaaaaatcaattcaaaatggatcaaacacttaaatctaagacctgaaaccataaagattctagaagataacattggaagaacccctctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttccgcacagcaaaagaaataatcagcagagttgacagataacccacagagtgagagaaaatcttcgcaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaaga-taaaaagaagcaatcccatcaaaaagtgggctaaggacatgaatagacaattgtcaaaagaagatatacaaatggccaacaaacacatggaaaaatgctcaacatcactaatgatcagggagatgcaaatcaaaactgcagtgtaataccacctcactcctacaagaatggccataatcaaaatagatgctggcacagatgcagctaaaagggaacacttttacactgttggtgggaatgtaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaattccactactaggtatctagccagaggaaaagaagtcattacac--aaaaaaagatacttgcacacacatatttatagcagcacattttgaaatggcaaaaaatatgaaaatagcccaaatgcccatcaatcaatgagtagat-aaaaaaactgtgtgtgtgtgtg--------tataca-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17323764 2649 + 46275980 aaataacaaagaccagtgcagagctaaatgaaattgaaac-aaaaaaaatacaaaagatatatgaaacaaaaagctggttctttgaaaagaaaagcaatattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaaaaggagatattacaaatggtaacaaagaaatacaaaagattattcaaggctactatgaacagctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctaaattaaaccagaaagatatagaatctctgaacagaccagtaaaaagcagtgagattgaaatggtaac--aaaaaaatgc---caacaacaacaaaa-------attacc-gatggattcacagctgaattctatc-aacattcaaagaagaattggtaccaatcttatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaagactacagaccaatatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcaacgatagtttgccatctgcaaggcaataaatgtgatacactacataaacagaattaaaaacaaaaatcacataatcatctcaatagatgcaggaaagcatttgacaaaatccaacaccacttttgattaaagccctcagcaaaattggcatacatgggacacaccttaaggtaataaaagctagtaatatctatgacaaactcacagccaatgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacaagacaaggatgcccactttcaccacttctatt-aacata--ctattggaagtcctagccagaacaatcagacaaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatgatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcagcaaagtttcaggatacaaaatcaaggtacacaaatcagtaggtctgttacaccaacagcgacaagatgagaatcaaatcaagaactcaacccctttcacaacagctgccaaag-atatatatatatttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaatactgctgaaagaaatcatagatgacataaacaaatggaaacatatcccatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcaacgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaagtcatatggaaccaaaaaagagcccatatatccaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaatactataagaccatagtcaccaaaatagcatggtactggtataaaaataggcacacagaccaacggaaaagaatagaaatcccagaaataaaaccaaatacttagcgccaactgatcttcaacaaagcaaacaaaaacttaaagtggggaaaggacaacctattcaacaaatggtgttgggataatcggcaagccacatgtagaagattgaaactggatcctcatctctcaccttatacaaaaatcaattcaaaatggatcaaacacttaaatctaagacctgaaaccataaagattctagaagataacattggaagaacccctctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttccgcacagcaaaagaaataatcagcagagttaacagataacccacagagtgagagaaaatcttcgcaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaaga-taaaaagaagcaatcccatcaaaaagtgggctaaggacatgaatagacaattgtcaaaagaagatatacaaatggccaacaaacacatggaaaaatgctcaacatcactaatgatcagggagatgcaaatcaaaactgcagtgtaataccacctcactcctacaagaatggccataatcaaaatagatgctggcacagatgcagctaaaagggaacacttttacactgttggtgggaatgtaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaattccactactaggtatctagccagaggaaaagaagtcattatac--aaaaaaagatacttgcacacacatatttatagcagcacattttgaaatggcaaaaaatatgaaaatagcccaaatgcccatcaatcaatgagtagat-aaaaaaactgtgtgtgtgtgtg--------tataca-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3262791 2663 - 13858734 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaaaaaatacaaaagatatatgaaacaaaaagctgattctttgaaaagaaaagcactattgatagaccattagcaagattaacgaagaaaagaagagagaagatccaagtaagctcaattagaaacaaaaaaggagatattacaaatggtaacaaagaaatacaaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctagattaagccagaaagatatagaatctctgaacagaccagtaaaaagcaatgagattgaaatggtaacaaaaaaaaatgc---caacaacaaaaaaaa-----tagtaccagatggattcacagctgaattctatc-aacattcaaagaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaacaacataacaaaaaaagaagactacaggccaatatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaggataattcaccatgatcaagtgggtttcaaca--gggatgcaagaatagtttaacatctgcaaggcaataaatgtgatacactacataaacagaattaaaaacaaaaatcacataatcatctcaatagatgcaggaaagcatttgacaaaatccaacaccacttttgattaaagccctcagcaaaactggcatatatgggacacaccttaaggtaataaaagctagtaatatctatgacaaactcacagccaatgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacaagacaaggatgcccactttcaccacttctatt-aacata--ctattggaagtcctagccagaacaatcagacaaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatgatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcagcaaagtttcaggttacaaaatcaaggtacacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaacccaacccctttcacaacagctgcaaaaa-atatatatatatttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaatactgctgaaagaaatcatagatgacataaacaaatggaaacatatcacatgctcatggatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaagtcatatggaaccaaaaaagagcccatatatccaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaatactataagaccatagtcaccaaaatagcatggtactggtataaaaataggcacacagaccaacggaaaagaatagaaaacccagaaataaacccaaatacttagcgccaactgatcttcaacaaagcaaacaaaaacttaaagtggggaaaggacaacctattcaacaaatggtgttgggataatcggcaagccacatgtagaagattgaaactggatcctcatctctcaccttatacaaaaatcaattcaaaatggatcaaacacttaaatctaagacctgaaaccacaaagattctagaagataacattggaagaacccctctatacattgtcttaggctaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataagacttaaactaaaaagcttctgcacagcaaaagaaataatcagcaaagttaacagataacccacagagtgagagaaaatcttcacaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaaga-taaaaagaagcaatcccatcaaaaagtgggctaaggacatgaatagacaattctcaaaagaagatatacaaatggccaacaaacacatggaaaaatgctcaacatcactaatgatcagggaaatgcaaatcaaaactgcagtgtaataccatatcactcctacaagaatggccataatcaaaatagatgctggcacagatgcagctaaaaggcaacacttttacactgttggtgggaatgtaaactagtacaaccactgtgggaaacagtgtggagattctttaaagaactaaaagcagatctactgtttgatccagcaactccactactaggtatctagccagaggaaaagaagtcattatac--aaaaaatgatacttgcacacacatatttatagcagcacattttgaaatggcaaaaaatatgaaaatagcccaaatgcccatcaatcaatgagtagat-aaaaaaattgtgtgtgtgtgtgtgtatatatataca-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4445561 2656 + 32716333 aaataacaaagaccagtgcagagctaaatgaaactgaaac-caaaaaaatacaaaagatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaataaaacaggagatattacaaacgataacaaggaaatacaaaagactattcaaggctactatgaacacctttatgtgcacaaactaggaaacctagaggagatggatgaattcctggaaacatacaaccctcctagattaaaccagaaagatatagaatctctgaacagatcagtaaaaagcagtgagattgaaacggtaac--aaaaaaatgc---caacaacaaaaaaaa------agtaccagacggattcacagctgaattctatcaaatattcaaagaagaattggtaccaatcctatagaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaatactagaaaagaacataacaaaaaaagaagactacagaccagtatccctgatgaatatagaggtaaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggcttcaaca--gggatgcaaggatagtttaacatctgcaagccaataaatgtgatacactacataaacagaattaaaagcaaaaatcacataatcatctcaatagatgcaggaaagcatttgacaaaatccaacaccccttttgattaaagtcctcagcaaaattggcatacacgggacacaccttaaggtaataaaaactagtaatatctatgacaaactcacagccaacgttatattgaatggggaaaagttgaaagcattttctgtgagaactggaacgagacaaggatgcccactttcaccacttctattgaacata--ctattggaagtcctagccagaacaatcagacgaagagaaagaaataaagggcatccaaatcagtaaagatgaagtcaaactgttgctgtttgcagatgatatgatcatatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcagcaaagtttcaggataaaaaattaaggtacacaaatcagtaggtctgctacaccaacagcaacaagatgagaatcaaatcaagaactcaacccctttcacaatagctgcaaaaatatatacatatatttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactacaaaatactcgtgaaagaaatcatagatggcataaacaaatggaaacatatcccatgctcatgaatgggtagaatcaatattgtgaaaatgaccatactgccaaaatcaatctagaaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaagccatatggaaccaaaaaagagcccacatatccaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaatactataagaccatagtcaccaaaatagcatggtactggtataaaaataggcacacagaccaatggaacagaatagaaaacccagaaataaacccaaatacttacagacaactgatcttcgacaaagcaaacaaaaacatagagtggggaaaggacaacctattcaacaaatggtattgggataatcggcaagccatatgtagaagattgaaactggatcctcatctctca-ctcattcaaaaatcaattcaagatggatcaaacacttaaatctaagacctgaaaccataaagattctagaagataacattggaagaacgcttctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcacagcaaaagaaataatcagcagagttaacagataacccacagagtgagagaaaatctttgcaatctatacatccaacaaaggactaatatccggaatctacaaagaactgaaacaaatcagcaaga-taaaaacaagcaatcccatcaaaaagtgggctaaggacataaatagacaattctcaaaagaagatatacaaatggccaacaagcatgtggaaaaatgctcaacattactaatgatcagggaaatgcaaatcaaaactgcaatgcaataccacctcactcctacaagaatggccataatcaaaatagatgctggcacagatgcagctaaaagagaacacttttatactgttgatgggaatgtaaactagtaccaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccaccactaggtatctagccagaagaaaagaagtcattatac--aaaaaaagatacttgcacacacatatttatagcagcatattttgaaatggc-aaaaatatgaaaacagcccaaatgcccatcaaacaatgagtagat-aaagaaattgtgtgtgtgtgtg----tgtgtatata-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155400837 2663 - 185818997 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaacaaatacaaaaaatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaatacgctcaattagaaacaaaacaggagatattaccaatgataacaaagaaatacaaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctactagattaaatcagaaacatatagaatctctgaacagaccaataaaaagcagtggaatttaaatggtaataaaaacaaatgc---caacaacaacaacaacaaaataggaccaaatggattcacagcttaattctatcagacattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccatagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatccaataccccttttgattaaagccctcagcaaaatcggcatacatgggacataccttaaggtaataaaagctagtaatatctatgacaaactcccaagcaatgttatatggaatggggagaagttaaaagcattttctctgagaactggaacaagacaaggatgcctactttaatcacttctattgaacataatctactggaagtcctagccagaacaatcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaagtcaaactgttgctgtttgcagatgatatgatcatatatccagaaaaccctaaagattcatgcaaaaagctcctagtactgaataatgaattcatcaaagtttcaggataccaaattaaggtacacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaaa-----caaaatacttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatactcacggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctggaattcacatggaaccaaaaaagagcccacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagataacactgtaagaccatagtcaccaaaacagcatggcactggtataaaaataggcacatagaccaatggaacagaatagaaaacctggaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtgggaaaaggacaacctattcaacaaatgatgttgggataatcggcaagccacaagtagaagactgaagctggatcctcatctctcaccttatacaaaaatcaattcaagatggatctaacacttaaatctaagacctgaaaccataaagattctaggagataacatcggaaggccccttctatacattgtcttaggcaaagacttcatgacttagaatcaaaacgcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcactgcaaaagaaataatcagcagagttaacagacaacccacagagtgagagaaaatcttcacaatctatacatccaacaaaggactaatatccgcaatctacaaagaactgaaacaaatcagcaaga-taaaaacaagcaattccatcaaaaagtgggcaaaggacatgaatagacaatgctcaaaagaagatatacaaatggccagcaagcatatggaaagatgctcaacataactaatgatcagggaaatgcaaatcaaaaccgcaatgtaatactacctcactcctacaagaatggcaataatcaaaatagatgctggcacagatgcggctaaaagggaacatttttacactgttggtgggaatgtaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaagaagtcattatac-aaaaaaaagatacttgcacacacatatttatagcaacacattttgtaattgc-aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaattgtgtgtgcgtgtg----cgtatatatata i rheMac8.chr3 C 0 I 59 s macFas5.chr3 162225400 2659 - 192294377 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaacaaatacaaaaaatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaacaggagatattaccaatgataacaaagaaatacaaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctactagattaaatcagaaacatatagaatctctgaacagaccaataaaaagcagtggaatttaaatggtaataaaaacaaatgc---caacaacaacaacaacaaaataggaccaaatggattcacagcttaattctatcagacattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataac----aaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccatagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatccaataccccttttgattaaagccctcagcaaaatcggcatacatgggacataccttaaggtaataaaagctagtaatatctatgacaaactcccagccaatgttatatggaatggggagaagttaaaagcattttctctgagaactggaacaagacaaggatgcctactttaatcacttctattgaacataatctactggaagtcctagccagaacaatcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaagtcaaactgttgctgtttgcagatgatatgatcatatatctagaaaaccctaaagattcatgcaaaaagctcctagtactgaataatgaattcatccaagtttcaggataccaaattaaggtacacaaatcagtagatctgctacaccaacagtgacaagatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaaa-----caaaatacttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatactcatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctggaattcacatggaaccaaaaaagagcccacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagataacactgtaagaccatagtcaccaaaacagcatggcactggtataaaaataggcacatagaccaatggaacagaatagaaaacctggaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtgggaaaaggacagcctattcaacaaatgatgttgggataatcggcaagccacaagtagaagactgaagctggatcctcatctctcaccttatacaaaaatcaattcaagatggaccaaacacttaaatctaagacctgaaaccataaagattctaggagataacatcggaaggccccttctatacatcgtcttaggcaaagacttcatgacttagaatcaaaacgcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcactgcaaaagaaataatcagcagagttaacagacaacccgcagagtgagagaaaatcttcacaatctatacatccaacaaaggactaatatccgcaatctacaaagaactgaaacaaatcagcaaga-taaaaacaagcaattccatcaaaaagtgggcaaaggacatgaatagacaatgctcaaaagaagatatacaaatggccagcaagcatatggaaagatgctcaacataactaatgatcagggaaatgcaaatcaaaaccgcaatgtaatactacctcactcctacaagaatggcaataatcaaaatagatgctggcacagatgcggctaaaagggaacatttttacactgttggtgggaatgcaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaagaagtcattatac-aaaaaaaaaatacttgcacacacatatttatagcaacacattttgtaattgc-aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaattgtgtgtgcgtgtg----agtatatatata i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8706073 2655 + 9440265 aaataacaaagaccagtgcagag-taaatgaaattgaaacaaaaacaaatacaaaaaatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaacaggagatattaccaatgataacaaagaaatacaaaagattattcaaggctgctatgaacacctttatgtgcacaaactagaaaacctagaggagatggatacattcctggaaacatataaccctactagattaaatcagaaacatatagaatctctgaacagaccaataaaaagcagtggaatttaaatggtaataaaaacaaatgc---caacaacaacaacaacaaaataggaccaaatggattcacagcttaattctatcagacattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaaga-------aatcctccctaaatcattctatgaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccacagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatctgacaaaatccaataccccttttgattaaagccctcagcaaaatcggcatacatggggcataccttaaggtaataaaagctagtaatatctatgacaaactcccagccaatgttatatggaatggggagaagttaaaagcattttctctgagaactggaacaagacaaggatgcctactttaatcacttctattgaacataatctactggaagtcctagccagaacaatcagac-aagagaaagaaaaaaagggcatccaaatcagtaaaaaggaagtcaaactgttgctgtttgcagatgatatgatcatacatctagaaaaccctaaagattcatgcaaaaagctcctagtactgaataatgaattcatcaaagtttcaggataccaaattaaggtacacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaaa-----caaaatacttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatactcatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctggaattcacatggaaccaaaaaagagcccacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagataacactgtaagaccatagtcaccaaaacagcatggcactggtataaaaataggcacatagaccaatggaacataatagaaaacctggaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtgggaaaaggacaacctattcaacaaatgatgttgggataatcggcaagccacaagtagaagactgaagctggatcctcatctctcaccttatacaaaaatcaattcaagatggatcaaacacttaaatctaagacctgaaaccataaagattctaggagataacatcggaaggccccttctatacattgtcttaggcaaagacttcatgacttagaatcaaaacgcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcactgcaaaagaaataatcagcagagttaacagacaacccacagagtgagagaaaatcttcacaatctatacatccaacaaaggactaatatccgcaatctacaaagaactgaaacaaatcagcaaga-taaaaacaagcaatcccatcaaaaagtgggcaaaggacatgaatagacaatgctcaaaagaagatatacaaatggccagcaagtatatggaaagatgctcaacataactaatgatcagggaaatgcaaatcaaaaccgcaatgtaatactacctcactcctacaagaatggcaataatcaaaatagatgctggcacagatgcggctaaaagggaacatttttacactgttggtgggaatgtaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaagaagtcattatac-aaaaaaaagatacttgcacacacatatttatagcaacacattttgtaattgc-aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaattgtgTGTGCGTGTG----Catatatatata i macNem1.NW_012019910v1 C 0 I 62 s cerAty1.NW_012002954v1 8435515 2663 + 21915920 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaacaaatacaaaagatatataaaacaaaaagctggttatttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaacaggagatattacaaatgataacaaagaaatataaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctagattaaaccagaaagatatagaatctctgaacagaccagtaaaaagcagtgagattgaaatggtaataaaaacaaatgccaacaacaacaacaacaacaaaataggatcaaatggattcacagttgaattctat----gattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctaggaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcgacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccatagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatccaacaccccttttgattaaagccctcagcaaaatcggcatacatgggacataccttaaggtaataaaaggtagtaatatctatgacaaactaccagccaatgttatatggagtggggaaaagttgaaagcattttctctgagaactggaacaagacaaggatgcctactttaatcacttctattgaacataatctactggaagtcctagccagaacaagcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaaatcaaactgttgttgtttgcagatgatatgatcacatacctagaaaaccctaaagattcatgcaaaaagctgctagtactgaataatgaattcatcaaagtttcaggatacaaaattaacgggcacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaac-----caaaatacttaggaatatacctaaccaaggaggtgaaagacctctacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatactcatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctacaattcacatggaaccaaaaaagagcccacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagataacactgtaagaccatagtcaccaaaacagcatggcactggtataaaaataggcacatagaccaatggaacagaatagaaaacccggaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtgggaaaaggacaacctattcaacaaatgatgttgggataatcggcaagccacaagtagaagactgaagctggatcctcatctctcaccttatacaaaaatcaattcaagatggatcaaacacttaaatctaagacctgaaaccataaagattctaggagataacatcggaaggctccttctatacattgtcttaggcaaagacttcatgacttagaatcaaaatgcagatgtaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcaccgcaaaagaaataatcagcagagttaacagacaacccacagagtgagagaaaatcttcacaatctatatatccaacaaaggactaatatccgcaatctacaaagaactgaaacaaatcagcaagattaaaaacaagcaattccatcaaaaagtgggcaaaggacatgaatagacaatgctcaaaagaagatatacaaatggccagcaagcatatggaaagatgctcaacataactaatgatcagggaaatgcaaatcaaaaccgcaatgtaatactacctcactcctacaagaatggcaataatcaaaatagatgctggcacagatgcagctaaaagggaacatttttacactgttggtaggaatgtaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaagaagtcattatac-aaaaaaaagatacttgcacacacatatttatagcaacacattttgtaattgc-aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaattgtgtgtgcgtgtg----tgtatatatata i cerAty1.NW_012002954v1 I 347 I 48 s chlSab2.chr2 15010372 2662 - 90373283 aaATAACAAAgaccagtgcagagctaaatgaaattgaaacaaaaacaaatacaaaagatatataaaacaaaaagctggttctttgaaaagaaaagcactattgatagacaattagcaagattaaccaagaaaagaatagagaagatccaaataagctcaattagaaacaaaacaggagatattacaaatgataacaaataaatataaaagattattcaaggctactatgaacatctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctagattgaaccagaaagatatagaatctctgaacagaccaataaaaagcagtgagattgaaatggtaataaaaacaaatgc---caacaacaacaacaacaaaataggatcaaatggattcacagttgaattctat----cattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctaggaagccagtatcaccttaataccaaaaccagaaaagaacataacaaaaaaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaacagggggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccaaagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatccaacaccccctttgattaaagccctcagcaaaatcggcatacatgggacataccttaaggtaataaaaggtagtaatatctatgacaaactaccagccaatgttatatggaatggggaaaagttgaaagcattttctctgagaactggaacaagacaaggatgcctactttaatcacttctattgaacatattctactggaagtcctagccagaacaagcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaaatcaaactgttgttgtttgcagatgatatgatcacatacctagaaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcatcaaagtttcaggatacaaaattaaggtacacaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaaa-----caaaatacttaggaatatacctaaccaaggaggtgaaagaccactacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatacttatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctagaattcacatggaaccaaaaaagagcctacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaacactgtaagaccatagtcaccaaaatagcatggcactggtataaaaataggcacatcgaccaatggaacagaatagaaaacccagaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtggggaaaggacaacctattcaacaaatggtgtcgggataatcggcaagccacaggtagaagattaaagctggatcctcatctcccaccttatacaaaaatcaattcaagatggatcaaacacttaaatctaagacctgaaaccataaagattctaggagataacattggaaggacccttctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcacagcaaaagaaataatcagcagagttaacagacaacccacagagtgagagaaaatcttcacaatctatacatccaacaaaggactaatatccacaatctacaaagaactgaaacaaatcagcaaga-taaaaacaagcaattccatcaaaaagtgggtgaaggacatgaatagacaatgctcaaaagaagatatacaaacggccagtaagcatatggaaagatgctcaacattactaatgatcagggaaatgcaaatcaaaactgcaacgtaataccacctcactcctacaagaatggcaataatcaaaatagatgctggcacagacgcagctaaaagggaacatttttacaccgttggtgggaatgttaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaagaagtcatcatacaaaaaaaaagatacttgcacacacatatttatagcagcacattttgcaattgc-aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaattgtgTGTGCGTGTG----TGTGtatatata i chlSab2.chr2 I 338 I 25 s manLeu1.NW_012102865v1 2189757 2659 + 4234846 aaataacaaagaccagtgcagagctaaatgaaattgaaacaaaaacaaatacaaaagatatataaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccaagaaaagaagagagaagatccaaataagctcaattagaaacaaaacaggagatattataaatgataacaaagaaatataaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatacaaccctcctagattaaaccagaaagatatagaatctctgaacagaccaataaaaagcagtgagattgaaatggtaataaaaacaaatgccaacaacaacaacaacaacaaaataggatcaaatggattcacagttgaattctat----cattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaagaaagagggaatcctccctaaatcattctaggaagccagtatcaccttaataccaaaaccggaaaagaacataacaaaaaaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcagggatagtttaacatctgcaagtcaataaatgtgatacactccatagacagaattaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatctaacaccccttttgattaaagccctcagcaaaatcagcatacatgggacataccttaaggtaataaaaggtagtaatatctatgacaaactaccagccaatgttatatggaatggggaaaagttgaaagcattttctctgagaactggaacaagacaaggatgcctactttaatcacttctattgaacataatctactggaagtcctagccagaacaagcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaaatcaaactgttgttgtttgcagatgatatgatcacatacctaggaaaccctaaagactcatgcaaaaagctcctagtactgaataatgaattcatcaaagtttcaggatacaaaattaacgggcgcaaatcagtaggtctgctacaccaacagcgacaagatgagaatcaaatcaagaactcaacccttttcacaatagctgcaaaac-----caaaatacttaggaatatacctaaccaaggaggtgaaagacctctacaaggaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacatcccatactcatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccatcaaaataccaccatcattcttcacagaactaggaaaaacaattctacaattcacatggaaccaaaaaagagcccacatatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagataacactgtaagaccatagtcaccaaaacagcatggcactggtataaaaataggcacatagaccaatggaacagaatagaaaacccggaaataaacccaaatacttacagctaactgatcttcgacaaagcaaacaaaagcataaagtgggaaaaggacaacctattcaacaaatgat---gggataatcggcaagccacaagtagaagactgaagctggatcctcatctctcaccttatacaaaaatcaattcaagatggatcaaacacttaaatctaagacctgaaaccataaagattctaggagataacatcggaaggccccttctatacattgccttaggcaaagacttcatgacttagaatcaaaacgcagatgtaacaaaaacaaagataaataaataggacttaaactaaaaagcttctgcaccgcaaaagaaataatcagcagagttaacagacaacccacagagtgagagaaaatcttcacaatctatatatccaacaaaggactaatatccgcaatctacaaagaactgaaacaaatcagcaaga-taaaaacaagcaattccatcaaaaagtgggcaaaggacatgaatagacaatgctcaaaagaagatatacaaatggccagcaagcatatggaaagatgctcaacataactaatgatcagggaaatgcaaatcaaaaccacaatgtaatactacctcactcctacaagaatggcaataatcaaaatagatgctggcacagatgcggctaaaagggaacatttttacactgttcgtaggaatgtaaactagtacaaccactatgggaaacagtgtggagattctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagaggaaaataagtcattatac-aaaaaaaagatacttgcacacacatgtttatagcaacacattttgtaattgc-aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaattgtgtgtgcgtgtg----tgtatatacATA i manLeu1.NW_012102865v1 I 352 I 15 s colAng1.NW_012120598v1 193841 2650 - 13750039 aaataaaaaagaccagtgcagagctaaatgaaattgaaac-aaaacaaatacaaaagatatatgaaacaaaaagctggttctttgaaaagaaaagcactattgatagaccattagcaagattaaccgagaaaaaaagagagaagatccaaataagctcaattagaaacaaaacaggagatattaccaatgatagcaaagaaatacaaaagattattcaaggctactatgaacacctttatgtgcacaaactagaaaacctagaggagatggataaattcctggaaacatgcaaccctcctagattaaaccagaaagatatagaatctctgaacagaccaataaaaagcagtgagatttaaatggtaataaaaacaaatgc------caacaacaacaacaaaataggaccaaatgaattcacagctgaattctatcagacattcaaggaagaattggtaccaatcctatggaaaccatttcaaaagataaaga----ggaaatcctccctaaatcattctttgaagccagtatcaccttaataccaaaaccagaaaagaccataacaaaaaaagaaaactacagaccaatatccctgatgaatatagatg-aaaaatcctcaacaaaatactagtgaaacaaatccaacagcatatcaaaaagataattcaccatgatcaagtgggtttcaaca--gggatgcagggatagtttaacatctgcatgtcaataaatgtgatacactccatagacagaactaaaaacaaaaatcacataatcatctcaatagatacaggaaagcatttgacaaaatccaacaccccttttgattaaagccctcagcaaaatcagcatacatgggacataccttaaggtaataaaagctagtaatatctatggcaaactcccagccaatattatatggaatggggaaaagttgaaagcattttctctgagaactggaacaagacaaggatgcctactgtaatcacttctattgaacata--ctactggaagtcctagccagaacaatcagac-aagagaaagaaataaagggcatccaaatcagtaaagaggaagtcaaactgttgctgtttgcagatgatatgaccatatacctagaaaaacctaaagactcatgcaaaaagctcctagtactgaataatgaattcatcaaagtttcaggatacaaaattaaggtacataaatcaataggtctactacaccaacagcgacaagatgagaatcaaatcaagaattcaacccttttcacaatagctgcaaaaa-----caaaatacttaggaatatacctaaccaaggaggtgaaagaccactacaaagaaaactac-aaattctgctgaaagaaatcatagatgacgtaaacaaatagaaacacattccatactcatggatgggtagaatcaatattgtgaaaatgaccacactgccaaaagcaatctaccaattcaatgcaattcccaccaaaataccaccatcattcttcacagaactaggaaaaataattctagaattcacatggaaccaaaaaagagcccacgtatcaaaagcaagactaagcaaaaagaacaaatctggaggcatcacattacctgacttcagacaacactataagatcatagtcaccaaaatagcatggcactggtataaaaataggcacatagaccaatggagcagaatagaaaacctagaaataaacccaaatacttacagctaactgatcttcgacaaagaaaacaaaagcataaagtggggaaaggacaacccattcaacaaatggtgttgggataatcagcaagccacatgtagaagattgaagctggatcctcatctctcaccttatacaaaaatcaattcaagatggatcaaacacttaaatctaagacctgaaaccataaagattctaggagataacttcggaaggacccttctatacattgtcttaggcaaagacttcatgacttagaatccaaaagcagatgcaataaaaacaaagataaataaataagacttaaaccaaaaagcttctgcaccgcaaaagaaataatcagcagagttaacggacaacc--cagagtgagagaaaatcttcacagtctatacatccaacaaaggactaatatccacaatctacaaagaactgaaacaaatcagcaaga-taaaaacaagcaattccatcaaaaagtgggtgaaggacatgaatagacaatgctcaaaagaagatatacaaatggccagcaagcatatggaaagatgctcaacattactaatgatcagggaaatgcaaatcaaaaccgcaatgtaatactacctcactcctacaagaatggtaataatcaaaatagatgctggcacagatgcggctaaaagggaacatttttacactgttggtgggaatgtaaactagtacaaccactatgggaaacaatatggagatcctttaaagaactaaaagtagatctactgtttgatccagcaatcccactactaggtatctagccagagaaaaagaagtcattatac--aaaaaaagatacttgcacacacatatttagagcagcacattttgcaattgc-aaaaatttgaaaacagcccaaatgcccatcagtcaatgagtagat-aaagaaattgtgtgtgtgtgtg----tatatatataca i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=19826.000000 s hg38.chr21_KI270874v1_alt 75035 15 + 166743 tatatatataaagaa s panTro5.chr21 3699512 15 + 33445071 tatatatataaagaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326413 15 + 46275980 tatatatataaagaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265454 15 - 13858734 tatatatataaagaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448217 15 + 32716333 catatatataaagaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162228059 13 - 192294377 --cacacacattata i macFas5.chr3 C 0 I 2 s chlSab2.chr2 15013059 15 - 90373283 tatatatatatagta i chlSab2.chr2 I 25 I 31 s manLeu1.NW_012102865v1 2192431 15 + 4234846 tatatatatatagta i manLeu1.NW_012102865v1 I 15 I 22 s colAng1.NW_012120598v1 196491 7 - 13750039 ----cacacat---- i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e cerAty1.NW_012002954v1 8438178 48 + 21915920 I e macNem1.NW_012019910v1 8708728 62 + 9440265 I e rheMac8.chr3 155403500 59 - 185818997 I a score=7798.000000 s hg38.chr21_KI270874v1_alt 75050 12 + 166743 at-------tgtgtgtgta s panTro5.chr21 3699527 12 + 33445071 at-------tgtgtgtgtg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326428 19 + 46275980 attagtgtgtgtgtgtgtg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265469 12 - 13858734 at-------tgtgtgtgtg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448232 12 + 32716333 at-------tgtgtgtgtg i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162228074 12 - 192294377 -------tatatatatata i macFas5.chr3 I 2 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e colAng1.NW_012120598v1 196498 0 - 13750039 C e cerAty1.NW_012002954v1 8438178 48 + 21915920 I e macNem1.NW_012019910v1 8708728 62 + 9440265 I e manLeu1.NW_012102865v1 2192446 22 + 4234846 I e chlSab2.chr2 15013074 31 - 90373283 I e rheMac8.chr3 155403500 59 - 185818997 I a score=-11275.000000 s hg38.chr21_KI270874v1_alt 75062 6 + 166743 tg------------------------------------------------------------------tata s panTro5.chr21 3699539 6 + 33445071 tg------------------------------------------------------------------tata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326447 6 + 46275980 tg------------------------------------------------------------------tata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265481 72 - 13858734 tgtaggtatatatatatatatatatatacatggtatatatatatatatatatataatgtatatatatataca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448244 10 + 32716333 tg--------------------------------------------------------------tatatata i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162228086 6 - 192294377 ------------------------------------------------------------------tatata i macFas5.chr3 C 0 I 11 s cerAty1.NW_012002954v1 8438226 6 + 21915920 ------------------------------------------------------------------tatata i cerAty1.NW_012002954v1 I 48 I 2 s manLeu1.NW_012102865v1 2192468 6 + 4234846 ------------------------------------------------------------------tatata i manLeu1.NW_012102865v1 I 22 I 2 s colAng1.NW_012120598v1 196498 6 - 13750039 ------------------------------------------------------------------tctata i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e macNem1.NW_012019910v1 8708728 62 + 9440265 I e chlSab2.chr2 15013074 31 - 90373283 I e rheMac8.chr3 155403500 59 - 185818997 I a score=9541.000000 s hg38.chr21_KI270874v1_alt 75068 5 + 166743 tatat s panTro5.chr21 3699545 5 + 33445071 tatat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326453 5 + 46275980 tatat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265553 5 - 13858734 tgtat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448254 5 + 32716333 tatat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155403559 3 - 185818997 --tat i rheMac8.chr3 I 59 C 0 s macFas5.chr3 162228103 3 - 192294377 --tat i macFas5.chr3 I 11 C 0 s cerAty1.NW_012002954v1 8438234 3 + 21915920 --AAt i cerAty1.NW_012002954v1 I 2 C 0 s manLeu1.NW_012102865v1 2192476 3 + 4234846 --AAt i manLeu1.NW_012102865v1 I 2 C 0 s colAng1.NW_012120598v1 196504 5 - 13750039 tatat i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e macNem1.NW_012019910v1 8708728 62 + 9440265 I e chlSab2.chr2 15013074 31 - 90373283 I a score=5005.000000 s hg38.chr21_KI270874v1_alt 75073 1 + 166743 a s panTro5.chr21 3699550 1 + 33445071 a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326458 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265558 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448259 1 + 32716333 a i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155403562 1 - 185818997 a i rheMac8.chr3 C 0 I 6 s macFas5.chr3 162228106 1 - 192294377 a i macFas5.chr3 C 0 I 12 s cerAty1.NW_012002954v1 8438237 1 + 21915920 a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15013105 1 - 90373283 a i chlSab2.chr2 I 31 C 0 s manLeu1.NW_012102865v1 2192479 1 + 4234846 a i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 196509 1 - 13750039 a i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I e macNem1.NW_012019910v1 8708728 62 + 9440265 I a score=2055620.000000 s hg38.chr21_KI270874v1_alt 75074 367 + 166743 tatatacaccatggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaagctaagctatgagtgcacaaagacatgagaataatagactggactttggagactcaggggtaagggtgggaatggcaaaagataaaagactgcatattgggtacagtatacactgctcgggtgatgggtgcacccaaatctcagaaatcaccactaaagaacttatccatgtaaccaaacactacctattccccaaaaccctgttggaata-aa----aaataaa s panTro5.chr21 3699551 367 + 33445071 tatacacaccatggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaaactaagctatgagtgcacaaagacataagaataatagactggactttggggactcaggggtaagggtgggaatggcaaaaaataaaagactacatattgggtacagtgtacactgctcgggtgatgggtgcacccaaatctcagaaatcaccactaaagaacttatccatgtaaccaaacactacctattccccaaaaccctgctggaata-aa----aaataaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326459 367 + 46275980 tatacacaccatggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaaactaagctatgagtgcacaaagacataagaataatagactggactttggggactcaggggtaagggtgggaatggcaaaaaataaaagactacatattgggtacagtgtacactgctcgggtgatgggtgcacccaaatctcagaaatcaccactaaagaacttatccatgtaaccaaacactacctattccccaaaaccctgctggaata-aa----aaataaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265559 367 - 13858734 tatatataccatggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaagctaagctatgagtgcacaaagacatgagaataatagactggactttggggactcaggggtaagggtgggaatggcaaaagataaaagactacatattgggtacagtgtacactgctcgggtgatgggtgcacccaaatctcagaaatcaccactaaagaacttatccatgtaaccaaacactacctattccccaaaaccctgttggaata-ca----aaaTAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448260 367 + 32716333 tatatacaccagggactactactaagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaacctaacattgtattttctcactcatatgtggaagctaagctatgagtgcacaaagacataagaataatagactggactttggggactcaggagtaagggagggaatggcaaaagataaaagactacgcattgggtacagtatacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttatccatgtaaccaaacaccacctattccccaaaaccctgttggaata-aa----aaaTAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155403569 368 - 185818997 tatatatattatggaatactactcagccacaaaaaggaacaaaacaatggtattagcagcaatttggatggaattggagacttattctaagtgaacaaactcgggaatggaaaactaaacattgtatgttctcactcctatgtggaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaagggtgggaatggcaacagataaaagactacacattgtgtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattccccaaaaccctgttgaaatgaaa----aaaTAAA i rheMac8.chr3 I 6 C 0 s macFas5.chr3 162228119 367 - 192294377 tatatatattatggaatactactcagccacaaaaaggaacaaaacaatggtattagcagcaatttggatggaattggagacttattctaagtgaacaaactcgggaatggaaaactaaacattgtatgttctcactcctatgtggaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaagggcgggaatggcaaaagataaaagactacacattgtgtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattccccaaaaccctgttgaaatg-aa----aaaTAAA i macFas5.chr3 I 12 C 0 s macNem1.NW_012019910v1 8708790 367 + 9440265 tatatatattatggaatactactcagccacaaaaaggaacaaaacaatggtattagcagcaatttggatggaattggagacttattctaagtgaacaaactcgggaatggaaaactaaacattgtatgttctcactcctatgtggaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaagggcgggaatggcaaaagataaaagactacacattgtgtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttacgcacataaccaaataccacctattccccaaaaccctgttgaaatg-aa----aaaTAAA i macNem1.NW_012019910v1 I 62 C 0 s cerAty1.NW_012002954v1 8438238 371 + 21915920 tatatatattatggaatactactcagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcgggaatggaaaactaaacattgtatgttctcacttatatgtagaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaagggcgggaatggcaaaagataaaagactacacattgtgtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattccccaaaaccctgttgaaata-aaaaaTAAATAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15013106 365 - 90373283 tatatatattatggaatactactcagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatggaaaactaaacattgtatgttctcactcctatgtggaagctaagctatgggggtacaaaaacataagaatgatagactggactttggggactcaggggtaaaggggggaatggcaaaagataaaagactacacattacgtgcagtgtacactgctcgggtgatgggtgcacc-aaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattcccc-aaaccctgttgaaata-aa----aaataaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2192480 371 + 4234846 tatatatattatggaatactactcagccacaaaaaggaacaaaataatggtattagcagcaacttggatggcattggagacttattctaagtgaacaaactcggaaatggaaaactaaacattgtatgttctcacttatatgtggaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaagggcgggaatggcaaaagataaaagactacacattgtgtacagtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaagaacttactcacataaccaaataccacctattccccaaaaccctgttgaaata-aaaaaTAAATAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 196510 361 - 13750039 ------tataatggaatattactcagccacaaaaaggaacaaaataatggtattagcagcaacttggatggaattggagacttattctaagtgaacaaactcaggaatgggaaactaaacattgtatgttctcattcatatgtggaagctaagctatgagggtacaaagacataagaatgatagactggactttggggactcaggggtaagggtggaaatggcaaaagataaaagaatacacattgtgtatggtgtacactgctcgggtgatgggtgcaccaaaatctcagaaatcaccactaaaaaacttactcacataaccaaataccacctattccccaaaaccctgttgaaata-aa----aaaTAAA i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3593501 685 - 6883506 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=37092.000000 s hg38.chr21_KI270874v1_alt 75441 6 + 166743 taaata s panTro5.chr21 3699918 6 + 33445071 taaata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326826 6 + 46275980 taaata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265926 6 - 13858734 TAAATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448627 6 + 32716333 TAAATA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155403937 6 - 185818997 TAAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162228486 6 - 192294377 TAAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8709157 6 + 9440265 TAAATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8438609 6 + 21915920 TAAATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15013471 6 - 90373283 taaata i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2192851 6 + 4234846 TAAATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 196871 6 - 13750039 TAAATA i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3594186 6 - 6883506 TGAAAG i dasNov3.JH568778 I 685 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20745984 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=8281.000000 s hg38.chr21_KI270874v1_alt 75447 1 + 166743 a s panTro5.chr21 3699924 1 + 33445071 a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326832 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265932 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448633 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155403943 1 - 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162228492 1 - 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8709163 1 + 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8438615 1 + 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15013477 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2192857 1 + 4234846 A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 196877 1 - 13750039 A i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20745984 1 - 38779656 A i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3594192 1 - 6883506 A i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822160 2 + 39895921 I e mm10.chr16 78116694 9034 + 98207768 I a score=341383.000000 s hg38.chr21_KI270874v1_alt 75448 41 + 166743 aaaGGGAAAAATTAATATGACTTATAGCACACAACTGAAGT s panTro5.chr21 3699925 41 + 33445071 aaaGGGAAAAATTAATATGACTTATAGCACACAACTGAAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326833 41 + 46275980 aaaGGGAAAAATTAATATGACTTATAGCACACAACTGAAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265933 41 - 13858734 AAAGGGAAAAATTAATATGACTTATAGCACACAACTGAAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448634 41 + 32716333 AAAGGGAAAAATTAATATGACTTATAGTGCACAACTGAAGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155403944 41 - 185818997 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162228493 41 - 192294377 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8709164 41 + 9440265 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8438616 41 + 21915920 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15013478 41 - 90373283 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2192858 41 + 4234846 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 196878 41 - 13750039 AAAGGGAAAAATTAGTATGACTTATAGCACACAACTGAACT i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20745985 41 - 38779656 AAAGAGAAAAATTAATGTGGTTTATAGCACACAACTGAAAT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13822162 41 + 39895921 AGAGAGAAAATTTAATGCTGGTTATAGCATACAACTGAAGT i canFam3.chr31 I 2 I 2 s dasNov3.JH568778 3594193 41 - 6883506 AAAAAAAAACAACAATACAACTTACAGTACACAATTGAAGT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78116694 9034 + 98207768 I a score=2224806.000000 s hg38.chr21_KI270874v1_alt 75489 307 + 166743 --AAAAATATGAGTTTTATCCTTAAGCACAGAACAGTAATAGGAAATTTaggcctgtattgaatccatact-ggtgacttattttttccgtattattaaacaagctg-ttaaactctctgaaaatccattattattttcctctgtacaataaaaaaaaatt-acctctaccttgaagagttgtgaaaatttggaagaatgtata-caaatg-actagaggcactaccaggcacatagaatgcactcTTTAT--ATTTACTTC----CTTCCCTC--C-CTACTTCCCATTCTGTTACTAGTACACTATGAAGTTTTTAACCAA s panTro5.chr21 3699966 307 + 33445071 --AAAAATATGAGTTTTATCCTTAAGCACAGAACAGTAATAAGAAATTTaggcctgtattgaattcatact-ggtgacttatttgttctgtattattaaacaaggtg-ttaaactctctgaaaatccattattattttcctctgtacaataaaaaaaaatt-acctctaccttgaagagttgtgaaaatttggaagaatgtaca-caaatg-actagaggcactaccaggcacatagaatgcactcTCTAT--ATTTACTTC----TTTCCCTC--C-CTACTCCCAATTCTGTTACTAGTACACTATGAAGTTTTTAACCAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17326874 306 + 46275980 --AAAAATATGAGTTTTATCCTTAAGCACAGAACAGTAATAAGAAATTTaggcctgtattgaatccatact-ggtgacttatttgttctgtattattaaacaaggtg-ttaaactctctgaaaatccattattattttcctctgtacaat-aaaaaaaatt-acctctaccttgaagagttgtgaaaatttggaagaatgtata-caaatg-actagaggcactaccaggcacatagaatgcactcTCTAT--ATTTACTTC----TTTCCCTC--C-CTACTCCCAATTCTGTTACTAGTACACTATGAAGTTTTTAACCAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3265974 305 - 13858734 --AAAAATATGAGTTTTATCCTTAAGCACAGAACAGTAATAAGAAATTTaggcccgtattgaatccatact-ggtgacttatttgttccgtattattaaacaagctg-ttaaactctctgaaaatccattattattttcctctgtacaat--aaaaaaatt-acctctaccttgaagagttgtgaaaatttggaagaatgtata-caaatg-actagaggcactaccaggcacatagaatgcactcTTTAT--ATTTACTTC----CTTCCCTC--C-CTACTCCCCATTCTGTTACTAGTACACTATGAAGTTTTTAACCAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448675 306 + 32716333 --AAAAATATGAGTCTTATCCTTAAGCATAGCACAGTAATAAAAAATTTagacctatattgaatccatact-ggtgacttatttgttgtatgttattaaacacgctg-ttaaactccctgaaaatccattattattttcctctgtacaat-aaaaaaaatt-acctctaccttgaagagttgtgaaaatttggaagaatgtata-caaatg-actagaggcactaccaggcacatagaatgcactcTCTAT--ATTTACTTC----CTTCCTTC--C-ctactccccattctgctactagtacactacgaagtttttaacaag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155403985 304 - 185818997 --TAAAATATGAGTTTTATCCTTAAGCACAGCACAGTAATAAGAAATTTagacctgtattgaatccatact-ggtgacttatttgttatgtattattaaataaactg-ttaaactctctgaaagtccattattattttcctctgtacaat--aaaaaactt-tcctctatcttgaagagttgtgaaaatttggaagaatgtata-caaatg-actaga-acaccaccaggcacatagaatgctctcTCTAT--ATTTACTTC----CTTCCCTC--C-ctactccccattctgttattagtgtactatgaagtttttaacaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162228534 304 - 192294377 --TAAAATATGAGTTTTATCCTTAAGCACAGCACAGTAATAAGAAATTTagacctgtattgaatccatact-ggtgacttatttgttatgtattattaaataaactg-ttaaactctctgaaagtccattattattttcctctgtacaat--aaaaaactt-tcctctatcttgaagagttgtgaaaatttggaagaatgtata-caaatg-actaga-acaccaccaggcacatagaatgctctcTCTAT--ATTTCCTTC----CTTCCCTC--C-CTACTCCCCATTCTGTTATTAGTGTACTATGAAGTTTTTAACAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8709205 306 + 9440265 --TAAAATATGAGTTTTATCCTTAAGCACAGCACAGTAATAAGAAATTTagacctgtattgaatccatact-ggtgacttatttgttatgtattattaaataaactg-ttaaactctctgaaagtccattattattttcctctgtacaataaaaaaaactt-tcctctatcttgaagagttgtgaaaatttggaagaatgtata-caaatg-actaga-acaccaccaggcacatagaatgctctcTCTAT--ATTTACTTC----CTTCCCTC--C-ctactccccattctgttattagtgtactatgaagtttttaacaag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8438657 304 + 21915920 --TAAAATATGAGTTTTATCCTTAAGCACAGCACAGTAATAAGAAATTTagacctgtattgaatccgtact-ggtgacttatttgttatgtattattaaataagctg-ttaaactctctgaaaatccattatccttttcctctgtacaat--aaaaaaatt-tcctctaccttgaagagttgtgaaaatttggaagaatgtata-cgaatg-actaga-ataccaccaggcacatagaatgcactcTCTAT--ATTTACTTC----CTTCCCTC--C-ctactccccattctgttattagtgtactatgaagtttttaacaag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15013519 304 - 90373283 --TAACATATGAGTTTTATCCTTAAGCACAGCACAGTAATAGGAAATTTagacctgcattgaatccatact-ggtgacttgtttgttatgtattattaaataagctg-ttaaactctctgaaaatccattattcttttcctctgtacagt--aaaaaatat-tcctctaccttgaagagttgtgaaaatttggaagaatgtata-caaatg-actaga-ataccaccaggcacatagaatgcactcTCTAT--ATTTACTTC----CTTCCCTC--C-CTACTCCCCATTCTGTTATTAGTGTACTATGAAGTTTTTAACAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2192899 304 + 4234846 --TAAAATATGAGTTTTATCCTTAAGCACAGCACAGTAATAAGAAATTTagacctgtattgaatccgtact-ggtgacttatttgttatgtattattaaataagctg-ttaaactctctgaaaatccattatccttttcctctgtacaat--aaaaaaatt-tcctctaccttgaagagttgtgaaaatttggaagaatgtata-cgaatg-actaga-ataccaccaggcacatagaatgcactcTCTAT--ATTTACTTC----CTTCCCTC--C-ctactccccattctgttattagtgtactatgaagtttttaacaag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 196919 304 - 13750039 --TAAAATATGAGTTTTATCCTTAAGCACAGTGCAGTAGTAAGAAATTTagacctgtattgaatccatact-ggtgacttatttgttatgtattattaaataagctg-ttacactctctgaaaatccattattattttcctctgtacaat--aaaaaaatt-tcctctaccttgaagagttgtgaaaatttggaagaatgtata-caaatg-actaga-ataccaccaggcacatagaatgcactcTCTAT--ATTTACTTC----CTTCCCTC--C-CTACTCCCCATTCTGTTGTTAGTGTACAACGAAGTTTTTAACAAG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20746026 257 - 38779656 --AAAATTATGAGTTTTATCTTTAAGCACAGCAGAGTAATAAAAGATTTagactagtgttggatccctactgggtgaattatttgctgtatgttattaagtaagctg-ttaaactctctgaaaacccatta----gttcctctgcacaat--aggaaaattaacatctccctcacgaagctgtgaaaatttggaagaaagtac------------aga-aaacagctagg-acaTAGAATGTTCTCATTAT--ATCCATTTC----CTTC--------------CCAATTTTATTATGAG----------------------- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78125728 290 + 98207768 --AAAGATATGGGTTTTATCTTTAAGTACAATGGAGTAA---GAGGTTTAGG--TGTGGTTAACCCCTGCTGGGTGATATATTTGATTCATAATATTAAACAGCCTT-TCAAATTCTCTGGGAATCCATTGTCA----CATCACCACAAT--GAGAAAATT-------AACATGAAGATTTGTAGAAATTTGGAACAAGGTGCA-GAAAAGCATTAGG-ATGGCATCAAGTACGTAGACAGTTTTCTTggt--attca-tca----cttccttg--t-ctagtctcaatattgttataatggcactgtgagattgttaaacaA i mm10.chr16 I 9034 I 193 s canFam3.chr31 13822205 311 + 39895921 --AGAGACATGGGTTCTATTTTTAAGCACAGCAGCATAATAGAAGATTTagacctgtgttaaatccctgctgggtgacttatctgctgtatgttattaaacaagctg-ttaaactgtctgagaatctatta----tctccactgcacagt--gaaaaaattaacatctactttgaagagttgtgaaaattggggagaatgtatagaaaatg-cctagg-acaacaccaggtgcatagtatgcactccataTTGATTTATTTCTCCACTTCCCCCAGC-ccagtcccagtcctgttattagtagaccatgaggtcttaagtaaa i canFam3.chr31 I 2 C 0 s dasNov3.JH568778 3594234 291 - 6883506 TAAGAGGTATGGGTTCTATTCTTAagcactgaagagtactaagaaatttagacatgtgttgaatcactgctgaacaatttattcatgctatgttatcaaataagctacttaaactccctgagaatccatt----tcctcccctgtacaat--gggaaatta-acatcttctttgaatagtcacca-----tgaaaaAATGTATAGAAAATT-ACTAGA-ATGATGCCAGA----------ACTCTCTATAT--ATTGATTCC----TTTCCCTC--Ctccagtcacagttacattaaaaaggcactatgaagttttcaataag i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=2492324.000000 s hg38.chr21_KI270874v1_alt 75796 355 + 166743 -TCACTTTTGGGGTCTCAGTTTT-A-CC-TCTATAAACAAGCAAGGCCAAGCTATTTTGACAATTTATAGTCCCAATGTTATGACACATTGTTAGGTCATGAGTAAGTGGGCAATGTGTCACAAGTAGTCCAACCTAATATTAATAATAATTAAATTACCAAAATTTACAAATAAGTTTC-TTTTA-AAA-TGTACA--------------------ATTATAACATCAAAATAAGTCATTAGTACTTCCACTTGCTTTTGAGATGGAGCATATGAAGT--AGTTTCGGATGATAAAGATGGAATTGCTC-TAATGCATAGGCTACTTTGTCTCACATAATAGCATTGATGTACCCTTAATAGTTGGATGATTATA---------------------AGTTACAGC--- s panTro5.chr21 3700273 357 + 33445071 -TCATTTTTGGGGTCTCAGTTTT-A-AC-TCTATAAACAAGCAAGGCCAAGCTATTTTGACAATTTATAGTCCCAATGTTATGACACATTGTTAGGTGATGAGTAAGTGGGCAATGTGTCACAAATAGTCCAACCTAATATTAATAATAATTAAATTACCAAAATTTACAAATAAGTTTC-TTCTA-AAA-TGTACA--------------------ATTATAACATCAAAATAAGTTATCAGTACTGCCACTTGCTTTTGAGGTGGAGCATATGAAGTAGAGTTTCGGATGATAAAGATGGAATTGCTC-TAATGCATAGGCTACTTTGTCTCACATAATAGCATTGATGTACCCTTAATAGTTTGATGATTATA---------------------AGTTACAGC--- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17327180 357 + 46275980 -TCATTTTTGGGGTCTCAGTTTT-A-AC-TCTATAAACAAGCAAGGCCGAGCTATTTTGACAATTTATAGTCCcaatgttatgacacattgttaggtgatgagtaagtgggcaatgtgtcacaagtagtccaacctaatattaataataattaaattaccaaaatttacaaataagtttc-ttcta-aaa-tgtaca--------------------attataacatcaaaataagttatcagtactgccacttgcttttgaggtggagcatatgaagtagagtttcggatgataaagatggaattgctc-taatgcataggctactttgtctcacataatagcattgatgtacccttaatagtttgatgattata---------------------agttacagc--- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3266279 356 - 13858734 -TCACTTTTGGGGTCTCAGTTTT-A-CC-TCTATAAACAAGCAAGGCCAAGCTATTTTGACAATTTATAGTCCcaatgttatgacacattgttaggtcatgagtaagtgggcaatgtgtcacaagtagtccaacctaatattaataataattaaattaccaaaatttacaaataagttt--tttta-aaa-tgtaca--------------------attataacatcaaaataagtcattagtacttccacttgcttttgagatggagcatatgaagtagagtttcagatgataaagatggaattgctc-taatgcataggctactttgtctcacataatagcattgatgtacccttaatagtttgatgattata---------------------tgttacagc--- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4448981 353 + 32716333 -tcacttttggggtctcagtttt-a-cc-tctataaaCAAGCAAAGCCAAGCTATTTTGACAATTTATAGTCCCAATGTTATGACACATTGTTAGGTCATCAGTAAGTGGGCAATGTATCACAAGTAGTCCAACCTAATATTAATAATAATTAAATTACCAAAATTTACAAATAAGTTTA-TTTTA-AAA-TGTACA--------------------ATTATAACATCAAAATAAGTCATCAGTACTTCCACTTGCTTTTGAGGTGGAGCATATGAAGTAGAATTTCAGATGATAAAGATGGAATTGTTC-TAATGCATAGGCTACTTTGTCTCACATAATAGT-TTGATGTACCCTTAA---TTTGATGATTATA---------------------AGTTACAGC--- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155404289 356 - 185818997 -tcacttttggggtctcagtttt-a-cc-tctctaaaCAAGCAGAGCCAAGCCAGTTTGACAATTTATAGTCCcagtgttatgacacattgttaggtcatgagtaagtgggcaatgtatcacaagtactccaacctaatattaataatagttaaattaccaacatttacaaataagttt--cttta-aaa-tgtaca--------------------attataacgtcaaaataagtcatcagtacttccacttgcttttcaggtggagtatatgaagtagagtttcagatgacaaagatagaattgctc-taatgcatggactactttgtctcacataatagctttgaggtacccttaatagttggatgattata---------------------agttacaac--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162228838 356 - 192294377 -TCACTTTGGGGGTCTCAGTTTT-A-CC-TCTCTAAACAAGCAGAGCCAAGCCAGTTTGACAATTTATAGTCCcagtgttatgacacattgttaggtcatgagtaagtgggcaatgtatcacaagtactccaacctaatattaataatagttaaattaccaacatttacaaataagttt--ctttA-AAA-TGTACA--------------------ATTATAACGTCAAAATAAGTCATCAGTACTTCCACTTGCTTTTCAGGTGGAGTATATGAAGTAGAGTTTCAGATGACAAAGATAGAATTGCTC-TAATGCATGGACTACTTTGTCTCACATAATAGCTTTGAGGTACCCTTAATAGTTGGATGATTATA---------------------AGTTACAAC--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8709511 356 + 9440265 -tcacttttggggtctcagtttt-a-cc-tctctaaaCAAGCAGAGCCAAGCCAGTTTGACAATTTATAGTCCcagtgttatgacacattgttaggtcatgagtaagtgggcaatgtatcacaagtactccaacctaatattaataatagttaaattaccaacatttacaaataagttt--cttta-aaa-tgtaca--------------------attataacgtcaaaataagtcatcagtacttccacttgcttttcaggtggagtatatgaagtagagtttcagatgacaaagatagaattgctc-taatgcatggactactttgtctcacataatagctttgaggtacccttaatagttggatgattata---------------------agttacaac--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8438961 356 + 21915920 -tcacttttggggtctcagtttt-a-cc-tctgtaaaCAAGCAGAGCCAAGTTAGTTTGACAATTTATAGTCCcaatgttatgacacattgtcaggtcatgagtaagtgggcaatgtatcacaagtactctaacctaatattaataatagttaaattaccaaaatttataaataagttt--cttta-aaa-tgtaca--------------------attataacatcaaaataagtcatcagtacttccacttgcttttgaggtagagtatatgaagtagagtttcagatgacaaagatagaattgctc-taatgcatggactactttgtttcacataatagctttgaggtacccttaatagttggatgattata---------------------agttataac--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15013823 356 - 90373283 -TCACTTTTGGGGTCTCAGTTTT-A-CC-TCTATAAACAAGCAGAGCCAAGCTAGTTTGACAATTTATAGTCCcaatgttatgacacattgtcaggtcatgagtaagtgggcaatgtatcacaagtactgcaacctaatattaataatagttaaattaccaaaatttacaaataagttt--ctttA-AGA-TGTACA--------------------ATTATAACATCAAAATAAGTCATCAGTACTTCCACTTGCTTTTGAGGTGGAGTATATGAAGTAGAGTTTCAGATGACAAAGATAGAATTGCTC-TAATGCATGGACTACTTTGTCTCACATAATAGCTTTGAGGTACCCTTAATAGTTGGATGATTATA---------------------AGTTACAAC--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2193203 356 + 4234846 -tcacttttggggtctcagtttt-a-cc-tctataaaCAAGCAGAGCCAAGCTAGTTTGACAATTTATAGTCCcaatgttatgacacattgtcaggtcatgagtaagtgggcaatgcatcacaagtactccaacctaatattaataatagttaaattaccaaaatttataaataagttt--ctttA-AAA-TGTACA--------------------ATTATAACATCAAAATAAGTCATCAGTACTTCCACTTGCTTTTGAGGTAGAGTATATGAAGTAGAGTTTCAGATGACAAAGATAGAATTGCTC-TAATGCATGGACTACTTTGTTTCACATAATAGTTTTGAGGTACCCTTAATAGTTGGATGATTATA---------------------AGTTACAAC--- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 197223 356 - 13750039 -TCACTTTTGCAGTCTCAGTTTT-A-CC-TCTCTAAACAAGCAGAGCCAAGCTAGTTTGACAATTTATAGTCCcaatgttataacacattgttaggtcatgagtaagtgggcaatgtatcacaagtactccaacctaatatgaataatagttaaattaccaacatttacaaataagttt--attta-aaa-tgtaca--------------------agtataacatcaaaataagtcatcagtacttccacttgcttttgaggtggagtatatggagtagagtttcagatgacaaagatggaattgctc-taatgcatggactactttgtctcacataatagctttgatgtacccttaatagttggatgattata---------------------agttacaac--- i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20746283 351 - 38779656 -----------GGTTTCAGTTTT-A-CCTTCTGTAAACAGGCAAAGGTAAACTAGTTCAACAATTCATAAAACCAATGTCGTGACACATCGTCATGTGTTACGCAGGTAGGCAAGGTGTCATAAGTGGTCCAATC------GAAAGACAGTTAAATGACTGAGATTTACAACTAAGTTTC-TCTTACAAA-TGTGCA--------------------GTTAT---TCTAAAATTA-----------TCCCACTTGCTTTTGAGGTGGACTAAATGAAGTAGAGTTTCAGTCAACAAAGATGGAATTGATCAGAATACATAACCTGCTTTACTTCATATAGCAGCTTTGATGTAACCTTAATAATTGGGTGATTATggctcagcacccatagcatagtggttacagc--- i otoGar3.GL873528 C 0 I 267 s canFam3.chr31 13822516 361 + 39895921 -ttactctttaggtctcagttttaa-tc-tctgaaaaaagacagagctgaactagTGcaacaattagcaaccccaatttcatgacac--tgttataacaaaagcaactgggccatgtgtcacaagtagttcaacc------taataataattaaattaccaagattcacagataattttg-tttta-aaactgtatagctgttcca--gttatctccactataaaatcaagatcaggcactggtactt-cacttgctttAG-GGTGAAATAAATGAAGT--AGTTTCAAATAACAAAGATGAAGTTGCTCATCACACACAGTCTACTTT-----ATATAATAGCCTTTATTTACTCTTAAGAATTGGGTGATTATG---------------------AATTATTGT--- i canFam3.chr31 C 0 I 3 s dasNov3.JH568778 3594525 373 - 6883506 ttgcttttttgggtctcagtttt-atcc-tcggtaaacagacatagctgaactagTTTaacaattcttaaccccaatgtcatgacacactattatgttaggagcaactgggtaatgtattataagtagctcaaca------taataatag-taaagtaccaaaatttacagataattttcttttca-caa-tgctcagctgttccaagattatccccattataacttcagaattggtcactgacagtt-catgtgtttttgaagtagagtaaatgaggcagagtGTCAGATAATAAAGATGGA-TTGCTCATAACACACAGCCTACTTTATCTCATGTAATATACT--GTATACACTTAATAGTTTGGCAATTATA---------------------AATTAGTATAGT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=615887.000000 s hg38.chr21_KI270874v1_alt 76151 79 + 166743 TCTCATATATTATACTTTTCTTAACTGAATATTTCTTACTTATTTTATTTATGTATATGTTTCTAAAAGGAAAAAGATA s panTro5.chr21 3700630 79 + 33445071 TCTCATATATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATTTATGTATATGTTTCTAAAAGGAAAAAGATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17327537 79 + 46275980 tctcatatattatacttttcttaactgaatatttcttacttattttatttatgtatatgtttctaaaaggaaaaagata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3266635 79 - 13858734 tctcatatattatacttttcttaactgaacattttttacttattttatttatgtatatgtttctaaaaggaaaaagata i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449334 79 + 32716333 TCTCATATATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATTTATGTATATGTTTCTAAAAGGAAAAAGATA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155404645 79 - 185818997 tgtcatagattatacttttcttaactgaacatttcttacttattttatttatgcatatgtttctaaaaggaaaaagata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229194 79 - 192294377 TGTCATAGATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATTTATGCATATGTTTCTAAAAGGAAAAAGATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8709867 79 + 9440265 tgtcatagattatacttttcttaactgaacatttcttacttattttatttatgcatatgtttctaaaaggaaaaagata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439317 79 + 21915920 tgtcatatattatacttttcttaactgaacatttcttacttattttatttatgcatatgtttctaaaaggaaaaagata i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014179 79 - 90373283 TGtcatatattatacttttcttaactgaacatttcttacttattttatttatgcatatgtttctAAAAGGAAAAAGATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2193559 79 + 4234846 TGTCATATATTATACTTTTCTTAACTGAACATTTCTTACTTATTTTATTTATGCATATGTTTCTAAAAGGAAAAAGATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 197579 79 - 13750039 tgtcatatattatacttttcttaattgaacatttcttacttattttatttatgcatatgtttttaaaaggaaaaagaca i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20746901 77 - 38779656 TCTCACAAATTATACTTTTCTTAAC--AACATTTCTTAGTAATTTTATCTACGTATATCTTTCTAAAAGGAAAAATACA i otoGar3.GL873528 I 267 C 0 s canFam3.chr31 13822880 77 + 39895921 TCTCATAAATTATATTTTTC-TAACTGAAAATTTCTTAGTGACCTTATCTATGTACATATTTTT-AAAGGAAAAAGATA i canFam3.chr31 I 3 I 231 s dasNov3.JH568778 3594898 76 - 6883506 TCTCATCAATTTCACTTTTCTTTACTATAAATTTCTTAGTAACATTAGCTATACAGATGGTTCTAAAAGG---AAGATA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=16398.000000 s hg38.chr21_KI270874v1_alt 76230 15 + 166743 ---------AC-------------------ACCAA--------TTTTTTTT s panTro5.chr21 3700709 16 + 33445071 ---------AC-------------------ACCAA-------CTTTTTTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17327616 16 + 46275980 ---------aC-------------------ACCAA-------CTTTTTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3266714 16 - 13858734 ---------aC-------------------ACCAA-------TTTTTTTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449413 16 + 32716333 ---------AC-------------------ACTAA-------TTTTTTTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155404724 23 - 185818997 ---------aC-------------------ATTAATTGTTTTTTTTTTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229273 22 - 192294377 ---------AC-------------------ATTAATTG-TTTTTTTTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8709946 23 + 9440265 ---------aC-------------------ATTAATTGTTTTTTTTTTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439396 21 + 21915920 ---------aC-------------------ATTAATTG--TTTTTTTTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014258 17 - 90373283 ---------AC-------------------ATTAA------TTTTTTTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2193638 18 + 4234846 ---------AC-------------------ATTAA-----TTTTTTTTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 197658 23 - 13750039 ---------aC-------------------ATTAATTTTTTTGTTTGTTTT i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20746978 26 - 38779656 ---------GCTAATTGGAGTAAAATGAAAAAAAA---------------- i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3594974 17 - 6883506 AAACTAGATAA-------------------GTTAAC--------------- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13822957 231 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=1089363.000000 s hg38.chr21_KI270874v1_alt 76245 154 + 166743 AAGTCTGTAGTT-CTATACAC-----TTT-----ACTTC--CCTGCAAAACCCTTTGTCATTTCTCAAATCAGAGTGTGCTGATGAGAGTG-TCTG-----AAGCA-AACCATGATCATCCTTAGCGCTTGTCTCAGTGAAGACAA---TGTTGGAAACCACTGAATT---TCATCACTA s panTro5.chr21 3700725 154 + 33445071 aagtctgtagtt-ctatacac-----ttt-----acttc--cctgcaaaaccctttggcatttctcaaatcagagtgtgctgatgagagtg-tctg-----aagca-aaccatgatcatccttagtgcttgtctcagtgaagacag---tgttggaaaccactgAATT---TCATCTCTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17327632 154 + 46275980 aagtctgtagtt-ctatacac-----ttc-----acttc--cctgcaaaaccctttggcatttctcaaatcagagtgtgctgatgagagtg-tctg-----aagca-aaccatgatcatccttagtgcttgtctcagtgaagacag---tgttggaaaccactgAATT---TCATCTCTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3266730 154 - 13858734 aagtctgtagtt-ctatacac-----ttt-----acttc--cctgcaaaaccctttggcatttctcaaatcagagtatgctgatgagagtg-tctg-----aagca-aaccatgaccatccttagtgcttgtctcagtgaagacaa---tgttggaaaccactgAATT---TCATCTCTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449429 154 + 32716333 AAGTCTGTAGTT-CTATATAC-----TTT-----ACTTC--CCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTGTGCTGATGAGAGTG-TCTG-----AAGCA-AACCATGATCATCCTTAGTGTTTGTCTCAGTGAAGACAA---TGTTGGAAACCACTGAATT---TCATCTCTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155404747 154 - 185818997 aagtctgtagtt-ctctacac-----tgt-----acttc--cctgcaaaacactttggcatttctcaaatcagagtacgctgatgagaatg-tctg-----aagta-aaccatgatcatccttggtgcttgtctcagtgaagacaa---tgttggaaaccactgAATT---TCACCTCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229295 154 - 192294377 AAGTCTGTAGTT-CTCTACAC-----TGT-----ACTTC--CCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTACGCTGATGAGAATG-TCTG-----AAGTA-AACCATGATCATCCTTGGTGCTTGTCTCAGTGAAGACAA---TGTTGGAAACCACTGAATT---TCACCTCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8709969 154 + 9440265 aagtctgtagtt-ctctacac-----tgt-----acttc--cctgcaaaaccctttggcatttctcaaatcagagtacgctgatgagaatg-tctg-----aagta-aaccatgatcatccttggtgcttgtctcagtgaagacaa---tgttggaaaccactgAATT---TCACCTCTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439417 154 + 21915920 aagtctgtagtt-ctatacac-----ttt-----acttc--cctgcaaaaccctttggcatttctcaaatcagagtatgctgatgagaatg-tctg-----aagta-aaccatgatcatccttggtgcttgtctcagtgaagacaa---tgttggaaaccactgAATT---TCACCTCTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014275 155 - 90373283 AAGTCTGTAGTTACTCTACAC-----TGT-----ACTTC--CCTGCAAAACCCTTTGGCATTTCTCAAATCAGAGTATGCTGATGAGAATG-TCTG-----AAGTA-AACCATGATCATCCTTGGTGCTTGTCTCAGTGAAGACAA---TGTTGGAAACCACTGAATT---TCACCTCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2193656 154 + 4234846 aagtctgtagtt-ctatacac-----ttt-----acttc--cctgcaaaaccctttggcatttctcaaatcagagtatgctgatgagaatg-tctg-----aagta-aaccatgatcatccttggtgcttgcctcagtgaagacaa---tgttggaaaccactgAATT---TCACCTCTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 197681 154 - 13750039 aagtctgtagtt-ctatacac-----ttt-----acttc--cctgcaaaaccctttggcatttctcaaatcagagtatgctgatgagagtg-tctg-----aagta-aaccatgatcatccttggtgcttgtctcagtgaagacaa---cgttgcaaaccactgAATT---TCACCTCTA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20747004 171 - 38779656 AAGTCTGTAGAA-CTACATGCAAAAGTTTATAGAACTTC--CTTGTGAAACTCCTTGAAGTTTCGCAAAACAGAGTACACTGATGAGACTC-TTTG-----AAATATGACCATGACCATTTTCAATGTTTGTCCCAATGAAGAAAATGTTGTTGGCAACCACTGAATTATGTCACCTCTG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13823188 154 + 39895921 AAGTCTGTAGCT-CTATAGGC-----TTT-----ACTTG--C-TATGAAACTCTCCAGCATTTCTCAAATCAGAGTATATTGATGACAGTGTTCTG-----AATAC-AAACATAATCATCCTTGATGTTTGTTCCAATGGAGAAAA---TGTTGGGGATCGCTGGATT---ACATCATCA i canFam3.chr31 I 231 I 5 s dasNov3.JH568778 3594991 102 - 6883506 AAGTCTGTGATT-CTATATGC-----CTT-----ATTTAAGCCTGCAAAACTC--TGTCATTTCTCAAATCAGAGTATGCTGTTGAGAGTG-TTCAGCAGTATGTA-CAGCATTATC--------------------------------------------------------------- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=54635.000000 s hg38.chr21_KI270874v1_alt 76399 12 + 166743 AGGA---TTTTTTCT s panTro5.chr21 3700879 13 + 33445071 AGGA--TTTTTTTCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17327786 13 + 46275980 AGGA--TTTTTTTCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3266884 13 - 13858734 AGGA--TTTTTTTCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449583 13 + 32716333 AGGA--TTTTTTTCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155404901 13 - 185818997 AGGA--TTTTTTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229449 14 - 192294377 AGGA-TTTTTTTTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710123 14 + 9440265 AGGA-TTTTTTTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439571 14 + 21915920 AGGA-TTTTTTTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014430 14 - 90373283 AGGA-TTTTTTTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2193810 14 + 4234846 AGGA-TTTTTCTTCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 197835 15 - 13750039 ATGATTTTTTTTTCT i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20747175 12 - 38779656 AAGA-ACTTTTCT-- i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3595093 0 - 6883506 C e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=982027.000000 s hg38.chr21_KI270874v1_alt 76411 192 + 166743 TTTAGTGTTGGTATCGTTTGATGTCTTTCTATTTATTTTTAttttttattttagatatagggagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacctataatccaaatattgaacatcattatacctaataggtaattttcaaccctcactcctccctac s panTro5.chr21 3700892 188 + 33445071 TTTAGTGTTGGTATCATTTGATGTCTTTCTATTTATTTTTAttttttattttagatatagggagtgcacagtc----ttgttacatgtattacatgtgtaatggtggggattgggtttctagtctatccataatccaaatattgaacatcattatacctaataggtaattttcaaccctcactcctccctac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17327799 191 + 46275980 TTTAGTGTTGGTATCATTTGATGTCTTTCTATTTAttttta-tttttattttagatatagggagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctatccataatccaaatattgaacatcattatacctaataggtaattttcaaccctcactcctccctac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3266897 191 - 13858734 TTTAGTGTTGGTATCGTTTGATGTCTTTCTAtttattttta-tttttattttagatatagggagtgcacagtcttgtttgttacatgtattacgtgtgtaatggtggggattgggtttctagtctacccataatccaaatattgaacatcattatacctaataggtaattttcaaccctcactcctccctac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449596 190 + 32716333 TTTAGCGTTGGTATAATTTGATGTCTTTCTAtttattttta-tttttattttagatacaaggagtgcacaatcttgtttgttacgtgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatattgaacatcattatacctaataggtaattttcaaccctcagtcc-ccccac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155404914 184 - 185818997 TTTAGTGTTGGTATCATTTGATGTCTTTCTAttta-------tttttattttagatttagcaagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatagtgaacatcattttgcctaataggtaattttcaaccctcactct-ccccac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229463 184 - 192294377 TTTAGTGTTGGTATCATTTGATGTCTTTCTAttta-------tttttattttagatttagcaagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatagtgaacatcattttgcctaataggtaatgttcaaccctcactct-ccccac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710137 184 + 9440265 TTTAGTGTTGGTATCATTTGATGTCTTTCTAttta-------tttttattttagatttagcaagtgcacagtctcgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatagtgaacatcattttgcctaataggtaattttcaaccctcactct-ccccac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439585 184 + 21915920 TTTAGTGTTGGTATCATTTGATGTCTTTCTAttta-------tttttattttagatttagcaagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatagtgaacatcattatgcctaataggtaattttcaaccctcactct-ccccac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014444 184 - 90373283 TTTAGTGTTGGTATCATTTGATGTCTTTCTAttta-------tttttattttagatttagcaagtgcacagtcttgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaatagtgaacatcattatgcctaataggtaattttcaaccctcactct-ccccac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2193824 184 + 4234846 TTTAGTGTTGGTATCATTTGATGTCTTTCTAttta-------tttttattttagatttagcaagtgcacagtcttgtttgttacatgtattacatgtgtaatggtgggaattgggtttctagtctacccataatccaaatagtgaacatcattatgcctaataggtaattttcaaccctcactct-ccccac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 197850 184 - 13750039 TTTAGTGTTGGTATCATTTGATGTCTTTCTAttta-------tttttattttagatttagcaagtgcacagtcctgtttgttacatgtattacatgtgtaatggtggggattgggtttctagtctacccataatccaaacagtgaacatcattatacctaataggtaattttcaacgctcactct-ccccac i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3595093 54 - 6883506 ----------------CTTGATG-------------------TTTTTCCTGGAAA--------------------------------------------AATGCTGGGGA---------------------------------ACACTTGATTAT-------------------ATCCTCTCTGC------- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20747187 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=709217.000000 s hg38.chr21_KI270874v1_alt 76603 127 + 166743 cttccccgctttcagagttttcagtgtctattatctccacctttacatttatgtgtactcactgtttagctcccacttgtaagtgagaacatgtgatatttgatcttgtgcttctaagttagtctca s panTro5.chr21 3701080 127 + 33445071 cctcccccctttcagagttttcagtgtctattatctccatctttacatttatgtgtactcactgtttagctcccatttgtaagtgagaacatgtgatatttgatcttgtgcttctaagttagtctca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17327990 127 + 46275980 cctcccccctttcagagttttcagtgtctattatctccatctttacatttatgtgtactcactgtttagctcccatttgtaagtgagaacatgtgatgtttgatcttgtgcttctaagttagtctca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267088 127 - 13858734 cctccccgctttcagagttttcagtgtctattatctccatctttacatttatgtgtactcactgtttagctcccacttgtcagtgagaacatgtgacatttgatcttgtgcttctaagttagtctca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449786 127 + 32716333 cctcccccctttcagagttttcagtgtctattatctccatctttacatttatgtgtactcactgtttagctcccacttgtgagtgagaatatgtgatatttggtcttctgcttctaagttagtctca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405098 127 - 185818997 cctccccccttccagagttttccgtggctattatctccatctttacattcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229647 127 - 192294377 cctccccccttccagagttttccgtggctattatctccatctttacattcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710321 127 + 9440265 cctccccccttccagagttttccgtggctattatctccatctttacattcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439769 127 + 21915920 cctccccccttccagagttttccgtggctgttatctccatcttcacattcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014628 127 - 90373283 cctcccccgttccagagttttcagtggctattatctccatctttacaatcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194008 127 + 4234846 cctccccccttccagagttttccgtggctattatctccatcttcacattcatgtgtactcattgtttagctcccacttgtaagtgaaaacatgtggtatttgatcttctgcttctaagttagtctca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198034 125 - 13750039 cctcccccctttcagagttttcagtggctattatctccatctttacattcatgtgaactcattgtttagctcccacttgtaagtgaaaac--gtgatatttgatcttcttcttctaagttagtctca i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e dasNov3.JH568778 3595147 0 - 6883506 C e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20747187 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=70416.000000 s hg38.chr21_KI270874v1_alt 76730 11 + 166743 ggatCTTTTTA s panTro5.chr21 3701207 11 + 33445071 ggatCTTTTTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328117 11 + 46275980 ggatCTTTTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267215 11 - 13858734 ggatCTTTTTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449913 11 + 32716333 ggatCTTTTTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405225 11 - 185818997 ggatCTTTTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229774 11 - 192294377 ggatCTTTTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710448 11 + 9440265 ggatCTTTTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439896 11 + 21915920 ggatCTTTTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014755 11 - 90373283 ggatCTTTTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194135 11 + 4234846 ggatCTTTTTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198159 11 - 13750039 ggatCTTTTTA i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3595147 11 - 6883506 AGATGCTATCA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e otoGar3.GL873528 20747187 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=244892.000000 s hg38.chr21_KI270874v1_alt 76741 42 + 166743 TCTGCAAACC------ATCTATGTTATCCCCCAACAAGTCTAGACATG s panTro5.chr21 3701218 42 + 33445071 TCTGCAAACC------ATCTATGTTATCCCCCAACAAGTCTAGACATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328128 42 + 46275980 TCTGCAAACC------ATCTATGTTATCCCCCAACAAGTCTAGACATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267226 42 - 13858734 TCTGCGAACC------ATCTATGTTATCCCCCAACAAGTCTAGACATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449924 42 + 32716333 TCTGCAAACC------ATCTATGTTATCCCCCAACAAGTCTAGACATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405236 42 - 185818997 ACTGCAAACC------ATCTATGTTATCCCCCAACAAGTTTAGACAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229785 42 - 192294377 ACTGCAAACC------ATCTATGTTATCCCCCAACAAGTTTAGACAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710459 42 + 9440265 ACTGCAAACC------ATCTATGTTATCCCCCAACAAGTTTAGACAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439907 42 + 21915920 ACTGCAAACC------ATCTATGTTATCCCCCAACAAGTTTAGACAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014766 42 - 90373283 ACTGCAAACC------ATCTATGTTATCCCCCAACAAGTTTAGACAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194146 42 + 4234846 ACTGCAAACC------ATCTATGTTATCCCCCAACAAGTTTAGACAAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198170 42 - 13750039 ACTGCAAACC------ATCTATGTTATCCCCCAACAAGTTTAGACATG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20747187 31 - 38779656 TCTTCAAACC------TTCTTTATTGTCCC-----------AAAAATG i otoGar3.GL873528 C 0 I 5 s dasNov3.JH568778 3595158 28 - 6883506 ACTGCAAGCCTTTGTGTTCAATATTGTC-------------------- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e micMur3.chr31 19191085 1020 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=34886.000000 s hg38.chr21_KI270874v1_alt 76783 5 + 166743 CAAAC s panTro5.chr21 3701260 5 + 33445071 CAAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328170 5 + 46275980 CAAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267268 5 - 13858734 CAAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449966 5 + 32716333 CAAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405278 5 - 185818997 CAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229827 5 - 192294377 CAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710501 5 + 9440265 CAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439949 5 + 21915920 CAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014808 5 - 90373283 CAAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194188 5 + 4234846 CAAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198212 5 - 13750039 CAAAC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19192105 5 + 47401472 CAAAT i micMur3.chr31 I 1020 C 0 s otoGar3.GL873528 20747223 4 - 38779656 CAAT- i otoGar3.GL873528 I 5 I 2 s dasNov3.JH568778 3595186 5 - 6883506 CAAAA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1090817 808 + 2694913 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=1048156.000000 s hg38.chr21_KI270874v1_alt 76788 118 + 166743 ATGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTAAGAAATTCTTGGGAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTA-TTATAGGAG s panTro5.chr21 3701265 118 + 33445071 ATGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTAAGAAATTCTTGGGAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTA-TTATAGGAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328175 118 + 46275980 ATGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTAAGAAATTCTTGGGAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTA-TTATATGAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267273 117 - 13858734 ATGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTAAGAAATTCTTGGGAAAACTTTGTAATAA---CTG-AAACATTTCAAAGTATTATGCCATAGTTTTGGTGTA-TTATAGGAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4449971 118 + 32716333 ATGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACTCTTTAAGAAATTTCTGGGAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTA-TTATAGGAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405283 118 - 185818997 ACGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGCAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTA-TTATAGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229832 118 - 192294377 ACGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGCAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTA-TTATAGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710506 118 + 9440265 ACGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGCAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTA-TTATAGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8439954 118 + 21915920 ACGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGGAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTA-TTATAGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014813 118 - 90373283 ACGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGGAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTA-TTATAGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194193 118 + 4234846 ACGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAATTCTTGGGAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTACTATGCCATAATTTTGGTGTA-TTATAGGAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198217 118 - 13750039 ACGT-TTGCAAGTAAATGCTCTTTGATAAAAGAAACCCTTTCAGAAGTTCTTGGGAAAACTTTGTAATAA---CTGTAAACATTTCAAAGTATTATGCCATAATTTTGGTGTA-TTATAGGAG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19192110 117 + 47401472 ATGT-TTGCAAGGAAATACCCTCTAGCAAAAGAAACCCTTTCTGAAACTCTTGGGAAAACTTAATAA-AA---TCGTAAACATCACAAAGTATTATAGCATAATTTGGCTGTA-TTACAGGAG i micMur3.chr31 C 0 I 20 s proCoq1.NW_012144079v1 1091625 118 + 2694913 ATGT-TTGCAAGGAAATACTCTCTGGCAAAAGAAACCCTTTCTGAAACTCTTGGGAAACCTTCATAATAA---TTGTAAACATTACAAAGTATTATAGCATAATTTGGGTATA-TTATAGGAG i proCoq1.NW_012144079v1 I 808 I 20 s otoGar3.GL873528 20747229 113 - 38779656 ATTTATTGTAAGTAAATACTCTTTGGC-------ACCCCTTCAAAAACTCTTGGGGAAGCTTCATAATAA---TTGTAAACATTACAAAGTATGATAGCATAATTTGGGTATATTTATAGAAG i otoGar3.GL873528 I 2 C 0 s dasNov3.JH568778 3595191 121 - 6883506 CTTT-TTGCAAGAAAATACATTTTAGCAAAAAAAACCTTTTCAGGAGTTCCTAGGAAGATTTTATAATAATGTTTATAAACATTACAAAGTATTACAGCATAACTTGGTTATG-TTATAAGAG i dasNov3.JH568778 C 0 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=94647.000000 s hg38.chr21_KI270874v1_alt 76906 16 + 166743 CAATAGAAAAAAAAGG s panTro5.chr21 3701383 16 + 33445071 CAATAGAAAAAAAAGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328293 16 + 46275980 CAATAGAAAAAAAAGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267390 16 - 13858734 CAATAGAAAAAAAAGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450089 16 + 32716333 CAATAGAAAAAAAAGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405401 16 - 185818997 CAATTGAAAATAAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229950 16 - 192294377 CAATTGAAAATAAAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710624 16 + 9440265 CAATTGAAAATAAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8440072 16 + 21915920 CAATTGAAAATAAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014931 16 - 90373283 CAATTGAAAATAAAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194311 16 + 4234846 CAATTGAAAATAAAGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198335 16 - 13750039 CAATTGAAAATAAAGG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20747342 16 - 38779656 AGATTGAACACAATGA i otoGar3.GL873528 C 0 I 4 s dasNov3.JH568778 3595312 16 - 6883506 AAATTAAATAAAATGG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091743 20 + 2694913 I e micMur3.chr31 19192227 20 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=320949.000000 s hg38.chr21_KI270874v1_alt 76922 35 + 166743 A----------TTCTTTAGTTAAAATGGCAAAACCCACTTTAGAA s panTro5.chr21 3701399 35 + 33445071 A----------TTCTTTAGTTAAAATGGCAAAACCCGCTTTAGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328309 35 + 46275980 A----------TTCTTTAGTTAAAATGGCAAAACCCGCTTTAGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267406 35 - 13858734 A----------TTCTTTAGTTAAAATGGCAAAATCCACTTTAGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450105 35 + 32716333 A----------TTCTTTAGTTAAAATGGCAAAACCCACTTTAGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405417 35 - 185818997 A----------TTCTTTAGTTCAAATGGCAAAACCCACTTTAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162229966 35 - 192294377 A----------TTCTTTAGTTCAAATGGCAAAACCCACTTTAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710640 35 + 9440265 A----------TTCTTTAGTTCAAATGGCAAAACCCACTTTAGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8440088 35 + 21915920 A----------TTCTTTAGTTCAAATGGCAAAACCCACTTTAGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014947 35 - 90373283 A----------TTCTTTAGTTCAAATGGCAAAACCCACTTTAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194327 35 + 4234846 A----------TTCTTTAGTTCAAATGGCAAAACCCACTTTAGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198351 44 - 13750039 ATTCTTTAT-TTTCTTTAGTTCAAATGACAAAACCCACTTTAGAA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19192247 35 + 47401472 A----------TTCTCTAGTTCAAATGGCAAAACCCACTTTAGAA i micMur3.chr31 I 20 I 5962 s proCoq1.NW_012144079v1 1091763 35 + 2694913 A----------TTCTCTAGTTCAAATGGCAAAACCGACTTTAGAA i proCoq1.NW_012144079v1 I 20 I 1 s otoGar3.GL873528 20747362 35 - 38779656 A----------TTCTTTAGTTTAAATGGTAAAATCCACTTTAAAA i otoGar3.GL873528 I 4 C 0 s dasNov3.JH568778 3595328 39 - 6883506 ------AATATTTACGTAATTCAAGTGACAGAACCCACTTTAGAA i dasNov3.JH568778 C 0 C 0 e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=150066.000000 s hg38.chr21_KI270874v1_alt 76957 19 + 166743 -AGAACATGTCTAAAACATG s panTro5.chr21 3701434 19 + 33445071 -AGAACATGTCTAAAACATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328344 19 + 46275980 -AGAACATGTCTAAAACATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267441 19 - 13858734 -AGAACATGTCTAAACCATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450140 19 + 32716333 -AGAACATGTCTAAAACATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405452 19 - 185818997 -AGAACATGTCTAAAACATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162230001 19 - 192294377 -AGAACATGTCTAAAACATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710675 19 + 9440265 -AGAACATGTCTAAAACATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8440123 19 + 21915920 -AGAACATGTCTAAAACATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15014982 19 - 90373283 -AGAACATGTCTAAAACATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194362 19 + 4234846 -AGAACATGTCTAAAACATG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198395 19 - 13750039 -AGAACATGTCTAAAACATG i colAng1.NW_012120598v1 C 0 C 0 s proCoq1.NW_012144079v1 1091799 19 + 2694913 -AGGACATATCTAAAGCATG i proCoq1.NW_012144079v1 I 1 I 15465 s dasNov3.JH568778 3595367 20 - 6883506 AAGAACCTGTTTAAAACATG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=562702.000000 s hg38.chr21_KI270874v1_alt 76976 91 + 166743 -----------------------------------ATGTAAC--TCAGAAAAAGAATTATTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTAGATTGTACAGTACCTCTGATTATCTG s panTro5.chr21 3701453 91 + 33445071 -----------------------------------ATGTAAC--TCAGAAAAAGAATAACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTGTACAGTACCTCTGATTATCTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328363 91 + 46275980 -----------------------------------ATGTAAC--TCAGAAAAAGAATTATTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTGTACAGTACCTCTGATTATCTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267460 91 - 13858734 -----------------------------------ATGTAAC--TCAGAAAAAGAATTATTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTGTACCGTACCTCTGATTATCTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450159 91 + 32716333 -----------------------------------ATGTAAC--TCAGAGAAAGAATTATTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTGTACAGTACCTCTGATTATCTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405471 91 - 185818997 -----------------------------------ATGTAAC--TCAGAGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162230020 91 - 192294377 -----------------------------------ATGTAAC--TCAGGGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710694 91 + 9440265 -----------------------------------ATGTAAC--TCAGAGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8440142 91 + 21915920 -----------------------------------ATGTAAC--TCAGAGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15015001 91 - 90373283 -----------------------------------ATGTAAC--TCAGAGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194381 91 + 4234846 -----------------------------------ATGTAAC--TCAGAGAAAGAATTACTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTACAGTACCTCTGATTATCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198414 91 - 13750039 -----------------------------------ATGTAAC--TCAGAGAAAGAATTATTGGATCTTAAACAAAGAAAAGGATTATCAAAGCATTTGACTTGATTTTATAGTACCTCTGATTATCTG i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3595387 125 - 6883506 ATGTATCAATAAGAATGAAAAAAAAAGAAACCATGATGTAACTATCTGAAGCAGAATCTGTGGTTAATAAATAAGGATAAGA--TGCCAAGGCATTTGACATGATT-TGCAGTACCCCTGATTAACTC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13823342 5 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=913558.000000 s hg38.chr21_KI270874v1_alt 77067 130 + 166743 CCGATTCACAACCCTTTAATATCTTATATTTATTCCAATATGGAAAATATAGTGCACCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACCTATTTAAAATATCAACTCAAAAATA--TTA--TAGCAC s panTro5.chr21 3701544 130 + 33445071 CCAATTCACAACCCTTTAATACCTTATATTTATTCTAATATGGAAAATATAGTGCACCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACGTATTTAAAATATCAACTCAAAAATA--TTA--TAGCAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328454 130 + 46275980 CCAATTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTGCACCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACATATTTAAAATATCAACTCAAAAATA--TTA--TAGCAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267551 130 - 13858734 CCGATTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTGCACCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACCTATTTAAAACATCAACTCAAAAATA--TTA--TAGTAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450250 130 + 32716333 CCCATTCACAACCCTTTAATATCTTATATTTATTCTAACATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTAAAATTCCATGCTCAACCTATTTAAAATATCAACTCAAAAATA--TTA--TAGTAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405562 130 - 185818997 CCTGTTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTACAACTGGTAAAATCAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATA--TTA--TAGTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162230111 130 - 192294377 CCTGTTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATA--TTA--TAGTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710785 130 + 9440265 CCTGTTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATA--TTA--TAGTAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8440233 130 + 21915920 CCTGTTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATA--TTA--TAGTAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15015092 130 - 90373283 CCTGTTCACGACCCTTTCATATCTTATATTTATTCTAATATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATA--TTA--TAGTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194472 130 + 4234846 CCTGTTCACAACCCTTTAATATCTTATATTTATTCTAATATGGAAAATATAGTACACCTGGTAAAATTAGGCAATATTTAAATTCCGTGCTCAACCTATTTAAAATATCAACTCAAAAATA--TTA--TAGTAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198505 130 - 13750039 CCCGTTCACAACCATTTAATACCTTATATTTAGTCTAATATGGAAAATATAATACACCTGGTAAAATTAGGCAATATTTAAATTCCATGCTCAACCTATTTAAAATATCAACTCGAAAATA--TTA--TAGTAT i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13823347 125 + 39895921 CCCATTCACAACTCTTTAATATCATAGATTTCTTCCAATATGGAAAGTATAGCACTCCTGGTAAAATAAGTC----TTTTAATTCCATTCTTAACTTACTTGACATGTCAACTCAAAAATA---CA--TAGTAT i canFam3.chr31 I 5 I 1632 s dasNov3.JH568778 3595512 133 - 6883506 CCCTTTCACTACTTTTTAATATCTTGTATTTCTTCTAATAAGGAAAGTACAGTACCCTTGGT-GAATAAAGCAATATTTAAATTTCATGTTCCACCTACTCAAAATGTCAACTCAAAAATAAATTAATTAATAA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=309090.000000 s hg38.chr21_KI270874v1_alt 77197 49 + 166743 --ATATCTTGG-------AAGGCAAAATATGACTA-------TTTTATCTTTTGGGAATATACAC s panTro5.chr21 3701674 49 + 33445071 --ATATCTTGG-------AAGGCAAAATATGAGTA-------TTTTATCTTTTGGGAATATACAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328584 49 + 46275980 --ATATCTTGG-------AAGGCAAAATATGAGTA-------TTTTATCTTTTGGGAATATACAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267681 49 - 13858734 --ATATCTTGG-------AAGGCAAAATATGAGTA-------TTTTATCTTTTGGGGGTATACAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450380 48 + 32716333 --CTCTCTTGG-------AAGGCAAAATATGAGT--------TTTTTTTTTTTGGGAATATACAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405692 50 - 185818997 --ATATCTTGG-------AAGGCAAAATATGAGTA------TTTTTTTCTTTTGGGAATATACAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162230241 50 - 192294377 --ATATCTTGG-------AAGGCAAAATATGAGTA------TTTTTTTCTTTTGGGAATATACAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710915 50 + 9440265 --ATATCTTGG-------AAGGCAAAATATGAGTA------TTTTTTTCTTTTGGGAATATACAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8440363 50 + 21915920 --ATATCTTGG-------AAGGCAAAATATGAGTA------TTTTTTTCTTTTGGGAATATACAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15015222 51 - 90373283 --ATATCTTGG-------AAGGCAAAATATGAGTG-----TTTTTTTTCTTTTGGGAATATACAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194602 50 + 4234846 --ATATCTTGG-------AAGGCAAAATATGAGTA------TTTTTTTCTTTTGGGAATATACAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198635 49 - 13750039 --ATATCTTGG-------AAGGCAAAATATGAGCA-------TTTTTTCTTTTGGGAATATACAC i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13825104 48 + 39895921 --ATACCTTGG-------GA-GCAAAATATGAATA-------CTTTATCTTTTTGGAACATACAC i canFam3.chr31 I 1632 C 0 s dasNov3.JH568778 3595645 65 - 6883506 GTATGTGTGTGACTCTTCAGAGCAAAAGATGAGTGTTTTATCCTTTATCCTTTTGGAATATACAC i dasNov3.JH568778 C 0 I 1187 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=159476.000000 s hg38.chr21_KI270874v1_alt 77246 30 + 166743 TGTATCAGCTGCCTAGGTTTGCAAAACAAA s panTro5.chr21 3701723 30 + 33445071 TGTGTCAGCTGCCTAGGTTTGCAAAACAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328633 30 + 46275980 TGTGTCAGCTGCCTAGGTTTGCAAAACAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267730 30 - 13858734 TGTCTCAGCTGCCTAGGTTTGCAAAACAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450428 14 + 32716333 TGTAT----------------CAAAACAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405742 30 - 185818997 TGTATCAGTTCCCTAGGGTTGCAAAACAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162230291 30 - 192294377 TGTATCAGTTCCCTAGGGTTGCAAAACAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8710965 30 + 9440265 TGTATCATTTCCCTAGGGTTGCAAAACAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8440413 30 + 21915920 TGTATCAGTTCCCTAGGGTTGCAAAACAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15015273 30 - 90373283 TGTATCAGTTCCCTAGGGTTGCAAAACAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194652 30 + 4234846 TGTATCAGTTCCCTAGGGTTGCAAAACAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198684 30 - 13750039 TGTATCAGTTCCCTAGGGTTGCAAAACAAA i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13825152 30 + 39895921 tgtattagttttctggggttgcataacaaa i canFam3.chr31 C 0 I 3116 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78126018 193 + 98207768 I a score=2565423.000000 s hg38.chr21_KI270874v1_alt 77276 478 + 166743 TTATGACaatgaacaatgaatcaaaacaatgaatatcacaatgaatcaaagaaatgaaaatggaaatatgatatacaaacacctatgaggtacagcaaaagcagtatgatttggaaagtatattgcatacacatctacacctaaaaagtagaaaaacttgaaataaacaaccaaatgatgcatcttaaagaactaggaaaggaaaagcaaaccaaacctaaaatgagtagaagaaaaaaaaataaagatcagagcagaaataatattgaaatggagaaaacaatataaaatgttaacaaaacaaaaagttaatttttttaagagataaacaaaattgatatacctttagccagacttattaag-g-aaaaaaagaccaaaataaataaaatcagagattaaaagggacacattacaatggataccatggaaattcaaaggatcactagaggctataatgagcaac----tatatatatatatat s panTro5.chr21 3701753 480 + 33445071 TTATGACaatgaacaatgaatcaaaaaaatgaatatcacaatgaatcaaagaaatgaaaatggaaatatgatgtacaaacacctatgagatacagcaaaagcagtatgatttggaaagtatattgcatacacatctacacctaaaaagtagaaaaacttcaaataaacaaccaaaggatgcatcttaaagaactaggaaaggaaaagcaaaccaaacctaaaatgagtagaagaaaaaaaaataaagatcagagcagaaataatattgaaatggagaaaacaatataaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagccagacttattaag-gaaaaaaaagaccaaaataaataaaatcatagattaaaaaggacacattacaatggataccatggaaattcaaaggatcactagaggctacaatgagcaac--tatatatatatatatat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17328663 480 + 46275980 TTATGACaatgaacaatgaatcaaaaaaatgaatatcacaatgaatcaaagaaatgaaaatggaaatatgatgtacaaacacctatgagatacagcaaaagcagtatgatttggaaagtatattgcatacacatctacacctaaaaagtagaaaaacttcaaataaacaaccaaaggatgcatcttaaagaactaggaaaggaaaagcaaaccaaacctaaaatgagtagaag-aaaaaaaataaagatcagagcagaaataatattgaaatggagaaaacaatataaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagccagacttattaag-g-aaaaaaagaccaaaataaataaaatcatagattaaaaaggacacattacaatggataccatggaaattcaaaggatcactagaggctacaatgagcaactatatatatatatatatat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3267760 471 - 13858734 TTATCACAATGAACAATGAATCAAAA-AATGAATATCACAAAGAATCaaagaaatgaaaatggaaatatgatatacaaacacctatgagatacagcaaaagcagtatgatttggaaagtatattgcatacacatctacatctaaaaagtagaaaaatttc-aataaacaaccaaatgatgcatcttaaagaactaggaaagcaaaagcaaaccaaacctaaaatgagtagaagaaaaaaaaataaagatcagagcagaaataatattgaaatggagaaaacaatataaaatattaacaaaacaaaaagttga--tttttaagagataaacaaaattgatatacctttagccagac---ttaag-g-aaaaaaagtccaaaataaataaaatcagagattaaaaaggacacattacaatggataccatggaaattcaaaggatcactagaggctacaatgagcaac----tatacatatatatat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450442 449 + 32716333 TTATCACaataaacaatgaataaaaa-aatgaatatcacaatgaatcaaagaaacgaaaatggaaatatgatatacaaacacctatgagatacagcaaaagcagtatgatttggaaagtatattgcatacacatctacacctaaaaagtagaaaaacttcaaataaacaacctaatgatgcatcttaaagaactaggaaagcaaaagcaaaccaaacctaaaatgagtagagg-aaaaaaaataaagatcagagcagaaataatattgaaatggagaaaacaatataaaata---------------------------aagagatgaacaaaattgatatacttttagccagacttattaag-a-aaaaaaggaccaaaataaataaaatcagagattaaaaaggacacattacaatggataccatggaaattcaaaggttcactagaggctacaatgagcaac----tatatatatatatat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155405772 474 - 185818997 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatataaacacctatgaaatacagcaaaagcagtataatttggaaagtatattgcatacacatctacacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagcca-acttattaag-a-aaaaaaagaccaaaataaataaaatcagagattaaaaaggacacgttacaatggatacctcggaaattcaaaggatcac-agaggctacagtgagccgc----tatatatatatatat i rheMac8.chr3 C 0 I 5398 s macFas5.chr3 162230321 474 - 192294377 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatacaaacacctatgaaatacagcaaaagcagtataatttggaaagtatattgcatacacatctacacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagcca-acttattaag-a-aaaaaaagaccaaaataaataaaatcagagattaaaaaggacacgttacaatggatacctcggaaattcaaaggatcac-agaggctacagtgagccgc----tatatatatatatat i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 8710995 475 + 9440265 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatacaaacacctacgaaatacagcaaaagcagtataatttggaaagtatattgcatacacatctacacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagagaaacaaaattgatatacctttagcca-acttattaagaa-aaaaaaagaacaaaataaataaaatcagagattaaaaaggacacgttacaatggatacctcggaaattcaaaggatcac-agaggctacagtgagccac----tatatatatatatat i macNem1.NW_012019910v1 C 0 I 5418 s cerAty1.NW_012002954v1 8440443 475 + 21915920 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatacaaacacctatgaaatacagcaaaagcagtataatttggaaagtatattgcatacacatctacacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatatctttagcca-acttattaagaa-aaaaaaagaccaaaataaataaaatcagagattaaaaaggacacgttacaatggatacctcggaaattcaaaggatcac-agaggctacagtgagccgc----tatatatatatatat i cerAty1.NW_012002954v1 C 0 I 5413 s chlSab2.chr2 15015303 474 - 90373283 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatacaaacacctatgaaatacagcaaaagcagtataatttggaaagtatattgcatacacatctacacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaaggtcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatccctttagccg-acttattaag-a-aaaaaaagaccaaaataaataaaatcagagactaaaaaggacacattacaatggatacctcggaaattcaaaggatcac-agaggctacaatgagccac----tatatatctatatat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2194682 474 + 4234846 TTATCACCATGAACAATGAATCAAAAAAATGAATATCACAATGAATCaaacaaatgaaaatggaaatatgttatacaaacacctatgaaatacagcaaaagcagtataatttggaaagtatattgcatacacatctacacttaaaaagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaggacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatattaacaaaacaaaaagttga-ttttttaagagataaacaaaattgatatacctttagcca-acttattaag-a-aaaaaaagaccaaaataaataaaatcagagattaaaaaggacacgttacaatggatacctcggaaattcaaaggatcac-agaggctacagtgagccgc----tatatatatatatat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 198714 469 - 13750039 TTATCacaatgaacaatgaatcaaaaaaatgaatatcacaatgaaTCaaacaaatgaaaatggaaatacgttatacaaacacctatgaaatacagcaaaagcagtataatttggaaagtatattgcatacacatctacacttaaagagtagaaaaacttcaaataaacaacctaatgatgtatcttacagaactaggaaag-aaaagtaaaccaaacctaaaatgagtagaagaaaaaaagacaaagatcagagcagaaataatactgaaatggagaaaacaatacaaaatactaacaaaacaaaaagttga-ttttttaagagat----aaaattgatatacctttagccg-acttattaag---aaaaaaagaccaaaataaataaaatcagagattaaaaaggacacattacaatggatacctcggaaattcaaaggatcac-agaggctacaatgagccac----tgtatatatatatat i colAng1.NW_012120598v1 C 0 I 5415 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=1449.000000 s hg38.chr21_KI270874v1_alt 77754 2 + 166743 at s panTro5.chr21 3702233 2 + 33445071 at i panTro5.chr21 C 0 C 0 s panPan2.chr21 17329143 2 + 46275980 at i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3268231 2 - 13858734 at i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450891 2 + 32716333 at i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162230796 1 - 192294377 a- i macFas5.chr3 I 1 C 0 s chlSab2.chr2 15015777 2 - 90373283 at i chlSab2.chr2 C 0 I 5416 s manLeu1.NW_012102865v1 2195156 2 + 4234846 at i manLeu1.NW_012102865v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e colAng1.NW_012120598v1 199183 5415 - 13750039 I e cerAty1.NW_012002954v1 8440918 5413 + 21915920 I e macNem1.NW_012019910v1 8711470 5418 + 9440265 I e rheMac8.chr3 155406246 5398 - 185818997 I a score=6378.000000 s hg38.chr21_KI270874v1_alt 77756 6 + 166743 atatat s panTro5.chr21 3702235 6 + 33445071 atatat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17329145 6 + 46275980 atatat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3268233 6 - 13858734 agatat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450893 5 + 32716333 atata- i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162230797 6 - 192294377 atacat i macFas5.chr3 C 0 I 5407 s manLeu1.NW_012102865v1 2195158 6 + 4234846 atatat i manLeu1.NW_012102865v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e colAng1.NW_012120598v1 199183 5415 - 13750039 I e cerAty1.NW_012002954v1 8440918 5413 + 21915920 I e macNem1.NW_012019910v1 8711470 5418 + 9440265 I e chlSab2.chr2 15015779 5416 - 90373283 I e rheMac8.chr3 155406246 5398 - 185818997 I a score=1910.000000 s hg38.chr21_KI270874v1_alt 77762 3 + 166743 ata s panTro5.chr21 3702241 3 + 33445071 ata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17329151 3 + 46275980 ata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3268239 3 - 13858734 atc i gorGor5.CYUI01015003v1 C 0 I 128 s manLeu1.NW_012102865v1 2195164 3 + 4234846 ata i manLeu1.NW_012102865v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e colAng1.NW_012120598v1 199183 5415 - 13750039 I e cerAty1.NW_012002954v1 8440918 5413 + 21915920 I e macNem1.NW_012019910v1 8711470 5418 + 9440265 I e chlSab2.chr2 15015779 5416 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I e rheMac8.chr3 155406246 5398 - 185818997 I e nomLeu3.chr25 4450898 0 + 32716333 C a score=13650.000000 s hg38.chr21_KI270874v1_alt 77765 15 + 166743 tatatatatatatat s panTro5.chr21 3702244 15 + 33445071 tatatatatatatat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17329154 15 + 46275980 tatatatatatatat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3268370 15 - 13858734 tatatatatatatat i gorGor5.CYUI01015003v1 I 128 C 0 s manLeu1.NW_012102865v1 2195167 15 + 4234846 tatatatatatatat i manLeu1.NW_012102865v1 C 0 I 5414 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e colAng1.NW_012120598v1 199183 5415 - 13750039 I e cerAty1.NW_012002954v1 8440918 5413 + 21915920 I e macNem1.NW_012019910v1 8711470 5418 + 9440265 I e chlSab2.chr2 15015779 5416 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I e rheMac8.chr3 155406246 5398 - 185818997 I e nomLeu3.chr25 4450898 0 + 32716333 C a score=884690.000000 s hg38.chr21_KI270874v1_alt 77780 1021 + 166743 gagtattttgtcttttgggaatatacactgtatcagttccctagggttgcaaaacaaattatcacaatgaacagtgaatc-aaaaagatgaatatcacaatgaatcaaacaagtgaaa----atatatat-atatatatcaatacattgaaaagcctagaaaaagcagataaatttctagccacatttaacctaccaagactgaaccattaagaaatctaaaacctgaaaagaacaataacaagtaatgagatcaaagccacaataagacttccagtaaagaaaagcccaggaattgatgacttcactgctgaattttaccaaacatttaaggaaaagcaaatgccgatcctacacaaactgttccaaaaaatagaggagcatggatacctccaaactcattctgcaatgccagcattaccctgataccaaaaccaaagactcatcaagaaaagaaaactatacatcaatatcactgatgaacataggcgcaaaaatcctcaacagcatactagcaaaccaagttctgcaacatgtttaaaagattatttattatgaccaagggggatttattccaaggatgcaaggatgattcaacacacccaagtcaattagtataatacataatatcaacggactaaaggacaaaaaccatgtaatcctttcaattgatgcat-aaaaa-catttgacaaaactcaacatctcttcgtgattaaaacaattaaaaaactggatacagaagaaacataactc---aaaaaaaataaaagccatatacaacagacccacagctagtatcatactgaatgaggaaaaactgatggcttttcatctaagatctggaacaagacaagaatgcctacgttcaccactattattcaacataatattggaagtcctagctagagcaatcagacaagagaaaaaaataaagggcacccaactgggaaagaagaagtcagattatctttgtttgcagatgttatgaccttatatttggaaaaacctaaggactccag-aaaaaatatatt s panTro5.chr21 3702259 1021 + 33445071 gagtattttgtcttttgggaatatacactgtatcagttccctagggttgcaaaacaaatgatcacaaggaacagtgaatc-aaaaagatgaatatcacaatgaatcaaacaagtgaaa----atatatat-atatatctgaatacattgaaaagcctagaaaaagcagataaatttctagccacatttaacctaccaagactgaaccattaagaaatctaaaacctgaaaagaacaataacaagtaatgagatcaaagcaacaataagacttccagtaaagaaaagcccaggaactgatgacttcactgctgaattttaccaaacatttaaggaaaagctaatgccgatcctacacaaactgttccaaaaaatagaggagcatggatacctccaaactcattctgcaaggccagcattaccctcataccaaaaccaaagactcttcaagaaaagaaaactatacatcaatatcactgatgaacataggtgcaaaaatcctcaacagcatactagcaaaccaagttctgcaacatgtttaaaagattatttattatgaccaagggggatttattccaaggatgcaaggatgattcaacacacccaagtcaattagtataatacataatatcaacggactaaaggacaaaaaccatgtaatcctttcaattgatgcataaaaaa-catttgacaaaactcaacatctcttcatgattaaaacaattaaaaaactggatacagaagaaacttaactc---aaaaaaaataaaagccatatacaacagacccacagctagtatcatactgaatgaggaaaaactgatggcttttcatctaagatctggaacaagacaagaatgcctacgttcaccactattattcaatataatattggaagtcctagctagagcaatcagac--gagaaaaaaataaagggcatccaaccgggaaagaagaagtcaaattatctttgtttgcagatgttatgaccttatatttggaaaaacctaaggactccagaaaaaaatatatt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17329169 1019 + 46275980 gagtattttgtcttttgggaatatacactgtatcagttccctagggttgcaaaacaaatgatcacaatgaacagtgaatc-aaaaagatgaatatcacaatgaatcaaacaagtgaaaatatatatatat-atatatctgaatacattgaaaagcctagaaaaagcagataaatttctagccacatttaacctaccaagactgaaccattaagaaatctaaaacctgaaaag------aacaagtaatgagatcaaagcaacaataagacttccagtaaagaaaagcccaggaactgatgacttcactgctgaattttaccaaacatttaaggaaaagctaatgccgatcctacacaaactgttccaaaaaatagaggagcatggatacctccaaactcattctgcaaggccagcattaccctcataccaaaaccaaagactcttcaagaaaagaaaactatacatcaatatcactgatgaacataggcgcaaaaatcctcaacagcatactagcaaaccaagttctgcaacatgtttaaaagattatttattatgaccaagggggatttattccaaggatgcaaggatgattcaacacatccaagtcaattagtataatacataatatcaacggactaaaggacaaaaaccatgtaatcctttcaattgatgcataaaaaa-catttgacaaaactcaacatctcttcatgattaaaacaattaaaaaactggatacagaagaaacataactc---aaaaaaaataaaagccatatacaacagacccacagctagtatcatactgaatgaggaaaaactgatggcttttcatctaagatctggaacaagacaagaatgcctacgttcaccactattattcaatataatattggaagtcctagctagagcaatcagac--aagaaaaaaataaagggcatccaaccgggaaagaagaagtcaaattatctttgtttgcagatgttatgaccttatatttggaaaaacctaaggactccagaaaaaaatatatt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3268385 1018 - 13858734 GAGTATTTTGTCTTTTGGG-----ACACTATATCAGTTCCCTAGGGTTGCAAAACAAATTATCACAATGAACAGTGAATC-AAAAAGATGAATATCACAATGAATCAAACAAGTGAAA----ATATATAT-Atatatatcaatacattgaaaagcctagaaaaagcagataaatttctagccacatttaacctaccaagactgaaccattaagaaatctaaaacctgaaaagaacaataacaagtaatgagatcaaagccacaataagacttccagtaaagaaaagcccaggaattgatgacttcgctgctgaattttaccaaacatttaaggaaaagctaatgccgatcctacacaaactgttccaaaaaatagaagaggatggatacctccaaactcattctgcaaggccagcattaccctcatgccaaaaccaaagactcatcaagaaaagaaaactatacatcaatatcactgatgaacataggcacaaaaatcctcaacagcatactagcaaaccaagttctgcaacatgtttaaaagattatttattatgaccaagggggatttattccaaggatgcaaggatgattcaacacacccaagtcaattagtataatacataatatcaacggactaaaggacaaaaaccatgtaatcctttcaattgatgcataaaaaa-catttgacaaaactcaacatcttttcatgattaaaacaattaaaaaactggatacagaagaaacataactc-aaaaaaaaaataaaagccatatacaacagacctacagctagtatcatactgaatgaggaaaaactgatggcttttcatctaagatctggaacaagacaagaatgcctatgttcaccactattattcaacataatattggaagtcctagctagagcaatcagac--gagaaaaaaataaagggcatccaactgggaaagaagaagtcaaattatctttgtttgcagatgttatgaccttatatttggaaaaacctaaggactccagaaaaaaatatatt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4450898 1023 + 32716333 -agtattttgtcttttgggaatatacactgtatcagttccctagggttgcaaaacaaactatcacaatgaacaatgaatcaaaaaaaatgaacatcacaatgaatcaaa----tgaaa----atatatataaaatatatcaatacattgaaaagcctagaaaaagtagataaatttctagccacgtttaacctaccaagactgaaccattaagaaatctaaaacctgaaaagaacaacaacaagtaatgagatcaaagccacagtaagacttccagtaaagaaaagcccagtaattgatgacttcactgctgaatcttaccaaacatttaaggaaaagctaatgccaatcctactcaaactgttccaaaaaatagaggagcatggatacctccaaacttattctacaaggccagcattacccggataccaaaaccaaaggcacatcaa-aaaggaaaactatacatcaatataactgatgaacataggtgcaaaaatcctcaacagcatactagcaaaacaagttctgcaacatgtttaaaagattatttattatgaccaagtcagatttattccaaggatgcaaggatgattcaacacacccaagtcacttagtataatacataatatcaacagactaaaggacaaaaaccacgtgatcctttcaattgatgcagaaaaaatcatttgacaaaactcaacatctcttcgtgattaaaaaaattaaaaaactggatacagaagaaacataactcaaaaaaaaaaataaaaaccatatacaacagacccacagctagtatcatactgaatgaggaaaaactgatggcctttcatctaagatctggaacaagacaagaatacctacattcaccactattattcaacataatattggaagtcctagctagagcaatcagacaagagaaaaaaataaagggcatccaactgggaaagaagaagtcaaattatctttgtttgcagatgttatgaccttatatttggaaaaacctaaggactccagaaaaaaatatatt i nomLeu3.chr25 C 0 I 259 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e colAng1.NW_012120598v1 199183 5415 - 13750039 I e cerAty1.NW_012002954v1 8440918 5413 + 21915920 I e macNem1.NW_012019910v1 8711470 5418 + 9440265 I e manLeu1.NW_012102865v1 2195182 5414 + 4234846 I e chlSab2.chr2 15015779 5416 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I e rheMac8.chr3 155406246 5398 - 185818997 I a score=3690472.000000 s hg38.chr21_KI270874v1_alt 78801 4230 + 166743 agaatcaataaattcagtaatatttcaggttacaaaattaacatacaaaaaatcagtagcatttccatatgctagcagtgaacaatctgaaaaggatatcaagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttaagcgaaaaaagtaaaagttctctacaatgaaaactataaaacattgattaaagaaa-ttgaagaggacacaaaataatagaaagatattgcacgttcatgaattagaagactcaatattgttaaaatgttcatactatccaaagcaatctacagattcaatgcaatccctcaaaataccagtaacatccttcacagcaatagagaagaaaaaaattccaaaatttatatggaaccacgaaaatcaagaacagccaaagctatcctaagcaaaaagaacaaaactggaggaatcacatcacctgacttcaaattacaccacagagctatagtaaccaaaacagtatggtactggcattaaagcagacacatagaccaatggaaaagaatagagaacccagaaatgaatttatatatctacagtggactcattttcaacaaaggtgtcaagaacatactttggggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatatacagcacaatgaatctcgacccctatctctcatcatacacaaaaatcaaataaaaatgggttaaaaatttaaatctaaagaaactagtaaaagacttcaatcttatacttgcaaactgctataagaagcatgaggaaaactcttcaggacattggtctgagcaaagttttcttgagtaataccatacaagcacaggaaaccaaagcaaaaatgaacgaatgggattacatcaagttggaaaagcttctgaacagctacagaaacaatcaacaaagtgagaagacactccacagaatgggagaaaatatttgtaaactacccatctgacaagggattcataaccagaatatataaggagctcaaacgactcaatagtaaaaaacctaatacgctgatttttaaattggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtgttcagcatcattgatcatcagataaaaggaaatcaaagctataatgagatatcttctcactccagttaaaatggctctcatccagaaccaccactcaatccagcaatctcattgctggatatatagaggaaaataaatctttctaccataaagacatatgcacacaaatgtccattgcagcactattcacaatagcaaagacatggaatcaacatgaatgcccatcaatgacagattggataaggaaaatgtggtacatatacaccatggaatactatgcagccataaaaaaatgagatgatgtcatttgtgtgaacatggataaagctggacgttattattattagaaaactaacacaggaacagaaaactgaatgccacatgttctcacttataagtggaagctaaatgataagaacttatgaatacaaaggaaaaacaacagacactggggcctacttgagggggagagggaaaggaaagagaggagcaaaaaagataactattaggtacttggcttaatacttgggtaatgaaataatatgtacagcaaacctctgtgacatgtgtttacctatataaaaaaccttcacgtgtacccccaaacctaaaaaaaaaggtaaataaatatacaaataaataaaattacttttatcaaaatacaggcaacgacaaatgctggcaaggatgtgaaggaaagggaaccctcatacactgttgatgggaatgtaaattaataatacaaccactataaaggatggtttaaagtttcctcaaaaaactaaaaatacaactactatctgatccaacaatcccatttctaggtatctacccaaaagaaagaaaattagtatattgaaaagatatctccactcccatgtttattgtagcactattcacaatagccaaggtttgaagcaacctaagtgtccatcaacagatgaatagataaagaaaatgtgatacatatacatgatgaagtactattcagccataaaaaataatgaactcctgtcattttcactaacatggatggaactagaggtcattatgttaagtgaaataagccaggcacataaagacaaactttgcatgttctcacttattaatgtgagttaaaaattaagacgatggaactcatgaagatagagagtagaaatatggttaccagaggttaggaagggcaggaggggagtggggcaaaagtggggatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcacaacagggtgactacagtcatcaataacttattgtacatttcaaaataactaaaagagtataattggattgtttgttacataaggaaaggataaatgcttccagtgatttataccccatttaccctcatgtgattattatgtacaacatgcctgtatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaatattttaaaataatagaAAATTTTAAAATTAgttgcttaaagcaccagaaattaatcatctcacagttctataaatcagaaatgatagttttggcaaagttagttacttctggaggctctgaaggaaaatctgtttcatgtctctctcctagcttctggtgactatcaaagtaattggccatttcttgacctgtagacacattatttcaattgctgcctgtatctttacatggcctttccctctgtgggttctcttttgtatctgtgtgtctcaaacctgccttccttttccctcttataagggcaccagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtccttagttatgtctgcaaaaaccctatttccaaataagttcacattcacaaatactagagattaggtatcatgcatatctttttgaggaacaccattcaaccACTGTAgcctgccctcagccccctaaaatttacatctgtcctaaatggaaaatggggaatcacaccattccagcatcactcaaagttttccaattacagcatcaactctaaatccaaaatcttatctaaaagtcatctgctcaaaaagtcccaaatctaatattttaattatctaaatcaggtattggcaagactctccatatgatccatcttgggggaaaattcctcaccatctgtggacctataaaactataaaacgagttgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcattccaaaggagaaaactggaagaaataaaggggtcgctggtctccagtaagtttgaagccctacaggaaaaattctgttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtccactgggcccatgaaggctctcctctccggacttaaacagaacccatcctctgctcccaggaaggctc-gttggccactgcctctgcattcaaaatactgccctcagaattattactcttttttattgtaaaggggcacatatttgcaggcaaattactctattatcctttttctgcttgtagaattttgggagttcagaaacattcttttattttatccaattcctttcagccaaaactgttagaatttctcttggtataacattctcaaaaatgttgtgagtctcctttgtaattcatagggttccacatgattagacaagaggatactcaacagatccttccttgaacacttcatctctattgctggattctcctgagacattttattggctccataagt--cacacccaatctcttcaggaaaaggttgtccagccacacatttggccctgtccccagagaatgcttttctagcagcaaattttctaactttggcatcctttacaatgtgaatagaccaagaactgtccaaattatcaagtgctcattgcttttttgcatgagttccttcttccatttatctttttcctctggaattgtactataagctgcaacttcaacactttgcttggaaatttcctcagctaaatatccaagtttattgcttacaagttcccctctctcccaacagtagaccacaattcaaaca s panTro5.chr21 3703280 4222 + 33445071 agaatcaataaattcagtaatatttcaggttacaaaattaacacacaaaaaatcagtagcatttctatatgctagcagtaaacaatctgaaaaggatatcaagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttaagtgaaaaaagtaaaaattctctacaatgaaaactataaaacattgattaaat----ttgaagagtacacaaaataatagaaagatattgcacgttcatgaattagaagactcaatattgttaaaatgttcatactatccaaagcaatctacagattcaatgcaatccctcaaaataccagtaacatccttcacagcaatagagaagaaaaaaattccaaaatttatatagaaccacgaaaatcaagaacagccaaagctatcctaagcaaaaagagcaaaactggatgaatcacattacctgacttcaaattacaccacagagttatagtaaccaaaacagtatggtactggcattaaagcagacacatagaccaatggaaaagaatagagaacccggaaatgaatttatatatctacagccgactcattttcaacaaaggtgtcaagaacatactttggggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatatacagcacaatgaatctcgacccctatctctcatcatatacaaaaatcaaataaaaatgggttaaaaatttaaatctaaagaaactagtaaaagacttcaatcttatacttgcaaactactataagaagcatggggaaaactcttcagaacattggtctgggcaaagttttcttgagtaataccacacaagcacaggaaaccgaagcaaaaatgaacgaatgggattacatcaagttagaaaagcttctgaacagctacagaaacaatcaacaaagtgagaagacactccacagaatgggagaacatatttgcaaactacccatctgacaagggattcataaccagaatatataaggagctcaaacgactcaatagtaaaaaacctaataacctgatttttaaattggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtgttcaacatcattgaccatcagataaaaggaaatcaaagctataatgagatatcctctcactccagttaaaatggctctcatccagaactaccactcaatccagcaatctcattgctgggtatatagaggaaaataaatctttctaccataaagacacatgcacacaaatgtccattgcagcactattcacaatagcaaagacatggaatcaacatgaatgcccatcaatgacagattggataaggaaaatgtggtacatatacaccatggaatactatgcagccat-aaaaaatgagatgatgtcatttgtgtgaatatggatgaagctggacgctattgttattagaaaactaacacaggaacagaaaactgaatgccacatgttctcacttataagtggaagctaaatgataagaacttatgaacacaaaggaaaaacaacagacactggggtctacttgagggggagagggaaaggaaagagaggagcaaaaaagataactattaggtacttggcttaatacttgggtaatgaaataatatgtacagcaaaccgctgtgacatgtgtttacctatataaaaaaccttcacgtgaaaccccaaacct-aaaaaaaaggtaaataaatatacaaataaataaaattacttttatcaaaatacaggcaacgacaaatgctggcaaggatgtgaaggaaagggaaccctcatacactgttgatgggaatgtaaat---taatacaaccactataaaggatggtttaaagtttcctcgaaaaactaaaaatacaactactatctgatccaacaatcccatttctaggtatctacccaaaagaaagaaaattagtatattgaagagatatctccactcccatgtttattgtagcactattcacaatagccaaggtttgaagcaacctaagtgtccatcaacagatgaatagataaataaaatgtgatacatatacatgatgaagtactattcagccataaaaaataatgaactcctgtcattttcactaacatggatggaactagaggtcattatgttaagtgaaataagccaggcacataaagacaaactttgcatgttctcacttattaatgtgagttaaaaattaaaacgatggaactcatgaagatagagagtagaaatatggttaccagaggttaggaagggcaggaggggagtggggcaaaagtggggatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcacaacagggtgactacagtcatcaataacctattgtacatttcaaaataactaaaagagtataattggattgtttgttacataaggaaaggataaatgcttccagtgatttataccccatttaccctcatgtgattattatgtacaacatgcctgtatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaatattttaaaataatagaAAATTTTaaaattagttgcttaaagcaccacaaattaatcatctcacagttctataaatcagaaatgatggttttggcaaagttagttacttctggaggctctgaaggaaaatttgtttcatgtctctctcctagcttctggtgactatcaaagtaattggccatttcttgacctgcagacacattatttcaattgctgcctgtatctttacatggcctttccctctgtgggttctcttttgtatctgtgtgtctcaaacctgccttccttttccctcttataagggcacaagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtccttagttatgtctgcaaaaaccctatttccaaataagttcacattcacaaatactagaggttaggtatcatgcatatctttttgaggaacaccattcaaccACTATAgcctgccctcagccccctaaaatttacatctgtcctaaatggaaaatggggaatcacaccattccagcatcactcaaagatttccaattacagcatcaactttaaatccaaaatcttatctaaaagtcatctgctcaaaaagtcccaaatataatattttaattatctaaatcaggtattggcaagactctccatatgatccatcttgggggaaaattcctcaccatctgtggacctaaaaaactataaaacaagttgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcattccaaaggagaaaactggaagaaataaaggggtctctggtctccagtaagtttgaagcactacaggaaaaattctgttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtccactgggcccatgaaggctcccctctccggacttaaatagaatccatcctctgctcccaggaaggctc-gttggccactgcctctgcattcaaaatactgccctcagaattattactcttttttattgtaaaggggtatatgtttgcaggcaaattactctattatcctttttctgcttgtagaattttgggagttcagaaacattcttttattttatccaattcctttcagcaaaaactgttagaatttctcttggtataacattctcaaaaatattgtgagtctcctttgtaattcatagggttccacatgattagacaagaggatactcaacagatccttccttgaacacttcatctctattgctggattctcctgagacattttattggctccataagt--cacacccaatctcttcagtaaaaggttgtccagccacacatttggccctgtccccagagaatgcttttctagcagcaaattttctaactttggcatcatttacaatgtgaatagaccaagaactgtccaaattatcaagtgctttttgcttttttgcatgagttccttcttccatttatctttttcctctggaattgtactataagctgcaacttcaacactttgcttggaaatttcctcagctaaatatccaagtttattgcttacaagttcccctctctcccaacagtagatcacaattcaaaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17330188 4224 + 46275980 agaatcaataaattcagtaatatttcaggttacaaaattaacacacaaaaaatcagtagcatttctatatgctagcagtaaacagtctgaaaaggatatcaagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttaagtgaaaaaagtaaaaattctctacaatgaaaactataaaacattgattaaagaaatttgaagagtacacaaaataatagaaagatattgcacgttcatgaattagaagactcaatattgttaaaatgttcgtactatccaaagcaatctacagattcaatgcaatccctcaaaataccagtaacatccttcacagcaatagagaagaaaaaaattccaaaatttatatagaaccacgaaaatcaagaacagccaaagctatcctaagcaaaaagagcaaaactggatgaatcacattacctgacttcaaattacaccacagagttatagtaaccaaaacagtatggtactggcattaaagcagacacatagaccaatggaaaagaatagagaacccggaaatgaatttatatatctacagccgactcattttcaacaaaggtgtcaagaacatactttggggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatatacagcacaatgaatctcgacccctatctctcatcatatacaaaaatcaaataaaaatgggttaaaaatttaaatctaaagaaactagtaaaagacttcaatcttatacttgcaaactactataagaagcatggggaaaactcttcagaacattggtctgggcaaagttttcttgagtaataccacacaagcacaggaaaccgaagcaaaaatgaacgaatgggattacatcaagttagaaaagcttctgaacagctacagaaacaatcaacaaagtgagaagacactccacagaatgggagaacatatttgcaaactacccatctgacaagggattcataaccagaatatataaggagctcaaacgactcaatagtaaaaaacctaataacctgatttttaaattggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtgttcaacatcattgaccatcagataaaaggaaatcaaagctataatgagatatcctctcactccagttaaaatggctctcatccagaactaccactcaatccagcaatctcattgctgggtatatagaggaaaataaatctttctaccataaagacacatgcacacaaatgtccattgcagcactattcacaatagcaaagacatggaatcaacatgaatgcccatcaatgacagattggataaggaaaatgtggtacatatacaccatggaatactatgcagccat-aaaaaatgagatgatgtcatttgtgtgaatatggatgaagctggacgctattgttattagaaaactaacacaggaacagaaaactgaatgccacatgttctcacttataagtggaagctaaatgataagaacttatgaacacaaaggaaaaacaacagacactggggtctacttgagggggagagggaaaggaaagagaggagcaaaaaagataactattaggtacttggcttaatacttgggtaatgaaataatatgtacagcaaaccgctgtgacatgtgtttacctatataaaaaaccttcacgtgaacccccaaacct-aaaaaaaaggtaaataaatatacaaataaataaaattacttttatcaaaatacaggcaacgacaaatgctggcaaggatgtgaaggaaagggaaccctcatacactgttgatgggaatgtaaat---taatacaaccactataaaggatggtttaaagtttcctcgaaaaactaaaaatacaactactatctgatccaacaatcccatttctaggtatctacccaaaagaaagaaaattagtatattgaagagatatctccactcccatgtttattgtagcactattcacaatagccaaggtttgaagcatcctaagtgtccatcaacagatgaatagataaataaaatgtgatacatatacatgatgaagtactattcagccataaaaaataatgaactcctgtcattttcactaacatggatggaactagaggtcattatgttaagtgaaataagccaggcacataaagacaaactttgcatgttctcacttattaatgtgagttaaaaattaaaacgatggaactcatgaagatagagagtagaaatatggttaccagaggttaggaagggcaggaggggagtggggcaaaagtggggatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcacaacagggtgactacagtcatcaataacctattgtacatttcaaaataactaaaagagtataattggattgtttgttacataaggaaaggataaatgcttccagtgatttataccccatttaccctcatgtgattattatgtacaacatgcctgtatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaatattttaaaataatagaAAATTTTaaaattagttgcttaaagcaccacaaattaatcatctcacagttctataaatcagaaatgatggttttggc--agttagttacttctggaggctctgaaggaaaatttgtttcatgtctctctcctagcttctggtgactatcaaagtaattggccatttcttgacctgcagacacattatttcaattgctgcctgtatctttacatggcctttccctctgtgggttctcttttgtatctgtgtgtctcaaacctgccttccttttccctcttataagggcaccagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtccttagttatgtctgcaaaaaccctatttccaaataagttcacattcacaaatactagaggttaggtatcatgcatatctttttgaggaacaccattcaaccACTATAgcctgccctcagccccctaaaatttacatctgtcctaaatggaaaatggggaatcacaccattccagcatcactcaaagatttccaattacagcatcaactctaaatccaaaatcttatctaaaagtcatctgctcaaaaagtcccaaatctaatattttaattatctaaatcaggtattggcaagactctccatatgatccatcttgggggaaaattcctcaccatctgtggacctaaaaaactataaaacaagttgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcattccaaaggagaaaactggaagaaataaaggggtctctggtctccagtaagtttgaagcactacaggaaaaattctgttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtccactgggcccatgaaggctcccctctccggacttaaatagaatccatcctctgctcccaggaaggctc-gttggccactgcctctgcattcaaaatactgccctcagaattattactcttttttattgtaaaggggtatatgtttgcaggcaaattactctattatcctttttctgcttgtagaattttgggagttcagaaacattcttttattttatccaattcctttcagcaaaaactgttagaatttctcttggtataacattctcaaaaatattgtgagtctcctttgtaattcatagggttccacatgattagacaagaggatactcaacagatccttccttgaacacttcatctctattgctggattctcctgagacattttattggctccataagt--cacacccaatctcttcagtaaaaggttgtccagccacacatttggccctgtccccagagaatgcttttctagcagcaaattttctaactttggcatcatttacaatgtgattagaccaagaactgtccaaattatcaagtgcttgttgcttttttgcatgagttccttcttccatttatctttttcctctggaattgtactataagctgcaacttcaacactttgcttggaaatttcctcagctaaatatccaagtttattgcttacaagttcccctctctcccaacagtagatcacaattcaaaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3269403 4114 - 13858734 agaatcaataaattcagtaatatttcaggttac-aaattaatatacaaaaaatcagtagcatttctatatgctagcagtgaacaatctgaaaa-gatatcaagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttaagtgaaaaaagtaaaagttctctacaatgaa-------------------------------------------------------------------------------------------------ttcatactatccaaagcaatctccagattcaatgcaatccctcaaaataccagtaacatccttcacaccaatagagaagaaaaaaattcgaaaatttatatagaaccacaaaaatcaagaacagccaaagctatcctaagcaaaaggagcaaaactggaggaatcacattacctgacttcaaattacaccacagagctatagtaaccaaaacagtatggtactggcattaaagcagaaacatagaccaatggaaaagaatagagaacccggaaatgaatttatatatctacagcgcactcattttcaacaaaggtgtcaagaa-atactttggggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatatacagcacaatgaatctcggcccctatctctcatcatatacaaaaatcaaataaaaat-ggttaaaaatttaaatctaaagaaactagtaaaagacttcaatcttatacttgcaaactactataagaagcatggggaaaactcttcagaacattggtctgggcaaagttttcttgagtaataccacacaagcacaggaaaccaaagcaaaaatgaatgaatgggattacatcaagttagaaaagcttctgaacagctacagaaacaatcaacaaagtgagaagacactccacagaatgggagaaaatatttgcaaactacccatctgacaaggaattcataaccagaatatataaggagctcaaacaacccaatagtaaaaaacctaataacctgatttttaaattggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtgttcaacatcattgatcatcagataaaaggaaatcaaagctataatgagatatcctctcactccagttaaaatggctctcatccagaactaccactcaatccagcaatctcattgctgggtatatagaggaaaataaatctttctaccataaagacacatgcacacaaatgtccattgcagcactattcacaatagcaaagacatggaatcaacatgaatgcccatcaatgacagattggataaggaaaatgtggtacgtatacaccatggaatactatgcagccat-aaaaaatgagatgatgtcatttgtgtgaacatggatgaagct-gacgctattgttattagaaaactaacacaggaacagaaaac----tgccacatgttctcacttataagtggatgctaaatgataagaacttatgaacacaaa-gaaaaacaacagacactggggtctacttgaggggaaga-ggaaaggaaagacaggagcaaaaaagataactattaggtacttggcttaatacttgggtaatgaaataatatgtacagcaaaccgctgtgacatgtgtttacctatataaaaaaccttcacgtgtacccccaaacctaaaaaaaaaggtaaataaatatacaaataaataaaattacttttatcaaaatacaggcaatgacaaatgctggcaaggatgtgaaggaatgggaaccctcatacactgttgatgggaatgtaaat---taatacaaccactataaaggatggtttaaagtttcctcaaaaaactaaaaatacaactactgtctgatccaacaatcccatttctaggtatctacccaaaagaaagaaaattagtatattgaagagatatctccactcccatgtttattgtagcactattcacaatagccaaggtttgaagcaacctaagtgtccatcaacagatgaatagataaagaaaatgtgatacatatacatgatgaagtactattcagccataaaaaataatgaactcctgtcattttcactaacatggatggaactagaggtcattatgttaagtgaaataagctaggcacataaagataaactttgcatgttctcacttatta----gagttaaaaattaaaacgatggaactcatgaagatagagggtagaagtaaggttaccagaggctgggaagggcaggaggggagtggggcaaaagtggggatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcacaacagggtgactacggtcatcaataacttattgtacatttcaaaataactaaaagagtataattggattgtttgttacgtaaggaaaggataaatgcttccagtgatttttaccccacttaccctcatgtgattattatgtacaacatgcctatatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaatattttaaaataatagaAAATTTTAAAATTAgttgcttaaagcaccagaaattaatcatctcacagttctataaatcagaaatgatggttttggcaaggttagttacttctggaggctctgaaagaaaatctgtttcatgtatctctcctagcttctggtgactatcaaagtaattggccatttcttgacctgtagacacattatttcaattgctgcc-atatctttacatggcctttccctctgtgggttcttttttgtatctgtgtgtctcaaaccttccttccttttccctcttataagggcaccagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtcctttgttatgtctgcaaaaaccctatttccaaataagttcacattcacaaatactagaggttaggtatcatgcatatctttttgaggaacaccattcaaccAATGTAgcctgccctcagccccctaaaatttacatctgtcctaaatggaaaatggggaatcacaccattccagtatcattcaaagttttccaattacaacatcaactctaaatccaaaatcttatctaaaagtcatctgctcaaaaagtcccaaatctaatattttaattatctaagtcaggtattggcaagactctccatatgatccatcttgggggaaaattcctcactatctgtggacctataaaactataaaacaagttgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcattccaaaggagaaaactggaagaaacaaaggggtcactggtctccagtaagtttgaagccctacaggaaaaattctgttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtccactgggcccgtgaaggctatcctctccggacttaaagagaatccatcctctgctcccaggaaggctc-actggccactgcctctgcattcaaaatactgccctcagaataattactcttttttattgaaaaggggcacatgtttgcaggcaaattactctattatcctttttctgcttgtagaattttgggagttcagaaacattattttattttatccaatgtctttcagccaaaactgttagaatttctgttggtataacattctcaaaaatgttgtgagtctcctttgtaattcataggggtccacacgattagacaagaggatactcaacagatctttccttgaacacttcatctctatt-ctggattctcctaagacatttt-ttggctccgtaagtcacacacccaatctcttcagtaaaaggttgtccagccacacgtttggctctgtctccagagaatgcttttctagcagcaaattttctaactttggcatcctttacaatgtgaatagaccaagaactgtccaaattatcaagtgctagttgctttcttgcatgagttccttcttccatttatctttttcctctagaattgtactataagctgcaacttcaacactttgcttggaaatttcctcagctaaatatccaagtttattgcttacaagttctcctctctcccaacagtagatcacaattcaaaca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4452180 4209 + 32716333 agaatcaataaattcagtaatatttcaggttacaaaattaacatacaaaaaatcagtagcatttctacatgccagcagtgaacaatctgaaaaggatatcaagaaagtaatccaattataatagctataagtaaaattaaatacctactaataaacttaagtgaaaaaagtaaaagttctcaacaatgaaaactataaaacattgattaaagaaa-ttgaagaggacacaaaataatagaaagatattgcacgttcatgaattagaagactcaatattgttaaaatgttcatactatccaaagcaatctacagattcaatgcaatccctcaaaataccagtaacatccttcacagcaatagagaag-aaaaaattccaaaatttacatagaaccacaaaaatcaagaagagccaaaactaccctactcaaaaagaacaaaactggatgaatcacattacctgacttcaaattacaccacagagctatagtaaccaaaacagtatggtactggcattaaagc--------agaccaatggaaaagaatagagaacccagaaatgaatttatatatctacagtggactcattttcaacaaaggtgtcaagaacatactttgaggaatgacagtctcttcaatcaatgctgctgggaaaactggatatccatatacagcacaatcaatctcgacccctatctctcatcatatacaaaaatcaaataaaaatgggttaaaattttaaatctaaagaaactagtaaaagacttaaatcttatacttgcaaactactataagaagcatggggaaaactctttaggacattggtctgggcaaagttttcttgagtaataccacacaagcacaggaaaacaaagcaaaaatgaacgaatgggattacatcaagttagaaaagcttctgaacagctacagagacaatcaacaaagtgagaagacacgccacagaatgggagaaaatatttgcaaactacccatctgacaagggattcataaccagaatatataaggagctcaaacaactcaatagtaaaaaacctaataacctgatttttaaatgggcaaaagatctgaatagacatgtttcaaaagataacacacaaatggcaaacaggtatatgaaaaggtattcagcatcattgatcatcagataaaaggaaatcaaagctataatgagatatcctctcactccagttaaaatggctttCCTCcagaactactactcaatccagcaatctcattgctgggtatatagaggaaaataaatctttctaccataaagacacatgcacacaaatgtccactgcagcactattcacaatagcaaagacatggaatcaacataaatgcccatcaatgacagaatggataaggaaaatgtggtacatatacaccatggaatactatgcagccat-aaaaaatgagatgatatcatttgtgtgaacataaatgaagctggatgctattattattagaaaactaacacaggaacagaaaactgaatgccacatgttctcacttataagtggaagctaaatgataagaacttacgaacacaaaggaaaaacaacagacactggggtctacttgagggggagaggcaaaggaaagaggggagcaaaaaagataactattaggtacttggcttaatacttgggtaatgaaataatatgtacaacaaacccctgtgacatacgtttacctatataaaaaaccttcacgtgtacccccaaacctaaaataaaaggtaaataaaTATATAAATAAAtaaaattacttttatcaaaatacaggcaacaacaaatgctggcaaggatgtgaaggaaagggaaccctcatacactgttgatgggaatgtaaat---tagtacaaccattacaaaggatggtttaaagtttcctcaaaaaactaaaaatagaaccactgtctgatcc-acaatcccatttctaggtatctacccaaaagaaagaaaatgagtaaattgaagagatatctgcactcccatgtttattgtagcactattcacaatagccaaggtttgaagcaacctaagtgtccatcaacagataaatagataaagaaaatgtgatacatatacatgataaagtactattcagccataaaaaataatgaactcctgtcattttcactaacatggatggaactagaggtcattatgttaagtgaaataagccaggcacataaagacaaactttgcatgttctcacttattagtgtgagttaaaaattaaaacgatgggactcatgaagatagagagtagaagtatggttatcagaggctgggaagggcaggaggggagtggggcaaaa--ggggatggttaataggtatgaaaatatagttagatacactgaataatatctagtatttgatagcataacagggtgattacagtcatcaataacttattgtacatttccaaataactaaaagagtataattggattgtttgttacctaaggaaaggataaatgcttccagtcatttataccccatttaccctcatgtgattattatgtaccacatgcctgtatcaaaatatctcatgtaccccataaatatatgtacctactatgtacccacaaaaaatattttaaaaaAATAGAAAATTTTAAAATTAgttgcttaaagcaccagaaattaatcatctcacagttctataaatcagaaatgatggttttggcaaggttagttacttctggaggctctgaaggaaaatgtgtttcatg----tctcctagcttctggtgactatcaaagtaattggccatttcttgacctgtagacacgttatttcaattgctgcctgtatctttacatggccttcccctctgtgggttctcttttgtatctctgtgtctcaaaccttccttccttttccctcttataagggcaccagtaactgaatttaaggcctaatccagaatgatctcatcctaaggtccttagttatgtctgcaaaaaccctatttctaagtaagttcacattcacaaatactagaggttaggtatcatgcatatctttttgaggaacaccattcaaccACTGTAgcctgccctcagccccctaaaatttacatctgtcccaaatggaaaatggggaatcacaccattccagcatcattcatagttttccaattacagcatcaactctaactccaaaatcttacctaaaagtcttctgctcaaaaagtcccaaatctaatattttaattatctaaatcaggtattggcaagactcttcatatgagccgtcttgggggaaaattcctcaccatctgtggatctataaaacgataaaacaagctgtctgcttccaaaatacaaaggtgggataagcatagaaaaaacattctcattccaaaggggaaaactggaagaaataaaggggtcgctgttctccggaaagtttgaagccctacaggaaaaattctcttaggtttcaaaacctgagaaaattctccatagctcaaagctctgtcccctgggcccatgaaggctctcctctccggacttacagagaatccatcctctgctcccaggaaggctctgttggccactgcctctgcattcaaaatactgccctcagaatta-tactctttcttattgaaaatgggcacatgtttgcaggcaaattactctattatcttttttctgcttgtataattttgggagttcagaaacactctttgattttatccaatttctttcagccaaaactgttagaatttctgttggtataacattctcaaaaatgttgtgagtctcctttgtaattcataggggtccacatgattagacaaaaggatactcaatagatccttccttgaacacttcacctctgttgctggattatcctaagacattttattggctccatgagtcacacacccaatctcttcagtagaaggttgtccagccacacgtttggccctgtctccagagaatgcttttctagcagcaaattttctaactttggcatgctttacaatgtgaatagaccaagaactgtccaaataatcaagtgctggttgctttcttgcatgagttccttcttccatttatctttttcctctggaattgtactataagctgcaacttcaacactttgcttggaaaattcctcagctaaatatccaagtttattgcttaccagtt---ctctctccctacagtagatcacaattcaaaca i nomLeu3.chr25 I 259 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e colAng1.NW_012120598v1 199183 5415 - 13750039 I e cerAty1.NW_012002954v1 8440918 5413 + 21915920 I e macNem1.NW_012019910v1 8711470 5418 + 9440265 I e manLeu1.NW_012102865v1 2195182 5414 + 4234846 I e chlSab2.chr2 15015779 5416 - 90373283 I e macFas5.chr3 162230803 5407 - 192294377 I e rheMac8.chr3 155406246 5398 - 185818997 I a score=4549662.000000 s hg38.chr21_KI270874v1_alt 83031 806 + 166743 agttttctgccattttgtaataagaatcacctttcttccagtttccaataaaatgctcctcatttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggctttttctattatacacctaaaaattctttcagccacttgcacatt-tttaggtatttcttacagcagatcccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACAGAACCAGTGGGATGTTCACGGTatgtgacacatccccattatgaagggtaatcttctttatgtaaagtcagttgTCTTCTgccaggcagtgttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggatttcttgaggctaggagttagagaccagcctgggcaacatagtgagccccttctcaaaa-aaaaaaaaaaaaagaattgattagttgagtgtggtagtatgcccctgtagtcccagctacttgggaggctgaggtgaaaagatggcttgagctcaagagttcaaggctgcagtgagctatgattgcaccactgcactccagcctgggcaacacactgatatcctgtttAGTGTGAGATCCTCT------------AAACGAACAAACAAACAAAACACAGAGTTTATTGCctcatagaagcagagagtagaatagtggttaccacaggctgaggtgaaagagaaattggggtgatgttggtcaaggatacaatattttagt----taggaggaataagttcaagagatctattgtactgtacaacctg s panTro5.chr21 3707502 804 + 33445071 agttttctgccattttgtaataagaatcacctttcttccagtttccaataaaatgctcctcatttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggctttttctattatacacctaaaaattctttcagccacttgcacatt-tttaggtatttgttacagcagatcccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACAGAACCAGTGGGATGTTCATGGTatgtgacacatccccattatgaagggtaatcttctttatgttaagtcaattgTCTTCTgccaggcagtgttgctcatgcctgtaaccccagcactttgggaggcagaggcaagaggatctcttgaggctaggagttacagaccagcctgggcaacatagtgagccccttctc--aa-aaaaaaaaaaaaggaattgattagttgagtgtggtagtatgcccctgtagtcccagctacttgggaggctgaggggaaaagatggcttgagctcaagagttcaaggctgcagtgagctatgattgcaccactgcactccagcctgggcaacacactgatattctgtttAGTGTGAGATCCTCT------------AAACAAACAAACAAACAAAACACAGAGTTTATTGCctcatagaagcagagagtagaatagtggttaccacaggctgaggtgaaagagaaattggggtgatgttggtcaaggatacaatattttagt----taggaggaataagttcaagagatctattgtattgtacaacctg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17334412 804 + 46275980 agttttctgccattttgtaataagaatcacctttcttccagtttccaataaaatgctcctcatttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggctttttctattatacacctaaaaattctttcagccacttgcacatt-tttaggtatttgttacagcagatcccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACAGAACCAGTGGGATGTTCATGGTatgtgacacatccccattatgaagggtaatcttctttatgttaagtcaattgTCTTCTgccaggtagtgttgctcatgcctgtaaccccagcactttgggaggcagaggcaagaggatctcttgaggctaggagttacagaccagcctgggcaacatagtgagccccttctc--aa-aaaaaaaaaaaaggaattgattagttgagtgtggtagtatgcccctgtagtcccagctacttgggaggctgaggggaaaagatggcttgagctcaagagttcaaggctgcagtgagctatgattgcaccactgcactccagcctgggcaacacactgatatcctgtttAGTGTGAGATCCTCT------------AAACAAACAAACAAACAAAACACAGAGTTTATTGCctcatagaagcagagagtagaatagtggttaccacaggctgaggtgaaagagaaattggggtgatgttggtcaaggatacaatattttagt----taggaggaataagttcaagagatctattgtattgtacaacctg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3273517 808 - 13858734 agttttctgccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcct-atttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggctctttctattatgcacctaaaaattctttcagccacttgcacatt-tttaggtatttgttacagcagatcccactgtcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACAGAACCAGTGGGATGTTCATGGTatgtgacacatccccattatgaagggtaatcttctttatgtaaagtcaattgTCTTCTgccaggcactgttgctcatgcctgtaaccccagcactttgggaggctgaagcaagaggatctc--gaggctaggagttagagaccagcctgggcaacatagtgagctccttctc-----aaaaaaaaaaaaagaattgattagttgagtgtggtagtatg-ccctgtagtcccagctacttgggaggctgaggtgaaaagacggcttgagctcaagagttcaaggctgcagtgagctatgattgcaccactgcactccaacctgggcaacacactgatatcctgtttAGAGTGA-ATCCTCTaaacaaacaaacaaacaaacaaacaaacaaaACACAGAGTTTATTGCctcatagaagcagagagtagaatagtggttatcacaggctgaggtgaaagagaaattggggtgatgttggccaaggatgcaata-tttagt----taggaggaataagttcaagagatctattgtactgtacaacctg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4456389 794 + 32716333 agttttctgccattttgtaacaagaatcacc-ttcttccagtttccaataaaatgctc---atttcttcctgagatctcactagaaatacctttaatattcacatttctatcaaccatgtcttcaaggcaatttaggctttttctattatgcacct-aaaattctttcagccacttgcacatt-tttaggtatttgttacagcagaccccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACAGAACCGGTGGGATGTTCATGGTatgtgacacatccccattatgaagggtaatcttctttatgtaaagtcaattgTCTTCTgccaggcactgttgctcatgcctgtaaccccagcactttgggaggctgaggcacgagggtctcttgaggctaggagttagagaccagcctgggcaacataatgagccccttctc--------aaaaaaaaaagaattgattagttgagtgtggtagtatgcccctgtagtcccagctacttgggaggctgaggtgagaagatggcttgagctcaagagttcaaggctgcagtgagctatgattgaaccactacactccagcctgggcaatgcactgatatcctgtttAGAGTGAGATCCTCT------------AAACAAACAAACAAACAAAACACAGAGTTTATTGCcttatagaagcagagagtagaatagtggttaccacaggctgaggtgaaaaagaaattggggtgatgttggtcaaggatacaatatattaga----taggaggaataagttcaagagatctattgtactgtacaacatg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155411644 810 - 185818997 agttttctaccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACCGAACCAGTGGGATGTTCATGGTatgtgacacttccccattatgaaaggtaatcttctttatgtaaagtcagttgTCTGCTGGcaggcacagttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagaccagcctggacaatgtagagagccccttctc--aacaacaaaagaaaaataattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacggcttgagctcaagagttcaaggctgcagtgtgctatgattgcaccactgcactccagcctgggcaacacactgataccctgtttAGAGTGAGATCCTGT--------aaacaaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatg i rheMac8.chr3 I 5398 C 0 s macFas5.chr3 162236210 811 - 192294377 agttttctaccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAGAAAAAACCGAACCAGTGGGATGTTCATGGTatgtgacacttccccattatgaaaggtaatcttctttatgtaaagtcagttgTCTGCTGGcaggcacagttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagaccagcctggacaatgtagagagccccttctc--aacaacaaaagaaaaataattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacggcttgagctcaagagttcaaggctgcagtgtgctatgattacaccactgcactccagtctgggcaacacactgataccctgtttAGAGTGAGATCCTGT--------aaacaaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatg i macFas5.chr3 I 5407 C 0 s macNem1.NW_012019910v1 8716888 810 + 9440265 agttttctaccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattccactctcagtaccaaaTCTGTATCAGTCAGGATTCCATCAG-AAAAACCGAACCAGTGGGATGTTCATGGTatgtgacacttccccattatgaaaggtaatcttctttatgtaaagtcagttgTCTGCTGGcaggcacagttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagaccagcctggacaatgtagagagccccttctc--aacaacaaaagaaaaataattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacggcttgagctcaagagttcaaggctgcagtgtgctatgattgcaccactgcactccagcctgggcaacacactgataccctgtttAGAGTGAGATCCTAT--------aaacaaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatg i macNem1.NW_012019910v1 I 5418 C 0 s cerAty1.NW_012002954v1 8446331 810 + 21915920 agttttctaccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattctactctcaataccaaatctgtatcagtcaggattccatcag-aaaaaccgaaccagtgggatgtTCATGGTatgtgacacttccccattatgaaaggtaatcttctttatgtaaagtcagttgTCTGCTGGcaggcacagttgctcatgcctgtaaccccagcactttgggaagctgaggcaagaggacctcttgaggctaggagttagagaccagcctgggcaatgtagagagccccttctc--aacaacaaaagaaaaataattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtaaaaagacagcttgagctcaagagttcaaggctgcagtgtgctatgattgcaccactgcactccagcctgggcaacacactgataccctgtttAGAGTGAGATCCTGT--------aaacaaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatg i cerAty1.NW_012002954v1 I 5413 C 0 s chlSab2.chr2 15021195 806 - 90373283 agttttctaccattttgtaacaagaatcacctttcttccagtttccaaaaaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattccactctcagtaccaaaTCTGTATCTGTCAGGATTCCATCAG-AAAAACCGAACCAGTGGGATGTTCATGGTATGTGACACTTCCCTATTATGAAAGGTAATCTTCTTTATGTAAAGTCAGTTGTCTGCTGGcaggcacagttgctcatgcctataaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagaccagcctgggcaatgtagagagcctcttctc--aacaacaaaagaaaaataattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacggcttgagctcaagagttcaaggctgcagtgcgctatgattgcaccactgcactccagcctgggcaacacactgataccctgtttAGAGTGAGATCCTGT------------aaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatg i chlSab2.chr2 I 5416 C 0 s manLeu1.NW_012102865v1 2200596 810 + 4234846 agttttctaccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcctcattccttcctgagatctcactagaaatacctttaatattcacatttctatcaatcatgtcttcaaggcaatttaggctttttctattatgcacctaaaaattcttccagccacttccacattgttcagatatttgttacagcagattccactctcagtaccaaaTCTGTATCCGTCAGGATTCCATCAG-AAAAACCGAACCAGTGGGATGTTCATGGTatgtgacacttccccattatgaaaggtaatcttctttatgtaaagtcagttgTCTGCTGGcaggcacagttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttaaagaccagcctgggcaatgtagagagccccttctc--aacaacaaaagaaaaataattgagtagttgagtgtggtagtatgtccctgtagtcccagctacttgggaggctgaggtgagaagacggcttgagcccaagagttcaaggctgcagtgtgctatgattgcaccactgcactccagcctgggcaacacactgataccctgtttAGAGTGAGATCCTGT--------aagcaaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtgattaccacaggctgggatgaaagagaaattggggtgacgttggtcaaggatacaaaattttagt----taggaggaacaagttcaagagatctattgtactgtacaacatg i manLeu1.NW_012102865v1 I 5414 C 0 s colAng1.NW_012120598v1 204598 807 - 13750039 agttttctaccattttgtaacaagaatcacctttcttccagtttccaataaaatgctcctcatttcttcctgagatctcactagaaata--tttaatattcacatttctatcaaccatgtcttcaaggtaatttagactttttctattatgcacctaaaaattcttccagccacttccacattgttcag-tatttgttacagcagatctcactctcagtaccaaaTCTGTATCAGTTAGGATTCCATCAG-AAAAACTGAACCAGTGGGATGTTCATGGTatgtgacacttccccattatgaaaggtaatcttctttatgtaaagtcaattgTCTGCTGGcaggcacagttgctcatgcctgtaaccccagcactttgggaggctgaggcaagaggacctcttgaggctaggagttagagatcagcctgggcaatgtagtgagccccttctc--aacaacaaaagaaaaataattgagtagttgagtgtggtagtatgtccctgcagtcccagctacttgggaagctgaggtgagaagatggcttgagctcaagagttcaaggctgcagtgtgctatgattgcaccactgcactccagcctgggcaacacactgataccctgtttAGAGTGAGATCCTGT------------aaacaaacaaacaaacagaacaCGGAGTTTATTGCAtcatagaagcagagagtagaatagtggttaccacagactgggatgaaagagaaattggggtgatgttggtcaaggatacaaaattttagttagctaggaggaataagttcaagagatttattgtactatacaacatg i colAng1.NW_012120598v1 I 5415 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e otoGar3.GL873528 20747397 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=1487946.000000 s hg38.chr21_KI270874v1_alt 83837 245 + 166743 gtgactatagctaataataatgcattg-tatacttaaaaattgtta-aaagagtatattttaagtgtgctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatattgtgcaccataagtatgtacaa-tttttTGAGTCAAATGGGCAAATAAGTAAGTTTTTTTTAATGTCCACATAAAGATGGGCC s panTro5.chr21 3708306 245 + 33445071 gtgactatagctaataataatgcattg-tatacttaaaaattgtta-aaagagtatattttaagtatgctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatattgtgcaccataagtatgtacaa-tttttTGAGTCAAATGGGCAAATAAGTAAGTTTTTTTTAATGTCCACATAAAGATGGGCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17335216 245 + 46275980 gtgactatagctaataataatgcattg-tatacttaaaaattgtta-aaagagtatattttaagtgtgctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatattgtgcaccataagtatgtacaa-tttttTGAGTCAAATGGGCAAATAAGTAAGTTTTTTTTAATGTCCACATAAAGATGGGCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3274325 240 - 13858734 gtgactatagctaataataatgcatcg-tatacttaaaaattgtta-aaagagtatattttaagtgtgctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagtcattctacaatgtatacacatttcaaaacatcatattgtgcaccataagtatgtacaa-tttttTGAGTCAAATGGGCAAATAAG-----TTTTTTTAATGTCCACATAAAGATGGGCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457183 245 + 32716333 gtgactatagctaataataatgcattg-tacacttaaaaattgtta-aaagagtagattttaagtgtgctcatcacaagtaaatgatatattcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatattgtgcgccataagtatgtacaa-tttttTGAGTTAAATGGGCAAATAAGTAAGTTTTTTTAAATGTCCACATAAAGATGGGCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155412454 241 - 185818997 gtgactatagctaataataatgcattg-tatacttaaaaattgttt-aaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237021 241 - 192294377 gtgactatagctaataataatgcattg-tatacttaaaaattgttt-aaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8717698 241 + 9440265 gtgactatagctaataataatgcattg-tatacttaaaaattgttt-aaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8447141 242 + 21915920 gtgactatagctaataataatgcattg-tatacttaaaaattgtttaaaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022001 241 - 90373283 gtgactatagctaataataatgcattg-tatacttaaaaattgtta-aaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacgcatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2201406 241 + 4234846 gtgactatagctaataataatgcattg-tatacttaaaaattgtta-aaaaattagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcaaaacatcatactgtgtaccataagtatgcacaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 205405 241 - 13750039 gtgactatagctaataataatgcattg-tatacttaaaatttgtta-aaagagtagattttaagtgttctcatcacaagtaaatgatatgttcatgaagcaatgtatatgttaattatcttgatttagccattctacaatgtatacacatttcagaacatcatactgtgcaccataagcatgcaaaatttttTTGAGTTAAATAGGCAAATAAG-----TTTTTTAAATGTCCATGTAAAGATGGGTC i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20747397 238 - 38779656 gtaattatagctgataacaatgttttgttatacttgaaaattggtc-aaagagtaggct----gtgtttttgccataagtaagtgataaatatgtaagccaaaacatccattaattggtttgatttagccgttccaaaatgtatgaatatttcaaaacgtcatgctatacgccataaatatgtacaatttttgtcaattaaGTGGGTAAATTAT-----TTTCTTGAATATCTATGGAAAGGTGGGCC i otoGar3.GL873528 C 0 I 173 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=2470.000000 s hg38.chr21_KI270874v1_alt 84082 1 + 166743 G s panTro5.chr21 3708551 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17335461 1 + 46275980 A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3274565 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457428 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155412695 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237262 1 - 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8717939 1 + 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8447383 1 + 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022242 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2201647 1 + 4234846 G i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 205646 1 - 13750039 A i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20747808 1 - 38779656 G i otoGar3.GL873528 I 173 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3595710 1187 - 6883506 I e micMur3.chr31 19192282 5962 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=1023289.000000 s hg38.chr21_KI270874v1_alt 84083 161 + 166743 TATGAAA-------------------------------------------------------------ATAGTTTGTTATATAATAGATG--CTCCCCAAAGTTCCAGATCTCCAGAAAAGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACGGTCCAAAGAAAGATGGCAATTTAATAGATAGAAACCATAACAAc-aggcactgagctagaca s panTro5.chr21 3708552 161 + 33445071 TATGAAA-------------------------------------------------------------ATAGTTTGTTATATAATAGATG--CTCCCCAAAGTTCCAGATCTCCAGAAAAGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACGGTCCAAAGAAAGATGGCAATTTAATAGATAGAAACCATAACAAc-aggcactgagctagaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17335462 161 + 46275980 TATGAAA-------------------------------------------------------------ATAGTTTGTTATATAATAGATG--CTCCCCAAAGTTCCAGATCTCCAGAAAAGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACGGTCCAAAGAAAGATGGCAATTTAATAGATAGAAACCATAACAAc-aggcactgagctagaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3274566 156 - 13858734 TATGAAA-------------------------------------------------------------ATAGTTTGTTATATAATAGATG--CTCCCCAAAGTTCCAGATCTCCACAAAAGAAATAAATGGCATATTGCATGAG----------------AC---------AA---AATTTAAAACGGTCCAAAGAAAGATGGCAATTTAATAGATAG-AACCATAACAAc-aggcactgagctagaca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457429 161 + 32716333 TATGAAA-------------------------------------------------------------ATAGTTTGTTATATAATAGATG--CTCTCCAAAGTTCCAGATCTCCAGAAAAGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACAGTCCAAAGAAAGATGGCAATTTAATAGATAGAAATCATAACAAC-AGGCACTGAGCTAGACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155412696 163 - 185818997 TATGAAA-------------------------------------------------------------AGAGTTTGTTATATAATAGATGCCCCCCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237263 163 - 192294377 TATGAAA-------------------------------------------------------------AGAGTTTGTTATATAATAGATGCCCCCCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8717940 163 + 9440265 TATGAAA-------------------------------------------------------------AGAGTTTGTTATATAATAGATGCCCCCCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8447384 161 + 21915920 TATGAAA-------------------------------------------------------------AGAGTTTGTTATATAATAGATG--CCCCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACAGTCCAAAGAAGGATGGCAATTTAGTAAATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022243 162 - 90373283 TATGAAA-------------------------------------------------------------AGAGTTTGTTATATAATAGATG--CACCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAACAAGGCACTGAGCTAGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2201648 161 + 4234846 TATGAAA-------------------------------------------------------------AGAGTTTGTTATATAATAAATG--CCCCCCAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 205647 161 - 13750039 TATGAAA-------------------------------------------------------------AGAGTTTGTTATATAATAGATG--CCCCACAAAGTTCCAGATCTCCAGAAAGGAAATAAATGGCATATTGCATGAG----------------AC-----TAATAA---AATTTAAAACAGTCCAAAGAAAGATGGCAATTTAGTAGATAGAAACCATAACAAC-AGGCACTGAGCTAGACA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20747809 232 - 38779656 TGTGAAAACCCCACACTGTACCCCAGAAGTGCATTAATGTACATAGTTACCATTCAATTAAAAAAAATAGAATTTGCAATATACT-GACA--CTACCTTAAGTTCTAGAT---AATAAAAGCAA-AATTGGCATATTATGTGAGGACtaatattgatataac-----aaataa---aatttaaaataattaaaaGGAAGAAGATAATATAAAAGATAGACTCTGTAACAAC-AAGTACTG-GCTAGATA i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3596897 166 - 6883506 TATATGG-------------------------------------------------------------AGAGTTTACTATATACTAGACA--CTAACCTAATTTTCTGACACACAGAAAAAAAAC---TAGCACATCGCATATG----------------ATCCAAATAATAAATGAAATAAAAATAGCTAAGAGGATCATGGCATTCTAATATATAGAAACCATAATGAG-ATTCATTGTGCTAGACA i dasNov3.JH568778 I 1187 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19192282 5962 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=188183.000000 s hg38.chr21_KI270874v1_alt 84244 51 + 166743 cttccttaatactaatacacaagataagaattatt-----tccattttataaatgg s panTro5.chr21 3708713 51 + 33445071 cttccttaatactaatacacaagataagaattatt-----tccattttataaatgg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17335623 51 + 46275980 cttccttaatactaatacgcaagataagaattatt-----tccattttataaatgg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3274722 51 - 13858734 cttccttaatactaatacacaagataagaattatt-----tccattttataaatgg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457590 50 + 32716333 GTTCCTTAATACTAATACAGAA-ATAAGAattatt-----tccattttataaatgg i nomLeu3.chr25 C 0 C 0 s cerAty1.NW_012002954v1 8447545 51 + 21915920 CTTCCTTAATACTAATACAGAAAAGAAGAattatt-----tccattttacaaatgg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022405 51 - 90373283 CTTCCTTAATACTAATACAGAAGAGAAGAATTATT-----TCCATTTTACAAATGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2201809 51 + 4234846 CTTCCTTAATACTAATACAGAAAAGAAGAattatt-----tccattttacaaatgg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 205808 51 - 13750039 CTTCCTTAATACTAATACAGAAGAGAAGAattatt-----tccgttttacaaatgg i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20748041 51 - 38779656 GTTCccttgtagtaatccagaaggcaggaattatt-----tccattttgtaggtga i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3597063 56 - 6883506 CTCCTTTCAGGATAATCCAAaaggcaaagatcgttgactctccattttatagatgt i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19192282 5962 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e macNem1.NW_012019910v1 8718103 0 + 9440265 C e macFas5.chr3 162237426 0 - 192294377 C e rheMac8.chr3 155412859 0 - 185818997 C a score=913459.000000 s hg38.chr21_KI270874v1_alt 84295 196 + 166743 ggaagtcatggttcagc------tgtatgaagtcaatcgctactaataaaagtcaacatttaaatatgtgctacttgaaatctaccctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTCATAATGTTTATGAGAATGGACAGATAGTGCACGCAAAAGGAAATCTCTTCCTTGCACCC s panTro5.chr21 3708764 195 + 33445071 gg-agtcatggttcagc------tgtatgaagtcaatcgctactaataaaagtcaacatttaaacatgtgctacttgaaatctaccctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTCATAATGTTTATGAGAATGGACAGATAGTGCACACAAAAGGAAATCTCTTCCTTGCACCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17335674 196 + 46275980 ggaagtcatggttcagc------tgtatgaagtcaatcgctactaataaaagtcaacatttaaacatgtgctgcttgaaatctaccctgtatcaaagcccatgcattctccactgctcccagtggcctctttTAGAGATGCTCATAATGTTTATGAGAATGGACAGATAGTGCACACAAAAGGAAATCTCTTCCTTGCACCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3274773 195 - 13858734 ggaagtcatggttcagc------tgtatgaagtcaatcgctactaataaaagtcaaca-ttaaacatgtgctacttgaaatctaccctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTCATAATGTTTATGAGAATGGACAGATAGCGCACACAAAAGGAAATCTCTTCCTTGCACCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457640 193 + 32716333 ggaagtcacggttcagc------tatatgaagtcaatcgctactaataaaagtcaacatttaaacatgtgctacttgaaatctactctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTC---ATGTTTATGAGAAGGGACAGATAGTGCACACAAAAGGAAATCTCTTCCTTGCACCC i nomLeu3.chr25 C 0 C 0 s cerAty1.NW_012002954v1 8447596 196 + 21915920 ggaagtcatggttcaac------tgtatgaagtcaatcgctgctaataaaagtcaacgtttaaacatgtgctacttgaaatctactctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTCATAATGTTTATGGGAATGGACAGACAGTGTATACAAAAGGAAATCTCTTCCTTGTACCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022456 196 - 90373283 GGAAGTCATGGTTCAAC------TGTATGAAGTCAATCGCTGCTAATAAAAGTCAACGTTTAAACATGTGCTACTTGAAATCTACTCCATATCAAAGTCCATGCATTCTCCACTGCTCCCAGTGGCCTCTTTTAGAAATGCTCATAATGTTTATGGGAATGGACAGACAGTGTATACAAAAGGAAATCTCTTCCTTGTACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2201860 196 + 4234846 ggaagtcatggttcaac------tgtatgaagtcaatcgctgctaataaaagtcaacgtttaaacatgtgctacttgaaatctactctatatcaaagtccatgcattctccactgctcccagtggcctctttTAGAAATGCTCATAATGTTTATGGGAATGGACAGACAGTGTATACAAAAGGAAATCTCTTCCTTGTACCC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 205859 196 - 13750039 ggaagtcatggttcaac------tgtatgaagtcaattgcTGCTAATAAAAGTCAACATTTAAACATGTGCTACTTGAAATCTACTCTATATCAAAGTCCATGCATTCTCTACTGCTCCCAGTGGCCTCTTTTAGAAATGCTCATAATGTTTATGGGAATGGACAGACAGTGTATACAAAAGGAAATCTTTTCCTTGTACTC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19198244 196 + 47401472 ggaagtcacaattcagc------tatattaacttaatcactactaataaaagtcaatatttaaacatgtcctatttgaaatctacttgattccaaagtccatgcattctctactgcttccagtggtctctttTAGAAATGTTCACAGTGTTTGTAGCAATGGACATCCAGTATAAACAGAAGGAAATCTTTTCCAGATACCT i micMur3.chr31 I 5962 C 0 s otoGar3.GL873528 20748092 200 - 38779656 ggaagccaaggcacagctattgatatattaacttaatcactactaataaaagtcaatacttaaacttgttctatttgaaatctgcttgattccaaagtccacactctctctgctgcTTCTGATGATCTC--TTAGGAATACTCATGGTGTTTATAGAAATGAACATTCAGTATATACTTAAGGAAATCTTTTCCTGATACCC i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3597119 183 - 6883506 ggaaaccaaggttcaga------tatattaacttaattattgctaataaaggtcaagattcaaatatg------------attacttgattccaaagtccagacactctcttctgctcccaatggcc-atcCTAGGGATGTTCACAATGTTTCTGAGAATGGGCACCCAGTGTGTGCAGAGGAAAATCTCTTCTTCACACCT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I e macNem1.NW_012019910v1 8718103 0 + 9440265 C e macFas5.chr3 162237426 0 - 192294377 C e rheMac8.chr3 155412859 0 - 185818997 C a score=362479.000000 s hg38.chr21_KI270874v1_alt 84491 55 + 166743 AGCTCAACCACAACACCAAATTGACTTTGTCATAGTCTAGCTAAC-----------TTTTTTTTTT---- s panTro5.chr21 3708959 54 + 33445071 AGCTCAACCACAACACCAAATTGACTTTGTCATAGTCTAGCTAAC------------TTTTTTTTT---- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17335870 54 + 46275980 AGCTCAACCACAACACCAAATTGACTTTGTCATAGTCTAGCTAAC------------TTTTTTTTT---- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3274968 55 - 13858734 AGCTCAACCACAACACCAAATTGACTTTGTCATAGTCTAGCTAAC-----------TTTTTTTTTT---- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457833 66 + 32716333 AGCTCAACCACAGCACCAAATTGACTTTGTCATGGTCTAGCTAACTTTCTTTTTTTTCTTTTTTTT---- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155412859 60 - 185818997 AGCTCAACCACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC------TTTTTTTTTTTTTTT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237426 60 - 192294377 AGCTCAACCACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC------TTTTTTTTTTTTTTT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718103 58 + 9440265 AGCTCAACCACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC--------TTTTTTTTTTTTT---- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8447792 60 + 21915920 AGCTCAACCACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC------TTTTTTTTTTTTTTT---- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022652 57 - 90373283 AGCTCAACTACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC---------TTTTTTTTTTTT---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202056 61 + 4234846 AGCTCAACCACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC-----TTTTTTTTTTTTTTTT---- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206055 58 - 13750039 AGCTCAACCACAACACCAAATTGTCTTTGTCATGGTCTAGCTAAC--------TTTTTTTTTTTTT---- i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19198440 55 + 47401472 AGTTCAACAACAACATCAAATTGACTTTGTCATGGCCTAGTTGCC-----------TTTTTTTTTT---- i micMur3.chr31 C 0 I 1126 s otoGar3.GL873528 20748292 43 - 38779656 AGCTGAATAAGAGAATCAAATTGA------------CTATTTGGT-----------TTTTTTTTTT---- i otoGar3.GL873528 C 0 I 4 s dasNov3.JH568778 3597302 52 - 6883506 AGTTTGAC---ATTACCAGATTAACCTTATCATGGTTTAGTTGCC---------------TTCTTTAAAA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=567406.000000 s hg38.chr21_KI270874v1_alt 84546 90 + 166743 --ACAAAATAATAACCCCATAGAACACACAGACAAAAACATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTGCCAACC s panTro5.chr21 3709013 90 + 33445071 --ACAAAATAATAACCCCATAGAACACACAGATAAAAACATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTGCCAACC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17335924 90 + 46275980 --ACAAAATAATAACCCCATAGAACACACAGATAAAAACATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTGCCAACC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275023 90 - 13858734 --ACAAAATAATAACCCCATAGAACACACAGACAAAAACATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTGCCAACC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457899 90 + 32716333 --ACAAAATAATAACCCCATAGAACATACAGACAAAAACATACACACCATCCAAAAAGTTTATACAACAAAAAGTAAGTTTTATTTCCAAcc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155412919 90 - 185818997 --ACATAATAATAACCCTGTAGAACATACACACAAAAACATACGCACCATTCAAAAAGTATATACAATAAAAAGTAAATTTTATTACCTACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237486 90 - 192294377 --ACATAATAATAACCCTGTAGAACATACACACAAAAACATACGCACCATTCAAAAAGTATATACAATAAAAAGTAAATTTTATTACCTACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718161 90 + 9440265 --ACATAATAATAACCCTGTAGAACATACACACAAAAACATACGCACCATTCAAAAAGTTTATACAATAAAAAGTAAATTTTATTACCAACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8447852 90 + 21915920 --ACATAATAATAACCCTGTAGAACATACAGACAAAAACATACGCACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTTCCAACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022709 90 - 90373283 --ACATAATAGTAACCCTGTAGAACATACATACAAAAGCATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTTCCAACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202117 90 + 4234846 --ACATAATAATAACCCTGTAGAACATACACACAAAAACATACGCACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTTTTTCCAACC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206113 90 - 13750039 --ACATAATAATAACCCTGTAGAACATACACACAAAAACATACACACCATTCAAAAAGTTTATACAATAAAAAGTAAGTTTTATTTCCAACC i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20748339 84 - 38779656 --AAAAAATAATAACTTCATAGAA---ACACACGCACACACACAC-CCATCTGAAAGGTTTTTAC--CAAAAAGTGAGTTTTATTTCCACGC i otoGar3.GL873528 I 4 C 0 s dasNov3.JH568778 3597354 86 - 6883506 AACAAAAATAACATATCCATAAATTGTACACGC----ACATACACACAA--CCAAATGTTTACACAATGAAAAGTGAGTTTTATTCCCAATC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19198495 1126 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78126018 193 + 98207768 I a score=43387.000000 s hg38.chr21_KI270874v1_alt 84636 6 + 166743 CAGATA s panTro5.chr21 3709103 6 + 33445071 CAGATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336014 6 + 46275980 CAGATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275113 6 - 13858734 CAGATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457989 6 + 32716333 cagata i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413009 6 - 185818997 CAGATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237576 6 - 192294377 CAGATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718251 6 + 9440265 CAGATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8447942 6 + 21915920 CAGATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022799 6 - 90373283 CAGATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202207 6 + 4234846 CAGATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206203 6 - 13750039 CAGATA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20748423 5 - 38779656 CAGAC- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78126211 6 + 98207768 CAGGTA i mm10.chr16 I 193 C 0 s dasNov3.JH568778 3597440 6 - 6883506 TAAGTA i dasNov3.JH568778 C 0 I 63 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19198495 1126 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=557352.000000 s hg38.chr21_KI270874v1_alt 84642 93 + 166743 CCTAATCTCATTCTTCACAGGTAAGCTTCATCAATATTTCTTA---------------CATATCTTT-TTAAAAAATTCCCAGGCCCATCTAttcttctacatcttttt s panTro5.chr21 3709109 93 + 33445071 CCTAATCTCATTCTTCACAGGTAAGCTTCATCAATATTTCTTA---------------CATATCTTT-TTAAAAAATTCCCAGGCCCATCTAttcttctacatcttttt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336020 93 + 46275980 CCTAATCTCATTCTTCACAGGTAAGCTTCATCAATATTTCTTA---------------CATATCTTT-TTAAAAAATTCCCAGGCCCATCTAttcttctacatcttttt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275119 92 - 13858734 CCTAATCTCATTCTTCACAGGTAAGCTTCATCAATATTTCTTA----------------ATATCTTT-TTTAAAAATTCCCAGGCCCATCTAttcttctacatcttttt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4457995 93 + 32716333 cctaatctcattcttcacaggtaagcttcatcagtatttctta---------------catatcttt-tttaaaaattcccaggcacatctattcttctacatcttttt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413015 93 - 185818997 CCTAATCTCATTTTTCACAGCTAAGTTTCATCAATATTTCTTA---------------CATGTCTTT-AAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237582 93 - 192294377 CCTAATCTCATTTTTCACAGCTAAGTTTCATCAATATTTCTTA---------------CATGTCTTT-AAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718257 93 + 9440265 CCTAATCTCATTTTTCACAGCTAAGTTTCATCAATATTTCTTA---------------CATGTCTTT-AAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8447948 93 + 21915920 CCTAATCTCATTTTTCACAGCTAAGTTTCATCAATATTTCTTA---------------CATATCTTT-AAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022805 93 - 90373283 CCTAATCTCATTTTTCACAGGTAAGTTTCATCAATATTTCTTA---------------CATATCTTT-AAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202213 93 + 4234846 CCTAATCTCATTTTTCACGGCTAAGTTTCATCAATATTTCTTA---------------CATATCTTT-AAAAAAAATCCCCAGGCCCATCTATTCTTCTACATATTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206209 94 - 13750039 CTTAATCTCATTCTTCACAGGTAAGCTTCATCAATATTTCTTA---------------CATATCTTTAAAAAAAAATCCCCAGGCCCATCTATTCTTCTACATCTTTTT i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20748428 86 - 38779656 TCTAGTCTCACTCTTCTAAGGGAACTGTGAACA-------TTA---------------CATATCTTT-TCAAAAATTTCCCAGGCCTGTAAATTGTTCTGTATCttttt i otoGar3.GL873528 C 0 I 225 s mm10.chr16 78126217 96 + 98207768 CCCATTCCTAGTCCTAGTGGATCA--TTCACCAACAtttttaagggttttttaagggttttttTTTT-TCAGAAACTTCC----------TATTCTCCCGCATCTTTCT i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19198495 1126 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=227031.000000 s hg38.chr21_KI270874v1_alt 84735 38 + 166743 aaagacaaaaaggagtaatatatttgacactttgttct s panTro5.chr21 3709202 38 + 33445071 aaagacaaaaagaagtaatatatttgacactttgttct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336113 38 + 46275980 aaagacaaaaagaagtaatatatttgacactttgttct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275211 38 - 13858734 aaagacaaaaagcagtaatatatttgacactttgttct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458088 38 + 32716333 aaagacaaaaaggagtaatatatttgacatgttgttct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413108 38 - 185818997 AAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237675 38 - 192294377 AAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718350 38 + 9440265 AAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448041 38 + 21915920 AAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022898 38 - 90373283 AAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202306 38 + 4234846 AAAGAGAAAAAGGAGTAATATATTTGACACTTTGTTCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206303 38 - 13750039 AAAGACAAAAAGGAATAATATATTTGACACTTTGTTCT i colAng1.NW_012120598v1 C 0 C 0 s mm10.chr16 78126313 30 + 98207768 AAGCATAAAGAGGAGAGTTATAT--------TTGTTCT i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19198495 1126 + 47401472 I e otoGar3.GL873528 20748514 225 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=1976494.000000 s hg38.chr21_KI270874v1_alt 84773 336 + 166743 gtaccttgcttttgtttccttttttctttcttttttcttgtaaattagg-tattttctcctcagc--acataga--ggattacaccatttattttaatgggtagtttattt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgcttttagggttttcttgctttttgatgttccaacaaagctgAACTCAACTTTTTCACACATGTGGGTGTTGTTTTCTTTTGCTCTCCTTCTTATTCAGCCCAGCTGTTCATCTCTGAGAGTCACATGGCCCTTGGTGTTTGCTATCTACTGTTCT--TGTGCAGTGCCGAAACTCCCTTGCAAAAG-AA s panTro5.chr21 3709240 336 + 33445071 gtaccttgcttttgtttccttttttctttcttttttcttgtaaattggg-tattttctcctcagc--acataga--ggattacaccatttattttaatgggtagtttattt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgcttttagggttttcttgctttttgatgttccaacaaagctgAACTCAACTTTTTCACACGTGTGGGTGTTGTTTTCTTTTGCTCTCCTTCTTATTCAGCCCAGCTGTTCATCTCTGAGAGTCACATGGCCCTTGGTGTTTGCTATCTACTGTTCT--TGTGCAGTGCAGAAACTCCCTCACAAAAG-AA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336151 336 + 46275980 gtaccttgcttttgtttccttttttctttcttttttcttgtaaattggg-tattttctcctcagc--acataga--ggattacaccatttattttaatgggtagtttattt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgcttttagggttttcttgctttttgatgttccaacaaagctgAACTCAACTTTTTCACACGTGTGGGTGTTGTTTTCTTTTGCTCTCCTTCTTATTCAGCCCAGCTGTTCATCTCTGAGAGTCACATGGCCCTTGGTGTTTGCTATCTACTGTTCT--TGTGCAGTGCAGAAACTCCCTCACAAAAG-AA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275249 334 - 13858734 gtaccttgcttttgtttccttttttctttcttttttcttgtaaattggg-tattttttcctcagc--aaataga--ggactacaccatttattttaatgggtagtttattt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgcttttagagttttcttgctttttgatgttccaacaaagctgaagtcaactttttcacacatgtgGGTGTTGTTTTTCTTTGCTCTCCTTCTTATTCAG-CCAGCTGTTCATCTCTGAGAGTCACAC-GCCCTTGGTGTTTGCTATCTACTGTTCT--TGTGCAGTTGAGAAACTCCCTCACAAAAG-AA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458126 337 + 32716333 gtaccttgcttttgtttccttttttctttcttttttcttgtaagtcggg-tattttttcctcagc--acataga--ggtctacgccatttattttaatgggtagtttattt---------tatgtctatacaataatacatttaaccagttctctgtcagtgtgctttcagggttttcttgctttttgatgttccaacaaagctgAATTCAACTTTTTCACACATGTGGGTGTTGTTTTCTTTTGCTCTCCTTCTTATTCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTGTTCT--TGTGCAGTTCAGAAACTCCCTTGCAAAAGAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413146 337 - 185818997 GCAGCTTGCctttgtttccttttttctttcttttttcttGTAAAAAAGG-TTTTTTTTCCTCAGC--ACATCAA--GGTCTACACCATTTATTTTAATGGGTAGTTTATTT---------TATATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGATTTTCTTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACAAGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCT--TGTGCAGTTCAGAAACTCCCTTGCAAAAGAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162237713 338 - 192294377 GCAGCTTGCctttgtttccttttttctttcttttttcttGTAAAAAAGGTTTTTTTTTCCTCAGC--ACATCAA--GGTCTACACCATTTATTTTAATGGGTAGTTTATTT---------TATATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGATTTTCTTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACAAGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCT--TGTGCAGTTCAGAAACTCCCTTGCAAAAGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718388 337 + 9440265 GCAGCTTGCctttgtttccttttttctttcttttttcttGTAAAAAAGG-TTTTTTTCCCTCAGC--ACATCAA--GGTCTACACCATTTATTTTAATGGGTAGTTTATTT---------TATATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGATTTTCTTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACAAGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCT--TGTGCAGTTCAGAAACTCCCTTGCCAAAGAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448079 334 + 21915920 GCAGCTTGCCTTTGTTTCCTTTTTTCTTCCTTTTTTCTTGTAAAAAAGG-TTTTTTTTCCTCAGC--ACATCAA--GGTCTACACCATTTATTTTAATGGGTAGTTTATTT---------TATATCTCTACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGATT---TTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACAAGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCGATCTACTATTCT--TGTGCAGTTCAGAAACTCCCTTGCAAAAGAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15022936 337 - 90373283 GCAGCTTGCctttgtttccttttttctttcttttttcttGTAAAAAAGG-TTTTTTTTCCTCAGC--ACATCAA--GGTCTACACCATTTATTTTAATGGATAGTTTATTT---------TATATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGGTTTTCTTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACACGTGTGGGTGTTGGTTTCTTTCGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCT--TGTGCAGTTCAGAAACTCCCTTGCAAAAGAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202344 337 + 4234846 GCAGCTTGCctttgtttccttttttctttcttttttcttGTAAAAAAGG-GTTTTTTTCCTCAGC--ACATCAA--GGTCTACACCATTTATTTTAATGGGTAGTTTATTT---------TATATCTATACAATAATACATGTAACCAGTTCTCTGTCAGGGTGCTTTTAGGATTTTCTTGTTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACAAGTGTGGGTGTTGGTTTCTTTCGCTTTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACACGGCCCTTGGTGTTTGCTATCTACTATTCT--TGTGCAGTTCAGAAACTCCCTTCCAAAAGAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206341 338 - 13750039 GCAGCTTGCTtttgtttccttttttctttcttttttcttGTAAATAAGG--TTTTTTTCCTCAGC--ACATCAATTTATTTTAACCATTTATTTTAATGGGTAGTTTATTT---------TATGTCTATACAATAATACATGTAACCAGGTCTCTGTCAGTGTGCTTTTAGGGTTTTCTTGCTTTTTAATGTTCCAACAAAGCTGAATTCAACTTTTTCACACGTGTGGGTGTTGGTTTCTTTTGCTCTGCTTCTTATGCAGCCCAGCTGTTCATCTCTGAGTGTCACATGGCCCTTGGTGTTTGCTATCTACTGTTCT--TGTGCAGTTCAGAAACTCCCTTGCAAAAGAAA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20748739 318 - 38779656 ATTCCTTATTTTCTTTTTCTTTCTTCTTT-TTTTGCCTAATAAATAAGA-TAAATTTCTATATGCTGAGAAAAA--AATCT----TATTTATTTTG------TGTCTA-TA---------CATTACTATACATTAATACATTTAACCAATTGCCT-TCAATGGGCTTTTAGGGTTTTTTCACTTTTTGATATCTCTACAAAGTTGAATATAACTTTTTCACACATGTGAGTTTTGATTTCTTTTCCTC---------TTCAGCCCAGCTACTTATCTCCCAGTATAACACAGACCTTCCTGTTTGCTGTCTGCCATTCTTATGTACGGATCAGTAACTCATTTGAAAAAAAA- i otoGar3.GL873528 I 225 I 6 s mm10.chr16 78126343 290 + 98207768 GTAC--------TGTTAACTGT-TTCTCCTTTCTGTCTGACTAATGGAA-TTCATTTTTCTTCAC--ATACCTG----------------CTTTCAGTGAACAGTTTGGCTGAGAGTAACTATTTGTCCCTATTGATGCACTTAAACATTTCTTCATCCATATG------------TCATATTTT---ATACTCAAGCAAAGATGAAGGTGAGTTTTCCATACACCTGAG------TTGCCTCTGCTCT-----------AGCCTGAAATCCCCACCCCATGTGTCAGTCAGTGCTCAGTTTTGGCTGTCTACTCTTCC--TGTGCAAACCAGAGACTTCTTCATAAAAGAA- i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19198495 1126 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=352678.000000 s hg38.chr21_KI270874v1_alt 85109 48 + 166743 AAATCTCTAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAGCTTTAAGAG s panTro5.chr21 3709576 48 + 33445071 AAATCTCTAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAGCTTTAAGAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336487 48 + 46275980 AAATCTCTAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAGCTTTAAGAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275583 48 - 13858734 AAATCTCTAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAGCTTTAAGAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458463 48 + 32716333 AAACCTGTAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAGCTTTAAGAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413483 48 - 185818997 AAATTTCAAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAACTTTAAGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238051 48 - 192294377 AAATTTCAAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAACTTTAAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718725 48 + 9440265 AAATTTCAAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAACTTTAAGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448413 47 + 21915920 AAATTTCAAGGGAGATTCTTG-----CATTTG-----TTC-CTACAGAACTTTAAGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023273 48 - 90373283 AAATTTCGAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAACTTTAAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202681 47 + 4234846 AAATTTCAAGGGAGATTCTTG-----CATTTG-----TTC-CTACAGAACTTTAAGAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206679 48 - 13750039 AAACCTCGAGGGAGATTCTTG-----CATTTG-----TTCTCTACAGAACTTTAAGAG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19199621 48 + 47401472 AAATCTCTATGGAGATTCTTG-----CATTTG-----TTCTCTAAAAAGCTTTAAGAG i micMur3.chr31 I 1126 I 78 s otoGar3.GL873528 20749063 48 - 38779656 AAATCTCTAGAAAGATTCTTA-----CATTTG-----TTCCCTAAAGAGCTATAAGAA i otoGar3.GL873528 I 6 C 0 s mm10.chr16 78126633 50 + 98207768 --------AAGGTGACTATAGACAAACAGTTGAATAATTCTATATGGAGCTTCAGGAA i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=507080.000000 s hg38.chr21_KI270874v1_alt 85157 77 + 166743 CAATACGGGTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA s panTro5.chr21 3709624 77 + 33445071 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---G------CTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336535 77 + 46275980 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275631 77 - 13858734 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458511 77 + 32716333 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413531 77 - 185818997 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238099 77 - 192294377 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718773 77 + 9440265 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448460 77 + 21915920 CAATATGGTTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTAAAAACAGATCTTCA------TAGGTTAACTTCTAACTTTAAATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023321 77 - 90373283 CAATATGGGTAAGCAAG--TA--TCACAATTTAGAT---G------TTACTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202728 77 + 4234846 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---A------TGATTAAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206727 77 - 13750039 CAATATGGGTAAGCAAG--TG--TCACAATTTAGAT---G------TTATTGAAAACAGATCTTCA------TAGGTTAACTTCTAACCTTAAATA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20749111 85 - 38779656 CAATACGGGTAAGCAAGTCTG--TTGTGACTTAGAT---GTTACTCTTATTATAAACAGAACTTAA------AAGGTAAACTTCCAACCCCAATAA i otoGar3.GL873528 C 0 I 2 s mm10.chr16 78126683 80 + 98207768 CACTACCATTTTGCAAG--TGTCTCATAGTTTAGATTTGG------CCCTTATTGACCAATCTGCACTACTGTAAATTAACTTCCAAC-------- i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19199669 78 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=1621031.000000 s hg38.chr21_KI270874v1_alt 85234 212 + 166743 TTATACAACGTTGTAATAAGAAACATGGCAAGGAAATTTAAAAATGCTTGCCAAAGTTAAA-AGAAAC-------CAATCACATTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATG s panTro5.chr21 3709701 209 + 33445071 TTAT---ACGTTGTAATAAGAAACATGGCAAAGAAATTTAAAAATGCTTGCCAAAGTTAAA-AGAAAC-------CAATCACATTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336612 209 + 46275980 TTAT---ACGTTGTAATAAGAAACATGGCAAAGAAATTTAAAAATGCTTGCCAAAGTTAAA-AGAAAC-------CAATCACATTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275708 212 - 13858734 TTATACAACGTTGTAATAAGAAACATGGCAAAGAAATTTAAAAATGCTTGCCAAAGTTAAA-AGAAAC-------CAATCACATTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458588 212 + 32716333 TTATACAACGTGGTAATAAGAAACATGGCAAAGAAATTTAAAAGTGCTTGCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTACACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATAGATTATTT------------CCTTGCC--------CTTATACACTTTTTCACTTGACAGGCAGAAACCTAGTTTTCATTTTATTAAATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413608 212 - 185818997 TTATACAATGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATACTCCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238176 212 - 192294377 TTATACAATGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATACTCCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8718850 212 + 9440265 TTATACAATGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATACTCCCTAAAAATTCATTTAGCTCTATCTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448537 212 + 21915920 TTATACAATGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023398 212 - 90373283 TTATACAGTGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTACACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAACG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2202805 212 + 4234846 TTATACAATGTTATAATAAGAAACATGGCAAAGACATTTAAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATACTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTCATACATTATTT------------CCTTGCC--------CTTATGCACTTTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAATG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 206804 212 - 13750039 TTATACAATGTTATAATAAGAAACATGGCAAAGAAATTTGAAAGTGCTTTCCAAAGTTAAA-AGAAAC-------CAATCACTTTTTTATTATGCTTCCTAAAAATTCATTTAGCTCTATTTGGAAACCCCTACCAGTCTGAAGAGTTATATATTATTT------------CCTTGCC--------CTTATGCACATTTTCACTTGACAGGCAAAAACCTAGTTTTCATTTTATTAAATG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19199747 223 + 47401472 TTATACAATGTTGTAACAAGCAACATGGCAAAGAAACTAAAAAGTTCTTGCCAAAGTTAAA-AGAAAC-------CAACCACG-TTTTACTATACTTCCTAAAAATTCATTTAGCACTATTTGAAAGTCCCTACCAGTCCAAAGATTCATCCACTATTTTCTTGGTGATTCACTTGTC--------TTTATGCACATTTTCACTTGGCAGGCAGAGACCTAATTTTCATTTTATTTAATG i micMur3.chr31 I 78 I 95 s otoGar3.GL873528 20749198 221 - 38779656 TTATACAATGTTGTAACAAGCCACCTGGCAAAGAATCTAAAAAGTTCTTGCTGAAGTTAAA-AGAAAC-------CAACCAC--TTTTATT-TATTTCTTAAAAATTTACATAGCATGATTTGAAAGCCCTTGTCAGTCCAAAGATTCATACATTATTTTCTTAGCAATTTCCTTGTC--------CTTATGCACATTTTTATTTGGCAAGCAGGGACTTAATTTTCATTTTATTGAATG i otoGar3.GL873528 I 2 C 0 s mm10.chr16 78126763 217 + 98207768 ---TCCAGGGTTCTAACAATTGACAAGATGAAGACA-TCAAAAATGCTTGTAAAAGTTAAATATGTATGTTGTTGTGATTGTTGCTGTTTTATTCATCCT-AAATTTCATTTAGCTATTTTCAGAAGCTTCTACCAGCCTGAAAACTCATACATTATTT------------CAAGGCTGATTCTAATTTACACACACTATCATTTGACAGGCAGAAATGTACTTTTCATTTCAT------ i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=579878.000000 s hg38.chr21_KI270874v1_alt 85446 90 + 166743 AAAATGAATACTCAGCAATACCTATCGT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTGATGACACTGAGGCATG s panTro5.chr21 3709910 90 + 33445071 AAAATGAATACTTAGCAATACCTATCGT---TTTTATTTAAATTTTTAGAATACCAAACATCAAATAAC--AACTTCTGATGACACTGAGGCATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336821 90 + 46275980 AAAATGAATACTCAGCAATACCTATCGT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTGATGACACTGAGGCATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3275920 90 - 13858734 AAAATGAATACTCAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTGATGACACTGAGGCATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458800 90 + 32716333 AAAATGAATACTCAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTGATGACACTGAGGCACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413820 90 - 185818997 AAAATGAATACTGAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTAATAACACTGAGGCAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238388 90 - 192294377 AAAATGAATACTGAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTAACAACACTGAGGCAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719062 90 + 9440265 AAAATGAATACTGAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTAATAACACTGAGGCAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448749 90 + 21915920 AAAATGAATACTGAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTAATAACACTGAGGCAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023610 90 - 90373283 AAAATGAATACTGAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCACATAAC--AACTTCTAATAACACTGAGGCAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203017 90 + 4234846 AAAATGAATACTGAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTAATAACACTGAGGCAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207016 90 - 13750039 AAAATGAATACTCAGCAATACCTATCAT---TTTTATTTATATTTTTAGAATACCAAACATCAAATAAC--AACTTCTAATAACACTGAGGCAAA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20749419 84 - 38779656 ------GATACTCAACAATACTCAACATCTATCTTTTTTAATTTTTTTTAATACTAATCATAATTT-----GCCTTCTAATAGCAATGGGTCACA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78126980 87 + 98207768 ----TGATTATCCAATAATTCATATC-T---TTTTATTTATATGTTTGTAATGCCAATCATCTAATAACGTGCCTTCCAGCAGCACTGAAGCATG i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19199970 95 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=66185.000000 s hg38.chr21_KI270874v1_alt 85536 9 + 166743 ATTAATCAT s panTro5.chr21 3710000 9 + 33445071 ATTAATCAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336911 9 + 46275980 ATTAATCAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276010 9 - 13858734 ATTAATCAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458890 9 + 32716333 ATTAATCAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413910 9 - 185818997 ATTAGTCAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238478 9 - 192294377 ATTAGTCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719152 9 + 9440265 ATTAGTCAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448839 9 + 21915920 ATTAGTCAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023700 9 - 90373283 ATTAGTCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203107 9 + 4234846 ATTAGTCAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207106 9 - 13750039 ATTAGTCAT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19200065 9 + 47401472 ATTAATCAT i micMur3.chr31 I 95 C 0 s otoGar3.GL873528 20749503 9 - 38779656 GTTAATCAT i otoGar3.GL873528 C 0 I 5 s mm10.chr16 78127067 7 + 98207768 ACTGATC-- i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=27012.000000 s hg38.chr21_KI270874v1_alt 85545 5 + 166743 TATTA s panTro5.chr21 3710009 5 + 33445071 TATTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336920 5 + 46275980 TATTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276019 5 - 13858734 TATTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458899 5 + 32716333 TATTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413919 5 - 185818997 TATTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238487 5 - 192294377 TATTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719161 5 + 9440265 TATTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448848 5 + 21915920 TATTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023709 5 - 90373283 TATTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203116 5 + 4234846 TATTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207115 5 - 13750039 TATTC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19200074 5 + 47401472 TATTG i micMur3.chr31 C 0 C 0 s mm10.chr16 78127074 5 + 98207768 TGTCA i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e otoGar3.GL873528 20749512 5 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=369911.000000 s hg38.chr21_KI270874v1_alt 85550 56 + 166743 TAACTCTATTGTGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--TAGCAGA s panTro5.chr21 3710014 56 + 33445071 TAACTCTATTGTGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--TAGCAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336925 56 + 46275980 TAACTCTATTGTGCCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--TAGCAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276024 56 - 13858734 TAACTCTATTGTGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--TAGCAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458904 56 + 32716333 TAACTCTATTGTGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTT--TAGCAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413924 56 - 185818997 TAACTGTATTGCATCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--CAGCAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238492 56 - 192294377 TAACTGTATTGCGTCATCTCTGCAAATACTTTTCATTTGTCTTCATTTG--CAGCAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719166 56 + 9440265 TAACTGTATTGCGTCATCTCTGCAAATACTTTTCATTTATCTTCATTTG--CAGCAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448853 56 + 21915920 TAACTGTATTGCGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--CAGCAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023714 56 - 90373283 TAACTGTATTGCGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--CAGCAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203121 56 + 4234846 TAACTGTATTGCGTCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--CAGCAGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207120 56 - 13750039 TAACTGTATTGCATCATCTCTGCAAATACTTTTCATTTGTCTTTATTTG--CAGCAGA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19200079 56 + 47401472 TAACACTATTGTATGATCTTTGCAAAAACCTTCCATTTGGCTTTATTTG--TAACAGA i micMur3.chr31 C 0 I 133 s otoGar3.GL873528 20749517 58 - 38779656 TAACACTACTGTGTGGTCTTTACAAAAACTTTTCATTTGGCTTTATATGTATAACAGA i otoGar3.GL873528 I 5 C 0 s mm10.chr16 78127079 6 + 98207768 TAACAC---------------------------------------------------- i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=17844.000000 s hg38.chr21_KI270874v1_alt 85606 3 + 166743 TGA s panTro5.chr21 3710070 3 + 33445071 TGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336981 3 + 46275980 TGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276080 3 - 13858734 TGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458960 3 + 32716333 TGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413980 3 - 185818997 TGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238548 3 - 192294377 TGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719222 3 + 9440265 TGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448909 3 + 21915920 TGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023770 3 - 90373283 TGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203177 3 + 4234846 TGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207176 3 - 13750039 TGA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20749575 2 - 38779656 -CA i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19200135 133 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I e mm10.chr16 78127085 0 + 98207768 C a score=1570512.000000 s hg38.chr21_KI270874v1_alt 85609 322 + 166743 GGACTGCTCC----------ttttttt-----tttttt--ttttttttttt--ttacagagtctcacactgtctcccaggctggagtgcaatggcagtgatctcg-----gctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggca-cctgccactacacctggctaatttttttgtatttttggtagagagagggtttcactatgttggccaggctgatctcgaactcctgaccttgtgatccactcacctcagcatcctgaagtgctgggattacagccatgagccaccacacccggccTGATGA s panTro5.chr21 3710073 331 + 33445071 GGACTGCTCCttttttttttttttttt-----tttttt--ttttttttttt--ttacagagtctcacactgtctcccaggctggagtgcaatggcagtgatctcg-----gctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggca-cctgccactacacctggctaa-ttttttgtatttttggtagagagagggtttcactatgttggccaggctggtctcgaactcctgaccttgtgatccactcgcctcagcatcctgaagtgctgggattacagccatgagccaccacacccggccTGATGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17336984 311 + 46275980 GGACTGCTCC----------ttttttt-----tttttt--ttact------------agagtctcacactgtctcccaggctggagtgcaatggcagtgatctcg-----gctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggca-cctgccactacacctggctaa-ttttttgtatttttggtagagagagggtttcactatgttggccaggctggtctcgaactcctgaccttgtgatccactcgcctcagcatcctgaagtgctgggattacagccatgagccaccacacccagccTGATGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276083 315 - 13858734 GGACTGTTCC----------ttttttt-----tttttt--ttttt--------taacagagtctcacactgtctcccagactggagtgcaatggcagtgatctcg-----gctcactgcaacctccacctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggca-cctgccactacacctgactaa-ttttttgtatttttagtagagagagggtttcactatgttggccaggctggtctcgaactcctgaccttgtgatccactcgcctcagcgtcctaaagtgctggggttacagccatgagccactgcacccggccTGATGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4458963 309 + 32716333 GGACTGTTCC----------ttttttt-----ttttt----------------ccacagagtctcacactatctcccaggctggagcgcagtggcagtgatctcg-----gctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcttcctgagtagctgggattacaggca-cccgctactacacctggctga-ttttttgtgtttttagtagagagagggtttcactatgttggccagactggtcttaaactcctgaccttgtgatccactcgcctcagcgtcctaaagtgctgggattacagccatgagccaccgcacccggccTGATGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155413983 326 - 185818997 GGACTGTTCC-----------tttttt-----tttatt--tttttatttttggagacagagtctcacactgtctcctgggctgaagtgcaatggcaatgatctcggctcggctcactgcaacctccgcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggca-cccaccactgcacctggctaa-ttttttatatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctgggattatagccgtgagccaccacacccagccTGATGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238551 327 - 192294377 GGACTGTTCC----------ttttttt-----tttatt--tttttatttttggagacagagtctcacactgtctcctgggctgaagtgcaatggcaatgatcttggcttggctcactgcaacctctgcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggca-cccaccactgcacctggctaa-ttttttatatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctgggattatagctgtgagccaccacacccagccTGATGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719225 326 + 9440265 GGACTGTTCC-----------tttttt-----tttatt--tttttatttttggagacagagtctcacactgtctcctgggctgaagggcaatggcaatgatctcggctcggctcactgcaacctccgcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggca-cccaccactgcacctggctaa-ttttttatatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctgggattgtagccgtgagccaccacacccagccTGATGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8448912 327 + 21915920 GGACTGTTCC----------ttttttt-----tttatt--tttttatttttggagacagagtctcacactgtctcccgggctgaagtgcaatggcaatgatctcggctcggctcactgcaacctccacctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggca-cccaccactgcacctggctaa-ttttttgtatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctgggattatagccgtgagctaccacacccagccTGATGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15023773 335 - 90373283 GGACTGTTCC----------TTtttttatttatttatttatttttttttttggagacagagtctcacactgtctcccgggctgaagtgcgatggcaatgatctcggctcagctcactgcaacctcagcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggcaccccaccactgcacctggctaa-ttttttgtatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcacctcagtgtcctaaagtgctgggattatagccgtgagccaccacacccagccTGATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203180 327 + 4234846 GGACTGTTCC----------ttttttt-----tttatt--tttttatttttggagacagagtctcacactgtctcccgggctgaagtgcaatggcaatgatctcggctcggctcactgcaacctccgcctcccaggttcaagcaattatcctgcctcagcctcctgagtagctggga-tacaggca-cccaccactgcacctggctaa-ttttttgtatttttagtagagacagggtttcactatgttggccaggctggtctgaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctgggattatagccgtgagccaccacacccagccTGATGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207179 324 - 13750039 GGACTGttct----------ttttttt---------tt--tttttttttttgacggcaaggttctccactgtctcccgggctggagtgcaacggcaatgatctcggcttggctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggca-cccaccactacacctggctaa-ttttttgtatttttggtacacacaggggttcactatgttggccaggctggtctcaaactcctgacctcatgatctgctcgcctcagtgtcctaaagtgctaggattatagccgtgagccaccacacccagccTGATGA i colAng1.NW_012120598v1 C 0 C 0 s mm10.chr16 78127085 71 + 98207768 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTACACAGTCTTGCT----------TTACTCTCCGTGGGTAAGGCTG--------------------TGATCATTCAGAACCAGCATT----ACTGCTGGAAT--------------------------------- i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19200135 133 + 47401472 I e otoGar3.GL873528 20749577 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=846157.000000 s hg38.chr21_KI270874v1_alt 85931 133 + 166743 GGACTGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTTAGTAATGGAATGAGCTGGTAAAATGCTTAACAACTTTTTGCTAATAGTACAATAAAAAGAATTTTTAAATGAA--------- s panTro5.chr21 3710404 133 + 33445071 GGACTGTTTTCATTTCAAAAACAACTATTCAATTCAACTTATTCAATAAAAAGTGAATTCAGTAATGGAATGAGCTGGTAAAATGCTTAATAACTTTTTGCTAATAGTACAATAAAAAGAATTTTTAAATGAA--------- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337295 133 + 46275980 GGACTGTTTTCATTTCAAAAACAACTATTCAATTCAACTTATTCAATAAAAAGTGAATTCAGTAATGGAATGAGCTGGTAAAATGCTTAATAACTTTTTGCTAATAGTACAATAAAAAGAATTTTTAAATGAA--------- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276398 132 - 13858734 GGACTGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATGGAATGAGCTGGTAAAATGCTTAATAAA-TTTTGTTAACAGTACAATAAAAAGAATTTTTAAACGAA--------- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459272 133 + 32716333 GGACTGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATGGAATGAGCTGGTAAAATGCTTAATAAGTTTTTGCTAATAGTACAATAAAAAGAATTTTTAAATGAA--------- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414309 133 - 185818997 GGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAATAGTAAAATAAAAAGAATTTTTAAATGAA--------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162238878 133 - 192294377 GGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTTATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAATAGTAAAATAAAAAGAATTTTTAAATGAA--------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719551 133 + 9440265 GGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAATAGTAAAATAAAAAGAATTTTTAAATGAA--------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449239 133 + 21915920 GGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAATAGTAGAATAAAAGGAATTTTTAAATGAA--------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024108 133 - 90373283 GGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAACAGTAGAATAAAAAGAATTTTTAAATGAA--------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203507 133 + 4234846 GGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCCGATAAAATGCTTAATAAGTTTTTGCTAATAGTAGGATAAAAAGAATTTTTAAATGAA--------- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207503 133 - 13750039 GGAATGTTTTCATTTCAAAAACAACTATTCAATTCAACTTCTTCAATAAAAAGTGAATTCAGTAATAGAATGAGCTGATAAAATGCTTAATAAGTTTTTTCTAATAGTAGAATAAAAAGAATTTTTAAATGAA--------- i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20749577 130 - 38779656 GGACTGTTATCATTTC-AAACCAACCATTCCATTTAACTCCTTCAATAAAAAGTTAA-TCAGTGGTAGAGTAAACCAGCAAAATGCCTAATAAG-ATTTGATAATAGCAGAAAAAGAAGGAATTAAAAGTGGG--------- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78127156 109 + 98207768 ---------------------------TTTAACTGGACCTCTTTAGTTAGAAGTCACTTCAGTAATAGAGC-AACTGGTGAGACACTTAATGCC-TTTTGGTAATAGCAAAAGGAAAGGAA----AGAACAAAAAGTAGTGG i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19200135 133 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=480858.000000 s hg38.chr21_KI270874v1_alt 86064 59 + 166743 CTATTATTTGAGCCAGAATAGCCCAAATATCCCCTAAATGACCATAACTTTTCACTTTT s panTro5.chr21 3710537 59 + 33445071 CTATTATTTGAGCCAGAATAGCCCAAATATCCCCTAAATGACCATAACTTTTCACTTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337428 59 + 46275980 CTATTATTTGAGCCAGAATAGCCCAAATATCCCCTAAATGACCATAACTTTTCACTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276530 59 - 13858734 CTATTATTTGAGCCAGAACAGCCCAAATATCCCCTAAATGACCATAACTTTTCACTTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459405 59 + 32716333 CTATTATTTGAGCCAGAACAGCCTACATATCCCCTAAATGACCATAACTTTTCACTTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414442 59 - 185818997 CTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239011 59 - 192294377 CTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719684 59 + 9440265 CTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449372 59 + 21915920 CTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCGTAACTTTTCACTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024241 59 - 90373283 CTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203640 59 + 4234846 CTATTATTTGAGCCGGGATAGCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207636 59 - 13750039 CTATTATTTGAGCCAGGATATCCCAAATACCCCCTAAATGACCATAACTTTTCACTTTT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19200268 59 + 47401472 CTATTGTTTGAGCCAGGATAACCAAAATATCCCCTGGATGACCACAACTTTTCACTTTT i micMur3.chr31 I 133 I 6 s otoGar3.GL873528 20749707 58 - 38779656 -TTTTGTTTGAGTTAGAATATCCTAAATATTCCCTGGATGACCACAGCTTTTCATTTTT i otoGar3.GL873528 C 0 I 12 s mm10.chr16 78127265 59 + 98207768 CTCTTGTTGAGGTCAAGATGGCTCAAAGAGCCCCTAGATGACTATGACTCTACATTTTC i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=69469.000000 s hg38.chr21_KI270874v1_alt 86123 15 + 166743 ---TTATA-----------------------------------------------------TTGATTTGTT s panTro5.chr21 3710596 15 + 33445071 ---TTATA-----------------------------------------------------TTGTTTTGTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337487 15 + 46275980 ---TTATA-----------------------------------------------------TTGTTTTGTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276589 15 - 13858734 ---TTATA-----------------------------------------------------TTGTTTTGTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459464 15 + 32716333 ---TTATG-----------------------------------------------------TTGTTTTGTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414501 15 - 185818997 ---TTATA-----------------------------------------------------TTGTGTTGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239070 15 - 192294377 ---TTATA-----------------------------------------------------TTGTGTTGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719743 15 + 9440265 ---TTATA-----------------------------------------------------TTGTGTTGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449431 15 + 21915920 ---TTATA-----------------------------------------------------TTGTGTTGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024300 15 - 90373283 ---TTATA-----------------------------------------------------TTGTATTGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203699 15 + 4234846 ---TTATA-----------------------------------------------------TTGTGTTATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207695 15 - 13750039 ---TTATA-----------------------------------------------------TTGTGTTGTT i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20749777 68 - 38779656 ---TTACACACGTTAATCTGATTGACATAGAAGAAATTTAGTTTAGCTCTGCTTTAGCATTTTGttttgtt i otoGar3.GL873528 I 12 I 115 s mm10.chr16 78127324 16 + 98207768 CAATTATG-------------------------------------------------------ATTTTGTT i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19200327 6 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=39637.000000 s hg38.chr21_KI270874v1_alt 86138 5 + 166743 ATAGG s panTro5.chr21 3710611 5 + 33445071 ATAGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337502 5 + 46275980 ATAGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276604 5 - 13858734 ATAGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459479 5 + 32716333 ATAGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414516 5 - 185818997 ATAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239085 5 - 192294377 ATAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719758 5 + 9440265 ATAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449446 5 + 21915920 ATAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024315 5 - 90373283 ATAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203714 5 + 4234846 ATAGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207710 5 - 13750039 ATAGG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20749960 5 - 38779656 atagg i otoGar3.GL873528 I 115 I 45 s mm10.chr16 78127340 5 + 98207768 ATAAA i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e micMur3.chr31 19200327 6 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=470774.000000 s hg38.chr21_KI270874v1_alt 86143 64 + 166743 ACAGATCAGCACCTTATAAAATGCTGTCCCACAGAACGATGTTCCATGATTGTTAATAGTTATA s panTro5.chr21 3710616 64 + 33445071 ACAGATCAGCACCTTATAAAATGCTGTCCCACAGAACGATGCTCCATGAATGTTAATAGTTATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337507 64 + 46275980 ACAGATCAGCACCTTATAAAATGCTGTCCCACAGAACGATGCTCCATGAATGTTAATAGTTATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276609 64 - 13858734 ACAGATCAGCACCTTATAAAATGCTGTCCCACAGAACGATGCTCCATGAATGTTAATAGTTATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459484 64 + 32716333 ACAGATCAGCATCTTATAAAATGCTGTCCCACAGAACAATGCTCCATGAATGTTAATAGTTATA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414521 64 - 185818997 ACAGATCAGCACATTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239090 64 - 192294377 ACAGATCAGCACATTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719763 64 + 9440265 ACAGATCAGCACATTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449451 64 + 21915920 ACAGATCCGCACATTATAAAATGCTATTACACAGAATAATGCTCCATGAATGTTAATGGTTATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024320 64 - 90373283 ACAGATCAGCACATTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203719 64 + 4234846 ACAGATCAGCACATTATAAAATGCTGTTACACAGAACAATGCTCCATGAATGTTAATGGTTATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207715 64 - 13750039 ACAGATCAGCATGTTATAAAATGCTGTTACACAGAACAATGTTCCAGGAATGTTAATGGTTATA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19200333 64 + 47401472 ACAGATCAGCACCTTATAAACTGTTTTTCCACAATACACTGTTCCACAAATGGTAATAGTTACA i micMur3.chr31 I 6 C 0 s otoGar3.GL873528 20750010 63 - 38779656 ACAGATCGGTACCTTATAAATTGTTATCCCACAGAACAC-ATTCTACAAATGGTAATAGTTATG i otoGar3.GL873528 I 45 C 0 s mm10.chr16 78127345 62 + 98207768 ACTGATGAGCACTTTATCAGCTGCTGTTCTATAGAACATT--CTCAAAGATGTTTATAGTTATT i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13825182 3116 + 39895921 I a score=146402.000000 s hg38.chr21_KI270874v1_alt 86207 21 + 166743 AGAACAAAAGGGTGGG-AAAGG s panTro5.chr21 3710680 21 + 33445071 AGAACAAAAGGGTGGG-AAAGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337571 21 + 46275980 AGAACAAAAGGGTGGG-AAAGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276673 21 - 13858734 AGAACAAAAGGGTGGG-AAAGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459548 22 + 32716333 AGAATAAAAGGGTGGGAAAAGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414585 22 - 185818997 AGAACAAAATGGTGGGAAAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239154 22 - 192294377 AGAACAAAATGGTGGGAAAAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719827 22 + 9440265 AGAACAAAATGGTGGGAAAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449515 22 + 21915920 AGAACAAAATGGTGGGAAAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024384 22 - 90373283 AGAACAAAATGGTGGGAAAAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203783 22 + 4234846 AGAACAAAATGGTGGGAAAAGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207779 22 - 13750039 AGAACAAAAGGGTGGGAAAAGG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19200397 21 + 47401472 ATAGCAAAAGTGGGGG-AAAGG i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20750073 19 - 38779656 ATAACAAAAGAGGGG---AAGG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78127407 20 + 98207768 -GAATAAAACAGAGGG-AAAGG i mm10.chr16 C 0 C 0 s canFam3.chr31 13828298 21 + 39895921 AAAACAAAAAAAGGGG-CAAAA i canFam3.chr31 I 3116 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597446 63 - 6883506 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=1237165.000000 s hg38.chr21_KI270874v1_alt 86228 174 + 166743 GAACATTTAATGTATAAATGTTCATTAAGAAACTTCGA------AACAATGTACAGGATGAATCTTTTCAC---TTT-TTTTCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGCATG-----------CAAACTTAATCATGAATAGCTATGAAACAATGATTCTCCTT s panTro5.chr21 3710701 175 + 33445071 AAACATTTAATGTATAAATGTTCATTATGAAACTTCGA------AACAATGTACAGGATGAATCATTTCAC--TTTT-TTTTCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGCATG-----------CAAACTTAATCATGAATAGCTACGAAACAATGATTCTCCTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337592 175 + 46275980 AAACATTTAATGTATAAATGTTCATTATGAAACTTCGA------AACAATGTACAGGATGAATCATTTCAC--TTTT-TTTTCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGCATG-----------CAAACTTAATCATGAATAGCTACGAAACAATGATTCTCCTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276694 175 - 13858734 GAACATTTAATGTATAAATGTTCATTATGAAACTTCAA------AACAATGTACAGGATGAATCATTTCAC--TTTT-TTTTCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGCATG-----------CAAACTTAATCATGAATAGCTATGAAACAATGATTCTCCTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459570 175 + 32716333 GAACATTTAATGTATAAATGTTCATTATGAAACTTCAA------AACAATGTACAGGATGAATCATTTCAC--TTTT-TTTTCCCTTTGTCCTACTAGTCAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCGGCATG-----------CAAACTTAATCATGAATAGCTATGAAACAAGGATTCTCCTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414607 168 - 185818997 GAACATTTAATGTGTAACTCTTCATTCTGAAACTTCAA------AACAATGTATGGGAGGAATCATTTCACTTTTTT-TTCCCCCTTTGTCCTCCTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGCTATGAAACAA---------TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239176 167 - 192294377 GAACATTTAATGTGTAACTCTTCATTCTGAAACTTCAA------AACAATGTATGGGATGAATCATTTCAC-TTTTT-TTCCCCCTTTGTCCTACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAATTTAATCATGAATAGCTATGAAACAA---------TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8719849 167 + 9440265 GAACATTTAATGTGCAACTCTTCATTCTGAAACTTCAA------AACAATGTATGGGATGAATCATTTCAC-TTTTT-TTCCCCCTTTGTCCTACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGCTATGAAACAA---------TT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449537 166 + 21915920 GAACATTTAATGTGTAACTCTTCATTATGAAACTTCAA------AACAATGTATGGGATGAATCATTTCAC--TTTT-TTTCCCCTTTGTCCTACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGCTATGAAACAA---------TT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024406 166 - 90373283 GAACATTTAATGTGTAACTCTTCATTATGAAACTTCAA------AACAATGTATAAGATGCATCATTTCAC--TTTT-TTTCCCCTTTGTCCTACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGCTATGAAACAA---------TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203805 166 + 4234846 GAACATTTAATGTGTAACTCTTCATTATGAAACTTCAA------AACAATGTATGGGATGAATCATTTCAC--TTTT-TTTCCCCTTTGTCCTACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGCTATGAAACAA---------TA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207801 166 - 13750039 GAACATTTAATGTGTAAATGTTCATTATGAAACTTCAA------AACAATGTACGGGATGAATCATTTCAC--TTTT-TTTTCCCTTTGTCCTACTAGTTAGCATTCTCTGGTATTCTAGAAATCACCAGAAAGACCAGTATG-----------CAAACTTAATCATGAATAGCTATGAAACAA---------TT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19200418 174 + 47401472 GGTCATTTAATGTGTAAATGTGCATTATGAAACT--AA------AACTACACACAGAATGAGTCACTTCAC--TTTTGTTCCCCACTCGGCCCACTAGTTAGCTTTTGCTGGTATTCTAGAAATAACCAGAAAGACTTGTATT-----------CAACCTTAATTATAAATACCTATGAAATAAAGATTCTCCTT i micMur3.chr31 C 0 I 335 s otoGar3.GL873528 20750092 158 - 38779656 GGTCATTTAATGTATAAATGTGCATTATTAAACT--AA------AATTACATATAGAATGAGTTGCTTCAG--TTTT-TTCCTACCTTGGCCCTCTAGTTAGC---------------ATAAATACCCAGAAAGACTAGTATT-----------CAACTTTAATTATAAATAGCTATGAAATAATGATTCTCCTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78127427 130 + 98207768 GGTCTTGAAATGTA--------AATTATGAA--CTCAA------AATAG--------------CACTTCAT--TGAC-TCCC------------ATAGCTAGTGTTTATTATTATTCTAAAAA---CCAAAAAGATCAATATTTTATTATGAACCTACTTTAAATATGAATAGCTATG----------------- i mm10.chr16 C 0 C 0 s canFam3.chr31 13828319 156 + 39895921 GGGCATTTAGTGTGTA------CATTATAAAACTCCAAAAAGGTAACAGTACACAGGATGTATCATTTCTC--TCTT-TTTTCCCTTAAGCC-AGTAGTTAACATATCCTGATATT----------CCAGAAAGACCACtatt-----------taatattaattataaa----tacagaacaaaaatatt---- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3597509 153 - 6883506 gggcttttgatgtataaatgtgcactaagaaactacaa------aactgtacacaggattcatcgtttcAC--TTTT-TT---CCTTTGCTCC-CTTGTTAGCATCTCCTGTTATTCCAGAAT------------------TG-----------CAACCTCAATTATGAATACTTATAGAATGCTGGTTCTTTTT i dasNov3.JH568778 I 63 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=622825.000000 s hg38.chr21_KI270874v1_alt 86402 78 + 166743 TTTAAAATCCTTAGAATAATGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTATC s panTro5.chr21 3710876 78 + 33445071 TTTAAAATCCTTAGAATAATGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTATC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337767 78 + 46275980 TTTAAAATCCTTAGAATAATGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTATC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276869 78 - 13858734 TTTAAAATCCTTAGAATAATGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAATGTTATC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459745 79 + 32716333 TTTAAAACCCTTGGAATAATGCAACTTAGAATGAATTTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTATC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414775 78 - 185818997 TTTAAAATCCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTACC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239343 78 - 192294377 TTTAAAAACCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTACC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720016 78 + 9440265 TTTAAAAACCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTACC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449703 78 + 21915920 TTTAAAATCCTTAAAATAGCGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTACC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024572 78 - 90373283 TTTAAAATCCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2203971 78 + 4234846 TTTAAAATCCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAACGTTACC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 207967 78 - 13750039 TTTAAAATCCTTAAAATAGTGCAACTTAGAATGAA-TTATCTTCAGCATTATGAGGA--ACATTGTTTTTTAAATGTTACC i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20750250 77 - 38779656 TCAAAAAAGATTGGAAAAATGCAACTTAGAATAAA-CTATACCCAGAACTATGAGAA--ATACT-TTTTTTAAAATTTATC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78127557 74 + 98207768 ---GAAATATTTAGAATAATGTGACACAGAGTGAA-AGTTTCCCAGC-TAATGTGAA--ATGCTATTTTTTTGATGTTTTC i mm10.chr16 C 0 I 2221 s canFam3.chr31 13828475 75 + 39895921 tttaaaaatcttagaataatataaCCTAGAATGAA-TTATCCCTAGCATTATGAGAA--AAACT---TTTTAAAAATTGTA i canFam3.chr31 C 0 I 2 s dasNov3.JH568778 3597662 80 - 6883506 TAAAAAATCATTAGAATAATATAACATGGAATGAA-CTATTCCTAGCATTATGAGGAATATATTTTTGTTTTAATTTTATC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19200592 335 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=238323.000000 s hg38.chr21_KI270874v1_alt 86480 29 + 166743 AACCTTAATGGATGTAAC-AAGTAGAAATG s panTro5.chr21 3710954 29 + 33445071 AACCTTAATGGATGTAAC-AAGTAGAAATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337845 29 + 46275980 AACCTTAATGGATGTAAC-AAGTAGAAATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276947 29 - 13858734 AACCTTAATAGATGTAAC-AAGTAGAAATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459824 29 + 32716333 AACCTTAATGGATGTAAC-AAATAGAAATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414853 29 - 185818997 AACCTTAATGGATGTAAC-AAGTAGAAATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239421 29 - 192294377 AACCTTAATGGATGTAAC-AAGTAGAAATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720094 29 + 9440265 AACCTTAATGGATGTAAC-AAGTAGAAATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449781 29 + 21915920 AACCTTAATGGATGTAAC-AAGTAGAAATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024650 29 - 90373283 AACCTTAATGGATGTAAC-AAGTAGAAATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204049 29 + 4234846 AACCTTAATGGATGTAAC-AAGTAGAAATG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208045 29 - 13750039 AATCTTAATGGATGTAAA-AAGTAGAAATG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20750327 30 - 38779656 AACATTAATGAATATAACAAAGTAGAAATG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13828552 23 + 39895921 AAGCTTAATAGATGTAAC-------AAATG i canFam3.chr31 I 2 C 0 s dasNov3.JH568778 3597742 29 - 6883506 AATCTTAAAGGATGTAAC-AGGTAGAAATG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19200592 335 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78127631 2221 + 98207768 I a score=101290.000000 s hg38.chr21_KI270874v1_alt 86509 14 + 166743 TTTCTATACATATA s panTro5.chr21 3710983 14 + 33445071 TTTCTATACATATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337874 14 + 46275980 TTTCTATACATATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276976 14 - 13858734 TTTCTATACATATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459853 14 + 32716333 TTTCTATAAGTATA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414882 14 - 185818997 TTTCTATACATATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239450 14 - 192294377 TTTCTATACATATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720123 14 + 9440265 TTTCTATACATATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449810 14 + 21915920 TTTCTATACATATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024679 14 - 90373283 TTTCTATACATATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204078 14 + 4234846 TTTCTATACATATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208074 14 - 13750039 TTTCTATACATGTA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20750357 14 - 38779656 TTTCTACACACACA i otoGar3.GL873528 C 0 I 501 s canFam3.chr31 13828575 14 + 39895921 TTTCTAAACATGTG i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19200592 335 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78127631 2221 + 98207768 I a score=483955.000000 s hg38.chr21_KI270874v1_alt 86523 85 + 166743 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTGTGTGACC---TAATTTTCAAAATATCTGCTTTCTGTCTACCTTTCCCAAC s panTro5.chr21 3710997 85 + 33445071 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTGTGTGACC---TAATTTTCAAAATATCTGCTTTCTGCCTACCTTTCCCAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337888 85 + 46275980 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTGTGTGACC---TAATTTTCAAAATATCTGCTTTCTGTCTACCTTTCCCAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3276990 84 - 13858734 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTGTGTGACC---TAATTTTCAAAATA-CTCCTTTCTGTCTACCTTTCCCAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459867 85 + 32716333 AGTCTCTTGTTAAAATTCTCTTTTAAAAAAAATCACTGTGTGCCC---TAATTTTCAAAATATCTGCTTTCTGTCTACCTTTCCCAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414896 83 - 185818997 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAAAC--CTGCTTTCTGTCTACCTTTCCCAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239464 83 - 192294377 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAAAC--CTGCTTTCTGTCTACCTTTCCCAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720137 83 + 9440265 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAAAC--CTGCTTTCTGTCTACCTTTCCCAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449824 83 + 21915920 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAAAC--CTGCTTTCTGTCTACCTTTCCCAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024693 70 - 90373283 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAAAC--CTG----CTGTCTACC--------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204092 83 + 4234846 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAAAC--CTGCTTTCTGTCTACCTTTCCCAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208088 83 - 13750039 AGTCTCTTGTTAAAATTCTCTTTTTAAAAAAATCACTATGTGACC---TAATTTTCAAAAT--CTGCTTTCTGTCTACCTTTCCCAAC i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13828589 70 + 39895921 AATCTC----------------TTTAAAAATATGACTGCTTGACCTGTTGATTTTCAAAAT--CTGTTTCCTGTCTACCTTTCCGAAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19200592 335 + 47401472 I e otoGar3.GL873528 20750371 501 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78127631 2221 + 98207768 I a score=180325.000000 s hg38.chr21_KI270874v1_alt 86608 27 + 166743 CTACTATTTCCCAT-TCAGCAAAACCAT s panTro5.chr21 3711082 27 + 33445071 CTACTATTTCCCAT-TCAGCAAAACCAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17337973 27 + 46275980 CTACTATTTCCCAT-TCAGCAAAACCAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277074 27 - 13858734 CTACTATTTCCCAT-TCAGCAAAACCAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459952 27 + 32716333 CTACTATTTCCCAT-TCAGCAAAACCAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155414979 27 - 185818997 CTACTATTTCCCAT-TCAGCAAAACTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239547 27 - 192294377 CTACTATTTCCCAT-TCAGCAAAACTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720220 27 + 9440265 CTACTATTTCCCAT-TCAGCAAAACTAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449907 27 + 21915920 CTACTATTTCCCAT-TCAGCAAAACTAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024763 21 - 90373283 ------TTTCCCAT-TCAGCAAAACTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204175 27 + 4234846 CTACTATTTCCCAT-TCAGCAAAACTAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208171 27 - 13750039 CTACTATTTCCCAT-TCAGCAAAACCAT i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20750872 27 - 38779656 CTTCTATTTTTCAC-TCAGCAAAGCCAT i otoGar3.GL873528 I 501 C 0 s canFam3.chr31 13828659 28 + 39895921 CTTTTCTTTCCCACATTCCCAAGTCCAC i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19200592 335 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78127631 2221 + 98207768 I a score=453189.000000 s hg38.chr21_KI270874v1_alt 86635 67 + 166743 AAATTTCC-TTTTTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAG---CCCTCATGTGTCA s panTro5.chr21 3711109 67 + 33445071 AAATTTCC-TTTTTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAG---CCCTCATGTGTCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338000 67 + 46275980 AAATTTCC-TTTTTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAG---CCCTCATGTGTCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277101 67 - 13858734 AAATTTCC-TTTTTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAG---CCCTCATGTGTCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4459979 67 + 32716333 AAATTTCC-TTTTTGAGATTTAAGCAAGAGGTTAACTCTTTTGTTAAGCACTGAG---CCCTCAGGTATCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415006 69 - 185818997 AAATTTCC-TTTTTGCgatttaaatgagaggttaactcttttgttaagcactgag-ccccctcaggtgtca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239574 69 - 192294377 AAATTTCC-TTTTTGCgatttaaatgagaggttaactcttttgttaagcactgag-ccccctcaggtgtca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720247 69 + 9440265 AAATTTCC-TTTTTGCgatttaaatgagaggttaactcttttgttaagcactgag-ccccctcaggtgtca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8449934 70 + 21915920 AAATTTCC-TTtttgagatttaaatgagaggttaactcttttgttaagcactgagcccccctcaggtgtca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024784 69 - 90373283 AAATTTCC-TTtttgagatttaaatgagaggttaactcttttgttaagcactgag-ccccctcaggtgtca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204202 69 + 4234846 AAATTTCC-TTTTTGAGATTTAAATGAGAGGTTAACTCTTTTGTTAAGCACTGAG-CCCCCTCAGGTGTCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208198 69 - 13750039 AAATTTCC-TTtttgagatttaaatgagaggttaactcttccgttaagcactgag-cccccttaggtgtca i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20750899 56 - 38779656 AATTTTTTATTTTTAAGACATAAGCAAGAA------------GTTAAGCACTGAA---TTCTCAGATGTCA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78129852 63 + 98207768 AATTTCTC-TTTTTGAGTTTTAAT---GAAGTTAAGAACTTTGTTAGGTCTTGAA----TCTCAAGTGGTC i mm10.chr16 I 2221 I 27 s canFam3.chr31 13828687 67 + 39895921 TAATATAT-TTTTTGAGATTTAAGCAAGAGATTAGCTCTTATGTTAAGGATCGTG---TCCTCAAATGTCA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19200592 335 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=1299208.000000 s hg38.chr21_KI270874v1_alt 86702 177 + 166743 CCCATCCCCTCTTCTGTGTTCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTTTTATCA---CATAGTACTATAATTTGGCA-TGTATTTTTCTGCCGGTTTTACTAGGCCCAAAGAACCTAAGGATCAGAGACAAATtattagtatcagtattagtgttagtgctagcattagtatca s panTro5.chr21 3711176 177 + 33445071 CCCATCCCCTCTTCTGTGTTCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTTTTATCA---CATAGTACTATAATTTGGCA-TGTATTTTTCTGCCGGTTTTACTAGGCCCAAAGAACCTAAGGATCAGAGACAAATtattagtatcagtattagtgttagtgctagcattagtatca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338067 177 + 46275980 CCCATCCCCTCTTCTGTGTTCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTTTTATCA---CATAGCACTATAATTTGGCA-TGTATTTTTCTGCCGGTTTTACTAGGCCCAAAGAACCTAAGGATCAGAGACAAATtattagtatcagtattagtgttagtgctagcattagtatca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277168 177 - 13858734 CCCATCCCCTCTTCTGTGTTCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTTTTATCA---CATAGTACTATAATTTGGCA-TGTATTTTTCTGCCGGTTTTACTAGGCCCAAAGAACCTAAGGATCAGAGACAAATtattagtatcagtattagtgttagtgctagtattagtatca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460046 176 + 32716333 CCCATCCCCTCTTCTGTGTTCCCAGGCCCTCTAGAAACCTACCACTTATTTTCTTTTATCA---CATAGTGCTAT-ATTTGGCA-TTTATCTTTCTGCCGGTTTTACTAGGCCCAAAGAACCTAGGGATCAGAGACAAATtattagtaccagtattagtgttagtgctagtattagtatca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415075 171 - 185818997 cccattccctcttctgtgttcccaggccctctggaaacctactacttattttctttcgtca---catagtactataatttggca-tttatttttctgcctgttttactaggcccagagaacctagggatcagagacaaattattagtatcagtattagta------ttagtattaatatca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239643 171 - 192294377 cccattccctcttctgtgttcccaggccctctggaaacctactacttattttctttcgtca---catagtactataatttggca-tttatttttctgcctgttttactaggcccagagaacctagggatcagagacaaattattagtatcagtattagta------ttagtattaatatca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720316 171 + 9440265 cccattccctcttctgtgttcccaggccctctggaaacctactacttattttctttcgtca---catagtactataatttggca-tttatttttctgcctgttttactaggcccagagaacctagggatcagagacaaattattagtatcagtattagta------ttagtattaatatca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8450004 171 + 21915920 cccattccctcttctatgttcccaggccctctggaaacctaccacttattttctttcgtca---catagtactataatttggca-tttatttttctgcctgttttactaggcccagagaacctagggatcagagacaaattattagtatcagtattagta------ttagtattaatatca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15024853 171 - 90373283 cccattccctcttctgtgttcccaggccctctggaaacctactacttattttctttcgtca---catagtactataatttggca-tttatttttctgcctgttttactaggcccagagaacctagggatcagagacaaattattagtatcagtattagta------ttagtattaatatca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204271 171 + 4234846 CCCATTCCCTCTTCTGTGTCCCCAGGCCCTCTGGAAACCTACTACTTATTTTCTTTCGTCA---CATAGTACTATAATTTGGCA-TTTATTTTTCTGCCTGTTTTACTAGGCCCAGAGAACCTAGGGATCAGAGACAAATtattagtatcagtattagta------ttagtattaatatca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208267 177 - 13750039 cccattccctcttctgtgttcccaggccctctggaaacctaccacttattttcttacatca---catagtactataatttggca-tttatttttctgcctgttttactaggcccagagaacctagggatcagagacaaattattagtatcagtattagtattagtgttagtattagtatca i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19200927 178 + 47401472 CCCACCCTCTCTTTTGTGTTCCCAGGCTCTCTGGAAACCTACCACTTCATTGCCTTTATCA---GATATTACCATAATTGGATATTTTATTTTTCTATCTGTTTTACTAAACCCAGAGAACCTGGGAGTCAGAGACAAATTCTGAGtatcagtattagtatgagcattggtacttatataa i micMur3.chr31 I 335 C 0 s otoGar3.GL873528 20750955 180 - 38779656 CCCACCCTCTCTTCTGTGTTCCAACACTTTCTGAAAACCTAAGACTTCGCTGAATTTATCAAATGGTAGTAGtataattaaata-tttatttttCTGCCTGTTGTACCAGACCCAGACAACCTGGGGATCAGAGACAAATTGTGTGTATCAGTATTAGTGTCAGTGTTAGTGCTCAtgttg i otoGar3.GL873528 C 0 I 836 s mm10.chr16 78129942 146 + 98207768 CCCTCTGCCTCTTCTAT---CCCAAGCAGTATGCTAGCAGACACCTCACTGACAT-CACCA---CCTAGTACTATAAATAGACA-TTTAATTTCCTGCCAACTTTA-TAAGCTC---------------CAGTGACAAATTACTGCTATTGGT-----TA------TCAGCGTTCACATAT i mm10.chr16 I 27 C 0 s canFam3.chr31 13828754 121 + 39895921 --------------------CCCACCCCCTCCGGAAACCCAC-----------------CA---CATAGTTCTATAATTAGACA-TTCATTTTTCCACCTGTTTTACTAGAGCCAGAAA-------GGTTAAAGATATATTCTTAGTATCAGTATTTGTG------TTAGTATTT------ i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=1293345.000000 s hg38.chr21_KI270874v1_alt 86879 162 + 166743 gtattTACAGGCATGgtacctacacgggaacctggaactctccaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTGTCTCCAGAGCCTCCATGTTATCAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGAAAAT s panTro5.chr21 3711353 162 + 33445071 gtattTACAGGCATGgtacctacacgggaacctggaactctccaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTGTCTCTAGAGCCTCCATGTTATCAATGTTTTTGTCGATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGAAAAT i panTro5.chr21 C 0 I 799 s panPan2.chr21 17338244 162 + 46275980 gtattTACAGGCATGgtacctacacgggaacctggaactctccaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTGTCTCTAGAGCCTCCATGTTATCAATGTTTTTGTCGATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGAAAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277345 162 - 13858734 gtattTACAGGCATGgtacctacacgggaacctggaaccctccaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTGTCTCTAGAGCCTCCATGTTATCAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460222 162 + 32716333 gtattTACAGGCATAATAcctatacaggaacctggaattctgcaagcattcaataaatgtgtgttaaataaataaatGAGCAAAAGTGTCTCTAGAGCCTCTGTGTTATCAATGTTTTTGTCTATAATTTAAATCAGGAAGAGAATCAGGTCTGCAGACAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415246 162 - 185818997 gtatttacaggcatggtacctatatgggaacctggaactctgcaagcattcaataaatgtgtttttaataaataaatGAGCAAAAGTGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239814 162 - 192294377 gtatttacaggcatggtacctatatgggaacctggaactctgcaagcattcaataaatgtgtttttaataaataaatGAGCAAAAGTGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720487 162 + 9440265 gtatttacaggcatggtacctatatgggaacctggaactctgcaagcattcaataaatgtgtttttaataaataaatGAGCAAAAGTGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8450175 162 + 21915920 gtatttacaggcatggtacctatatgggaacctggaactctgcaagcattcaataaatgtgtttttaataaataaatGAGCAAAAGTGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15025024 162 - 90373283 gtatttacaggcatggtacctatatgggaacctggaacactgcaagcattcaataaatgtgtttttaacaaataaatGAGCAAAAGTGTCTCTAAAGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204442 162 + 4234846 gcattTACAGGCATGGTACCTATATGGGAacctggaactctgcaagcattcaataaatgtgtttttaataaataaatGAGCAAAAGTGTCTCTAAGGCCTCCACGTTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208444 162 - 13750039 gtatttacaggcatggtatccatatggaaacctggaactctgtaagcattcaataaatgtgtttttaataaataaatGAGCAAAAGTGTCTCTAAAGCCTCCATATTATTAATGTTTTTGTCAATAATTTAAATCAGGAAGAGAATCAGGTCTGTAGACAAT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19201105 150 + 47401472 gtatttagaggcacagc------------tcctagaacatggcatgcattcaataaatgtgtgttaaataaataaatGAGCATAAGTATCAATAAAACTCCCATGTTAATGATGTTTTTGTCAATGATTTAAGTTGGGGAAAGAATCATGCCTGTAGACAAC i micMur3.chr31 C 0 I 1 s otoGar3.GL873528 20751971 145 - 38779656 GTATTTAGAGGCAcggc------------acctggaacatggcatgcactcagtaaatatgtgt----taaataaatgaGCAAAAGTGTTAATAGAACTTCCATGTTAATGCTGTTTTTGTC-ATCATCTAAACTGAGGAAAGAATCAGGCCTATAGACAAT i otoGar3.GL873528 I 836 I 1 s mm10.chr16 78130088 154 + 98207768 ATACTCTGAGGTCCAATAACTGC------ACCTGGAACTCTGTTAGTATTTAGCACATGAGACTTCAT--GATAAACCATCAAAGGTGTCATTAGATTCTCCATGTTATTCATGAATTTGTCAAAAGTTTAAATCAGAATCAAAATCAAACCAAAAGACAGT i mm10.chr16 C 0 C 0 s canFam3.chr31 13828875 160 + 39895921 CTATTTAGAGGTGcaacacctaaatggatgcctggaattctgca-gcattcaataaacatttacaaaatgaataaatGAGCAAGAATATCAATAGAGCCTCCATATTATT-ATGTTTTTGTCAGTGATTTAAATCAGAGACTGAGTTAGGCCTGTAGACAAC i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=3285.000000 s hg38.chr21_KI270874v1_alt 87041 1 + 166743 G s panPan2.chr21 17338406 1 + 46275980 T i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277507 1 - 13858734 T i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460384 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415408 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239976 1 - 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720649 1 + 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8450337 1 + 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15025186 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204604 1 + 4234846 T i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208606 1 - 13750039 T i colAng1.NW_012120598v1 C 0 C 0 s mm10.chr16 78130242 1 + 98207768 C i mm10.chr16 C 0 C 0 s canFam3.chr31 13829035 1 + 39895921 T i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201255 1 + 47401472 I e otoGar3.GL873528 20752116 1 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e panTro5.chr21 3711515 799 + 33445071 I a score=20025.000000 s hg38.chr21_KI270874v1_alt 87042 2 + 166743 TT s panTro5.chr21 3712314 2 + 33445071 tt i panTro5.chr21 I 799 C 0 s panPan2.chr21 17338407 2 + 46275980 TT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277508 2 - 13858734 TT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460385 2 + 32716333 TT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415409 2 - 185818997 TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239977 2 - 192294377 TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720650 2 + 9440265 TT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8450338 2 + 21915920 TT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15025187 2 - 90373283 TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204605 2 + 4234846 TT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208607 2 - 13750039 TT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19201256 2 + 47401472 TT i micMur3.chr31 I 1 C 0 s otoGar3.GL873528 20752117 2 - 38779656 TT i otoGar3.GL873528 I 1 I 710 s mm10.chr16 78130243 1 + 98207768 -T i mm10.chr16 C 0 I 1 s canFam3.chr31 13829036 2 + 39895921 TT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=312701.000000 s hg38.chr21_KI270874v1_alt 87044 39 + 166743 TAAATTGA--TTTTTGCCAGAGAAGTG---------TTTTA-------AGTTAAATT s panTro5.chr21 3712316 39 + 33445071 taaattgA--TTTTTGCCAGAGAAGTG---------TTTTA-------AGTTAAATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338409 39 + 46275980 TAAATTGA--TTTTTGCCAGAGAAGTG---------TTTTA-------AGTTAAATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277510 39 - 13858734 TAAATTGA--TTTTTGCCAGAGAAGTG---------TTTTA-------AGTTAAATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460387 39 + 32716333 TAAATTGC--TTTTTGCAAGAGAAGTG---------TTTTA-------AGTTAAATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415411 39 - 185818997 TAAATTGA--TTTTTGCCAAAGAAGTG---------TTTTA-------AGTTAAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162239979 39 - 192294377 TAAATTGA--TTTTTGCCAAAGAAGTG---------TTTTA-------AGTTAAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720652 39 + 9440265 TAAATTGA--TTTTTGCCAAAGAAGTG---------TTTTA-------AGTTAAATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8450340 39 + 21915920 TAAATTGA--TTTTTGCCAAAGAAGTG---------TTTTA-------AGTTAAATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15025189 39 - 90373283 TAAATTGA--TTTTTGCCAAAGAAGTG---------TTTTA-------AGTTAAATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204607 39 + 4234846 TAAATTGA--TTTTTGCCAAAGAAGTG---------TTTTA-------AGTTAAATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208609 39 - 13750039 TACATTGA--TTTTTGCCAAAGAAGTG---------TTTTA-------AGTTAAATT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19201258 48 + 47401472 TAAATTGGGTTTTTTGCCAGATATACC---------TTTTAATTTTCAAGTTAAATT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20752829 46 - 38779656 taaattGA--TCTTTGTCAAAGATGCA---------TTTTAATTTTTCAGTTAAATT i otoGar3.GL873528 I 710 C 0 s mm10.chr16 78130245 47 + 98207768 TAAACTAA---CTTTGTCAAAAACCGATCACATTATTTTTA-------AGCTAAATT i mm10.chr16 I 1 I 762 s canFam3.chr31 13829038 46 + 39895921 TAAATTAA--TTTTTTCCAGAGAAGCA--TTTTTGTTTTTA-------AGTCAAATT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I a score=1406058.000000 s hg38.chr21_KI270874v1_alt 87083 182 + 166743 GTAATACCTTCAGTTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTTCTTCTATCTGGCAGTTTCAAACTCTACTCTTACCT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGAAAAAATATCCATTACGTTTACAGGTATAAAATGGG s panTro5.chr21 3712355 182 + 33445071 GTAATACCTTCCGGCAAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCAATTTTCTTCTATCTGGCAGTTTCAAACTCTACTCTTACCT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGAAAAAATATCCATTATGTTTACAGGTATAAAATGGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338448 182 + 46275980 GTAATACCTTCAGGTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCAATTTTCTTCTATCTGGCAGTTTCAAACTCTACTCTTACCT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGAAAAAATATCCATTATGTTTACAGGTATAAAATGGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277549 182 - 13858734 GTAATACCTTCAGGTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTTCTTCTATCTGGCAGTTTCAAACTCTACTCTTACCT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGAAAAAATATCCATTATGTTTACAGGTATAAAATGGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460426 182 + 32716333 GTAATACCTTAAGGTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTTCTTCTATCTGGCAGTTTCAAACTCTACTCTTACCT---AGACCCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGAAAAAATATCCATTATGTTTACAGGTATAAAATGGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415450 182 - 185818997 GTAATGCCTTCAGGTGAAGCACGCCTTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCAAACTTTACTCTCACTT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGGAAGAATATCCATTATGTTTACAGGTATAAAATGGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162240018 182 - 192294377 GTAATGCCTTCAGGTGAAGCACGCCTTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCAAACTTTACTCTCACTT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGGAAGAATATCCATTATGTTTACAGGTATAAAATGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720691 182 + 9440265 GTAATGCCTTCAGGTGAAGCACGCCTTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCAAACTTGACTCTCACTT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGGAAGAATATCCATTATGTTTACAGGTATAAAATGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8450379 182 + 21915920 GTAATGCCTTCAGGTGAAGCATGCCTTCCTCTTTCTACAGTCCTGACATC-ACTCTATTCGCTTCTATCTGGCAGCTTCAAACTCTACTCTTACTT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGGAAGAATATCCATTATGTTTACAGGTATAAAATGGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15025228 182 - 90373283 GTAATGCCTTCAGGTGAAGCATGCATTCCTCTTTCAACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCAAACTCTACTCTTACTT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGGAAGACTATCCATTATGTTTACAGGTATAAAATGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204646 182 + 4234846 GTAATGCCTTCAGGTGAAGCATGCATTCCTCTTTCTACAGTCCTGACATC-ACTCTATTTGCTTCTATCTGGCAGCTTCAAACTCTACTCTTACTT---AGACTCTCACAGCAACTGAGTTTTCTACTTCTGGTCTAGATATTACATG-AGGAAGAATATCCATTATGTTTACAGGTATAAAATGGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208648 182 - 13750039 GTAATACCTTCAGATGAAGCATGCATTCCTCTTTCTACAGTCCTGATATC-ACTCTATTTGCTTCTATCTGGCAGTTTCAAACTCTGCTCTTACTT---AGACTCTCACAGCAACTGAATTTTCTACTTCTGGTCTAGATATTACATG-AGGAAGAATATCCATTATGTTTACAGGTATAAAATGGG i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19201306 172 + 47401472 TTAGCAcctttagatgaagcatgcactcctccttccacagtccta-----------attttcttatatttggcagcttcacacattacttttacct---agaccctcacaggaattgaatttgctacttctgATGTAGATATTACATG-AGAAATGATATTCATTAAGTTTATGGGTATAAAATAAG i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20752875 183 - 38779656 TTAAGACAtttaggtgaagcatgacctcctttttccacagtcctgacatc-accctattttttcatatttggcagcttcacacactagtgttaccc---agactctcataggaattgactttgCCATTTCCAATCTAGatattaaatgaaaaaataatatttattatGTTTATAGGTATAAAATAAG i otoGar3.GL873528 C 0 I 325 s canFam3.chr31 13829084 179 + 39895921 TAAATACCTTTAGGTAAAGTACACACTCCTATTTCCAGAGTCC-AATATCAACTCTATTTTCTCTGATCTGGCAGTTTCACACA--ATTGTTACCTTACTGCCCCTCACAGTAACTGAGTTTGCTGCTCCTGGAGTATATTTTATAGA-AGAAATAAT----ATTACGTTTACAGGTTTAAAATAAG i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=77727.000000 s hg38.chr21_KI270874v1_alt 87265 12 + 166743 TTGTACATAGAG------ s panTro5.chr21 3712537 12 + 33445071 TTGTACATAGAG------ i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338630 12 + 46275980 TTGTACATAGAG------ i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277731 12 - 13858734 TTGTACATAGAG------ i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460608 12 + 32716333 TTGTACATAGAG------ i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415632 12 - 185818997 TTGTACATAGAG------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162240200 12 - 192294377 TTGTACATAGAG------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8720873 12 + 9440265 TTGTACATAGAG------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8450561 12 + 21915920 TTGTACATAGAG------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15025410 12 - 90373283 TTGTACATACAT------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204828 12 + 4234846 TTGTACATAGAG------ i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208830 12 - 13750039 TTGTACATAGAG------ i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19201478 12 + 47401472 TTGTAAATACAG------ i micMur3.chr31 C 0 I 6 s canFam3.chr31 13829263 18 + 39895921 TGGTACACATAGTTTGAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e otoGar3.GL873528 20753058 325 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=1965032.000000 s hg38.chr21_KI270874v1_alt 87277 250 + 166743 AAAAGATATATTTTAATAAAAAT-GAAAATAGATATGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTGTGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATTTAGGCAACAAGCAGAGGCTGACATGGAAAATGGGGAAAGGGTTCCCAGGATGGCCACCAAGATGATTCAAGGTT s panTro5.chr21 3712549 250 + 33445071 AAAAGATATATTTTAATAAAAAT-GAAAATAGATATGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTTATGAGCATTTAGGCAACAAGCAGAGGCTGACATGGAAAATGGGGAAAGGGTTCCCAGGATGGCCACCAAGATGATTCAAGGTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338642 250 + 46275980 AAAAGATATATTTTAATAAAAAT-GAAAATAGGTATGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATTTAGGCAACAAGCAGAGGCTgacatggaaaatggggaaagggttcccaggatggccaccaagatgattcaaggtt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277743 250 - 13858734 AAAAGATATATCTTAATAAAAAT-GAAAATAGATATGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATTTAGGCAACAAGCAGAGGCTgacatggaaaatggggaaagggttcccaggatggccaccaagatgattcaaggtt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460620 250 + 32716333 AAAAGATATACTTTAATAAAAAT-GAAAATAGATACGTACACTTAAGTGGGAAAAGAAGTGAG-AAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGTAAGTTCTATAACATGATAGTGACATGGTAGCCACTAGAGCATATACTCACTCCACATCTTTAGTGAGCATCTAGGCAACAAGCAGAGGCTGACATGGAAAATGGGGAAAGGGTTCCCAGGGTGGCCACCAAGATGATTCAAGGTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155415644 251 - 185818997 AAAAGATATACTTTAATAAAAAT-GAAAATAGATATGCACACTTAAGTGGGAAAAGAAATGAGAAAAAATAGATAAGAAATAATACAGTATGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccacctagatgattcaaggtt i rheMac8.chr3 C 0 I 302 s macFas5.chr3 162240212 250 - 192294377 AAAAGATATACTTTaataaaaat-gaaaatagatatgcacacttaagtgggaaaagaaatgag-aaaaatagataagaaataATACAGTATGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccaccgagatgattcaaggtt i macFas5.chr3 C 0 I 302 s macNem1.NW_012019910v1 8720885 250 + 9440265 AAAAGATATACTTTAATAAAAAT-GAAAATAGATATGCACACTTAAGTGGgaaaagaaatgag-aaaaatagataagaaaTAATACAGTATGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccaccgagatgattcaaggtt i macNem1.NW_012019910v1 C 0 I 310 s cerAty1.NW_012002954v1 8450573 250 + 21915920 AAAAGATATACTTTAATAAAAAT-GAAAATACATATGCACACTTAAGTGGgaaaagaaatgag-aaaaatagataagaaaTAATACAGTACGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAACATCTAGGCAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccaccgagatgattcaaggtt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15025422 250 - 90373283 AAAAGATATACTTTaataaaaat-gaaaatagatatgcacacttaagtgggaaaagaaatgag-aaaaatagataagaaataatatagTATGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccaccgagatgattcaaggtt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2204840 250 + 4234846 AAAAGATATACTTTAATAAAAAT-GAAAATAGATATGCACACTTAAGTGGgaaaagaaatgag-aaaaatagataagaaaTAATACAGTACAATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCATATACTCACTCCACATCTTTAATGAGCATCTAGGTAACAAGCAGAGGCTgacatggaaaatggggaaagggttcctaggatggccaccgagatgattcaaggtt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 208842 250 - 13750039 AAAAGATATACTTTaataaaaat-gaaaatagatatgcacacttaagtgggaaaagaaatgag-aaaaatagataagaaaTAGTACAGTATGATCAATTTGTAAAGCAAGTTCTATAACATGATAGTGACATGGTAGCCATTAGAGCACATACTCACTCCACATCTTTAGTGAGCATCTAGGTAACAAGCACAGGCTgacatggaaaatggggaaagagttcctaggatggccaccaagatgattcaaggtt i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19201496 245 + 47401472 ATAAGATATATTTTAATATAAAT----AGAAGACCTGTACACTTTAGTAAAGAAAGAAGTGAG--AAAACATGTAAGAAATAATATAACATGCTCAAGTTTTAAAGCAAGTTCTATAATACAATAACTACATGGTAGGCATTAGAGTGTGTGCTCATCTCACATCTTTTGTGCCCATCTGGGCAACAATCAGAGGCTGACATAGAGAATAAGGAGAG-GTTTTCAAGATGGCCACCAAGATGATTAGAGGTT i micMur3.chr31 I 6 C 0 s otoGar3.GL873528 20753383 243 - 38779656 ATAAGATATATTTTAATGTAAAT------AAGATCCATACACTTAAGTAGGGAAAGAAGTGAG--AAAATATGTAAGGAATAATATAGCATAGTCAATTTTTAAAACCAGTTCTGGAATACGATAGACTCATGGTTGCCATTAGAGTATAtgctcatgtcacatcctttgtgcccatctaggcaacatttagagaggaacacagaaaatagggaaag-tttccagagagggccactaagatgattagaggtT i otoGar3.GL873528 I 325 C 0 s canFam3.chr31 13829281 249 + 39895921 ATGAGATGTATTTTAATAAAAATCTTAAAAAGATTTGTACACTTATGTGAGGAAAGAAATGAG-AAAAATATACTAGAAATAACATCCCATGATAGATTTTTAAAGTAAGCTTTATAATACAATAGCTATGGAATAGGCAGTAGAGCATATAATCATCCCACATCCTTATTACCCATCTAGAC--CAAAAACAGGCTGACATGGAAAATGTGAGGATGGTTCCCAGGATGGCTGCCAAGATCAGTAGAGGTT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=6006.000000 s hg38.chr21_KI270874v1_alt 87527 1 + 166743 A s panTro5.chr21 3712799 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338892 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277993 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460870 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155416197 1 - 185818997 a i rheMac8.chr3 I 302 C 0 s macFas5.chr3 162240764 1 - 192294377 a i macFas5.chr3 I 302 C 0 s macNem1.NW_012019910v1 8721445 1 + 9440265 a i macNem1.NW_012019910v1 I 310 C 0 s cerAty1.NW_012002954v1 8450823 1 + 21915920 a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15025672 1 - 90373283 a i chlSab2.chr2 C 0 I 311 s manLeu1.NW_012102865v1 2205090 1 + 4234846 a i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 209092 1 - 13750039 a i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201741 0 + 47401472 C e otoGar3.GL873528 20753626 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=6006.000000 s hg38.chr21_KI270874v1_alt 87528 1 + 166743 A s panTro5.chr21 3712800 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338893 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277994 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460871 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155416198 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162240765 1 - 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8721446 1 + 9440265 a i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8450824 1 + 21915920 a i cerAty1.NW_012002954v1 C 0 I 315 s chlSab2.chr2 15025984 1 - 90373283 a i chlSab2.chr2 I 311 C 0 s manLeu1.NW_012102865v1 2205091 1 + 4234846 a i manLeu1.NW_012102865v1 C 0 I 323 s colAng1.NW_012120598v1 209093 1 - 13750039 a i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201741 0 + 47401472 C e otoGar3.GL873528 20753626 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=7626461.000000 s hg38.chr21_KI270874v1_alt 87529 1414 + 166743 AAAAGAAAACCTGGtccaaataggaagagaggaagtcaaattgtc-cctgtttgcaggtgacatgattgtatgtttagaaaaccccatcatcccagcccaaaatctccttaagctgataagcaacttcagcaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaaacattcctatacaccaataatagac--aaacagagaaccaaatcatga-gtgaactcccattcacaattgctactaagagaa-taaaatacctagggataaaatttacaagggatgtgaa-ggacctcttcaaggagaactacaaac-cactgct-caagaaaataagagaggacacaaacaaatggaaaaaca-ttctatgctcacag-ataggaagaagcaatatcatgaaaatggtcatactg-cccaaagtaatttatagatcaatgctatccctgtcaagctaccactgactttcttcacagaattggaaaaaac-tactttaaacttcatatggaaccaaaaaagagcccccatagccaagacaatactaag-aaaaagaacaaagctggaggcgtcatgctatctgacttcaaattatactacaaggctacagtaaccaaaacagcaatggtactggtaccaaaacagatatatagatcaatggaacacaacagagccctcagaaataatgccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaagattccctacttaataaatgttggaaaaactggctagccctatgcagaaaactgaaactggaccccttccttacactttatacaaaaatcaactcaagatggatcaaagacttaaatgtaagacctaggaccataaatatcctagaagaaaacctgggcaataccattcaggacataggcatgggcgaggacttcatgactaaaacaccaaaagcaatggcaacaaaggccaaaattgacaaatgggatctaattaaactaaagagattctacacagcaaaagaaaccaccatcagagtgaacaggcaacctacagaatgggagaaaaattttgcaatctatccatctgacaaagggctaat----agaatctacaattaacttaagcaaatttacaa-gaaaaaaaaa---caaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggtcatcagagaaatgcaaatcaaaaccccagtgagataccatctcacaccagttagaatggcgatcatt-aaaaagtcaggaaacaacagatgatggagaggatgtggagaaataggagcacttttacactgttggtgggagtgtaaactagttcaaccattgtggaagaca s panTro5.chr21 3712801 1417 + 33445071 AAAAGAAAACCTGGtccaaataggaagagaggaagtcaaattgtc-tctgtttgcaggtgacatgattgtatatttagaaaaccccatcatcccagcccaaaatctccttaagctgataagcaacttcagcaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaagcattcctaaacaccaataatagac--aaacagagaaccaaatcatga-gtgaactcccattcacaattgctactaagagaa-taaaatacctagggataaaatttacaagggatgtgaa-ggacctcttcaaggagaactacaaac-cactgct-caagaaaataagagaggacacaaacaaatggaaaaaca-ttctatgctcacag-ataggaagaagcaatatcatgaaaatggtcatactg-cccaaagtaatttatagatcaatgctatccctgtcaagctaccactgactttcttcacagaattggaaaaaac-tactttaaacttcatatggaaccaaaaaagagcccccatagccaagacaatactaag-aaaaagaacaaagctggaggcatcacgctatctgacttcaaattatactacaaggctacagtaaccaaaacagcaatggtactggtaccaaaacagatatatagatcaatggaacacaacagagccctcagaaataatgccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaagattccctatttaataaatgttggataaactggctagccctatgcagaaaactgaaactggaccccttccttacactttatacaaaaatcaactcaagatggatcaaagacttaaatgtaagatgtaggaccataaatatcctagaagaaaacctgggcaataccattcaggatgtaggcacgggcaaagacttcatgactaaaacaccaaaagcaacagcaacaaaggccaaaattgacaaatgggatctaattaaactaaagagattctacacagcaaaagaaactatcatcagaatgaacaggaaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggctaat----agaatctacaattaacttaagcaaatttacaa-gaaaaaaaaaaaacaaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggtcatcagagaaatgccaatcaaaaccccagtgagataccatctcacaccagttagaatggcgatcatt-aaaaagtcaggaaacaacagatgatggagaggatgtggagaaataggagcacttttacactgttggtgggagtgtaaactagttcaaccattgtggaagaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17338894 1414 + 46275980 aaaagaaaacctGGtccaaataggaagagaggaagtcaaattgtc-tctgtttgcaggtgacatgattgtatatttagaaaaccccatcatcccagcccaaaatctccttaagctgataagcaacttcagcaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaagcattcctaaacaccaataatagac--aaacagagaaccaaatcatga-gtgaactcccattcacaattgctactaagagaa-taaaatacctagggataaaatttacaagggatgtgaa-ggacctcttcaaggagaactacaaac-cactgct-caagaaaataagagaggacacaaacaaatggaaaaaca-ttctatgctcacag-ataggaagaagcaatatcatgaaaatggtcatactg-cccaaagtaatttatagatcaatgctatccctgtcaagctaccactgactttcttcacagaattggaaaaaac-tactttaaacttcatatggaaccaaaaaagagcccccatagccaagacaatactaag-aaaaagaacaaagctggaggcatcacgctatctgacttcaaattatactacaaggctacagtaaccaaaacagcaatggtactggtaccaaaacagatatatagatcaatggaacacaacagagccctcagaaataatgccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaagattccctatttaataaatgttggataaactggctagccctatgcagaaaactgaaactggaccccttccttacactttatacaaaaatcaactcaagatggatcaaagacttaaatgtaagacgtaggaccataaatatcctagaagaaaacctgggcaataccattcaggatgtaggcacgggcaaagacttcatgactaaaacaccaaaagcaacagcaacaaaggccaaaattgacaaatgggatctaattaaactaaagagattctacacagcaaaagaaactatcatcagaatgaacaggaaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggctaat----ggaatctacaattaacttaagcaaatttacaa-gaaaaaaaaa---caaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggtcatcagagaaatgccaatcaaaaccccagtgagataccatctcacaccagttagaatggcgatcatt-aaaaagtcaggaaacaacagatgatggagaggatgtggagaaataggagcacttttacactgttggtgggagtgtaaactagttcaaccattgtggaagaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3277995 1417 - 13858734 aaaagaaaacctGGtccaaataggaagagaggaagtcaaattgtc-tctgtttgcaggtgacgtgattgtatatttagaaaaccccatcatcccagcccaaaatctccttaagctgataagcaacttcagcaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaagcattcctatacaccaataatagac--aaacagagaaccaaatcatga-gtgaactcccattcacaattgctactaagagaa-taaaatacctagggatacaacttacaagggatgtgaa-ggacctcttcaaggagaactacaaac-cactgct-caagaaaataagagaggacacaaacaaatggaaaaaca-ttctatgctcacag-ataggaagaagcaatatcatgaaaatggtcatactg-cccaaagtaatttatagatcaatgctatccctgtcaagctaccactgactttcttcacagaattggaaaaaac-tactttaaacttcatatggaaccaaaaaagagcgcccatagccaagacaatactaagaaaaaagaacaaagctggaggcatcacgctatctgacttcaaattatactacaaggctacagtaaccaaaacagcaatggtactggtaccaaaacagatatatagatcaatggaacacaacagagccctcagaaataatgccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccctatgcagaaaactgaaactggaccccttccttacaccttatacaaaaatcaactcaagatggatcaaatacttcaatgtaagacctaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaggccaaaattgacaaatgggatctaactaaactaaagagattctacacagcaaaagaaactatcatcagagtgaacaagaaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggctaatagtcagagtctacaattaacataagcaaatttacaa-gaaaaaaa-----caaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaggaagacatttatgcagccaacagacacatgaaaaaatgctcatcatcactggtcatcagagaaatgcaaattaaaaccacaatgagataccatctcacaccagttagaatggcaatcatt-aaaaagtcaggaaacaaaagatgatggagaggatgtggagaaataggagtgcttttacactgttggtgggagtgtaaactagttcaaccattgtggaagaca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4460872 1417 + 32716333 AAAAGAAAACCTGGtccaaataggaagagaggaagtcaaattgtc-tctgtttgcaggtgacatgattgtatatttagaaaacgccatcatcccagcccaaaatctccttaagctgataagcaacttcagcaa-agtctcaggatacaaaa-tcaatgttc--aaaaatcacaagcattccaatacaccaataacagac--aaacagagaaccaaatcatga-gtgaactcccattcacaattgctactaaaagaa-taaaatacctagggatacaatttacaagggatgtgaa-ggacctcttcaaggagaactacaaac-cactgct-caaggaaataagagaggacacaaacaaatggaaaaaca-ttctatcctcatgg-ataggaagaagcaatatcttgaaaatggccatactg-cccaaagtaatttatagatcaatgctatccccatcaagctaccactgactttcttcacagaattggagaaaac-tactttaaacttcatatggaaccaaaaaagagcccacatagccaagacaatactaagccaaaagaacgaagctggaggcatcacgctatctgacttcaaattatactacaaggccacagtaaccaaaacagcaatggtactggtaccaaaacagatatatagaccaatggaacacaacagagccctcagaaataacgccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccctatgcagaaaactgaaactggaccccttccttacaccttatacaaaaatcaactcaagatggatcaaagacttaaatgtaagacctagaaccataaaaatcctagaagaaaacctatgcaataccattca-gacgtaggcatggccaaagacttcatgactaaaacaccaaaagcaatggcaacaaaggccaaaattgacaaatgggatctaattaaactaaagagattctacacagcaaaagaaactatcatcagagtgaacaggaaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatctacaaataacttaagcaaatttacaa-gaaaaaaaaa---caaacaaccccatcaaaaagtgggcaaaggatatgaacagacaattctcaaaagaagacatttatgcagacaacagacatatgaaaaaatgctcatcatcactggtcatcagagaaatgcaaatcaagaacataatgagataccatctcgtgccaattagaatggcaatcatt--aaaagtcaggaaacaacagatgctggagaagatgtggagaaataggaaggcttttacactgttggtgggactgtaaactagttcaaccattgtggaagaca i nomLeu3.chr25 C 0 I 141 s rheMac8.chr3 155416199 1389 - 185818997 aaaagaaaaCCTAGtccaaataggaagagaggaagtcaaatcatc-tctgtttgcaggtgacatgattgtatatttagaaaaccccatcgtcccagccccaaatcttgttaagctgacaagcaacttcagtaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaaccattcctatacaccaataatagac--aaacagagagccaaatcatga-gtgaactcccattcgcaattgctactaagagaa-taaaatacctaggtatacaatttacaagggatgtgaa-ggacctcttcaaggagaactacaaat-cactgct-caagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatgg-ataggaagaagcaatatcgtgaaaatgtccatacca-cccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcttcacagaattggaaaaaaa-tactttaaacttcatatggaaccaaaaaagagcctgcatagccaagacaatactaagcaagaagaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtaaccaaaacagc-atggtactggtaccaaaacagagttatagaccaatggaatagaacagaggcctcagaaataataccacacatctacaaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccttatgcagaaaa------------------cttataccttatataaaaatcaactcaagatggatcaaagactt-gatctaggaactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaacagcaatggcaacaaaggccaaaattgacaaatgagatctaactaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaaggactaatatccagaatctagaaataacttaggcaaatttacaa-gaaaaaaaaa------aca----catcaaaaagtgggcaaaggatatgaatagacacttttcaaaggaagatatttatgcagccaacagacatatgaaaaaatgctcatcatcactggtcatcagagaaatgcagatcaaaaacacaatgagatacaatctcatgccagttagaatggcgatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggagtgtaaattagttcaaccattgtggaatata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162240766 1389 - 192294377 aaaagaaaaCCTAGtccaaataggaagagaggaagtcaaatcatc-tctgtttgcaggtgacatgattgtatatttagaaaaccccatcgtcccagccccaaatcttgttaagctgacaagcaacttcagtaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaaccattcctatacaccaataatagac--aaacagagagccaaatcatga-gtgaactcccattcgcaattgctactaagagaa-taaaatacctaggtatacaatttacaagggatgtgaa-ggacctcttcaaggagaactacaaat-cactgct-caagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatgg-ataggaagaagcaatatcgtgaaaatgtccataccg-cccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcttcacagaattggaaaaaaa-tactttaaacttcatatggaaccaaaaaagagcctgcatagccaagacaatactaagcaaaaagaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtaaccaaaacagc-atggtactggtaccaaaacagagttatagaccaatggaatagaacagaggcctcagaaataataccacacatctacaaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggccagccttatgcagaaaa------------------cttataccttatataaaaatcaactcaagatggatcaaagactt-gatctaggaactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaacagcaatggcaacaaaggccaaaattgacaaatgagatctaactaaactaaagagcctctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaaggactaatatccagaatctagaaataacttaggcaaatttacaa-gaaaaaaaaa------aca----catcaaaaagtgggcaaaggatatgaatagacacttttcaaaggaagatatttatgcagccaacagacatatgaaaaaatgctcatcatcactggtcatcagagaaatgcagatcaaaaacacaatgagatacaatctcatgccagttagaatggcgatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggactgtaaactagttcaaccattgtggaatata i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8721447 1395 + 9440265 aaaagaaaaCCTAGtccaaataggaagaga-gaagtcaaatcatcttctgtttgcaggtgacatgattgtatatttagaaaaccccatcatcccagccccaaatcttgttaagctgacaagcaacttcagtaatagtctcaggatacaaaattcaatgttccagaaaatcacaaccatctct-taca-caataatagacaaaaacagagagccaaatcatgatgtgaactcccattcgcaatttctactaagagaattaaaatacctagttatacaatttacaa-ggatgtgaagggacctcttcaaggagaactacaaatccactgctccaagaaaataaaagaggacacaaaacaat-gaaaaccattttcatgctcatgg-atag--aagaaccatatc-tgaaaatgtccataccgccccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcttcacagaattggaaaaaaa-tactttaaacttcatatggaaccaaaaaagagcctgcatagccaagacaatactaagcaaaaagaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtaaccaaaacagc-gtggtactggtaccaaaacagagttatagaccaatggaatagaacagaggcctcagaaataataccacacatctacaaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccttatgcagaaaa------------------cttataccttatataaaaatcaactcaagatggatcaaagactt-gatctaggaactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggacataggcatgggcaaagacttcatgactaaaacaccaacagcaatggcaacaaaggccaaaattgacaaatgagatctaactaaactaaagagcctctgcacagcaaaagaaactaccatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaaggactaatatccagaatctagaaataacttaggcaaatttacaaggaaaaaaaaa------aca----catcaaaaagtgggcaaaggatatgaatagacacttttcaaaggaagatatttatgcagccaacagacatatgaaaaaatgctcatcatcactggtcaccagagaaatgcaaatcaaaaacacaatgagatacaatctcatgccagttagaatggcgatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggagtgtaaattagttcaaccattgtggaatata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8451140 1387 + 21915920 aaaagaaaaCCTAGtccaaataggaagagaggaagtcaaatcatc-tctgtttgcaggtgacatgattgtatatttagaaaaccccatcgtcccagccccaaatcttgttaaactgacaagcaacttcagtaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaaccattcctatacaccaataatagac------agagagccaaatcatga-gtgaactcccattcgcaattgctactaagagaa-taaaatacctaggtatacaatttacaagggatgtgaa-ggacctcttcaaggagaactacaaat-cactgct-caagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatggaatgggaagaagcaatatcgtgaaaatgtccatactg-cccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcttcacagaattggaaaaaaa-tactttaaacttcatatggaaccaaaaaagagcccgcatagccaagacaatactaagcaaaaagaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtaaccaaaacagc-atggtactggtaccaaaacagagttatagaccaatggaatagaacagaggcctcagaaataataccacacatctacaaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccttatgcagaaaa------------------cttataccttatataaaaatcaactcaagatggatcaaagactt-gatctaggaactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaacagcaatggcaacaaaggccaaaattgacaaatgagatctaactaaactaaagagcctctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctagccatctgacaaaggactaatatccagaatctagaaataacttaggcaaatttaaaagaaaaaaaaaa------aca----catcaaaaagtgggcaaaggatatgaatagacacttttcaaaagaagatatttatgcagccaacagacatatgaaaaaatgctcatcatcactggtcatcagagaaatgcagatcaaaaacacaatgagatacaatctcatgccagttagaatggcgatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggagtgtaaattagttcaaccattgtggaatata i cerAty1.NW_012002954v1 I 315 C 0 s chlSab2.chr2 15025985 1393 - 90373283 aaaagaaaaCCTAGtccaaataggaagagaggaagccaaatcatc-tctgtttgcaggtgacatgattgtatatttagaaaaccccatcgtctcagccccaaatcttgttaagctgacaagcaacttcagtaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaagcattcctatacaccaataatagat--caacagagagccaaatcatga-gtgaactcccattcacaattgctactaagagaa-taaaatacctaggtatacaatttacaagggatgtgaa-ggacctcttcaaggagaactacaaat-cactgct-caagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatgg-ataggaagaagcaatatcgtgaaaatgtccatactg-cccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcctcacagaattggaaaaaaa-tactttaaacttcatatggaaccaaaaaagagcccacatagccaagacaatactaagaaaaaggaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtaaccaaaacagc-atggtactggtaccaaaacagagatacagaccaatggaatagaacagaggcctcagaaataataccacacatctacaaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccttatgcagaaaa------------------cttataccttatataaaaatcaactcaagatggatcaaagactt-gatctaggaactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaacagcaatggcaacaaaggccaaaattgacaaatgggatctagttaaactaaagaggttctgcgcagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaaggactaatatccagaatctagaaataacttaggcaaatttacaa-gaaaaaaaaaa--cacaca----catcaaaaagtggacaaaggatatgaatagacacttctcaaaagaagatatttatgcagccaacagacatatgaaaaaatgctcatcatcactggccatcagagaaatgcagatcaaaaacacaatgagatacaatctcatgccagttagaatggcaatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggagtgtaaattagttcaaccattgtggaatata i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2205415 1389 + 4234846 AAAAGAAAACCTAGtccaaataggaagagaggaagtcaaatcatc-tctgtttgcaggtgacatgattgtatatttagaaaaccccatcgtcccagccccaaatcttgttaagctgacaagcaacttcagtaa-agtctcaggatacaaaa-tcaatgtcc--aaaaatcacaaccattcctgtacaccaataatagac--aaacagagagccaaatcatga-gtgaactcccattcgcaattgctactaagagaa-tacaatacctaggtatacaatttacaagggatgtgaa-ggaccccttcaaggagaactacaaac-cactgct-caagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatgg-ataggaagaagcaatatcgtgaaaatgtccatactg-cccaaagtaatttatagatcaatgctatccccatcaagctaccaatgacttgcttcacagaattgggaaaaaa-tactttaaacttcatatggaaccaaaaaagagcccgcatagccaagacaatactaagcaaaaagaacaaaactggaggcatcatgctatctgacttcaacttatactgcaaggctacagtaaccaaaacagc-atggtactggtaccaaaacagagttatagaccaatggaatagaacagaggcctcagaaataatactacacatctataaccatctgatctttgacaaacctggca-----aagcaatggggaaaagattccctatttaataaaagttggaaaaactggctagccttatgcagaaaa------------------cttataccttatataaaaatcaactcaagatggatcaaagactt-gatctaggaactaggaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaataccaacagcaatggcaacaaaggccaaaattgacaagtgagatctaactaaactaaagagcctctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatcaatccatctgacaaaggactaatatccagaatctagaaataacttaggcaaatttacaa-gaaaaaaaaa------aca----catcaaaaagtgggcaaaggatatgaatagacacttttcaaaagaagatatttatgcagccaacagacatatgaaaaaatgctcatcatcactggtcatcagagaaatgcagatcaaaaacacaatgagatacaatctcatgccagttagaatggcgatcattaaaaaagtcagggaacaacagatgctggagaagatgtggagaaataagaaggcttttacactgttggtgggagtgtaaattagttcagccattgtggaatata i manLeu1.NW_012102865v1 I 323 C 0 s colAng1.NW_012120598v1 209094 1400 - 13750039 aaaagaaaacctaGtccaaacaggaagagaggaagtcaaatcatc-tctgtttgcagatgacatgattgtgtatttagaaaaccccatcatccgagccccaaatctccttaatgtgacaagcaacttcagtaa-aatctcaggatacaaaa-tcaatgtcc--aaaaatcacaaccattcctatacaccaataatagag--ca--------ccaaatcatga-gtgaactcccattcacaattgctactaagagaa-taaaatacctagggatacaacttacaagggatgtgaa-gga-ctcttcaaggagaactacaaat-cactgct-caagaaaataaaagaggacacaaacaaatggaaaaacatttccatgctcatgg-ataggaagaagcaatatcgtgaagatgtccatactg-cccaaagtaatttatagaccaatgctatccccatcaagctaccaatgacttgcttcacagaattggaaaaaaactactttaaacttcatatggaaccaaaaaagagcccacatagccaagacaatactaagcaaaaagaacaaaactggaggcatcatgctatctgacttcaacttatactacaaggctacagtcaccaaaacagc-atggtactggtaccaaaacagagttatagaccaacggaatagaacagaggccttagaaataatgccacacacctacaaccatctgatctttgacaaacctgaca-----aagcaatggggaaaagattccctatttaataaatgttggaaaaactggctagccctatgcagaaaactgaaactagaccccttccttataccttatacaaaaaccaactcaagatggatcaaagactt-gatctaggacccagaaccataaaaatcctagaagaaaacctgggcaataccattcaggatgtaggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaggccaaaattgacaaatgggatctaattaaactaaagaggttctgcgcagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggaaaaaatttttgcaatctatccatctgacaaagaactaatatccagaatctagaaataacttaggcaaatttacaagaaggaaaaaa------aaa----catcaaaaagtgggcaaaggatatgaactgacacttctcaaaagaagatatttatgcagccaacagacatatgaaaaaaagctcataatcactggtcatcagagaaatgcagatcaaaaacacaatgagatacaatttcatgccagttagaatggcaatcattaaaaaagtcaggaaacaacagatgctggagaagatgtggagaaatagaaaggcttttacactgttggtgggagtgtaaattagttcaaccattgtggaatata i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201741 0 + 47401472 C e otoGar3.GL873528 20753626 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=449717.000000 s hg38.chr21_KI270874v1_alt 88943 90 + 166743 gtgtggtgattcctcaaggatctagagctagaaataccatttgacacagt---gatcccattactgggtatatacccaaaggattataaaaca s panTro5.chr21 3714218 90 + 33445071 gtgtggtgattcctcaaggatctagagctagaaataccatttgacacagt---gatcccattactgggtatatacccaaaggattataaatca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17340308 90 + 46275980 gtgtggtgattcctcaaggatctagagctagaaataccatttgacacagt---gatcccattactgggtatatacccaaaggattataaatca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3279412 90 - 13858734 gtgtggtgattcctcaaggatctagagctagaaataccatttgacccagt---gatcccattactgggtatatacccaaaggattataaatca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4462430 89 + 32716333 ctgtggcgattccgcgggtatatagagggtcgaatactatttgggccggcttgggta----tactgggtatatacccaaatggtttggggtca i nomLeu3.chr25 I 141 C 0 s rheMac8.chr3 155417588 89 - 185818997 gtgtggtgattcctcaaggatctagaacaagaaataccatttggcccagc---aatctcattactgggtataaaccc-aaagattataagtca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162242155 90 - 192294377 gtgtggtgattcctcaaggatctagaacaagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattataagtca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8722842 90 + 9440265 gtgtggtgattcctcaaggatctagaacaagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattataagtca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8452527 90 + 21915920 gtgtggtgattcctcaaggatctagaacaagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattataagtca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15027378 90 - 90373283 gtgtggtgattcctcaaggatctagaactagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattaaaagtca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2206804 90 + 4234846 gtgtggtgattcctcaaggatctagaacaagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattataagtca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 210494 90 - 13750039 gtgtggtgattcctcaaggatctagaactagaaataccatttggcccagc---aatctcattactgggtatatacccaaaagattataagtca i colAng1.NW_012120598v1 C 0 I 11 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201741 0 + 47401472 C e otoGar3.GL873528 20753626 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=30339.000000 s hg38.chr21_KI270874v1_alt 89033 7 + 166743 tgctact s panTro5.chr21 3714308 7 + 33445071 tgctact i panTro5.chr21 C 0 C 0 s panPan2.chr21 17340398 7 + 46275980 tgctact i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3279502 7 - 13858734 tgctact i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4462519 7 + 32716333 ttctact i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155417677 7 - 185818997 ttctact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162242245 7 - 192294377 ttctact i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8722932 7 + 9440265 ttctact i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8452617 7 + 21915920 ttctact i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15027468 7 - 90373283 ttctact i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2206894 7 + 4234846 ttctact i manLeu1.NW_012102865v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201741 0 + 47401472 C e otoGar3.GL873528 20753626 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I e colAng1.NW_012120598v1 210584 11 - 13750039 I a score=2624246.000000 s hg38.chr21_KI270874v1_alt 89040 472 + 166743 acaaagacacattcatgtatatgtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactagattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtccttttcagggacatgaatgtagctggaaaccatcactctcagcacactaacacaagaacagaaaaccaaacactgcgtgttctcacaagtgggaggtgaacaatgagaacacatggacatagggagaggaacatcacacaccagggcttgttggggagtggggggctaggggagggataacattagcagaaatacctaatgtagatgatgggttgatgggtgcagcaaactaccatggcacgtgtatacctatgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat------aaaaattaa s panTro5.chr21 3714315 472 + 33445071 acaaagacacattcatgtatatgtttattgcagcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactagattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtccttttcagggacatgaatgtagctggaaaccatcattctcagcacactaacacaagaacagaaaaccaaacactgcatgttctcacaagtgggaggtgaacaatgagaacacatggacatagggagaggaacatcacacaccagggcttgttggggagtggggggctaggggagggataacattagcagaaatacctaatgtagatgatgggttgatgggtgcagcaaactaccatggcacgtgtatacctatgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat------aaaaattaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17340405 472 + 46275980 acaaagacacattcatgtatatgtttattgcagcactattcacgatagcaaagacttggaaccaacccaaatgtccatcagtgatagactagattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtccttttcagggacatgaatgtagctggaaaccatcattctcagcacactaacacaagaacagaaaaccaaacactgcgtgttctcacaagtgggaggtgaacaatgagaacacatggacatagggagaggaacatcacacaccagggcttgttggggagtggggggctaggggagggataacattagcagaaatacctaatgtagatgatgggttgatgggtgcagcaaactaccacggcacgtgtatacctatgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat------aaaaattaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3279509 470 - 13858734 acaaagacacattcatgtatatgtttattgcggcactattcacaatagcaaagacttggaaccaaccc-aatgtccatcagtgatagactagattaagaaaatgtggcacttatacaccatgggttactatgcagccat-aaaaaggataagttcatgtccttttcagggacgtgaatgtagctggaaaccatcattctcagcacactaacacaagaacagaaaaccaaacactgcgtgttctcacaagtgggaggtgaacaatgagaacacatggacaaagggaggggaacatcacacaccagggcttgttggggggtggggggctaggggagggataacattagcagaaatacctaatgtagatgatgggttgatgggtgcagcaaaccaccatggcatgtgtatacctatgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat------aaaaattaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4462526 473 + 32716333 gtaaagacacatgcacacatatgtttattgtggcactattcacagcagcaaagacgtggaaccaacccaaatgtccttcaataatagactggataaaggaaatgtggcacatatacaccatggaatactatgcagccat-aaaaaggataagttcatgtcctttgcagggacatggatatagttggaaaccatcattctcagcaaactaacacaagaacaaaaaaccaaacaccgcatgttctcataagtgggaggtgaacaatgagaacacatggacatagagagaggaacatcacacaccacggcttgtt-gggagtggggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgaatgcagcaaaccaccatggcaagtgtatacctgtataacaaaactgcatgttctgcacatgtacctctgaacttaaagtataat---aaaaaaaaTGTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155417684 475 - 185818997 ataaagacacatgcacacgtatgtttattgtggcactattcacaatagcaaagacgtggaaccaacccaaatgtccatcaataatagactgaataaaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggacaagttcatgtcctttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatgggaggtgaaaaatgagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgctgtgtgcagcaaaccaccatgacacgtgtatacctacgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataata--aaaaaaaaaTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162242252 477 - 192294377 ataaagacacatgcacacgtatgtttattgtggcactattcacaatagcaaagacgtggaaccaacccaaatgtccatcaataatagactgaataaaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggacaagttcatgtcctttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatgggaggtgaaaaatgagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgggtgcagcaaaccaccatggcacatgtatacctacgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataataaaaaaaaaaaTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8722939 477 + 9440265 ataaagacacatgcacacgtatgtttattgtggcactattcacaatagcaaagacgtggaaccaacccaaatgtccatcaataatagactgaataaaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggacaagttcatgtcctttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatgggaggtgaaaaatgagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgggtgcagcaaaccaccatggcacgtgtatacctacgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataataataaaaaaaaaTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8452624 474 + 21915920 ataaagacacatgcacacgtatgtttattgtggcactattcacaatagcaaagacgtggaaccaacccaaatgtccatcaataatagaccgaataaaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtcctttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatgggaggtgaaaaatgagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgggtgcagcaaaccaccatggcacgtgtatacctacgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat---taaaaaaaTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15027475 474 - 90373283 ataaagacacatgcacatgtatgtttattgtggcactattcacaatagcaaagacatggaaccaacccaaatgtccatcaataatagactggataaaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtcccttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatggaaggtgaaaaatgagagcacatggatatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggaaggataacattaggagaaatacctgacgtagatgatgggttgatgggtgcagcaaaccaccatggcatgtgtatacctgtgtaacaaacctgcacattctgcacatgtatcccagaacttaaagtataat---aaaaaaaaaTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2206901 474 + 4234846 ataaagacacatgcacacgtatgtttattgtggcactattcacaatagcaaagacgtggaaccaacccaaatgtccatcaataatagaccgaataaaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttcatgtcctttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacatcgcatgttctcataaatgggaggtgaaaaatgagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggggtagggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgggtgcagcaaaccaccatggcacgtgtatacctacgtaacaaaactgcacattctgcacatgtacccctgaacttaaagtataat---aaaaaaaaTTTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 210595 477 - 13750039 ataaagacacatgcacacatatgtttattgtggcactattcacaatagcaaagacgtggaaccaacccaaatgtccatcagtaatagactggataaaggaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggataagttgatgtcccttgcagggatgtggatgtagctggaaaccatcattctcagcaaactaacacaagaacaggaaaccaaacatcgcatgttctcataaatgggaggtgaacaataagagcacatggacatagggagaggaacatcacacaccagggcttatt-gggtattgggggctaggggagggataacattaggagaaatacctaatgtagatgatgggttgatgggtgcagcaaaccaccatggcacgtgtacacctatgtaacaaaactggacattctgcacgtgtacccctaaacttaaagtataataaaaaaaaaaaaTTT i colAng1.NW_012120598v1 I 11 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201741 0 + 47401472 C e otoGar3.GL873528 20753626 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13829530 0 + 39895921 C e mm10.chr16 78130292 762 + 98207768 I a score=1221244.000000 s hg38.chr21_KI270874v1_alt 89512 162 + 166743 aaaaGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCATGTGATGTGGCTATTTCTAAAGATGGACCAGGTTGAGCAGAAGTGGTATCACTGTTCACTTTAGACA--------GAGCTCTGAACACAGGAGGGGAAGAAAATTTTTAAAAGAAAAA s panTro5.chr21 3714787 162 + 33445071 aaaaGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCATGTGATGTGGCTATTTCTAAAGATGGACCAGGTTGAGCAGAAGTGGTATCACTGTTCACTTTAGACA--------GAGCTCTGAACACAGGAGGGGAAGAAAATTTTTAAAAGAAAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17340877 162 + 46275980 aaaaGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCATGTGATGTGGCTATTTCTAAAGATGGACCAGGTTGAGCAGAAGTGGTATCTCTGTTCACTTTAGACA--------GAGCTCTGAACACAGGAGGGGAAGAAAATTTTTAAAAGAAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3279979 162 - 13858734 aaaaGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCACGTGATGTGGCTATTTCTAAAGATGGACCAGGTTGAGCAGAAGTGGTATCACTGTCCACTTCAGACA--------GAGCTCTGAACACAGGAGGGGAAGAAAATTTTTAAAAGAAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4462999 162 + 32716333 AAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCATGTGATGTGGCTATTTCTAAAGATGGACCAGGATGAGCAGAAGTGGTATCACTGTTCACTTTAGACA--------GAGCTCCGAATGCAGGAGGGGAAGAAAATTTTTAAAAGAAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418159 162 - 185818997 TAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCACGTGATGTAGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGACA--------CAGCTCTGAACAAAGGAGGGGAAGAAAATTTTTAAAAGAAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162242729 162 - 192294377 TAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCACGTGATGTGGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGACA--------CAGCTCTGAACAAAGGAGGGGAAGAAAATTTTTAAAAGAAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723416 161 + 9440265 T-AAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCACGTGATGTAGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGACA--------CAGCTCTGAACAAAGGAGGGGAAGAAAATTTTTAAAAGAAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453098 162 + 21915920 TAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCATGTGATGTAGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGACA--------CAGCTCTGAACAAAGGAGAGGAAGAAAATTTTTAAAAGAAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15027949 162 - 90373283 TAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACGAGAGA--ATCACGTGATGTAGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGACA--------GAGCTCTGAACAAAGGAGAGGAAGAAAAATTTTAAAAGAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207375 162 + 4234846 TAAAGAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCACGTGATGTAGCTATTTCTAAAGATGGACCAGGATAAGCAGAAGTGGTATCACTGTTCCCTTTAGACA--------CAGCTCTGAACAAAGGAAGGGAAGAAAATTTTTAAAAGAAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211072 161 - 13750039 T-AAAAGAAAACCTGGTCATGAAGAGTTTCTCCAAGGAAGACCAGAGA--ATCACGTGATGTGGCTATTTCTAAACATGGACCAGGATAAACAGAACTGATATCACTGTTCACTTTAGACA--------GAGTTCTGAACAAAGGAGGGGGAGAAAATTTTTAAAAGAAAAA i colAng1.NW_012120598v1 C 0 I 1 s micMur3.chr31 19201741 170 + 47401472 AAAAGAGAAAGCCTGATCGTGGAGAGTCTCTCCAAGGAAGACTAGCGA--ATCACATCATGCAGCTGTGTCTAAGGATGGAATAGGATGAGCTGAAGCAGTATCTCCATTCATTTTAGATAATCTGCTGGAGCTCTGGACACAGGAGGGGAGGGAAATTTTTGAAAGGAAAA i micMur3.chr31 C 0 I 363 s otoGar3.GL873528 20753626 160 - 38779656 AAAAGAGAAAGCCCGATC-TAGGGAGTCTCTCCAGGAAAGACTAGA-----------CATGTGGCCGTGTCTAAAGATGGACTAGGGTGAGCAGATGCAATATCTTCATTCACTTTACACAAGCAGCTGGAGCTCTAGACACAGGAGGGGAGTTAAATTTTTAAAAGAAAAA i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 13829530 165 + 39895921 AGAAGAGAAAGCCTGATCATGAAGATTATCTCCAACGAAGACTAAAGAGGATTGCATCAT------ATTTCTAAAGACGGTAAAGGATGAACAAAAGCAGTGTCACTGTTCATTTAAGACAGCTGGGCAGAGCTCTAGAAACAGGAGGGGTGGAAATTTTTTAAAACAAAA- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=384398.000000 s hg38.chr21_KI270874v1_alt 89674 61 + 166743 GATCCAAAATTTTTTAAAAGAAGAA-TTGTAAATTGGCAAACTCTGTTAAAGAAAGAACCAA s panTro5.chr21 3714949 61 + 33445071 GATCCAAAATTTTTTAAAAGAAGAA-TTGTAAATTGGAAAACTCTGTTAAAGAAAGAACCAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341039 61 + 46275980 GATCCAAAATTTTTTAAAAGAAGAA-TTGTAAATTGGAAAACTCTGTTAAAGAAAGAACCAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280141 61 - 13858734 GATCCAAAATTTTTTAAAAGAAGAA-TTGTAAATTGGCAAACTCTGTTAAAGAAAGAACTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463161 61 + 32716333 GATCCAAAAATTTTTAAAAGAAGAA-TTGTAAATTGGCAAACTCTGTTAAGGAAGGAACCGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418321 61 - 185818997 GATCCAAAAATTTTTAAAAGTAGTA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162242891 61 - 192294377 GATCCAAAAATTTTTAAAAGTAGTA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723577 61 + 9440265 GATCCAAAAATTTTTTAAAGTAGTA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453260 61 + 21915920 GATCCAAAAATTTTTAAAAGTAATA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028111 61 - 90373283 GATCCAAAAATTTTTAAAAGTAGAA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207537 61 + 4234846 GATCCAAAAATTTTTAAAAGTAGTA-TTGTAAACTGACAAACTCTGTTAAAGAAAGAATCAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211234 61 - 13750039 GATCCAAAAATTTTTAAAAGTAGAA-TTGTAAACTGATAAACTCTGTTAAAGAAAGAATCAA i colAng1.NW_012120598v1 I 1 C 0 s otoGar3.GL873528 20753787 60 - 38779656 AACCTACAAATTTTTAAAAGAAGAG-CTGTTAATAGAC-AATTCCACTAAGGGAAGAAcaaa i otoGar3.GL873528 I 1 I 568 s canFam3.chr31 13829695 58 + 39895921 ----CAAAATTGTGAAAAAAAAATAGTTGTAAATAGACGAATTCTGCTAAAGAAAGAACAAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201911 363 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=241581.000000 s hg38.chr21_KI270874v1_alt 89735 41 + 166743 AAGAAGGTGAGTTTTTGGGAGCATTCTAAAGACAGTCCTCT-- s panTro5.chr21 3715010 41 + 33445071 AAGAAGGTGAGTTTTTGGGAGCATTCTAAAGACACTCCTCT-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341100 41 + 46275980 AAGAAGGTGAGTTTTTGGGAGCATTCTAAAGACACTCCTCT-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280202 41 - 13858734 AAGAAGGTGAGTTTTTGGGAGCATTCTGAAGACACTCCTCT-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463222 41 + 32716333 AAGAAGGTGAGTTTTTGGGAGCACTCTGAAGACACTCCTCT-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418382 41 - 185818997 AAGAAGGTGAGCTTTTGGGAGAGTTCTGAAGACACTTCTCA-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162242952 41 - 192294377 AAGAAGGTGAGCTTTTGGGAGCGTTCTGAAGACACTTCTCA-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723638 41 + 9440265 AAGAAGGTGAGCTTTTGGGAGCGTTCTGAAGACACTTCTCA-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453321 41 + 21915920 AAGAAGGTGAGCTTTTGGGAGCATTCTGAAGACACTTCTCT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028172 41 - 90373283 AAGAAGGTGAGCTTTTGGGAGCATTCTGAAGACACTTCTCT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207598 41 + 4234846 AAGAAGGTGAGCTTTTGGGAGCGTTCTGAAGACACTTCTCT-- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211295 41 - 13750039 AAGAAGATGAGCTTTTGGGAGCATTCTTAAGACACTCCTCT-- i colAng1.NW_012120598v1 C 0 C 0 s canFam3.chr31 13829753 43 + 39895921 GAAAAGGCACGTTGTAGGCGACATTCTGAGGACACTCCTCTTT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19201911 363 + 47401472 I e otoGar3.GL873528 20753847 568 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=67106.000000 s hg38.chr21_KI270874v1_alt 89776 9 + 166743 AATTAAATA s panTro5.chr21 3715051 9 + 33445071 AATTAAATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341141 9 + 46275980 AATTAAATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280243 9 - 13858734 AATTAAATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463263 9 + 32716333 AATTAAGTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418423 9 - 185818997 AATTAAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162242993 9 - 192294377 AATTACATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723679 9 + 9440265 AATTAAATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453362 9 + 21915920 AATTAAATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028213 9 - 90373283 AATTAAATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207639 9 + 4234846 AATTAAATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211336 9 - 13750039 AATTAAATA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19202274 9 + 47401472 AATTAAATA i micMur3.chr31 I 363 C 0 s canFam3.chr31 13829796 9 + 39895921 GACTAAATA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e otoGar3.GL873528 20753847 568 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=746668.000000 s hg38.chr21_KI270874v1_alt 89785 100 + 166743 AGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAATAGTCCCCACCCCAGTTTAGAGATCACATTCAAATAAGCAAACTCTGT s panTro5.chr21 3715060 100 + 33445071 AGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAATAGTCCCCACCCCAGTTTAGAGATCACATTCAAATAAGCAAACTCTGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341150 100 + 46275980 AGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAATAGTCCCCACCCCAGTTTAGAGATCACATTCAAATAAGCAAACTCTGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280252 100 - 13858734 AGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAACAGTCCCCACCCCAGTTTAGAGATCACATTCAAATAAGCAAACTCTGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463272 100 + 32716333 AGCCATCAGATTCTTTCAGTGAGGATAATCATGGCTGAGAGGAGAGTTCCAGTAGTCCCCACCCCAGTTTAGAGATCACATTGAAATAAGCAAACTGTGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418432 100 - 185818997 AGCCATAAGATTATTCCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGGCAAACTGTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162243002 100 - 192294377 AGCCATAAGATTATTCCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGGCAAACTGTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723688 100 + 9440265 AGCCATAAGATTATTCCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTGGAGATCACATTCAAATAGGCAAACTGTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453371 100 + 21915920 AGCCATAAGATTATTCCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGGCAAACTGTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028222 100 - 90373283 AGCCATAAGATTATTTCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGGCAAACTGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207648 100 + 4234846 AGCCATAAGATTATTCCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCTCCACTCCCGTTTAGAGATCACATTCAAATAGGCAAACTGTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211345 100 - 13750039 AACCATAAGATTATTTCAGTAAGGATAATCATGGCTGAGAGGAGAGTTCCAATGGTCCCCACCCCAGTTTAGAGATCACATTCAAATACGCAAACTGTGT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19202283 100 + 47401472 AGCAATCAGATTCTTTTAGTAAGGATAAACACTGTAGGGAGGAGAGTTCCAATAGTCATCAGCCCTAGTGAGAGCGCATGTTCAACTAAGTAAATTGTGT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20754415 100 - 38779656 AGCAATCAGATCCTTTTAGCAAGGATAACCACTGCAGAAAGGAGAGTTCCAACAGCCATCAGTTCAATTTAGAGTTCAAGTTCAATTAAGTAAACTGTGT i otoGar3.GL873528 I 568 C 0 s canFam3.chr31 13829805 99 + 39895921 AGTAATCAAGTTATTTGAAC-AGGATAATCACTGCCAAAAGAGGAGTTCCAATAACCATCTGTCCAATTTAGAGAACACGTTCAACTAACGAAACTGTGC i canFam3.chr31 C 0 I 487 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=239859.000000 s hg38.chr21_KI270874v1_alt 89885 27 + 166743 AAACACATCCTGAGTTCAGGTTTGTTT s panTro5.chr21 3715160 27 + 33445071 AAACACATCCTGAGTTCAGGTTTGTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341250 27 + 46275980 AAACACATCCTGAGTTCAGGTTTGTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280352 27 - 13858734 AAACACATCCTGAGTTCAGGTTTGTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463372 27 + 32716333 AAACACATCCTGAGTTCAGGTTTGTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418532 27 - 185818997 AAACACATCCTGAGTTCAGGTTTGTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162243102 27 - 192294377 AAACACATCCTGAGTTCAGGTTTGTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723788 27 + 9440265 AAACACATCCTGAGTTCGGGTTTGTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453471 27 + 21915920 AAACACATCCTGAGTTCAGGTTTGTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028322 27 - 90373283 AAACACATCCTGAGTTCAGGTTTGTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207748 27 + 4234846 AAACACATCCTGAGTTCAGGTTTGTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211445 27 - 13750039 AAACACATCCTGAGTTCAGGTTTGTTT i colAng1.NW_012120598v1 C 0 I 117 s micMur3.chr31 19202383 27 + 47401472 AAACACGTCCTGAGTTTGAGTTTGTTT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20754515 27 - 38779656 AGACACATGCTAAGTTCGAGTTTGTTT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13830391 27 + 39895921 AACCACACCCTGACTTCAGATTTGTTT i canFam3.chr31 I 487 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=24147.000000 s hg38.chr21_KI270874v1_alt 89912 3 + 166743 CCC s panTro5.chr21 3715187 3 + 33445071 CCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341277 3 + 46275980 CCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280379 3 - 13858734 CCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463399 3 + 32716333 CCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418559 3 - 185818997 CCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162243129 3 - 192294377 CCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723815 3 + 9440265 CCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453498 3 + 21915920 CCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028349 3 - 90373283 CCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207775 3 + 4234846 CCC i manLeu1.NW_012102865v1 C 0 C 0 s micMur3.chr31 19202410 3 + 47401472 CTC i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20754542 3 - 38779656 CTC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13830418 3 + 39895921 CCC i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I e colAng1.NW_012120598v1 211472 117 - 13750039 I a score=970464.000000 s hg38.chr21_KI270874v1_alt 89915 132 + 166743 CAGTACAAAAACAGAGCCAAGGAACAACAAATAAATACTTACTGA---ATG--TCCTCTACGCTGGGTACCACAATTGATGCTGAAGGACAAGAATTACAAAGAACAAGTTAGAGTCCTTT------CTAAGTCAAGTGATCC s panTro5.chr21 3715190 132 + 33445071 CAGTACAAAAACAGAGCCAAGGAACAACAAACAAATACTTACTGA---ATG--TCCTCTACGCTGGGTACCACAATTGATGCTGAAGGACAAGAATTACAAAGAACAAGTTAGAGTCCTTT------CTAAGTCAAGTGATCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341280 132 + 46275980 CAGTACAAAAACAGAGCCAAGGAACAACAAACAAATACTTACTGA---ATG--TCCTCTACGCTGGGTACCACAGTTGATGCTGAAGGACAAGAATTACAAAGAACAAGTTAGAGTCCTTT------CTAAGTCAAGTGATCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280382 132 - 13858734 CAGTACAAAAACAGAGCCAAGGAACAACAAATAAATACTTACTGA---ATG--TCCTCTACACTGGGTACCACAATTGATGCTGAAGGACAAGAATTACAAAGAACAAGTTAGAGTCCTTT------CTAAGTCAAGTGATCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463402 129 + 32716333 CAGTACAAAAACAGAGCCAAGGAACAACAAATAAATACTTACTGA---ATG--CCCTCTACACTGGGTACCACAATTGATGCTGAAGG---AGAATTACAAAGAACAAGTTAGAATCCTTT------CTAAGTCAAGTGATCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418562 132 - 185818997 CAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGA---ATG--TCCTCTATGCTGGGTACCACAATTGATGCTGAAGGAGAAGAATTACAAAGAACAAGTTAGAATCCTTT------CTAAGACAAGTGATTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162243132 132 - 192294377 CAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGA---ATG--TCCTCTATGCTGGATACCACAATTGATGCTGAAGGAGAAGAATTACAAAGAACAAGTTAGAATCCTTT------CTAAGACAAGTGATTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723818 132 + 9440265 CAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGA---ATG--TCCTCTATGCTGGGTACCACAATTGATGCTGAAGGAGAAGAATTACAAAGAACAAGTTAGAATCCTTT------CTAAGACAAGTGATTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453501 132 + 21915920 CAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGA---ATG--TCCTCTATGCTGGGTACCACAATTGATGCTGAAGGAGAAGAATTACAAAGAACAACTTAGAATCCTTT------CTAAGACAAGTGATTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028352 132 - 90373283 CAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGA---ATG--TCCTCTATGCTGGGTACCACAATTGATGCTGAAGGAGAAGAATTCCAAAGAACAAGTTAGAATCCTTT------CTCAGACAAGTGATTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207778 132 + 4234846 CAGTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGA---ATG--TCCTCTATGCTGGGTACCACAATTGATGCTGAAGGAGAAGAATTACAAAGAACAAGTTAGAATCCTTT------CTAAGACAAGTGATTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211589 132 - 13750039 cagTACAAAAATAGAGCCAAAGAACAACAAATAAATACTTACTGA---ATA--TCCTTTATGCTGGGTACCACAGTTGATGCTGAAGGAGAAGAATTACAGAGAACAAGTTAGAATCCTTT------CTAAGACAAGTGATTC i colAng1.NW_012120598v1 I 117 C 0 s micMur3.chr31 19202413 135 + 47401472 CAGTACAAAAATAGAAACAGGTAACAACAAATAAATATTTAATGAAATATT--TCCTCTGCTCTAGGTACCACAATTAGTGCTCAGGGAAAAGAATTACAAGGAACAAGCTAGAGACTCTT------TTAAGTCACGTGATCC i micMur3.chr31 C 0 I 460 s otoGar3.GL873528 20754545 137 - 38779656 CAGCACAATAAATGACCAAGG----AACAAGTAAATTCttaactaaatatt--tcctctgtgctaggtaccacaattagtgctgagggcaaagcattacaaaggacaagctcaaggcccttacacacgtaagtcatgtgatcc i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13830421 121 + 39895921 TAGTACAAAAAGA------------CATTAATAAATAATTACTGA---ATAGTTCATCTGTGCTAGCTACCAAGACTGGTGCTGAAACA-AAGAACTACAAAGGACAAGCTATAGTCCCCA------CACAGCTATATGATTC i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=499250.000000 s hg38.chr21_KI270874v1_alt 90047 75 + 166743 TGTTTGGTGGTCTCAGACTTTTCTTTTTTACAGCACACAGGTTACATGTAAAACAACTGTTCCATCAGTAATGAG s panTro5.chr21 3715322 75 + 33445071 TGTTTGGTGGTCTCAGACTTTTCTTTTTTACAGCACACAGTTTACATGTAAAACAACTGTTCCATCAGTAATGAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341412 75 + 46275980 TGTTTGGTGGTCTCAGACTTTTCTTTTTTACAGCACACAGTTTACATGTAAAACAACTGTTCCATCAGTAATGAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280514 75 - 13858734 TGTTTGGTGGTCTCAGACTTTTCTTTTTTACAGCACACAGTTTACATGTAAAACAACTGTTCCATCAGTAATGAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463531 75 + 32716333 CATATGGTGGTCTCAGCCTTTTCTTTTTTACAGCACACAGTTTACATGTAAAACAACTGTTCCATCAGTAATGAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418694 75 - 185818997 TATGTGGTGGTCTCAGCCTTTTCTTTTTTACAGCACATAGTTTATATGTAAAAGAGCTGTTCCATCAGTAATGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162243264 75 - 192294377 TATGTGGTGGTCTCAGCCTTTTCTTTTTTACAGCACATAGTTTATATGTAAAAGAGCTGTTCCATCAGTAATGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8723950 75 + 9440265 TATGTGGTGGTCTCAGCCTTTTCTTTTTTACAGCACACAGTTTATATGTAAAAGAGCTGTTCCATCAGTAATGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453633 75 + 21915920 TATGTGGTGGTCTCAGCCTTTTCTTTTTTATAGCACACAGTTTATATGTAAAAGAGCTGTTCCATCAGTAATGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028484 75 - 90373283 TATGCAGTGGTCTCAGCCTTTTCTTTTTTACAGCACACAGTTTATATGTAAAACAGCTGTTCCATCAGTAATGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207910 75 + 4234846 TATGTGGTGGTCTCAGCCTTTTCTTTTTTATAGCACACAGTTTATATGTAAAAGAGCTGTTCCATCAGTAATGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211721 75 - 13750039 TACGTGGTGGTCTCAGCCTTTTCTTTTTTACAGCACACAGTTTATGTGTAAAACAACTGTTCCATCAGTAGTGAG i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20754682 72 - 38779656 catggagTGGTCGCAACTTTTTCTTTCTTACAGCATACAAGGT-CATAGAAAACAACCATTTCATCAGTAATG-- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13830542 73 + 39895921 TGTGTAGAGGCCTCAGACTTTTCTTTCTTACAACATATAACTTACATGTAAAACAACTGTTCCATTGGTAACA-- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e micMur3.chr31 19202548 460 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=334477.000000 s hg38.chr21_KI270874v1_alt 90122 43 + 166743 TCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCT----------ACTCCCC s panTro5.chr21 3715397 43 + 33445071 TCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCT----------ACTCCCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341487 43 + 46275980 TCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCT----------ACTCCCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280589 43 - 13858734 TCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCT----------ACTCCCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463606 43 + 32716333 TCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCT----------ACTCCCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418769 43 - 185818997 TCTCTTTACAGTAAATGATTTCTGCGAGTCTT-CCCT----------ACTCCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162243339 43 - 192294377 TCTCTTTACAGTAAATGATTTCTGCGAGTCTT-CCCT----------ACTCCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8724025 43 + 9440265 TCTCTTTACAGTAAATGATTTCTGCGAGTCTT-CCCT----------ACTCCCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453708 53 + 21915920 TCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCTTGATATGAACCCTTCCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028559 43 - 90373283 GCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCT----------ACTCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2207985 43 + 4234846 TCTCTTTACAGTAAATGATTTCTGTGAGTCTT-CCCT----------ACTCCCC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211796 43 - 13750039 TCTCTTTACAGTAAATGATTGCTGTGAGTCTT-CCCT----------ACTCCCC i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19203008 44 + 47401472 TCTCTTTACAGTCAGTGATTTCTGAGAGTCTTCCCCT----------ACTCTCC i micMur3.chr31 I 460 C 0 s otoGar3.GL873528 20754754 39 - 38779656 ----TTTCCAGTCAGTG-TTTCTGAGAGTCTTCCCCT----------TCTCTCC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13830615 44 + 39895921 TTTCTTTGCAGTCAATGATTTCCATGAACATTCCCCT----------ACTCctc i canFam3.chr31 C 0 I 304 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e mm10.chr16 78130292 762 + 98207768 I a score=3752318.000000 s hg38.chr21_KI270874v1_alt 90165 549 + 166743 AAGGGTTCATATCAGAATCTTTGAGAAATCATAATATTTGGGGTATTTTGAAAAGTTTCCACTTTGAGATTCTAATATGTG-TCC-CTTCTCCAAGGATATACTATCCCTAGTTGAGAATTACGGGTTTGGTGAGGCTTGGCGATGCTTGGGGACTGGAAAACAGAGAAAGAAGTAGAGACTGATATAGCAACTTGTATACTAGATTTAATTACAAAATCATAGCACACAAC---AAAAACTTGTATACAACAAAGTCATGTATAAAAATCCCTTAAACTT-CTGTGAAATACACTATAAATGGTTTCATATATAAAACT---ATATCCTATAACATCTGTATGTAAATGTGCTATGTATTCAAAGTTAAAGATCATCTATTCCCTT-AGACAGTTTATATTCATAAATTATAGCACAAGATTTGACAACTTGAAAA-GCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGAAAAAAAAA--TTATCTCTTTCTATAACTCTTCTAGTCAATGTTCTGCATTGT s panTro5.chr21 3715440 550 + 33445071 AAGGGTTCATATCAGAATCTTTGAGAAATCATAATATTTGGGGTATTTTGAAAAGTTTCCACTTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGTTGAGAATTACGGGTTTGGTGAGGCTTGGTGATGCTTGGGGACTGGAAAACAGAGAAAGAAGTAGAGACTGATATAGCAACTTGTATACTAGATTTAATTACAAAATCATAGCACACAAC---AAAAACTTGTATACAACAAAGTCATCTATAAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAATGGTTTCATATATGAAACT---ATATTCTACAACATCTGTATGTAAATGTGCTATGTATTCAAAGATAAAGATCATCTATTCCCTT-AGACAGTTTATATTCATAAATTATAGCACAAGATTTGACAACTTGAAAA-GCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGCAAAAAAAA-TTTATCTCTTTCTATAACTCTTCTAGTCAATGTTCTGAATTGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17341530 550 + 46275980 AAGGGTTCATATCAGAATCTTTGAGAAATCATAATATTTGGGGTATTTTGAAAAGTTTCCACTTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGTTGAGAATTACGGGTTTGGTGAGGCTTGGTGATGCTTGGGGACTGGAAAACAGAGAAAGAAGTAGAGACTGATATAGCAACTTGTATACCAGATTTAATTACAAAATCATAGCACACAAC---AAAAACTTGTATACAACAAAGTCATCTATAAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAATGGTTTCATATATGAAACT---ATATTCTACAACATCTGTATGTAAATGTGCTATGTATTCAAAGATAAAGATCATCTATTCCCTT-AGACAGTTTATATTCATAAATTATAGCACAAGATTTGACAACTTGAAAA-GCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGCAAAAAAAA-TTTATCTCTTTCTATAACTCTTCTAGTCAATGTTCTGAATTGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3280632 547 - 13858734 AAGGGTTCATATCAGAATCTTTGAGAAATCATAATATTTGGGGTATTTTGAAAAGTTTCCACTTTGAGATTCTAATATGTG-CCCTTTTCTCCAAGAATATACTATCCCTAGTTGAGAATTACGGGTTTGGTGAAGCTTGGTGATGCTTGGGGACTGGAAAACAGAGAAAGAAGTAGAGACTGATATAGCAACTTGTATACTAGATTTAATTACAAAATCATAGCACACAAC---AAAAACTTGTATACAACAAAGTCATCTATAAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAATGGTTTCATATATAAAACT---ATATCCTATAACATCTGCATGTAAATGTGCTATGTATTCAAAGAT---GATCATCTATTCCCTT-AGACAGTTTATATTCATAAATTATAGCACAAGATTTGACAACTTGAAAA-GCTTTAGCAAATGTATGAAAATATCAACCTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGCAAAAAAAT--TTATCTCTTTCTATAACTCTTCTAGTCAATGTTCTGAATTGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4463649 549 + 32716333 AAGAGTTCATATCAGAATCTTTGAGAAAACATAATATTTGGGGTATTTTGAAAAGTTTTGACTTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGTTGAGAATTACAGGTTTGGTGAGGCTCGTTGATGCTTGGGGACTGGAAAACAGAGAAAGAAGTAGAGACTGATACAGCAACTTGCATACTAGATTTAATTACAAAGTCATAGCACACAAC---AAAAACTTGTATACAACAAAGTCATCTATAAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAATGGTTTCACATATAAAACT---ATATTCTATAACATCTGTACATAAATGTGCTATGTATTCAAAGATAAAGATCATCTATTTCCTT-CGACAGTTTATATTCATAAATTATAGCACATGCTTTGACAACTTGAAAG-GCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGGCAAAAAAAT--TTGTCTCTTTCTATAACTCTTCTAGTCAATGTTCTGAATTGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155418812 546 - 185818997 AAGGGTTCATATCAGAATCTTTGAGAGATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGGAAAATAGAGAAAGAAGTAGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAAC---AAAAACTTGTACATGACAAAGTCTTCTATGAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAGT-GTTTCATATCTAAAACT---ATATTCTATAACATCTGTAAGTAAATGTGCTGTGTATTCAAAGACAAAAATCATCTATTTCCTT-AGACAGTTTGTATTCATAAATTATAGCACATGCTTTGACAACTTGAAAA-GCTTTAGCAAATGCATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGG--AAAAAAT--TTCTCTCTTTCTATCACTCTTCTAGTCAATGTTCTGAATTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162243382 546 - 192294377 AAGGGTTCATATCAGAATCTTTGAGAGATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGGAAAATAGAGAAAGAAGTAGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAAC---AAAAACTTGTACATGACAAAGTCTTCTATGAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAGT-GTTTCATATCTAAAACT---ATATTCTATAACATCTGTAAGTAAATGTGCTATGTATTCAAAGACAAAAATCATCTATTTCCTT-AGACAGTTTGTATTCATAAATTATAGCACATGCTTTGACAACTTGAAAA-GCTTTAGCAAATGCATGAAAATATCAACTTACTAGGTATTTCTAATTCTTATAATCATTTTTATCTTATGG--AAAAAAT--TTCTCTCTTTCTATCACTCTTCTAGTCAATGTTCTGAATTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8724068 546 + 9440265 AAGGGTTCATATCAGAATCTTTGAGAAATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGGAAAATAGAGAAAGAAGTAGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAAC---AAAAACTTGTACATGACAAAGTCTTCTATGAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAGT-GTTTCATATCTAAAACT---ATATTCTATAACATCTGTAAGTAAATGTGCTGTGTATTCAAAGACAAAAATCATCTATTTCCTT-AGACAGTTTGTATTCATAAATTATAGCACATGCTTTGACAACTTGAAAA-GCTTTAGCAGATACATGAAAATATCAATTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGG--AAAAAAT--TTCTCTCTTTCTATCACTCTTCTAGTCAATGTTCTGAATTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8453761 546 + 21915920 AAGGGTTCATATCAAAATATTTGAGAAATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCCAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGGAAAATAGAGAAAGAAGTAGAGATTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAAC---AAAAACTTGTACATGACAAAGTCTTCTATGAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAGT-GTTTCATATCTAAAACT---ATATTCTATAACATCTGTAAGTAAATGTGCTGTGTATTCAAAGACAAAAATCATCTATTTCCTT-AGACAGTTTATATTCATAAATTATAGCACATGCTTTGACAACTTGAAAA-GCTTTAGCAAATGCATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGG--AAAAAAT--TTCTCTCTTTCTATCACTCTTCTAGTCAATGTTCTGAATTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15028602 546 - 90373283 AAGGGTTCATATCAGAATCTTTGAGAAATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGCAAAATAGAGAAAGAAGTAGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAAC---AAAAACTTGTACATGACAAAGTCTTCTATGAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAAT-GTTTCATATCTAAAACT---ATATTCTATAACATCTGTAAGTAAATGTGCTGTGTATTCAAAGACAAAAATCACCTATTTCCTT-AGACAGTTTATATTCATAAATTATAGCACATGCTTTGACAACTTGAAAA-GCTTTAGCAAATGCATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGG--AAAAAAT--TTATCTCTTTCTATCACTCTTCTAGTCAATGTTCTGAATTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2208028 546 + 4234846 AAGGGTTCATATCAGAATCTTTGAGAAATGATAATATTGGGGGTATTTTGAAAAGTTTCCACCTTGAGATTCTAATATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGACGCTTGGGGACTGGAAAATAGAGAAAGAAGTAGAGACTGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACACAAC---AAAAACTTGTACATGACAAAGTCTTCTATGAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAGT-GTTTCATATCTAAAACT---ATATTCTATAACATCTGTAAGTAAATGTGCTGTGTATTCAAAGACAAAAATCATCTATTTCCTT-AGACAGTTTATATTCATAAATTATAGCTCATGCTTTGACAACTTGAAAA-GCTTTAGCAAATGCATGAAAATATCAACTTACTGGGTATTTCTATTTCTTATAATCATTTTTATCTTATGG--AAAAAAT--TTCTCTCTTTCTATCACTCTTCTAGTCAATGTTCTGAATTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 211839 544 - 13750039 AAGGGTTCATATCAGAATCTTTGAGAAATGATAATATTTGGGGTATTTTGAAAAGTTTTCATTTTGAGATTCTAGTATGTG-CCC-CTTCTCCAAGGATATACTATCCCTAGGTGAGAATTACAGGTTTGGTGAGGCTTGGTGATGCTTGGGGACTGGAAAATAGAGAAAGAAGTAGAGACGGTTATAGCAACTTGCATACTAGATTTAATTACAAAGTCGTAGCACAAAAC---AAAAACTTGTATATGACAAAGCCTTCTATGAAAATCCCTTAAACTT-CTGTGAAATACAGTATAAAT-GTTTCATATCTAAAACT---ATATTCTATAACATCTGTAAGTAAATGTGCTGTGTATTCAAAGACAAAAATCA--TATTTCCTT-AGACAGTTTATATTCATAAATTATAGCACATGCTTTGACAACTTGAAAA-GCTTTAGCAAATGTATGAAAATATCAACTTACTAGGTATTTCTATTTCTTATAATCATTTTTATCTTATGG--AAAAAAT--TTATCTCTTTCTATAACTCTTCCAGTCAATGTTCTGAATTGT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19203052 536 + 47401472 AAGGGTACAGATCAGAATCTTTGAGAAATCATGGTATTTGGGGTATTTTGAAAAATCTCCACCTTGAGATTCTGATATCTACCCC-CTTCCCCAAGGATATGCTATCCCCAGTTGAGAATCACAGGATTAGCGGGGCT-----------------TGGAAACTGGAAAACAAAGTAGAAACTGACACAGCAACCTGTATACAAGATTTAATTATAAAGTCATAACACAAAACAAAAAAAAACTATATATAAAAAAGTCATCCATAAAAATCCTGTAAATTCACTGTGAAATACAACATAAATGGTTTTATATGTAAAACTTTATTCTTCTGTAACATGTATATGTAAATGTGCTATGTATTTAATAATATAAAGCATCTATTTCCTT-AGAGA---AATAGTTAGAAAGTATAGCACCT--TTTAACAACTTCAAAATGCTTTAGCAAATTTATGAAAATGTCAACTTACTAGCTCTTCCTATTTCTTATAATCATTTTCATCTTATGG--AGAAAATGTTTATCTTTTTCTATAACTCTTCTAATCAATATTTTGAATTGT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20754793 524 - 38779656 CAGGTTACATATCAGAATCTTTGAGAAGTCATGGAATTTGAGGTATTTCATAATGTCTCCACTTTGAGATTCTGATATATA-CCC-CTTCCCCAAGGATATATCATCCCCAATTGAGAATCATGGGATTAGGTGGGCT-----------------TGGAAACTAGAGAACAAAGTAGAAAATGACATAGCTACTTGTATGCCAGATTTAATCCTAAAGTCATAACATAAGAC----AAATATTATGTACAAAAAAGTCATCCATAAAAAGTC-----ATTCACTGCAAACTATAGTATGAATGGTCTGATATGTACAACT---TTCTTCTGTCACAGATATATGTGAACATGCTATGTATTCAATAATATAAAGCATCTATTTCCTTGAGAGA--TCATATTCAGAAATTATAGCATAT--TTTAACAACTTCAAAATGCTATAACAAATTTATGAAAATATCAACTTATTGGCTCTTCCTCTTTTTCATAATCATTATCATCTTATGG--AG-AAATTTTTATCTGTTTCTATAACTCTTCTAATCAATATGTTGAATTGT i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78130292 762 + 98207768 I a score=679238.000000 s hg38.chr21_KI270874v1_alt 90714 99 + 166743 TCTCAGTGCAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGATC s panTro5.chr21 3715990 99 + 33445071 TCTCAGTGCAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGATC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342080 99 + 46275980 TCTCAGTGCAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGATC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281179 99 - 13858734 TCTCAGTGCAATATTTACTCCTGAACTGCCTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGATC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464198 99 + 32716333 TCTCAGTACAATATTTACTCCTGAACTGCTTTTATAAAGCCAGTATTATCTACCTGTCTAGCTGTGTAAACACTACAGTTCTCCTCTTTGCCAAAGGTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155419358 96 - 185818997 TCTCAGTACTATATTTACCCCAGAAGTGCTTTTAGAAAACCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTTGCCAAAGATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162243928 96 - 192294377 TCTCAGTACTATATTTACCCCAGAAGTGCTTTTAGAAAACCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTTGCCAAAGATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8724614 96 + 9440265 TCTCAGTACTATATTTACCCCAGAAGTGCTTTTAGAAAACCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTTGCCAAAGATT i macNem1.NW_012019910v1 C 0 I 317 s cerAty1.NW_012002954v1 8454307 96 + 21915920 TCTCAGTACAATATTTACCCCAGAACTGCTTTTAGAAAACCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTTGCCAAAGATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029148 96 - 90373283 TCTCAGTACAATATTTACCCCAGAACTGCTTTTAGAAAGCCAGCATTATCCACCTGTCTAGCTGTGTAAACACTACAGTT---CTCTTTGCCAAATATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2208574 96 + 4234846 TCTCAGTACAATATTTACCCCAGAACTGCTTTTAGAAAACCAGCATTATCCACCTGTCTAGCTGTGTAAACACTATAGTT---CTCTTTGCCAAAGATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212383 96 - 13750039 TCTCAGTACAATATTTACTCCTGAACTGCTTTCAGAAAGCCAGCATTATCCACCTGTCTAGCTGTGTAAACACGACAGTT---CTCTTTGCCAAAGATT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19203588 99 + 47401472 TCTCAGTACAATATTTATTCCTAGACTACTTTCAGAAGGCCATCATCATCCACCTGTCTAGAAACATAAATGCTACATTTCTCTTCTTTGCCAAATATA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20755317 98 - 38779656 TCTCAGTACAATATTTATTCCTAGACGACTTTCAGGA-GCTATCATAATCCACCTGTCTAGCAGCATAAACACTGTATTTCTCTTCTTTGCCAAAGACA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131054 76 + 98207768 TTTCAGTAGAACATTTATGCCTAGACCACTTTCAAAAGGCCATTATCAGCCACCTGCCTCAATGCTCAAACACTGC----------------------- i mm10.chr16 I 762 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I a score=632154.000000 s hg38.chr21_KI270874v1_alt 90813 88 + 166743 TAA-AAAAAGAAAATCCTTAATATAGTTCACAA----TTGTCTTTCGGCATGCAT--ACTGTTTCAGGCTTAAGTATATCCACAGCCTGAACACT s panTro5.chr21 3716089 88 + 33445071 TAA-AAAAAGAAAATCCTTAATATAGTTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCGGGCTTAAGTATATCCACAGCCTGAACACT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342179 88 + 46275980 TAA-AAAAAGAAAATCCTTAATATAGTTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCGGGCTTAAGTATATCCACAGCCTGAACACT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281278 88 - 13858734 TAA-AAAAAGAAAATCCTTAATATAATTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCGGGCTTAAGTATATCCACAGCCTGAACACT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464297 88 + 32716333 TAA-AAAAAGAAAATCCTCAATATAGTTCACAA----TTGTTTTTCAGCATGCAT--ACTGTTTCGGGCTTAAGTATATCCACAGCCTGAACACT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155419454 88 - 185818997 TAA-AAAAAGAAAATCCTCAATACAGTTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCAGGCTTAAGTATATACATAGCCTAAACACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244024 88 - 192294377 TAA-AAAAAGAAAATCCTCAATACAGTTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCAGGCTTAAGTATATACATAGCCTAAACACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725027 88 + 9440265 taa-aaaaagaaaaTCCTCAATACAGTTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCAGGCTTAAGTATATACATAGCCTAAACACT i macNem1.NW_012019910v1 I 317 C 0 s cerAty1.NW_012002954v1 8454403 88 + 21915920 TAA-AAAAAGAAAATCCTCAATACAGTTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCAGGCTTAAGTATATCCACAGCCTAAACACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029244 88 - 90373283 TAA-AAAAAGAAAATCCTCAATACAGTTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCAGGCTTAAGTATATCCACAGCCTAAACACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2208670 88 + 4234846 TAA-AAAAAGAAAATCCTCAATACAGTTCACAA----TTGTCTTTAGGCATGCAT--ACTGTTTCAGGCTTAAGTATATCCACAGCCTAAACACT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212479 88 - 13750039 TAA-AAAAAGAAAATCCTCAACACAGTTCACAA----TTTTCTTTAGGTATGCAT--ACTGTTTCAGGCTTAAGTATATCCACAGCCTAAACACT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19203687 93 + 47401472 -GA-AAAAAGAAAATGCTCAATATAATTCATAACTCTTTTTCTCTAGGTATGCATAGACTATTGTAGACTTCAGTGCATCCACAGCCTGAACAAT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20755415 94 - 38779656 -GAGAAAAAGAAAATCCTCAATGTAATTCACAAAGGTTTTTCTCTAGGTATTTATAGACTGTTTTGGACTTGAGTGCATACACAGCCTGAACACT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131130 61 + 98207768 ---------------CCTTGAC----CTTAGAA----CTGCCCTTGA----------ACTGTTTCAAGCCTAAGTGTATCCACAG-TTAAACACT i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3597771 0 - 6883506 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I a score=1314015.000000 s hg38.chr21_KI270874v1_alt 90901 161 + 166743 TTTGCCCCACCTTTTAAATTATTCTTCTCATTGGCAAGTAGATGTAGTCGAATGTGTATAAGTTATATGCCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCACGTAGAATATGCT-TAGA--TGCACAGAGGACAA s panTro5.chr21 3716177 161 + 33445071 TttgccccaccttttaaattattcttctcattggcaagtagatgtagttgaatgtgtataagttaaatgcctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCACGTAGAATATGCT-TAGA--TGCACAGAGGACAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342267 161 + 46275980 TttgccccaccttttaaattattcttctcattggcaagtagatgtagttgaatgtgtataagttaaatgcctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCACGTAGAATATGCT-TAGA--TGCACAGAGGACAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281366 161 - 13858734 TttgccccaccttttaaattattcttctcattggcaagtagatgtagttgaatatgtataagttaaatgcctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCACGTAGAATATGCT-TAGA--TGCACAGAGGACAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464385 161 + 32716333 TTTGCCCCACCTTTTAAATTATTCTTCTCATTGGCAAGTAGAtgtagttgaatgtgtataagttaaatgcctatctgatgctattccactgTGATTACAAGATAAATTAATAGTGCCTACAACAAAGGCACGTAGAATATGCT-TAGA--TGCACAGAGGACAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155419542 161 - 185818997 TttgccccaccttttaaattattcttctcgttggcaagtagatgtagttgaatgtgtataagttaaatacctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCT-TAGA--TACACAGAGGACAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244112 161 - 192294377 TTTGCCCCACCTTTTAAATTATTCTTCTCGTTGGCAAGTAGATGTAGTTGAATGTGTATAAGTTAAATACCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCT-TAGA--TACACAGAGGACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725115 161 + 9440265 TttgccccaccttttaaattattcttctcgttggcaagtagatgtagttgaatgtgtataagttaaatacctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCT-TAGA--TACACAGAGGACAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8454491 161 + 21915920 TTTGCCCCATCTTTTAAATTATTCTTCTCATTGGCAAGTAGAtgtagttgaatgtgtataagttaaatacctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCT-TAGA--TACACAGAGGACAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029332 161 - 90373283 TTTGCCCCACCTTTTAAATTATTCTTCTTGTTGGCAAGTAGATGTAGTTGAATGTGTATAAGTTAAATACCTATCTGATGCTATTCCACTGTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCT-TAGA--TACACAGAGGACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2208758 161 + 4234846 TttgccccaccttttaaattattcttctcattggcaagtagatgtagttgaatgtgtataagttaaatacctatctgatgctattccactgTGATTACAAGATAAATTAATGGTGCCTACAACAAAGGCCTGTAGAATGTGCT-TAGA--TACACAGAGGACAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212567 127 - 13750039 Tttgccccaccttttaaattattcttctctttggcaagtagatgtagttgaatgtgtataagttaaatgcctatctgatgccattccact----------------------------------AAGGCCTGTAGAATGTGCT-TAGA--TACACAGAGGACAA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19203780 162 + 47401472 TTTGCCCCACCTTTTAAATTATTCTTCTCATCAGCAAATAAATATAATTGAATTTCTGTAACCTAAATGCCCATTTGATGTTGTTTCACTGTAATAGCAAGATGAATTAAAGGTGTCTACAGCAAAAGCATGTAGAATGTGCTACCAA--TGCACAGAGGACAA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20755509 162 - 38779656 TTTACCCTGCCTTTGAAATTATTCTTCTCATTGGCAAACAGACACAATTGACTTTGTGTAAGTTAAATGCCCCTCTGAGGCTGTTCCACTGTAATTATAAGACAAATTAATGGTGTCTCCAGCCGAAGCGTGTAGCATGTGCTACTGA--TGCACAGAGGACAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131191 151 + 98207768 TTTACCCCACCACTTAAATTATTCTTAATAATAGC----AGGTTTAGTTTAATTTGTG--AGTTTAAGACTTAGTATGAGTTGTTCTTCTGTAATGAC-AGATAAACTTATAAGATCTACAACAAAAA-----AGAATAATTT-TACAACTACACAAAGAATAA i mm10.chr16 C 0 I 292 s dasNov3.JH568778 3597771 161 - 6883506 TCTGCCCCACCTTTTATATTATTCCTCTTGTAGGCAA-TAAATGTAGTTGAATTTGGATAAGATAAATGTCCATGTGAAATTATTCCATTGTGATTAGGAGATAAATTAATGGTGTCTACAGAAAAAGTATGTACAATGAGATACAGA--CACCCTGAGAAAAA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I a score=552195.000000 s hg38.chr21_KI270874v1_alt 91062 81 + 166743 AGCCACTAGATCTTTGAAGAAGAAATTGAAAAAAGCATCACCATGGAGATAATATTTGGAACAGTGAAG----------AAACTAACAGTT s panTro5.chr21 3716338 81 + 33445071 AGCCACTAGATCTTTAAAGAAGAAATTGAAAAAAGCATCACCAAGGAGATAATACTTGGAACAGTGAAG----------AAACTAACAGTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342428 81 + 46275980 AGCCACTAGATCTTTAAAGAAGAAATTGAAAAAAGCATCACCAAGGAGATAATACTTGGAACAGTGAAG----------AAACTAACAGTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281527 81 - 13858734 AGCCACTAGATCTTTAAAGAAGAAATTGAAAAAAGCATTACCAAGGAGATAATATTTGGAATAGTGAAG----------AAACTAACAGTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464546 81 + 32716333 AGCCGCCAGATCTTTAAAGAAGAAATTGAAAAAAGCATCACCAAGGAGATAATATTTGGAATAGTGAAG----------AAACTAACAGTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155419703 81 - 185818997 AGTGACTAGCTCCTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGAGGTAACATTTGGAATAGTGAAG----------AAACTGACAGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244273 81 - 192294377 AGTGACTAGCTCCTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGAGGTAACATTTGGAATAGTGAAG----------AAACTGACAGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725276 81 + 9440265 AGTGACTAGCTCCTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGAGGTAACATTTGGAATAGTGAAG----------AAACTGACAGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8454652 81 + 21915920 AGTGACTAGCTCTTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGACGTAATATTTGGAATAGTGAAG----------AAACTGACAGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029493 81 - 90373283 AGTGACTAGCTCTTTAAAGAAGAGATTGAAAAAAGTATCACCAAGGAGGTAATATTTGGAATAGTGAAG----------AAACTGACAGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2208919 81 + 4234846 AGTGACTAGCTCTTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGAGGTAATATTTGGAATAGTGAAG----------AAACTGACAGTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212694 81 - 13750039 AGTGACTAGCTCTTTAAAGAAGAGATTGAAAAAAGCATCACCAAGGAGGTAATATTTAGAATAGTGAAG----------AAACTGACAGTT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19203942 81 + 47401472 ATCCACTAGATCTTTCAAGGAAAAAATGGGAAAAACATTGCCAATAAGTTAATATTTGTAATGTTGAAG----------AAACTAATAGTT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20755671 63 - 38779656 AACCACTAGATCGTTCATGGAGAAAGGGAGA------------------CAATATTTGGAATACTGAAG----------GAACTAACAGTT i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3597932 89 - 6883506 AGCTACCAACTGACTCGTGGAGGAATC--AGGAAGTGTCATGAAGGAGATAATATTTAGAGTTTTGAAGAATATAGAGAAAATAAACAGTT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I a score=7101.000000 s hg38.chr21_KI270874v1_alt 91143 4 + 166743 AAAG s panTro5.chr21 3716419 4 + 33445071 AAAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342509 4 + 46275980 AAAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281608 4 - 13858734 AAAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464627 4 + 32716333 AAAG i nomLeu3.chr25 C 0 C 0 s micMur3.chr31 19204023 4 + 47401472 AAAG i micMur3.chr31 C 0 C 0 s dasNov3.JH568778 3598021 4 - 6883506 GAAG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e otoGar3.GL873528 20755734 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212775 0 - 13750039 C e cerAty1.NW_012002954v1 8454733 0 + 21915920 C e macNem1.NW_012019910v1 8725357 0 + 9440265 C e manLeu1.NW_012102865v1 2209000 0 + 4234846 C e chlSab2.chr2 15029574 0 - 90373283 C e macFas5.chr3 162244354 0 - 192294377 C e rheMac8.chr3 155419784 0 - 185818997 C a score=4230.000000 s hg38.chr21_KI270874v1_alt 91147 3 + 166743 ATG s panTro5.chr21 3716423 3 + 33445071 ATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342513 3 + 46275980 ATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281612 3 - 13858734 ATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464631 3 + 32716333 ATG i nomLeu3.chr25 C 0 C 0 s micMur3.chr31 19204027 3 + 47401472 ATG i micMur3.chr31 C 0 I 4 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598025 0 - 6883506 C e otoGar3.GL873528 20755734 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212775 0 - 13750039 C e cerAty1.NW_012002954v1 8454733 0 + 21915920 C e macNem1.NW_012019910v1 8725357 0 + 9440265 C e manLeu1.NW_012102865v1 2209000 0 + 4234846 C e chlSab2.chr2 15029574 0 - 90373283 C e macFas5.chr3 162244354 0 - 192294377 C e rheMac8.chr3 155419784 0 - 185818997 C a score=241036.000000 s hg38.chr21_KI270874v1_alt 91150 269 + 166743 TCAATGGAAggccgggtgcagtggttcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaaattacaaaaattatctgggtatggtgg--tatgcacctataatccgagctacttgggatgctgaggcaggaggatggcttgagccctggaggcagagattgcagtgagccgagatcacaccattgcactccagcctg s panTro5.chr21 3716426 271 + 33445071 TCAATGGAAggccgggtgcagcggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaaattacaaaaattatctgagtatggtggtatatgcacctataatccgagctacttgggatgctgaggcaggagaatggcttgagccctggaggcagagattgcagtgagccgagatcacaccattgcactccagcctg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342516 271 + 46275980 TCAATGGAAggccgggtgcagcggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaaaaattacaaaaattatctgagtatggtggtatatgcacctataatccgagctacttgggatgctgaggcaggagaatggcttgagccctggaggcagagattgcagtgagccgagatcacaccattgcactccagcctg i panPan2.chr21 C 0 I 22 s gorGor5.CYUI01015003v1 3281615 269 - 13858734 TCAATGGAAggccggatgcagtggctcacacctgtaatcccagcactttgggaggctgaggcagttggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccacctctactaaaaaattacaaaaattatctgggtatggtgg--tatgcacctataatccgagctacttgggatgctgaggcaggagaatggcttgagccctggaggcagagattgcagtgacccgagatcacaccattgcactccagcctg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464634 269 + 32716333 CCAATGGAAggtcaggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccaacctgaacaacatggtgaaaccccatctctactaaaaaattacaaaaactatctgggtatggtgg--tatgtgcctataatccgagctacttgggaggctgaggcaggagaattgcttgagccctggaggcagagattgcagtgagccgagatcacaccattgcactccagcctg i nomLeu3.chr25 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598025 0 - 6883506 C e micMur3.chr31 19204030 4 + 47401472 I e otoGar3.GL873528 20755734 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212775 0 - 13750039 C e cerAty1.NW_012002954v1 8454733 0 + 21915920 C e macNem1.NW_012019910v1 8725357 0 + 9440265 C e manLeu1.NW_012102865v1 2209000 0 + 4234846 C e chlSab2.chr2 15029574 0 - 90373283 C e macFas5.chr3 162244354 0 - 192294377 C e rheMac8.chr3 155419784 0 - 185818997 C a score=13940.000000 s hg38.chr21_KI270874v1_alt 91419 46 + 166743 tgcaactagagcaaaactcttctcaaaaaaaaaaaaaaaaaaaaaa s panTro5.chr21 3716697 37 + 33445071 tgcaactagagcaaaactcctctc---------aaaaaaaaaaaaa i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281884 32 - 13858734 tgcaactagagcaaaactcctctc--------------aaaaaaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464903 45 + 32716333 tgcaactagagcaatactcctcta-aaaaaaaaaaaaaaaaataaa i nomLeu3.chr25 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598025 0 - 6883506 C e micMur3.chr31 19204030 4 + 47401472 I e otoGar3.GL873528 20755734 0 - 38779656 C e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212775 0 - 13750039 C e cerAty1.NW_012002954v1 8454733 0 + 21915920 C e macNem1.NW_012019910v1 8725357 0 + 9440265 C e manLeu1.NW_012102865v1 2209000 0 + 4234846 C e chlSab2.chr2 15029574 0 - 90373283 C e macFas5.chr3 162244354 0 - 192294377 C e rheMac8.chr3 155419784 0 - 185818997 C e panPan2.chr21 17342787 22 + 46275980 I a score=910.000000 s hg38.chr21_KI270874v1_alt 91465 1 + 166743 a s panTro5.chr21 3716734 1 + 33445071 a i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281916 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464948 1 + 32716333 a i nomLeu3.chr25 C 0 C 0 s otoGar3.GL873528 20755734 1 - 38779656 A i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598025 0 - 6883506 C e micMur3.chr31 19204030 4 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212775 0 - 13750039 C e cerAty1.NW_012002954v1 8454733 0 + 21915920 C e macNem1.NW_012019910v1 8725357 0 + 9440265 C e manLeu1.NW_012102865v1 2209000 0 + 4234846 C e chlSab2.chr2 15029574 0 - 90373283 C e macFas5.chr3 162244354 0 - 192294377 C e rheMac8.chr3 155419784 0 - 185818997 C e panPan2.chr21 17342787 22 + 46275980 I a score=18018.000000 s hg38.chr21_KI270874v1_alt 91466 3 + 166743 aaa s panTro5.chr21 3716735 3 + 33445071 aaa i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281917 3 - 13858734 aaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464949 3 + 32716333 aaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155419784 3 - 185818997 AAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244354 3 - 192294377 AAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725357 3 + 9440265 AAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8454733 3 + 21915920 AAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029574 3 - 90373283 AAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209000 3 + 4234846 AAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212775 3 - 13750039 AAA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20755735 3 - 38779656 AAA i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598025 0 - 6883506 C e micMur3.chr31 19204030 4 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e panPan2.chr21 17342787 22 + 46275980 I a score=39275.000000 s hg38.chr21_KI270874v1_alt 91469 8 + 166743 GATGTCAA s panTro5.chr21 3716738 8 + 33445071 GATGTAAA i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281920 8 - 13858734 GATGTCAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464952 8 + 32716333 GATGTCAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155419787 8 - 185818997 GATGTCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244357 8 - 192294377 GATGTCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725360 8 + 9440265 GATGTCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8454736 8 + 21915920 GATGTCAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029577 8 - 90373283 GATGTCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209003 8 + 4234846 GATGTCAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212778 8 - 13750039 GATGTCAA i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20755738 8 - 38779656 GACAGCCG i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3598025 8 - 6883506 AATGGTGG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204030 4 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e panPan2.chr21 17342787 22 + 46275980 I a score=694320.000000 s hg38.chr21_KI270874v1_alt 91477 108 + 166743 TGGAGGTAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAGAGGCATAAAAGAATATAGTACGTTTAGGAAATGGTGATAAGTTTGAATCATTAAAGGAAAGTA s panTro5.chr21 3716746 108 + 33445071 TGGAGGTAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAGAGGCATAAAAGAATATAGTATGTTTAGGAAATGGTGATAAGTTTGAATCATTAAAGGAAAGTA i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3281928 108 - 13858734 TGGAGGTAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAGAGGCATAAAAGAATATAGTATGTTTAGTAAATGGTGATAAGTTTGAATCATTAAAGGAAAGTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4464960 105 + 32716333 TGGAGGTAGATCAGATACTCTA-GCAAAAAC--AAATAAATATAAGAGGCATAAAAG-ATATAGTATGTTTAGGAAATGATGATAAGTTTGAATCATTAAAGGAAAGTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155419795 107 - 185818997 TGGAGACAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATCGTATGTTTAGG-AATGACGATAAGTTTGAATCATTAAAGAAAAGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244365 107 - 192294377 TGGAGACAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATCGTATGTTTAGG-AATGATGATAAGTTTGAATCATTAAAGAAAAGTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725368 107 + 9440265 TGGAGACAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATCGTATGTTTAGG-AATGATGATAAGTTTGAATCATTAAAGAAAAGTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8454744 107 + 21915920 TGGAGACAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATAGTATGTTTAGG-AATGATGATAAGTTTGAATCATTAAAGAAAAGTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029585 107 - 90373283 TGGAGACAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATAGTATGTTTAGG-AATGATGATAAGTTTGAATCATTAAAGAAAAGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209011 107 + 4234846 TGGAGACAGGTCAGATACTCTA-GCAAAAACATAAATAAATATAAAAGGCATAAAAGAATATAGTATGTTTAGG-AATGATGATAAGTTTGAATCATTAAAGAAAAGTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212786 107 - 13750039 TGGAGGCAGGTCAGATACTCTA-GCAAAATCATAAATAAATATAAAAGGCATAAAAGAATATAGTATGTTTAGG-AATGATGATAAGTTTGAATCGTTAAAGAAAAGTA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19204034 108 + 47401472 TGGAGGTAGGTCAGGCATTCTG-GCAAAAATATAAATGAATAAAAGAGGCATAAAAGAATACAGTATGTCTGGGAAACGATGATAAGTCTGAATCATTAAAGAAAAGTA i micMur3.chr31 I 4 C 0 s otoGar3.GL873528 20755746 102 - 38779656 TGGAGGTCAGTCAGGCATTCTG-GCAAAAATATAAATGAACAAAGGAAGTAT-----AATACAGAATGT-TGGGAAATGATGAAAAGTCGGAATCATTCAAGGAAAGCA i otoGar3.GL873528 C 0 I 269 s dasNov3.JH568778 3598033 109 - 6883506 TATATGTAGGTTGAGCATTCTGTGCAAAAACGTAAATGAATAAAAGAGATATAAAAGAGGACACTATCTTTGGGAAATGATAAAAAGACTGAATCATCAAAGAAAAAGA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e panPan2.chr21 17342787 22 + 46275980 I a score=48648.000000 s hg38.chr21_KI270874v1_alt 91585 7 + 166743 TGTTGGT s panTro5.chr21 3716854 7 + 33445071 TGTTGGT i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282036 7 - 13858734 TGTTGGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465065 7 + 32716333 TGTTAGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155419902 7 - 185818997 TGTTGGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244472 7 - 192294377 TGTTGGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725475 7 + 9440265 TGTTGGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8454851 7 + 21915920 TGTTGGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029692 7 - 90373283 TGTTGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209118 7 + 4234846 TGTTGGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212893 7 - 13750039 TGTTGGT i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19204142 7 + 47401472 TGTTGGT i micMur3.chr31 C 0 I 676 s dasNov3.JH568778 3598142 7 - 6883506 TATTGGT i dasNov3.JH568778 C 0 I 569 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e otoGar3.GL873528 20755848 269 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e panPan2.chr21 17342787 22 + 46275980 I a score=337626.000000 s hg38.chr21_KI270874v1_alt 91592 67 + 166743 ccaggctctgtggctcatgcctgtaatccaagcactttgggaggctaaggtgggcagatcacttgag s panTro5.chr21 3716861 67 + 33445071 ccaggctctgtggctcatgcctgtaatccaagcactttgggaggctaaggtgggcagatcacttgag i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282043 67 - 13858734 ccaggctctgtggctcatgcctgtaatcccagcactttgggaggctaaggtgggcagatcacttgag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465072 66 + 32716333 ccaggctctgtggctcatgcctgt-atccaagcactttgggacgctgaggtgggcggatcacttgag i nomLeu3.chr25 C 0 I 126 s rheMac8.chr3 155419909 67 - 185818997 ccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244479 67 - 192294377 ccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725482 67 + 9440265 ccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8454858 67 + 21915920 ccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029699 67 - 90373283 ccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209125 67 + 4234846 ccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212900 67 - 13750039 ccaggctctgtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacttgag i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598149 569 - 6883506 I e micMur3.chr31 19204149 676 + 47401472 I e otoGar3.GL873528 20755848 269 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e panPan2.chr21 17342787 22 + 46275980 I a score=96204.000000 s hg38.chr21_KI270874v1_alt 91659 24 + 166743 gtcaggagttcaagatcagcctgg s panTro5.chr21 3716928 24 + 33445071 gtcaggagttcaagatcagcctgg i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282110 24 - 13858734 gtcaggagttcaagatcagcctgg i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155419976 24 - 185818997 gtcaggagttcaagaccagcctgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244546 24 - 192294377 gtcaggagttccagacgagcccgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725549 24 + 9440265 gtcaggagttcaagaccagcctgg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8454925 24 + 21915920 gtcaggagttcaagaccagcctgg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029766 24 - 90373283 gtcaggagttcaagaccagcctgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209192 24 + 4234846 gtcaggagttcaagaccagcctgg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 212967 24 - 13750039 gtcaggagttcaagaccagcctgg i colAng1.NW_012120598v1 C 0 M 615 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598149 569 - 6883506 I e micMur3.chr31 19204149 676 + 47401472 I e otoGar3.GL873528 20755848 269 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e nomLeu3.chr25 4465138 126 + 32716333 I e panPan2.chr21 17342787 22 + 46275980 I a score=75337.000000 s hg38.chr21_KI270874v1_alt 91683 28 + 166743 caaacacgatgaaaccctgtctctact-a s panTro5.chr21 3716952 29 + 33445071 caaacatggtgaaaccctgtctctactaa i panTro5.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282134 28 - 13858734 caaacacggtgaaaccctgtctctact-a i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155420000 28 - 185818997 tcaatatggtgaaaccctgtctctact-t i rheMac8.chr3 C 0 I 5 s macFas5.chr3 162244570 28 - 192294377 tcaatatggtgaaaccctgtctctact-t i macFas5.chr3 C 0 I 5 s macNem1.NW_012019910v1 8725573 28 + 9440265 tcaatatggtgaaaccctgtctctact-t i macNem1.NW_012019910v1 C 0 I 5 s cerAty1.NW_012002954v1 8454949 28 + 21915920 tcaatatggtgaaaccctgtctccact-t i cerAty1.NW_012002954v1 C 0 I 5 s chlSab2.chr2 15029790 28 - 90373283 tcaatatggtgaaaccctgtctctact-t i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012102865v1 2209216 28 + 4234846 tcaatatggtgaaaccctgtctccact-t i manLeu1.NW_012102865v1 C 0 I 6 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598149 569 - 6883506 I e micMur3.chr31 19204149 676 + 47401472 I e otoGar3.GL873528 20755848 269 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212991 615 - 13750039 M e nomLeu3.chr25 4465138 126 + 32716333 I e panPan2.chr21 17342787 22 + 46275980 I a score=117761.000000 s hg38.chr21_KI270874v1_alt 91711 37 + 166743 aaaaaaaataaaa------------ttagccaagcatgctggcggtcac s panTro5.chr21 3716981 37 + 33445071 aaaaaaaataaaa------------ttagccaggcatgctggcggtcac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342809 37 + 46275980 aaaaaaaataaaa------------ttagccaggcatgctggcggtcac i panPan2.chr21 I 22 C 0 s gorGor5.CYUI01015003v1 3282162 37 - 13858734 aaaaaaaataaaa------------ttagccaggcatgctggtggtcac i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155420033 37 - 185818997 aaaaaaaaaaaaa------------ttagccgggcatggtggtgggcac i rheMac8.chr3 I 5 C 0 s macFas5.chr3 162244603 36 - 192294377 aaaaaaaaaaaaa-------------tagccgggcatggtggtgggcac i macFas5.chr3 I 5 C 0 s macNem1.NW_012019910v1 8725606 49 + 9440265 aaaaaaaaaaaaaaaaaaaaaaaaattagccgggcatggtggtgggcac i macNem1.NW_012019910v1 I 5 C 0 s cerAty1.NW_012002954v1 8454982 34 + 21915920 aaaaaaaaaa---------------ttagccgggcatggtggtgggcac i cerAty1.NW_012002954v1 I 5 C 0 s chlSab2.chr2 15029819 37 - 90373283 aaaaaaaaaaaaa------------ttagccgggcatggtggtgggcac i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012102865v1 2209250 37 + 4234846 aaaaaaaaaaaaa------------ttagccgggcatggtggtgggcac i manLeu1.NW_012102865v1 I 6 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598149 569 - 6883506 I e micMur3.chr31 19204149 676 + 47401472 I e otoGar3.GL873528 20755848 269 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212991 615 - 13750039 M e nomLeu3.chr25 4465138 126 + 32716333 I a score=255967.000000 s hg38.chr21_KI270874v1_alt 91748 51 + 166743 ctgtaatcccagctactcaggagtctgaggcagggaaagttgcttgaacat s panTro5.chr21 3717018 51 + 33445071 ctgtaatcccagctactcaggaggctgaggcagggaaagttgcttgaacat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342846 51 + 46275980 ctgtaatcccagctactcaggaggctgaggcagggaaagttgcttgaacat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282199 51 - 13858734 ctgtaatcccagctactcaggaggttgaggcagggaaagttgcttgaacat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465264 51 + 32716333 ctgtaatcccagctattcaggaggctgaggcagggaaagttgcttgaacat i nomLeu3.chr25 I 126 C 0 s rheMac8.chr3 155420070 51 - 185818997 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244639 51 - 192294377 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725655 51 + 9440265 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455016 51 + 21915920 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029856 51 - 90373283 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209287 51 + 4234846 ctgtaatcccagctactcaggaaactgaggcagggaaagttgcttgaacat i manLeu1.NW_012102865v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3598149 569 - 6883506 I e micMur3.chr31 19204149 676 + 47401472 I e otoGar3.GL873528 20755848 269 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212991 615 - 13750039 M a score=300751.000000 s hg38.chr21_KI270874v1_alt 91799 58 + 166743 gggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggccaca s panTro5.chr21 3717069 58 + 33445071 gggaggcagacgttgcaatgagccaagaccaggccactgtactccagcctgggccaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342897 58 + 46275980 gggaggcagacgttgcaatgagccaagaccaggccactgtactccagcctgggccaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282250 58 - 13858734 gggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggccaca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465315 58 + 32716333 gggaggcagatgttgcaatgagccaagaccagaccactgtactccagcctgggccaca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420121 58 - 185818997 gggaggcagatgttgcaatgagccaagaccaggccactatactccagcctgggccaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244690 58 - 192294377 gggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggccaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725706 58 + 9440265 gggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggccaca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455067 58 + 21915920 gggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctgggccaca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029907 58 - 90373283 gggaggcagatgttgcaatgagccaagaccaggccactgtactccagcctaggccaca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209338 58 + 4234846 gggaggcagatgttgcaatgagccaagaccaggccactgtactccagcccgggccaca i manLeu1.NW_012102865v1 C 0 C 0 s dasNov3.JH568778 3598718 54 - 6883506 agaagacaagcaagacagcaagctgacacaatgggttggcatgacagactgg----ca i dasNov3.JH568778 I 569 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204149 676 + 47401472 I e otoGar3.GL873528 20755848 269 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212991 615 - 13750039 M a score=92530.000000 s hg38.chr21_KI270874v1_alt 91857 18 + 166743 gagcaagattg----tgtctca s panTro5.chr21 3717127 18 + 33445071 gagcaagattc----tgtctca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342955 18 + 46275980 gagcaagattc----tgtctca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282308 18 - 13858734 gagcaagattc----tgtctca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465373 18 + 32716333 gagcaagactc----tgtctca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420179 18 - 185818997 gagcaagactc----tgtctca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244748 18 - 192294377 gagcaagactc----tgtctca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725764 18 + 9440265 gagcaagactc----tgtctca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455125 18 + 21915920 gagcaagactc----tgtctca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029965 18 - 90373283 gagcaagactc----tgtctca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209396 18 + 4234846 gagcaagactc----tgtctca i manLeu1.NW_012102865v1 C 0 C 0 s otoGar3.GL873528 20756117 22 - 38779656 aagcatgacttaccaggtctcg i otoGar3.GL873528 I 269 C 0 s dasNov3.JH568778 3598772 18 - 6883506 cagcaagctga----tacaaca i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204149 676 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e mm10.chr16 78131342 292 + 98207768 I e colAng1.NW_012120598v1 212991 615 - 13750039 M a score=404041.000000 s hg38.chr21_KI270874v1_alt 91875 111 + 166743 aaaaataaaa----aaaaaaaaaaagaaagaaaAGAAAAGTATGTTGGTGAGTATATCTGGAG---AGATTTGTC---AAAAACAATGGAACTAATAAAGTACAAATGGAACCAATAAAAT s panTro5.chr21 3717145 112 + 33445071 aaaaat--aa----aaaaaaagaaagaaagaaaaGAAAAGTATGTTGGTGAGTATATCTGGAGAGAAGATTTGTC---AAAAAAAATGGAACTAATAAAGTACAAATGGAACCAATAAAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17342973 110 + 46275980 aaaaat--------aaaaaaagaaagaaagaaaagaaAAGTATGTTGGTGAGTATATCTGGAGAGAAGATTTGTC---AAAAAAAATGGAACTTATAAAGTACAAATGGAACCAATAAAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282326 112 - 13858734 aaaga---------aaaaaaaaaaagaaagaaaagaaaAGTATGTTGGTGAGTATATCTGGAGAGAAGATTTGTCAAAAAAAAAAATGGAACTAATAAAGTACAAATGGAACCAATAAAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465391 107 + 32716333 aaaaat----------aaaaaaaaagaaGGAAAAGAAAAGTATGTTGATGAGTATATCTGGAGAGAAGATTTGTC----AAAAAAATGGAATTAATAGAGTACAAATGGAACAAATAAAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420197 103 - 185818997 aaaaat---------aaaaaaaaaag-----aaagaaaaGTATGTTGATGAGTATATCTGGAGAGAAGATTTGTC----CAAAAAATGGAACTAATAAAGTACAAATGGAACCAATAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244766 103 - 192294377 aaaaat---------aaaaaaaaaag-----aaagaaaaGTATGTTGATGAGTATATCTGGAGAGAAGATTTGTC----CAAAAAATGGAACTAATAAAGTACAAATGGAACCAATAAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725782 103 + 9440265 aaaaat---------aaaaaaaaaag-----aaagaaaaGTATGTTGATGAGTATATCTGGAGAGAAGATTTGTC----AAAAAAATGGAACTAATAAAGTACAAATGGAACCAATAAAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455143 104 + 21915920 aaaaat----------aaaaaaaaag-----aaagaaaaGTATGTTGATGAGTATATCTGGAGAGAAGATATGTC--AAAAAAAAATGGAACTAATAAAGTACAAATGGAACCAATAAAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15029983 102 - 90373283 aaaaat-----------aaaaaaaag-----aaagaaaaGTATGTTGATGACTATATCTGGAGAGAAGATTTGTC---AAAAAAAGTGGAACTAATAAAGTACAAATGGAACCAATAAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209414 105 + 4234846 aaaaat----------aaaaaaaaag-----aaagaaaaGTATGTTGATGAGTATATCTGGAGAGAAGATATGTC-AAAAAAAAAATGGAACTAATAAAGTACAAATGGAACCAATAAAAT i manLeu1.NW_012102865v1 C 0 C 0 s otoGar3.GL873528 20756139 97 - 38779656 aagaaaggaatttggggaagagaaaa-----caaatcagttcagtcctcaAGTG-ATTTGGAGGGGAAA--AACC----------------CTAATACAGTACACATGCACCCAACAAAAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131634 92 + 98207768 agagag--------agagagagagag-----acagagagacagagagacagagagacagagagagagag----------agagaTTTGGGATGAATA-ATTACA-----AACCAGTAAAAC i mm10.chr16 I 292 C 0 s dasNov3.JH568778 3598790 85 - 6883506 --------------agatgatgcaat-----gaagagacacaaggaggaaaacacaatgagagaca--------c---aacaagcagggaactgagatggctcaagtg------attaggc i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204149 676 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I e colAng1.NW_012120598v1 212991 615 - 13750039 M a score=102218.000000 s hg38.chr21_KI270874v1_alt 91986 17 + 166743 AAACTATTCCTAGACTG s panTro5.chr21 3717257 17 + 33445071 AAACTATTCCTAGACTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343083 17 + 46275980 AAACTATTCCTAGACTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282438 17 - 13858734 AAACTATTCCTAGACTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465498 17 + 32716333 AAACTATTCCTAGACTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420300 17 - 185818997 AAACTGTTCCTAGACTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244869 17 - 192294377 AAACTGTTCCTAGACTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725885 17 + 9440265 AAACTGTTCCTAGACTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455247 17 + 21915920 AAACTGTTCCTAGACTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030085 17 - 90373283 AAACTGTTCCTAGACTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209519 17 + 4234846 AAACTATTCCTAGACTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213607 17 - 13750039 AAACTGTTCCTAGACTA i colAng1.NW_012120598v1 M 615 C 0 s otoGar3.GL873528 20756236 17 - 38779656 AAACAGCTCCTAGATCA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131726 15 + 98207768 --AGTGATCTCACAGCA i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3598875 14 - 6883506 acctagctcccaaa--- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204149 676 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I a score=293679.000000 s hg38.chr21_KI270874v1_alt 92003 35 + 166743 TGGTAAGTTTCACATGCTCT-----------------GAGAAGGCATATAGA s panTro5.chr21 3717274 35 + 33445071 TGGTAAGTTTCACATGCTCT-----------------GAGAAGGCATATAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343100 35 + 46275980 TGGTAAGTTTCACATGCTCT-----------------GAGAAGGCATATAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282455 35 - 13858734 TGGTAAGTTTCACATGCTCT-----------------GAGAAGGCATATAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465515 35 + 32716333 TGGTAAGTTTCACATGCTCT-----------------GAGAAGGCATATAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420317 35 - 185818997 TGGTAAGTTTCACATGCTCT-----------------GAGAAGACATATAGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244886 35 - 192294377 TGGTAAGTTTCACATGCTCT-----------------GAGAAGACATATAGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725902 35 + 9440265 TGGTAAGTTTCACATGCTCT-----------------GAGAAGACATATAGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455264 35 + 21915920 TGGTAAGTTTCACATGCTCT-----------------GAGAAGACATATAGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030102 35 - 90373283 TGGTAAGTTTCACATGCTCT-----------------GAGAAGACATATAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209536 35 + 4234846 TGGTAAGTTTCACATGCTCT-----------------GAGAAGACATATAGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213624 35 - 13750039 TGGTAAGTTTCACATGCTCT-----------------GAGAAGACATATAGA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19204825 35 + 47401472 TGGCAAGTTTCACATGCTTT-----------------GAGAAGGCATATAGA i micMur3.chr31 I 676 I 110 s otoGar3.GL873528 20756253 29 - 38779656 AGGTAAACTCTCCATGCCCT-----------------GAGAAGGAA------ i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131741 35 + 98207768 TAGCAAGTCTCATATGCTTT-----------------GAGAAGACTTGTACA i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3598889 52 - 6883506 tggtaggtcccacgttcagttcccagtgcctcctaaaaagaagacgaacaga i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I a score=500076.000000 s hg38.chr21_KI270874v1_alt 92038 81 + 166743 TATAG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGC-TTTTTTT----- s panTro5.chr21 3717309 81 + 33445071 TATAG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGC-TTTTTTT----- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343135 81 + 46275980 TATAG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGC-TTTTTTT----- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282490 81 - 13858734 TATAG-------------------------------------ACTTTATATTATCATCAAAAGGTAACCAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGC-TTTTTTT----- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465550 81 + 32716333 TATAG-------------------------------------ACTTTGTATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAAAGAGTAATATGGTTA--TGTTTTGC-TTTTTTT----- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420352 81 - 185818997 TATGG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAATGAGCAACAAGGTAA--TGTTTTGC-TTTTTTT----- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162244921 81 - 192294377 TATGG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAATGAGCAACAAGGTAA--TGTTTTGC-TTTTTTT----- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8725937 81 + 9440265 TATGG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAATGAGCAACAAGGTAA--TGTTTTGC-TTTTTTT----- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455299 81 + 21915920 TATGG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTTACATGAGGAGTTAATCAATGAGCAACAAGGTAA--TGTTTTGC-TTTTTTT----- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030137 81 - 90373283 TATGG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAATGAGCAACAAGGTTA--TGTTTTGC-TTTTTTT----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209571 82 + 4234846 TATGG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTTACATGAGGAGTTAATCAATGAGCAACAAGGTAA--TGTTTTGCTTTTTTTT----- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213659 81 - 13750039 TATGG-------------------------------------ACTTTATATTATCATCAAAAGGTAACTAACATGAGGAGTTAATCAATGAGCAACAAGGTTA--TGTTTTGC-TTTTTTT----- i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20756282 73 - 38779656 TATAG-------------------------------------ACTTTATCCTATTATCAAAGGGTAACTAACAAGAACAGTTAAGCAAAGAGAAAAATTATTA-----------TTATTTT----- i otoGar3.GL873528 C 0 I 1 s mm10.chr16 78131776 72 + 98207768 -------------------------------------------TTTCATCTTACTATAAA-----AATTAACAGTGGGAATTAAGCAAAGAACATTAGGCTTAACTATTTTGC-TTATTTG----- i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3598941 123 - 6883506 tatagcaagcataaacaggaaggggggcagaAATAAATAAATAAAATAAACCTTTCTAAAAAGCTAAAAGGCAAAAATATATAAGCAAAGAGTAACATGATTA--GGTGTTTT-TTTTACTAATTT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204860 110 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e calJac3.chr21 21929321 2056 + 50472720 I e canFam3.chr31 13830659 304 + 39895921 I a score=957.000000 s hg38.chr21_KI270874v1_alt 92119 1 + 166743 -C s panTro5.chr21 3717390 1 + 33445071 -C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343216 1 + 46275980 -C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282571 1 - 13858734 -C i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465631 1 + 32716333 -C i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420433 1 - 185818997 -C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245002 1 - 192294377 -C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726018 1 + 9440265 -C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455380 1 + 21915920 -C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030218 1 - 90373283 -C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209653 1 + 4234846 -C i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213740 1 - 13750039 -C i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931377 1 + 50472720 -C i calJac3.chr21 I 2056 C 0 s mm10.chr16 78131848 1 + 98207768 -T i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3599064 1 - 6883506 G- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204860 110 + 47401472 I e otoGar3.GL873528 20756355 1 - 38779656 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e saiBol1.JH378168 5032693 2067 + 13128814 I e canFam3.chr31 13830659 304 + 39895921 I a score=51986.000000 s hg38.chr21_KI270874v1_alt 92120 7 + 166743 TTTCAGT s panTro5.chr21 3717391 7 + 33445071 TTTCAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343217 7 + 46275980 TTTCAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282572 7 - 13858734 TTTCAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465632 7 + 32716333 TTTTAGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420434 7 - 185818997 TTTCAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245003 7 - 192294377 TTTCAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726019 7 + 9440265 TTTTAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455381 7 + 21915920 TTTCAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030219 7 - 90373283 TTTTAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209654 7 + 4234846 TTTCAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213741 7 - 13750039 TTTTAGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931378 7 + 50472720 TCCCAGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5034760 7 + 13128814 TCCCAGA i saiBol1.JH378168 I 2067 C 0 s otoGar3.GL873528 20756356 7 - 38779656 TTTTAGA i otoGar3.GL873528 I 1 C 0 s mm10.chr16 78131849 7 + 98207768 TCCCAGC i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3599065 6 - 6883506 TTTTAG- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204860 110 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e cebCap1.NW_016107322v1 9607973 2004 - 14377064 I e canFam3.chr31 13830659 304 + 39895921 I a score=59768.000000 s hg38.chr21_KI270874v1_alt 92127 5 + 166743 AACAT s panTro5.chr21 3717398 5 + 33445071 AACAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343224 5 + 46275980 AACAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282579 5 - 13858734 AACAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465639 5 + 32716333 TACAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420441 5 - 185818997 AACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245010 5 - 192294377 AACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726026 5 + 9440265 AACAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455388 5 + 21915920 AACAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030226 5 - 90373283 AACAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209661 5 + 4234846 AACAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213748 5 - 13750039 AACAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931385 5 + 50472720 AACAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5034767 5 + 13128814 AACAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9609977 5 - 14377064 AACAT i cebCap1.NW_016107322v1 I 2004 C 0 s otoGar3.GL873528 20756363 5 - 38779656 AAAAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131856 4 + 98207768 -ACAT i mm10.chr16 C 0 I 1 s dasNov3.JH568778 3599071 5 - 6883506 AATAT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204860 110 + 47401472 I e aotNan1.NW_018487195v1 8745624 2108 + 9889416 I e canFam3.chr31 13830659 304 + 39895921 I a score=57689.000000 s hg38.chr21_KI270874v1_alt 92132 5 + 166743 AACTT s panTro5.chr21 3717403 5 + 33445071 AACTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343229 5 + 46275980 AACTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282584 5 - 13858734 AACTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465644 5 + 32716333 AACTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420446 5 - 185818997 AACTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245015 5 - 192294377 AACTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726031 5 + 9440265 AACTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455393 5 + 21915920 AACTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030231 5 - 90373283 AACTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209666 5 + 4234846 AACTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213753 5 - 13750039 AACTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931390 5 + 50472720 AACTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5034772 5 + 13128814 AACTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9609982 5 - 14377064 AACTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8747732 5 + 9889416 AACTT i aotNan1.NW_018487195v1 I 2108 C 0 s otoGar3.GL873528 20756368 5 - 38779656 AACTC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131861 1 + 98207768 A---- i mm10.chr16 I 1 C 0 s dasNov3.JH568778 3599076 5 - 6883506 AACTA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19204860 110 + 47401472 I e canFam3.chr31 13830659 304 + 39895921 I a score=2317257.000000 s hg38.chr21_KI270874v1_alt 92137 180 + 166743 TAATAGCAGTAAGGAGTTATGGATTAGAGACAGAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGATGATAATAAAGTCAACATTTGAACTTAGCA-ATT-GGTTCTTTGcaatacactgtggagattaacaattcaggcttt-aaacta s panTro5.chr21 3717408 180 + 33445071 TAATAGCAGTAAGGAGTTATGGATTAGAGACAGAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGATGATAATAAAGTCAATATTTGAACTTAGCA-ATT-GGTTCTTTGcaatacactgtggagattaataattcaggcttt-gaacta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343234 180 + 46275980 TAATAGCAGTAAGGAGTTATGGATTAGAGACAGAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGATGATAATAAAGTCAATATTTGAACTTAGCA-ATT-GGTTCTTTGcaatacactgtggagattaataattcaggcttt-gaacta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282589 180 - 13858734 TAATAGCAGTAAGGAGTTATGGATTAGAGACAGAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGATGATAATAAAGTCAACATTTGAACTTAGCA-ATT-GGTTCTTTGcaatacactgtggagattaataattcaggcttt-aaacta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465649 180 + 32716333 TAATAGTAGTAAGGAGTTATGGGTTAGAGACAGAAAAAGAGTAGACATGTGTATATCCATTAGGAAAACTTTGCTTAAGCCGAGAAGGGAATGAAGAGACGATAATAAAGTCAACATTTGAACTTAGCA-ATT-GGTTCTTTGcaatacactgtggagattaataattcaggcttt-aaacta i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420451 180 - 185818997 TAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCCTTAGCCAAGAAGGAAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCA-ATT-GGTTCTTTGCAATACACTGTGGAGATTAATAATGCAGGCTTT-AAACTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245020 180 - 192294377 TAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCCTTAGCCAAGAAGGAAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCA-ATT-GGTTCTTTGCAATACACTGTGGAGATTAATAATGCAGGCTTT-AAACTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726036 180 + 9440265 TAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTATATATGTGTATATCCATTAGGAAAACTTTGCCTTAGCCAAGAAGGAAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCA-ATT-GGTTCTTTGCAATACACTGTGGAGATTAATAATGCAGGCTTT-ACACTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455398 180 + 21915920 TAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCCTTAGTCAAGAAGGGAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCA-ATT-GGTTCTTTGCAATACACTGTGGAGATTAATAATGCAGGCTTT-AAACTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030236 180 - 90373283 TAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTTTAGCCGAGAAGGGAATGAAGAGGATATGATAAAGTCAACATTTGAACTTTGCA-ATT-GGTTCTTTGCAATACACTGTGGAGATTAATAATGCAGGCTTT-AAACTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209671 180 + 4234846 TAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCCTTAGCCAAGAAGGGAATGAAGAGGATACGATAAAGTCAACATTTGAACTTTGCA-ATT-GGTTCTTTGCAATACACTGTGGAGATTAATAATGCAGGCTTT-AAACTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213758 180 - 13750039 TAATAGCAGTAAGGAGTTACGGATTAGAGACACAAAAAGAGTAAATATGTGTATATCCATTAGGAAAACTTTGCTTTAGCCGAGAAGGGAATGAAGAGGATATGATAAAGCCAACATTTGAACTTTGCA-ATT-GGTTCTTTGcaatacactgtggagattaataatgcaggcttt-aaacta i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931395 180 + 50472720 GAATAGCATTAAGGAGTTATGGATTAGAGACAGATAAAGAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTAAAACCCAAAAAAGAATGAAGAGAAGATGAGAAGGTCAACATTTGAACTCCGCA-ATT-GGTTCTTTGcaatacactgtggagattaataatgcgggcttt-aaacca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5034777 178 + 13128814 TAATAGCATTAAGGAGTTACGGATTAGAGACAGAAAAAGAGTAGATATGTGTATATCCATTAGGAAAA--TTGCTAAAACCCAGAAGGGAATGAAGAGAAGATGATAAAGTCAGCATTTGAACTTGGCA-ATT-AGTTCTTTGCAATACACTGTGGAGATTAATAATGCAGGCTTT-AAACTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9609987 180 - 14377064 TAATAGCATTAAGGAGTTACGAATTCGAGACAGAAAAAAAGTAGATATGTGTATATCCATTAGGAAAACTTTGCTAAAACCCAGAAGGGAACGAAGAAAAGATGATAAAGTCAACATTTGAACTTGGCA-ATT-GGTTCTTTGCAATACACTGTGGAGATTGATAATGCGGGCTTT-AAACTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8747737 180 + 9889416 TAATAGCATTAAGGAGTTATGGATTAGAGACAGAAAACGAGTAGATACGTGTATATCCATTAGGAAAACTTTGCTAAAACCCAGAAGGGAATGAAGAGAAGATGATAAAGTCAACATTTGAACTTGGCA-ATT-GGTTCTTTGCAATACACTGTGGAGATTAATAATGTGGGCTTT-AAACTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19204970 181 + 47401472 TAATAGCAATAAGGAGTTATGGATTAGAGATAGAAAAAGAGTAGAAATCTGTACATTCATTAGGAAGACTTTGTTTAAGCCCAGAAGGGAATGAAGAGAGGGTGACAAAGTCAATATTTGAACTTGGCAGATT-GGTTGACTGCAATGCACTGTGGAGGCTAATAATGCAAGCTCT-AAACTA i micMur3.chr31 I 110 I 1171 s otoGar3.GL873528 20756373 180 - 38779656 CAATAGCAATAAACAGTTATGGAATTGAGATAGAAACAGAGTAGAAAGCTGTACATTCATTAGGAAGCCTTTGCTTGAGCCAAGAAAGGAGTGAAGAGAGAGTGAC-AAGTCAGTGCTTCAATCTGGCAGTGT-GACTGATTGCAATACACTGTAAAGGTTAGTAGTGCAGGCTTT-GAACTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78131862 140 + 98207768 -----------------------TTAGGGAC-----------------CTGTAGATCCATTTGGATGACTTTGCTTAAGCCCATAGGGAAACAAAGGCAGAATAATTAGGTCAGAATGTGAACTTGGCA-ATTCTATCGATTGCAAGGTAGCACGGGTGTT-ATGTGCCAGGGTTT-AAACTA i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3599081 175 - 6883506 TGATAGCAATAAGGAA-TATGGATTAGGGACAGAAAAA----AGGAATATGTACTTCCATTAGGAAGACTTTATTTAAGCACAGATGGAAATGAGAGGG--GTCACAGTGTTAACATTCAGACTTGGAA-ATTTGGTTGATTGCATTACACTGTGGAACTTAATGAAGcaggctttgaaacta i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e canFam3.chr31 13830659 304 + 39895921 I a score=1050990.000000 s hg38.chr21_KI270874v1_alt 92317 100 + 166743 gacttctagggtctacagctacttctgctattataaaaccacgaagaaactaactcctctaaacttcagttatgtgtcagttaaatagtacttcctggat s panTro5.chr21 3717588 100 + 33445071 gacttctagtgtctacagctacttctgccattataaaaccatgaagaaactaactcctctaaacttcagttatgtgtcagttaaatagtacttcctggat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343414 100 + 46275980 gacttctagggtctacagctacttctgccattataaaaccatgaagaaactaactcctctaaacttcagttatgtgtcagttaaatagtacttcctggat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282769 100 - 13858734 gacttctagggtctacagctacttctgccattataaaaccacgaagaaactaactcctctaaacttcagtcatgtgtcagttaaatagtacttcctggat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465829 100 + 32716333 gacttctagggtctacagctacttctaccattataaaaccacgaagaaactaactcctctaaacttcggttatgtgtcagttaaatagtacttcctggat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420631 94 - 185818997 GACTTCTAAGGTCTACAACTACT------ATTATAAAACCACAAAGAAACGaactcctctaaacttcagttatgtgtcagttaaatagtactttctggat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245200 94 - 192294377 GACTTCTAAGGTCTATAACTACT------ATTATAAAACCACAAAGAAACGaactcctctaaacttcagttatgtgtcagttaaatagtactttctggat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726216 94 + 9440265 GACTTCTAAGGTCTACAACTACT------ATTATAAAACCACAAAGAAACGaactcctctaaacttcagttatgtgtcagttaaatagtactttctggat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455578 94 + 21915920 GACTTCTAAGGTCTACAACTACT------ATTATAAAACCACAAAGAAACGaactcctctaaacttcagttatgtgtcagttaaatagtactttctggat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030416 93 - 90373283 GACTTCTAAGGTCTACAAC-ACT------ATTATAAAACCACAAAGAAACGAACTCCTCTAAACTTCAGTTATGTGTCAGTTAAATAGTACTTTCTGGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209851 94 + 4234846 GACTTCTAAGGTCTACAACTACT------ATTATAAAACCACAAAGAAACGaactcctctaaacttcagttatgtgtcagttaaatagtactttctggat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 213938 94 - 13750039 gacttctaaggtctacaactact------attataaaaccacaaagaaactaactcctctaaacttcagttatgtgtcagttaaatagtactttctggat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931575 100 + 50472720 aactttcaaagtctgcatctacttctaccattataaaatcacaaagaaactaattcctctgaactgcagttatgtgacagttaagtagtacctcctggat i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5034955 98 + 13128814 GACTTTCAAAGTCTGCATCTACTTCTATCATTATAAAATCACAAAGAAAC--ATTCCTCTCAACTTCAATTATGTACCAGTTAaatagtatctcctggat i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610167 100 - 14377064 GACTTTCAAAGTCTGCATCTACTTCTACCATTATAAAATCACAAAGAAACTAATTCCTCTCAACTTCAATTATGTTTCAGTTAaatagtacctcctggat i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8747917 100 + 9889416 GACTTTCAAAGTCTGCATCTACTTCAACCATTATAAAATCACAAAGAAACtaattcctctaaacttcagttatgtgtcagttaaatagtacctcctggat i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20756553 99 - 38779656 CACTTCCAGAGTCGGTATCTACTTCCACCCTTAGAAAACCACAGGGAAAGTAACTCCTCAAAGCCTCAATTGCCTGTCAGTTAAATAA-ACCTCCTAGAT i otoGar3.GL873528 C 0 I 887 s mm10.chr16 78132002 97 + 98207768 CACTTCCTGGATCTGTACAAAAATGAATAGTTATAAAACATTGGGATAACTAATT--TCTAAGTGTCAATTGC-TGACAGTCGAATAGCACCTCCCACAT i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3599256 97 - 6883506 gatttccaggattt-catttagctccaccattgtaagatcc--aggaaattaactcctctaagcctcaattgcctgtcagttaaatggtacctcccaaat i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19205151 1171 + 47401472 I e canFam3.chr31 13830659 304 + 39895921 I a score=3404007.000000 s hg38.chr21_KI270874v1_alt 92417 329 + 166743 aagattatgcttgacataatgcatgtaaaagtactcagcgccatttgtggtacacagtaagaattc----actg-ttaagtatcattACTAGCTATGGTGA------GGAGATAAAAGTAGAGAAAGAGAAATCCAGAATGATTCTCCG-ATTTCCTGCTTGAATAATGAAGTAC-TAGGTAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGTAGGtctc------------tctctctctctttctctTT-------------------------------------TAGAATTATTATCTGCCTCTTTTTTC-AATCCTAGTAT-TCTCCTTAAC-CTAGACCAGGAAGCTGAACCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAAT s panTro5.chr21 3717688 330 + 33445071 aagattatgcttgacataatgcatgtaaaagtactcagtgccatttctggtacacagtaagaattc----actg-ttaagtatcattACTAGCTATGGTGA------GGAGATAAAAGTagggaaagagaaatcaagaatgattctcag-atttcctgcttgaataatgaagTAC-TAGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGTAGGtctc------------tctctctctctttctctTT-------------------------------------TAGAATTATTATCTGCCTCTTTTTTC-AATCCTAGTAT-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343514 330 + 46275980 aagattatgcttgacataatgcatgtaaaagtactcagtgccatttctggtacacagtaagaattc----actg-ttaagtatcattACTAGCTATGGTGA------GGAGATAAAAGTagggaaagagaaatcaagaatgattctcag-atttcctgcttgaataatgaagTAC-TAGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGTAGGtctc------------tctctctctctttctctTT-------------------------------------TAGAATTATTATCTGCCTCTTTTTTC-AATCCTAGTAT-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3282869 326 - 13858734 aagattatgcttgacataatgcatgtaaaagtactcagcgccatttctggtacacagtaagaattc----actg-ttaagtatcattACTAGCTATGGTGA------GGAGATAAAAGTagggaaagagaaatcaagaatgattctcag-atttcctgcttgaataatgaagTAC-TAGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGTAGG----------------TCTCTCTCTCTTTCTCTTT-------------------------------------TAGAATTATTATCTGCCTCTTTTTTC-AATCCTAGTAT-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4465929 322 + 32716333 aagattatacttgacacaatgcatgtaaaagtactcagcgccatttctggtacacagtaagaattc----actg-ttaagtatcattACTAGCTATGGTGA------GGAGATAAAAGTAGGGAAAGAGAAATCAAGAATGATTCTCAG-ATTTCCTGCTCGAATAATGAAGTAC-TAGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGTAGG--------------------TCTCTCTCTCTCTTT-------------------------------------TAGAATTATTATCTGCCTCTTTTTTC-AATCCTAGTAT-TCTCCTTAACACTAGACCAGGAAGCTGAATCTGCTGGATATCTTCCA-TTTTCCCTTCAGATCAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155420725 336 - 185818997 aagattgtacttgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactc----actg-ttaagtatcattACTGGCTATGGTGA------GGAGATGAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAG-ATTTCCTGATTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGtctcctctt-----tctctctctctctctctctct-------------------------------------cAGAATTATTATCTGCCTC-TTTTTC-AATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCAA-TTTTCCCTTCAGATCAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245294 336 - 192294377 aagattgtacttgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactc----actg-ttaagtatcattACTGGCTATGGTGA------GGAGATGAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAG-ATTTCCTGATTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGtctcctctt-----tctctctctctctctctctct-------------------------------------cAGAATTATTATCTGCCTC-TTTTTC-AATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCAA-TTTTCCCTTCAGATCAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726310 334 + 9440265 aagattgtacttgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactc----actg-ttaagtatcattACTGGCTATGGTGA------GGAGATGAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAG-ATTTCCTGATTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGtctcctctt-------tctctctctctctctctct-------------------------------------cAGAATTATTATCTGCCTC-TTTTTC-AATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCAA-TTTTCCCTTCAGATCAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8455672 329 + 21915920 aagattgtacttgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactc----actg-ttaagtatcattACTGGCTATGGTGA------GGAGATCAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAG-ATTTCCTGACTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGtctc------------tctctctctctctctctct-------------------------------------cAGAATTATTATCTGCCTC-TTTTTC-AATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCAA-TTTTCCCTTCAGATCAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030509 357 - 90373283 AAGACTGTACTtgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactc----actg-ttaagtatcattACTGGCTATGGTGA------GGAGATCAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAG-ATTTCCTGATTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGTGtc------------tctctctctctctctctctctctcacacac-acacacacacacacaca--------caGAATTATTATCTGCCTC-TTTTTC-AATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCGGGATATCTTCAA-TTTTCCCTTCAGATCAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2209945 327 + 4234846 aagattgtacttgacataatgcaagtaaaagtactcagcaccatttctgacacacagtaagaactc----actg-ttaagtatcattACTGGCTATGGTGA------GGAGATCAAAGTAGGCAAAGAGAAATCAAGAATGATTCTCAG-ATTTCCTGATTGAATAATGAAGTAC-TGGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCAGGtctc------------tctctctctctctctct---------------------------------------cAGAATTATTATCTGCCTC-TTTTTC-AATCCTAGTAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGATGGATATCTTCAA-TTTTCCCTTCAGATCAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214032 339 - 13750039 aagattgtacttgacataatgcaagtaaaagtactcagcacca-ttctgacacacagtaagatctc----aCTG-TTAAGTATCA-TACTGGCTATGGTGA------GGAGATTAAAGTAGGGAAAGAGAAATC-AGAATGATTCTCAG-ATTTCCTGCTTGAATAATGAAGTAC-TAGATAATGTTGGAAGAAAAATAGGTTTTGCAAAAAGGCATGtctctctttctttctctctctctctctctctctct-------------------------------------cAGAATTATTATCTGCCTCTTTTTTC-AATCCTAGGAC-TCTCCTTAACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCAA-TTTTCCCTTCAGATCAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931675 314 + 50472720 aagattacacctgatgtaatgcatgtaaaagtactcagcaccaatcctggcacacagtgagaattc----aCTG-TTCAATATCATAACTGGCTATGGTGA------GGAGATGAAAGTAGGGAAA---AAATCAAGAATGATTCTTAG-ATTTTCTACTTAAATTATGAAGTAC-TAGATAATGTTGGAAGGAAAACAAGTTTTGCAAAAAG--------------------------CTCTCTCTCTCTCT-------------------------------------CAGAATTATTATTTGTCTCTTTTTTC-AATCCTAGTAT-TGTCCTTCACACTAGACCAGGAAGCAGAACCAGCTGGATATCTTCCACTTTTCCCTTCAGATCAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035053 369 + 13128814 aagattacacggtatgtaatgcatgtaaaagtactcagcaccatttctggcacacagtgagaattc----actg-ttaagtatcattACTGGCCATGGTGA------GGAGATGAAAGTAGGGAAA--GAAATCAAGAATGATTC--AG-ATTTTCTACTTGAATAATGAAGTAT-TGGATAATGTTGGAAGGAAAACAAATTTTGCAAAAAGGtctgtctctctctc------tctctctctctctctctctcacacacacac-acacacacacacacacacacacacacaGAATTATTATTTGTCTCTTTTTTC-AATCCTAGTAT-TGCCCTTCACACTAGACCAGGAAGCTGAACCTACTGGATATCTTTCACTTTTCCCTTCAGATCAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610267 330 - 14377064 aagattacacgtgatgtaatgcatgtaaaagtactcagcaccatttctggcacacagtgagaattc----actg-ttaagtatcattACTGGCTATGGTGA------GGAGATGAAAGCAGGGAAA--AAAATAAAGAATGATTCTCAG-ATTTTCTACTTGAATAATGAAGTAC-TAGATAATGTTGGAAGGAAAACAAGTTTTGCAAAAAG----GCctctctctc------tttctctctccctctctct-------------------------------------cAGAATTATTATTTGTCTCTTTTTTC--ATCCTAATAT-TGTCCTTCACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTTCACTTTTCCCTTCAGATCAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748017 358 + 9889416 aagattacatttaatgtaatgcatgtaaaagtactcagcaccaattctggcacacagtgagaatta----actg-ttaagtatcattACTGGCTATGGTGA------GGAGATGAAAGTAGGGAAA--AAAATCAAGAATCATTCTTAG-ATTTTCTACTTGAATAATGAAGTAC-TAGATAATGTTGGAAGGAAAACAAGTTTTGCAAAAAG----Gtctctctctc------tctctctctctctctctctctctctctctctGTGTGTGTGTGTCT-----------CAGAATTATAATTTGTCTCTTTTTTTCAATCCTAGTAT-TGTCCTTCACACTAGACCAGGAAGCTGAACCTGCTGGATATCTTCCATTTTTCCCTTCAGATCAAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20757539 306 - 38779656 aagattatatttgacataacacat------gtactgagtgctgtctctggcacacagtaagaatttgctaactg-ctaAGTATTTTTGCTGCTTACAGTGA------TGAGAAAAAAG----GAAGGAGAAATCGAGGGTGATTCTTAG-GTTTCTTGTCTATATAATAAAGTACTTAGATAATGTTGAAAGAAAAAAATGTATTTTGAAAATGT--GTTTT------------ATTTTTTTCCTCTCTCTCT-------------------------------------CAGAATTATCATCAGCCTC-TTTTCC--------------CTGCTT-----TAGGCCAGAAAGCTGAGTCtgctgggtacctgccacttggcccctgagatccat i otoGar3.GL873528 I 887 C 0 s mm10.chr16 78132099 308 + 98207768 ---ATATTACCTGACAC-ATGCATGTGAACGTACCCAATACCTCTTTTGCCATACCCAAAAAATTG----ACTA-TTAAGTAT---TATTCAGTCTGGTGA------AGAAATCA------GGAGGCAGGAAATAAGGAAAATTC---A-TTTTCCTGTCCAAAT-ATGAAGTACACAGACAATGATAGAAGATAAAGATGATTTGAAAAATATAGGGT---------------TATTTTTTTCCTTTTCTCA-------------------------------------CAAAATTATCATCTGCCTCTTATTCT-GGTCCTAGTTTGTATCCTG-----CAAAGCAGGAAACTGAGGCTGCTAGAACTCTTCTCCTTGATCCTTCACATCCAT i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3599353 287 - 6883506 aagattgcaattgccataatgcatgtaac-gaactaggcaccatttatgacatacagt-aGAATTC----ATGGCTTAAATATTATTATTGGCTATACTGAAAGAAGGGAGGTGAAAGAAGGGGAA---AAATCAAGAATAA--CTAAGCGTTTCCTACTTAAGTAATGAAGGAC-C--ATTATG-------------AGGGGTGGTGAAAATGTAGTTGTT------------TC-----------CTCTCT-------------------------------------CAGGATTGTTATCTGCTCC--------AACTCCAGAAC-------------TAGACCAGGAAGCTGAGTCTCctgagtagcttccacttgcacctttaaatccat i dasNov3.JH568778 C 0 I 193 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19205151 1171 + 47401472 I e canFam3.chr31 13830659 304 + 39895921 I a score=27846.000000 s hg38.chr21_KI270874v1_alt 92746 2 + 166743 TT s panTro5.chr21 3718018 2 + 33445071 TT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343844 2 + 46275980 TT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283195 2 - 13858734 TT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466251 2 + 32716333 TT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421061 2 - 185818997 TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245630 2 - 192294377 TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726644 2 + 9440265 TT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456001 2 + 21915920 TT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030866 2 - 90373283 TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210272 2 + 4234846 TT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214371 2 - 13750039 TT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931989 2 + 50472720 TT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035422 2 + 13128814 TT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610597 2 - 14377064 TT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748375 2 + 9889416 TT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20757845 2 - 38779656 tt i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78132407 2 + 98207768 TT i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599640 193 - 6883506 I e micMur3.chr31 19205151 1171 + 47401472 I e canFam3.chr31 13830659 304 + 39895921 I a score=15561.000000 s hg38.chr21_KI270874v1_alt 92748 1 + 166743 T s panTro5.chr21 3718020 1 + 33445071 T i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343846 1 + 46275980 T i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283197 1 - 13858734 T i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466253 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421063 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245632 1 - 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726646 1 + 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456003 1 + 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030868 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210274 1 + 4234846 T i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214373 1 - 13750039 T i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931991 1 + 50472720 T i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035424 1 + 13128814 T i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610599 1 - 14377064 T i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748377 1 + 9889416 T i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20757847 1 - 38779656 t i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78132409 1 + 98207768 T i mm10.chr16 C 0 C 0 s canFam3.chr31 13830963 1 + 39895921 t i canFam3.chr31 I 304 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599640 193 - 6883506 I e micMur3.chr31 19205151 1171 + 47401472 I a score=149687.000000 s hg38.chr21_KI270874v1_alt 92749 15 + 166743 C-------------------TGCATCTATGA--AGT s panTro5.chr21 3718021 15 + 33445071 C-------------------TGCATCTACGA--AGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343847 15 + 46275980 C-------------------TGCATCTACGA--AGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283198 15 - 13858734 C-------------------TGCATCTACAA--AGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466254 15 + 32716333 C-------------------TGCATCTACCA--AGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421064 15 - 185818997 C-------------------TGCATCTACCA--AGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245633 15 - 192294377 C-------------------TGCATCTACCA--AGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726647 15 + 9440265 C-------------------TGCATCTACCA--AGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456004 15 + 21915920 C-------------------TGCATCTACCA--AGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030869 15 - 90373283 C-------------------TGCATCCACCC--AGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210275 15 + 4234846 C-------------------TGCATCTACCA--AGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214374 15 - 13750039 C-------------------TGCATCCACCA--AGC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21931992 15 + 50472720 C-------------------TACATCAACCA--AGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035425 15 + 13128814 C-------------------TTCATCAATCA--AGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610600 15 - 14377064 C-------------------TGCATCAACCA--AGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748378 15 + 9889416 C-------------------TGCATCAACCA--AGT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20757848 17 - 38779656 c-------------------tacctgctccatgagc i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78132410 34 + 98207768 CCATCTGCTCCCTGATTATATATGTCCATGC--AGT i mm10.chr16 C 0 I 150 s canFam3.chr31 13830964 15 + 39895921 c-------------------tgcatccACCA--AGC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3599833 15 - 6883506 C-------------------TGTATCCAGCA--AGC i dasNov3.JH568778 I 193 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19205151 1171 + 47401472 I a score=41128.000000 s hg38.chr21_KI270874v1_alt 92764 12 + 166743 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC s panTro5.chr21 3718036 12 + 33445071 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343862 12 + 46275980 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283213 12 - 13858734 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466269 12 + 32716333 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421079 12 - 185818997 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245648 12 - 192294377 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726662 12 + 9440265 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456019 12 + 21915920 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030884 12 - 90373283 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210290 12 + 4234846 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214389 12 - 13750039 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932007 12 + 50472720 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035440 12 + 13128814 GAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610615 12 - 14377064 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748393 12 + 9889416 AAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAAC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20757865 163 - 38779656 aaggagactggatcgcattgatgaatgggacactgtcttttctctggtttcatattagatatggcacatgagaagcacctagaaaagataagagaggtgagaggaatcaaggtatttactccgactctctctgtgggattgccataggctggaggcatccacc i otoGar3.GL873528 C 0 I 10 s mm10.chr16 78132594 12 + 98207768 AAGAT-------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAAC i mm10.chr16 I 150 C 0 s canFam3.chr31 13830979 1 + 39895921 ----------------------------------------------------------------------------------------------------------------------------------------------------------------A-- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3599848 12 - 6883506 AATGT-------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAAC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19205151 1171 + 47401472 I a score=894755.000000 s hg38.chr21_KI270874v1_alt 92776 65 + 166743 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--TG---CCTGTGGCTTCTTAGTGCCTT s panTro5.chr21 3718048 65 + 33445071 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--TG---CCTGTGGCTTCTTAGTGcctt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343874 65 + 46275980 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--TG---CCTGTGGCTTCTTAGTGcctt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283225 65 - 13858734 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--TG---CCTGTGGCTTCTTAGTGcctt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466281 65 + 32716333 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTAGAC--TG---CCTGTGGCTTCTTAGTGTctt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421091 65 - 185818997 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--GG---CCTGTGACTTCTTAGcgcctt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245660 65 - 192294377 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--GG---CCTGTGACTTCTTAGCGCCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726674 65 + 9440265 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--GG---CCTGTGACTTCTTAGcgcctt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456031 65 + 21915920 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--GG---CCTGTGACTTCTTAGTGcctt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030896 65 - 90373283 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--TG---CCTGTGACTTCTTAGcgcctt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210302 65 + 4234846 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--GG---CCTGTGACTTCTTAGTGcctt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214401 65 - 13750039 TTCTGCCAAGAAATCCTGCTGCTTCTAGCCTGAGTCTTACAC--TG---CCTGTGACTTCTTAGcgcctt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932019 65 + 50472720 TTCTGCCAAAAAGTcctgctgcttttagcctgagtcctacac--tg---cctgtggtttcttcacacctt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035452 65 + 13128814 TTCTGCCAAGAAGTcctgctgcttttagcctgagtcctacac--tg---cccgtggtttcttcacacctt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610627 65 - 14377064 TTCTGCCAAGAAGTCCTGCTGCTTTTAGCCTGAGTCCTACAC--TG---CCTGTGGTTTCTTcacacctt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748405 65 + 9889416 TTCTGCCAAGAAGTcctgctgcttttagcctgagtcctacac--tg---cctgtggtttcttcacacctt i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19206322 67 + 47401472 TTCTACCAAGCAGTCCTACTGCTTCTAGCCTGAGTCCTACGCTGCC---CTTGTGGTTTCATCACCCCTT i micMur3.chr31 I 1171 C 0 s otoGar3.GL873528 20758038 65 - 38779656 ttctgcccagcagccctgcggttgctagcctgagtcctatgc--cc---cttgtggtttcctcgcacctc i otoGar3.GL873528 I 10 C 0 s mm10.chr16 78132606 60 + 98207768 TTCTGCCTAACAGCCCTACTGATTCTAGCTTAAGTCTTAAAT--TA---AATTTTATTT-----TGCCCA i mm10.chr16 C 0 C 0 s canFam3.chr31 13830980 65 + 39895921 ---TCCCTAACCATcctgcagtttctagcctgagtcctgcat--tgtcccctgtggtatcctcacacctt i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3599860 67 - 6883506 TTCTGCACAGAGGTCCCACTGATTCT-GTGTGAGTCCTAAAC--TCTATCTTGTGATTTCTCTACACCTT i dasNov3.JH568778 C 0 M 560 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I a score=1254245.000000 s hg38.chr21_KI270874v1_alt 92841 99 + 166743 AAAaaacaatccctccattaaactctactgaaa--ttgtccaattggattgtgccatctctggttctgcaaagacccttactgatacaTGGAAACTGGCAT s panTro5.chr21 3718113 99 + 33445071 aataaacaatccctccattaaactctactgaaa--ttgtccaattggattgtgccatctctggttctgcaaagacccttactgatacaTGGAAACTGGCAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17343939 99 + 46275980 aataaacaatccctccattaaactctactgaaa--ttgtccaattggattgtgccatctctggttctgcaaagacccttactgatacaTGGAAACTGGCAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283290 99 - 13858734 aataaacaatccctccattaaactctactgaaa--ttgtccaattggattgtgccaactctggttctgcaaaggcccttactgatacaTGGAAACTGGCAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466346 99 + 32716333 aataaacaatccctccgttaaactctactgaaa--ttgtccagttggattgtgccatctctggttctgcaaagacccttattgatacaTGGAAACTGGCAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421156 99 - 185818997 aataaacattccctccatcaaactctgctgaaa--ttgtccagttggattgtaccatctctggttctgcaaagacccttattgatccaTGGAAACTGTCAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245725 99 - 192294377 AATAAACATTCCCTCCATCAAACTCTGCTGAAA--TTGTCCAGTTGGATTGTACCATCTCTGGTTCTGCAAAGACCCTTATTGATCCATGGAAACTGTCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726739 99 + 9440265 aataaacattccctccatcaaactctgctgaaa--ttgtccagttggattgtaccatctctggttctgcaaagacccttattgatccaTGGAAATTGTCAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456096 99 + 21915920 aataaacattccctccattaaactctgctgaaa--ttgtccagttggattgtacgatctctggttctgcaaagacccttattgatccaTGGAAACTGGCAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15030961 99 - 90373283 aataaacactccctccattaaactctaccgaaa--ttgtccaattggattgtaccatctctggttctgcaaagacccttattgatccaTGGAAACTGGCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210367 99 + 4234846 aataaacattccctccattaaactctgctgaaa--ttgtccagttggattgtaccatctctggttctgcaaagacccttattgatccaTGGAAACTGGCAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214466 99 - 13750039 aataaacattccctccattaaactctactgaaa--ttgtccagttggattttaccatctctggttctgcaaagacccttattgatccaTGGAAACTGGCAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932084 99 + 50472720 agtaaacattccctttgttaaactctactgaaa--ctgttcagttgtattgtgccatctctggttctgcaaagccccttattgataAACGGAAACTGGCAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035517 99 + 13128814 agtaaacattccctttgttaaactctactgaaa--ctgttcagttgtattgtgccatctctgattcagcaaagccccttattgataAATGGAAATTGGCAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610692 99 - 14377064 agtaaacattccctttgttaaactctgctgaaa--ctgttcagttgtattgtgccatctctgattctgcaaagccccttattgataAATGGAAACTGGCAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748470 99 + 9889416 agtaaacattccctttgttaaactctactgaaa--ctgttcagttgtattgtgccatctctggttctgcaaagccccttattgataAACGGAAACTGGCAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19206389 99 + 47401472 AGAAAATACTCTGTCCATCAAACTCTCTTGAAA--TTATCCAACTAAAATGTGCCATCTCTGGTTCTGCCAAAACCCTTTCTGACACATGGTAACTGACAT i micMur3.chr31 C 0 I 637 s otoGar3.GL873528 20758103 98 - 38779656 agtaaatgtttcctccatcaaactctcctgaaa--gtatccaattataatgtaccaactccggttctgcc-aaacccttgctgacacaTAGAAACTGACAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78132666 101 + 98207768 CCTTAAAATTTTCTCTAGTCAACTCTCTTGAAAAGTTTTCCAAATGGAGTATATCTTTTATGGTTCTGCTAATATCCTTACTGACCCACAAAGGATAAAAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13831045 95 + 39895921 agtaaaaagtccctctaccaaactcttctgaaa--ttgtccgatttccgtatgccatctctggatcttccaagaccc----taacACACTGAGACTGAAGT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M a score=1360642.000000 s hg38.chr21_KI270874v1_alt 92940 140 + 166743 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--AAGTATATCTCAATACA----------------------------------TCAGAACTGATTATTTCCTACTCTATGGTGACCTACTCTAAGGAGATTCGAGGCAATT-------T---TAAAAATCCAATAAAAGGGGGGTTAG--- s panTro5.chr21 3718212 140 + 33445071 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAT--AAGTATATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTACTCTATGGTGACCTACTCTAAGGAGATTCGAGGCAATT-------T---AAAAAATCCAATGAAAGGGGGGTTAG--- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344038 140 + 46275980 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAT--AAGTATATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTACTCTATGGTGACCTACTCTAAGGAGATTCGAGGCAATT-------T---AAAAAATCCAATGAAAGGGGGGTTAG--- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283389 140 - 13858734 ATCCTGGAATCAAGTCTCCGGGAGGGATTGGGAGT-GAC--AAGTGTATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTACTCTATGGTGACCTACTCTAAGGAGATTCGAGGCAATT-------T---AAAAAATCCAATAAAAGGGGGGTTAG--- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466445 140 + 32716333 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--AAGTATATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTACTCTATAGTGACCTACTCTAAGGAGATTCAAGGCAATT-------T---AAAAAATCCAATAAAAGGGGGGTTAG--- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421255 143 - 185818997 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--CAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGCTCTACTTTAAGGAGACTCAAGGCAATT-------TAAAAAAAAATCCAATAAAGGGGGTGTTAG--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245824 142 - 192294377 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--CAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGCTCTACTTTAAGGAGACTCAAGGCAATT-------T-AAAAAAAATCCAATAAAGGGGGTGTTAG--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726838 142 + 9440265 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--CAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGCTCTACTTTAAGGAGACTCAAGGCAATT-------T-AAAAAAAATCCAATAAAGGGGGTGTTAG--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456195 143 + 21915920 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--CAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGCTCTACTTTAAGGAGACTCAAGGCAATT-------TTTAAAAAAATCCAATAAAGGGGGTGTTAG--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031060 149 - 90373283 ATCCTGAAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--AAACACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTGATCTATAGGGATCTACTTAAAGGAGACTCAACGCAATTAAAAAAAA-AAAAAAAATCCAATAAAGGGGGCGTTAG--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210466 142 + 4234846 ATCCTGGAATCAAGTCTCCTGGAGGGATTGAGAGT-GAC--CAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGCTCTACTTTAAGGAGACTCAAGGCAATT-------T-TAAAAAAATCCAATAAAGGGGGTGTTAG--- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214565 143 - 13750039 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GAC--AAATACATCTCAATACA----------------------------------TCAGAACTGATTATTCCCTTCTCTATAGGGATCTACTTTAAGGAGACTCAAGGCAATT-------TTTTAAAAAATCCAATAAAGGGGGCATTAG--- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932183 139 + 50472720 ATCCTGGAATCAAGTCTCCTGGAGGGATTGGGAGT-GGT--GAACATATCTCAATACA----------------------------------TCCGAACTGATTATTCCCTACTCCATAGGGACTTACTCTAAGGAGACTCAAGGCAATT-------A---AGTAAATCCAATAAAAAGGGGG-TAG--- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035616 139 + 13128814 ATCCTGGAATCAACTCTCCTGGAGGGATTGGGAGT-GAT--GAACATATCTCAATACA----------------------------------TCCGAACTGATTATTCCCTACTCTATAGGGACCTACTCTAAGGAGACTCAAGGCAATT-------A---AATAAATCCAATAAAAAGAGGG-TAG--- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610791 139 - 14377064 ATCCTGGAATCAATTCTCCTGGAGGGATTGGGAGT-GAT--GAACATATCTCAATACA----------------------------------TCCAAACTGATTATTCCCTACTCTGTAGGGACCTACTCTATGGAGACTCAAGGCAATT-------A---AATAAATCCAATAAAAAGGGGG-TAG--- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748569 134 + 9889416 ATCCTGGAATCAAGTCTC-----GGGATTGGGAGT-GAT--GAACATACCTCAATACA----------------------------------TCCGAACTGATTATTCCCTACTGTATAGGGACCTACTCTAAGGAGACTCAAGGCAATT-------A---AATAAATCCAATAAAAAGGGGG-TAG--- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20758201 133 - 38779656 ATCCCGGAATCAAGACTCCTGTAGGGATTGGCAGT-GACAGAGACGTACCTCAATACT----------------------------------TTGACACTGATTCTTCCCT---------GGGTCTACCCTGGGGAGACTTCAGCTAATT-------A---AAGAAACTCAAGAAAGACAGGCGTGG--- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78132767 128 + 98207768 AATCTAGATTTGAACATTCCAAAGGATTCAGAATTAGAG--AAACATACCTTGATAAA----------------------------------CTAAACAGAATTCTTTCCT--------GGGCCCCAT----GGGAAACTTTCAACCAGT-------T----AAAAATACTGGAGAGAGATAGTTAG--- i mm10.chr16 C 0 C 0 s canFam3.chr31 13831140 166 + 39895921 GTCCCGGATCCAAGACCTTTAGGGAGAGCAGGCGT-GATGGAAACATACTTGGATACACTGCAGGGGCAATGAAAGGATAGATTTAAAAATCTTGAATCTGATTCTTTCCT---------GGGCCTGGTCTGGGGAATC----ATCAGCC-------A---AAGAAACTCAATAAAGAGAGTAGGGGTGg i canFam3.chr31 C 0 I 398 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I a score=502713.000000 s hg38.chr21_KI270874v1_alt 93080 44 + 166743 AATATCAATCATAGC-ATGGAGGTTAtaaagtagcaattactgag s panTro5.chr21 3718352 44 + 33445071 AATATCAATCATAGC-ATGGAGGTTAtaaagtagcaattactgag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344178 44 + 46275980 AATATCAATCATAGC-ATGGAGGTTAtaaagtagcaattactgag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283529 44 - 13858734 AATATCAATCATAGC-ATGGAGGTTAtaaagtagcaattactgag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466585 44 + 32716333 AAcatcaatcatagc-atggaggctataaagtagcaattactgag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421398 44 - 185818997 AAcatcaatcatagc-atagaggctataaagtagccattactgag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162245966 44 - 192294377 AAcatcaatcatagc-atggaggctataaagtagccattactgag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8726980 44 + 9440265 AAcatcaatcatagc-atggaggctataaagtagccattactgag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456338 44 + 21915920 AAcatcaatcatagc-atggaggctataaagtagccattactgag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031209 44 - 90373283 AATATCAATCATAGC-ATGGAGgctataaagtagccattactgag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210608 44 + 4234846 AAcatcaatcatagc-atggaggctataaagtagccattactgag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214708 44 - 13750039 AAcatcaatcatagc-atggaggctataaagtagcaattactgag i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932322 44 + 50472720 AACATCAATCACAGG-ACGGATgctataaagtagtaattactgag i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035755 44 + 13128814 AACATCAATCACAGC-ATGGATgctataaagtagtaattactgag i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610930 41 - 14377064 AACATCAATCACAGC-ATGGATGCTATAA---agtaattactgag i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748703 44 + 9889416 AACATCAATTACAGC-ATGGATgctataaagtagtaattactgag i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20758334 44 - 38779656 AACATCAATCAGGGC-AAAGGTGCTATGAAGTAGCAATTACGGGG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78132895 45 + 98207768 GATAGTGTTCATGCCTATGAGTACTGCAAAGTAGTAATTAATGAG i mm10.chr16 C 0 I 39 s canFam3.chr31 13831704 43 + 39895921 AATATGCAGCACGGT-ATGAATGTTGAAAAA-AAAAATTAGTGGG i canFam3.chr31 I 398 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I a score=656277.000000 s hg38.chr21_KI270874v1_alt 93124 59 + 166743 gaagcttaccagacag-gaggtcctgagggcagccATGCGAGAGGAGTATAATTCTGCTG s panTro5.chr21 3718396 59 + 33445071 gaagcttaccagacag-gaggtcctgagggcagccATGCGAGAGGAGTATAATTCTGCTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344222 59 + 46275980 gaagcttaccagacag-gaggtcctgagggcagccATGCGAGAGGAGTATAATTCTGCTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283573 59 - 13858734 gaagcttaccagacag-gaggtcctgagggcagccATGCGAGAGGAGTATAACTCTGCTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466629 59 + 32716333 ggagcttaccagacag-gagggcctgaaggcagccacgcaaaTGGAGTATAACTCTGCTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421442 59 - 185818997 ggagtttaccggacag-gagggcctgagggcagccATGTGAGTTGAGTATAACTCTGCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246010 59 - 192294377 ggagtttaccggacag-gagggcctgagggcagccATGTGAGTTGAGTATAACTCTGCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727024 59 + 9440265 ggagtttaccggacag-gagggcctgagggcagccATGTGAGTTGAGTATAACTCTGCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456382 59 + 21915920 ggagtttaccagacag-gagggcctgagggcagccATGTGAGTTGAGTATAACTCTGCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031253 59 - 90373283 ggagtttaccggacag-gagggcctgagggcagccATGTGAATTGAGTATAACTCTGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210652 59 + 4234846 ggagtttaccagacag-gagggcctgagggcagccATGTGAGTTGAGTATAACTCTGCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214752 59 - 13750039 ggagtttagtggacag-gtgggcctgagggcagccATGTGAGTTGAGTATAACTCTGCTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932366 59 + 50472720 ggagtttcccagacag-gagggcctgagggcagccatacgagtTGAGTATAACTCTGCTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035799 59 + 13128814 ggagtttcccagacag-gagggcctgagggcagccatacgagtTGAGTATAACTCTGCTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9610971 59 - 14377064 ggagtttcccagacag-gagggcctgagggcagccatacaAGTTGAGTATAACTCTGCTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748747 59 + 9889416 ggagtttcccagacag-gagggcctgagggcagccatacgagtTGAGTATAACTCTGCTG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20758378 60 - 38779656 GGAAGTGCTTAGACGGAGGGGGCCTGAAGGCAGCCAAACAAGTTAAGTATAGCTCAGCCA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13831747 59 + 39895921 GGAGATGCCTAAGCAG-GAAAGCCTGAGGGTCGTCATACAAGGTGAGTTTGCCTCTGCAT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I e mm10.chr16 78132940 39 + 98207768 I a score=832150.000000 s hg38.chr21_KI270874v1_alt 93183 77 + 166743 GGCAGGTGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTCTGCAGGTCCAG-TCACATAATTAAAG--GCACTGGT-G s panTro5.chr21 3718455 77 + 33445071 GGCAGGTGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTCTGCAGGTCCAG-TCACATCATTAAAG--GCATTGGT-G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344281 77 + 46275980 GGCAGGTGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTCTGCAGGTCCAG-TCACATCATTAAAG--GCATTGGT-G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283632 77 - 13858734 GGCAGGTGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTCTGCAGGTCCAG-TCACATAATTAAAG--GCATTGGT-G i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466688 77 + 32716333 GGCAAGTGTAGGAAGGATGGACTGTAGAAAAGACCAGGAATTTTGCAGGTCCAG-TCACATAATTAAAG--GCATTGGT-G i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421501 77 - 185818997 GGCAGGTGTAGAAAGGATGGGCTGTAG-AAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAAAG--GCATTGGTAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246069 77 - 192294377 GGCAGGTGTAGAAAGGATGGGCTGTAG-AAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAAAG--GCATTGGTAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727083 77 + 9440265 GGCAGGTGTAGAAAGGATGGGCTGTAG-AAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAAAG--GCATTGGTAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456441 76 + 21915920 GGCAGGTGTAGAAAGGATGGGCTGTAG-AAAGACCAGCAATTTTTCAGGTCCAA-TCACATAATTAAAG--GCATTGGT-G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031312 77 - 90373283 GGCAGGTATAGAAAGGATGGGCTGTAGAAAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAACG--GCATTGGT-G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210711 76 + 4234846 GGCAGGTGTAGAAAGGATGGGCTGTAG-AAAGACCAGCAATTTTGCAGGTCCAA-TCACATAATTAAAG--GCATTGGT-G i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214811 77 - 13750039 GGCAGGTGTAGAAAGGATGAGCTGTAGAAAAGACCAGGAATTTTGCAGGTCCAG-TCACATAATTAAAG--GCATTGGT-G i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932425 74 + 50472720 GGCATGT---GAAAGAATGGGCTATAGAAAAGGCCAGGAATTTTGCAGGTCCAA-CCACATAATTAAAG--GCATTGGT-G i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035858 77 + 13128814 GGCAGGTGTAGAAAGGAGGGGCTATAGAAAAGATCAGGAATTTCGCAGGTCCAA-CCACATAATTAAAG--GGATTGGT-G i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611030 77 - 14377064 GGCAGGTGTAGAAAGGATAGGCTATAGAAAAGGCCAGGAATTTTGCAGGTCCAA-CCACATAATTAAAG--GCATTGGT-G i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748806 77 + 9889416 GGCAGGTGAAGAAAGGATGGGCTATAGAAAAGTCCAGGAATTTTGCAGGTCCAA-CCACATAATTAAAG--GCATTGGT-G i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20758438 76 - 38779656 GACAGGTGCAGAAAGGATGGGTTATAG-AGAGGACAAGAAGTTTGCAAATCCAC-CCCCATAAGTAGAG--GCAGTGGT-G i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78132979 71 + 98207768 GACTGGCACAGAAAGAATAGGCTATTGAAGGGTCCAGCTAGTACACAAGGATAACCCACATAATTAGAG------TG---- i mm10.chr16 I 39 C 0 s canFam3.chr31 13831806 71 + 39895921 GACAGGTGCAGAAAGGGAGGGCCGAAG---AGGCCTGGAATTTTGC-----CAG-CCACACCTTTAGAGAGGCTGTGGT-G i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I a score=174885.000000 s hg38.chr21_KI270874v1_alt 93260 16 + 166743 GGGAAAGAAATCATCA s panTro5.chr21 3718532 16 + 33445071 AGGAAAGAAATCATCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344358 16 + 46275980 AGGAAAGAAATCATCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283709 16 - 13858734 AGGAAAGAAATCATCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466765 16 + 32716333 TGGAAAGAAATCATCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421578 16 - 185818997 AGGAAAGAAATCATCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246146 16 - 192294377 AGGAAAGAAATCATCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727160 16 + 9440265 AGGAAAGAAATCATCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456517 16 + 21915920 AGGAAAGAAATCATCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031389 16 - 90373283 AGGAAAGACGTCATCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210787 16 + 4234846 AGGAAAGAAATCATCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214888 15 - 13750039 AGGAAATAAATC-TCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932499 16 + 50472720 AGGAAACAAATCAGCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035935 16 + 13128814 AGGAAATAAATCATCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611107 16 - 14377064 AGGAAAGAAATCATCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748883 16 + 9889416 AGGAAAGAAATCATCA i aotNan1.NW_018487195v1 C 0 C 0 s mm10.chr16 78133050 16 + 98207768 AGCAATAACTTCACCA i mm10.chr16 C 0 C 0 s canFam3.chr31 13831877 16 + 39895921 GGGAAAGAAGTCATCA i canFam3.chr31 C 0 I 13 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I e otoGar3.GL873528 20758514 0 - 38779656 C a score=50862.000000 s hg38.chr21_KI270874v1_alt 93276 5 + 166743 AGAAT s panTro5.chr21 3718548 5 + 33445071 AGAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344374 5 + 46275980 AGAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283725 5 - 13858734 AGAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466781 5 + 32716333 AGAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421594 5 - 185818997 AGAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246162 5 - 192294377 AGAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727176 5 + 9440265 AGAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456533 5 + 21915920 AGAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031405 5 - 90373283 AGAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210803 5 + 4234846 AGAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214903 5 - 13750039 AGAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932515 5 + 50472720 AAAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035951 5 + 13128814 AAAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611123 5 - 14377064 AAAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748899 5 + 9889416 AAAAT i aotNan1.NW_018487195v1 C 0 C 0 s mm10.chr16 78133066 5 + 98207768 AGAGA i mm10.chr16 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I e otoGar3.GL873528 20758514 0 - 38779656 C e canFam3.chr31 13831893 13 + 39895921 I a score=1010696.000000 s hg38.chr21_KI270874v1_alt 93281 126 + 166743 ACATGCAaagtttgtgaaggagtataaaaacacagttagataaaaagaatagagaagttctagtattcataagtagaatataaaaattatagttaacaatgacttattgtagattttaaagtagct s panTro5.chr21 3718553 126 + 33445071 ACATGCAaagtttgtgaaggagtataaaaacacagttagataaaaagaatagagaagttctagtattcataagtagaatataaaaattatagttaacaatgacttattgtagattttaaagtagct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344379 126 + 46275980 ACATGCAaagtttgtgaaggagtataaaaacacagttagataaaaagaatagagaagttctagtattcataagtagaatataaaaattatagttaacaatgacttattgtagattttaaagtagct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283730 126 - 13858734 ACATGCAaagtttgtgaaggagtataaaaatacagttagataaaaagaatagagaaattctagtattcataagtagaatataaaaattatagttaacaatgacttattgtagattttaaagtagct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466786 126 + 32716333 ACATGCAaagtttgtgaaggagtataaaaatacagttagataaaaagaatagagaagttctagtattcataagtagaatataaaaattatagttaacaatgatttattgtagattttaaagtagct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421599 122 - 185818997 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaaattatagataacaatgatttattgtagattttaaagtagct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246167 122 - 192294377 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaaattatagataacaatgatttattgtagattttaaagtagct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727181 122 + 9440265 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaaattatagataacaatgatttattgtagattttaaagtagct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456538 122 + 21915920 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaaattatagataacaatgatttattgtagattttaaagtagct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031410 122 - 90373283 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaatttatagataacaatgatttattgtagattttaaagtagct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210808 122 + 4234846 ACATGCAaagtttgtgaaagagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaatagaaaaattatagataacaatgatttattgtagattttaaagtagct i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 214908 117 - 13750039 ACATGCAaggtttgtgaaggagtataaaaatatggttagatagaaggaat----aagttctagtattcataagtacaagagaaaaattatagttaacaatgatttattgtagattt-----tagct i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932520 115 + 50472720 ATGTGCAACACTTT-------gtataacaatacagttagatagaaagaat----aagttctagtattcataagtacaatcaaaaaattatagttaacaataatttattatagatttcaaagtagct i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5035956 111 + 13128814 ATGTGCAACATTTT-------gtataacaatacagt----tagaaagaat----aagttctagtattcataagtacaatcaaaaaattatagttaacaataatttattgtagatttcaaagtagat i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611128 102 - 14377064 ATGTG-----TTTT-------GTATA-----acagttagatagaaagaat----aagttccagtattcataagtacaatcaaaaaattacagtt---aataatttattgtagacttcaaagtagct i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8748904 111 + 9889416 ATGTGCAACATTTT-------gtataacaatacagt----tagaaagaat----aagttctagtattcataactacaatcaaaaaattatagttaacaataatttattatagatttcaaagtaggt i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I e otoGar3.GL873528 20758514 0 - 38779656 C e canFam3.chr31 13831893 13 + 39895921 I e mm10.chr16 78133071 0 + 98207768 C a score=68616.000000 s hg38.chr21_KI270874v1_alt 93407 10 + 166743 aggaaagaaa s panTro5.chr21 3718679 10 + 33445071 aggaaagaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344505 10 + 46275980 aggaaagaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283856 10 - 13858734 aggaaagaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466912 10 + 32716333 aggaaagaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421721 10 - 185818997 cggaaagaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246289 10 - 192294377 cggaaagaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727303 10 + 9440265 cggaaagaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456660 10 + 21915920 cggaaagaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031532 10 - 90373283 aggaaagaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210930 10 + 4234846 aggaaagaaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215025 10 - 13750039 aggaaagaaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932635 7 + 50472720 ag---aaaaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036067 8 + 13128814 ag--aaaaaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611230 8 - 14377064 ag--taaaaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749015 8 + 9889416 ag--aaaaaa i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20758514 10 - 38779656 AGGAAAGAAA i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I e canFam3.chr31 13831893 13 + 39895921 I e mm10.chr16 78133071 0 + 98207768 C a score=1360859.000000 s hg38.chr21_KI270874v1_alt 93417 140 + 166743 aattgcaatgttcctaacacaaaggaaagataaatgtctaaggtggtggatatcccaattaccctga-tttgatcattacacattgtatacatgtatcaaaataccatatgt----------------accccaaaaatatgtccagctattatata s panTro5.chr21 3718689 140 + 33445071 aattgcaatgttcctaacacaaaggaaagataaatgtctaaggtggtggatatcccaattaccctga-tttgatcattacacattgtatacatgtatcaaaataccatatgt----------------accccaaaaatatgtccagctattatata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344515 140 + 46275980 aattgcaatgttcctaacacaaaggaaagataaatgtctaaggtggtggatatcccaattaccctga-tttgatcattacacattgtatacatgtatcaaaataccatatgt----------------accccaaaaatatgtccagctattatata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3283866 140 - 13858734 aattgcaatgttcctaacataaaggaaagataaatgtctaaggtgatggatatcccgattaccctga-tttgatcattacacattgtatacatgtatcaaaataccatatgt----------------accccaaaaatatgtccagctattatata i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4466922 140 + 32716333 aattgcaatgttcctaacacaaaggaaagataaatgtttaaggtgatggatatcccaattaccctga-tttgatcattacacattgtatacacgtatcaaaataccacgtgt----------------accccaaaaacatgtacagctattatata i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421731 140 - 185818997 aattgcaatgttcctaacacaaatgagagataaatgtttaaggcgatggatatcccaattaccctga-tttgatcattacacgttgtatacacatatcaaaataccacatgc----------------accccaaaaatatgtacagctattatcta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246299 140 - 192294377 aattgcaatgttcctaacacaaacgagagataaatgtttaaggcgatggatatcccaattaccctga-tttgatcattacacgttgtatacacatatcaaaataccacatgc----------------accccaaaaatatgtacagctattatcta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727313 140 + 9440265 aattgcaatgttcctaacacaaacgagagataaatgtttaaggcgatggatatcccaattaccctga-tttgatcattacacgttgtatacacatatcaaaataccacatgc----------------accccaaaaatatgtacagctattatcta i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456670 156 + 21915920 aattgcaatgttcctaacacaaaggagagataaatgtttaaggcgatggatatcccaattaccctga-tttgatcattacatgttgtatacacgtatcaaaataccacatgccccaaaataccaaaataccccaaaaatatgtacaactattatcta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031542 140 - 90373283 aattgcaatgttcctaacacaaaggagagataaatgtttaaggtgatggatatcccaattaccctga-tttgatcattacatgttgtatacatgtatcaaaataccacatgc----------------accccaaaaatatgtacagctattatcta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2210940 140 + 4234846 aattgcaatgttcctaacacaaaggagagataaatgtttaaggcgatggatatcccaattaccctga-tttgatcattacacactgtatacacgtatcaaaataccacatgc----------------accccaaaaatatgtacaactattatcta i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215035 140 - 13750039 aattgcaatgttcctaacacaaaggagagataaatgtttaaggcgatggatatcccaattaccctga-tttgatcataacacattgtacacatgtatcaaaatactacatgc----------------accccaaaaatatgtacagctattatcta i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932642 140 + 50472720 aattataattttcccaacacaagggaaagataaatgttcaaggcaatggatatcccaattaccctga-ttttatcattatacattgtatataggtagcaaaataccacatgt----------------accccaaaaatatgtacagctattatata i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036075 141 + 13128814 aattataattttcccaacacaaaggaaagataaatgttcaaggcaatggatatcccaattaccctgatttttatcattacacattgtatacaggtaccaaaataccacatgt----------------accccaaaaatatgtacagctattataaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611238 140 - 14377064 aattataattatcccaacacaaaggaaagataaatgttcaaggcaatggatatcccaattaccctga-ttttatcattacacattgtatacaggtatcaaaataccgcatgt----------------actccaaaaatatgtacagctattatata i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749023 140 + 9889416 agttataattttcccaacacaaaggaaagataaatgttcaaggcaatggatatcccaattaccctga-ttttatcattacacattgtatacaggtatcaaaataccatatgt----------------accccaaaaatatgtacagctattatata i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I e otoGar3.GL873528 20758524 0 - 38779656 C e canFam3.chr31 13831893 13 + 39895921 I e mm10.chr16 78133071 0 + 98207768 C a score=279166.000000 s hg38.chr21_KI270874v1_alt 93557 32 + 166743 tcaataaaaGTAAACAAAATAAGAATTTTAAC s panTro5.chr21 3718829 32 + 33445071 tcaataaaaGTAAACAAAATAAGAATTTTAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344655 32 + 46275980 tcaataaaaGTAAACAAAATAAGAATTTTAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284006 32 - 13858734 tcaataaaaGTAAACAAAATAAGAATTTTAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467062 32 + 32716333 tcaataaaaataaaCAAAATAAGAATTTTAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421871 32 - 185818997 tcaataaaaataaaCAAAATAAGAATTTTAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246439 32 - 192294377 tcaataaaaataaaCAAAATAAGAATTTTAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727453 32 + 9440265 tcaataaaaataaaCAAAATAAGAATTTTAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456826 32 + 21915920 tcaataaaaataaaCAAAATAAGAATTTTAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031682 32 - 90373283 tcaataaaaataaaCAAAATAAGAATTTTAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211080 32 + 4234846 tcaataaaaataaaCAAAATAAGAATTTTAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215175 32 - 13750039 tcaacaaaaataaaCAAAATAAGAATTTTAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932782 28 + 50472720 tc----aataaaaaTACAATAAGATTTTTAAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036216 28 + 13128814 ta----aaaataaaCAAAATAAAAATTTTAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611378 32 - 14377064 tcaataaaaataaaCAAAATAAGAATTTTAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749163 28 + 9889416 tc----aataaaaataaaaTAAGAATTTTAAC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20758524 13 - 38779656 TCAGCAAAAGTAA------------------- i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3599927 560 - 6883506 M e micMur3.chr31 19206488 637 + 47401472 I e canFam3.chr31 13831893 13 + 39895921 I e mm10.chr16 78133071 0 + 98207768 C a score=18462.000000 s hg38.chr21_KI270874v1_alt 93589 2 + 166743 AA s panTro5.chr21 3718861 2 + 33445071 AA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344687 2 + 46275980 AA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284038 2 - 13858734 AA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467094 2 + 32716333 AA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421903 2 - 185818997 AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246471 2 - 192294377 AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727485 2 + 9440265 AA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456858 2 + 21915920 AA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031714 2 - 90373283 AA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211112 2 + 4234846 AA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215207 2 - 13750039 AA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932810 2 + 50472720 AG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036244 2 + 13128814 AG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611410 2 - 14377064 AG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749191 2 + 9889416 AG i aotNan1.NW_018487195v1 C 0 C 0 s dasNov3.JH568778 3600493 2 - 6883506 AA i dasNov3.JH568778 M 560 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19206488 637 + 47401472 I e otoGar3.GL873528 20758537 0 - 38779656 C e canFam3.chr31 13831893 13 + 39895921 I e mm10.chr16 78133071 0 + 98207768 C a score=244426.000000 s hg38.chr21_KI270874v1_alt 93591 24 + 166743 AGTCAATGCAGCACAACACA----ACAA s panTro5.chr21 3718863 24 + 33445071 AGTCAATGCAGCACAACACA----ACAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344689 24 + 46275980 AGTCAATGCAGCACAACACA----ACAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284040 24 - 13858734 AGTCAATGCAGCACAACACA----ACAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467096 24 + 32716333 AGTCAATGcagcacaacaca----acaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421905 24 - 185818997 AGTCAATGCAGCACAACACA----CAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246473 24 - 192294377 AGTCAATGCAGCACAACACA----CAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727487 24 + 9440265 AGTCAATGcagcacaacaca----caaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456860 24 + 21915920 AGTCAATGcagcacaacaca----caaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031716 24 - 90373283 AGTCAATGCAGCACGACACA----CAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211114 24 + 4234846 AGTCAATGCAGCACAACACA----CAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215209 24 - 13750039 AGTTAATGCAGCACAGCACA----CAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932812 24 + 50472720 AGTTGATGCAGCAGAACACA----CCAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036246 24 + 13128814 AGTTAATGCAGCAGAACACA----CTAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611412 24 - 14377064 AGTTGATGCAGCACAACACA----CCAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749193 24 + 9889416 AGTTGATGCAGCAGAACACA----CCAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20758537 21 - 38779656 -----ATGCAACAGAACACA--CCCCAG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78133071 24 + 98207768 AGCCACAGAAGAACAAATCC----CGAA i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3600495 28 - 6883506 AATAGGTGCAGAATAATACATCCCCCAA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19206488 637 + 47401472 I e canFam3.chr31 13831893 13 + 39895921 I a score=3065215.000000 s hg38.chr21_KI270874v1_alt 93615 293 + 166743 AAATCTGGTGGGA-CAACTCACACCCCAGTG------------GAGATCAAC--------------------TCAGGATA-CTGATAGACCATGTGGATTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCCGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAACAGTG----------------ATGGAAAAAGAGCTCTggcccacatgcccctcccctagtgtcatcaggacaatttaagcttctttttgcactcaaat-ac---tgtatt-------agaaggaaga---ggagaaaagaacctttgagagtggaaggaaattttgggagactgagtagtt--accagaa---aaaaa s panTro5.chr21 3718887 293 + 33445071 AAATCTGGTGGGA-CAACTCACACCCCAGTG------------GAGATCAAC--------------------TCAGGATA-CTGATAGACCACGTGGATTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCCGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAACAGTG----------------ATGGAAAAAGAGCTCTggcccacatgcccctcccctagtgtcatcaggacaattaaagtttctttttgcactcaaat-ac---tgtatt-------agaaggaaga---ggagaaaagaacctttgagagtggaaggaaattttgggagactgagtagtt--accagaa---aaaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17344713 292 + 46275980 AAATCTGGTGGGA-CAACTCACACCCCAGTG------------GAGATCAAC--------------------TCAGGATA-CTGATAGACCATGTGGATTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCCGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAACAGTG----------------ATGGAAAAAGAGCTCTggcccacatgcccctcccctagtgtcatcaggacaattaaagtttctttttgcactcaaat-ac---tgtatt-------agaaggaaga---ggagaaaagaacctttgagagtggaaggaaattttgggagactgagtagtt--accag-a---aaaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284064 290 - 13858734 AAATCTGGTGGGA-CGACTCACACCCCAGTG------------GAGATCAGC--------------------TCAGGATA-CTGATAGACCGTGTGGATTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGGACGT---------------------------------------------------------TAGTAACAGTG----------------ATGGAAAAAGAGCTCTGGCCCACATgcccctcccccagtgtcatcaggacaattaaagcttctttttgcattcaaat-ac---tgtatt-------agaaggaaga---ggagaaaaaaacctttgagagtggaaggaaattttgggagactgagtagtt--accag------aaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467120 290 + 32716333 aaatctggtggga-caactcacaccccactg------------gagatcaac--------------------tcaggata-ctgatagaccatgtggattgagctaccctgcaaaaggcagaggctagttccaaagactagctgaggt----------gtctagaggt---------------------------------------------------------tagtaagagtg----------------atggaaaaagagctctggcccacatgcccctcccacagtgtcatcaggacaattaaagcttatttttgcactcaaat-gc---tgtatt-------agaaggaaga---ggagaaaggaacctttgagagtggaaggaaattttgagagactgagtagtt--accag------aaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155421929 296 - 185818997 AAATCTGGTGGGA-CAACTCACGGCCCATTG------------GAGACCAAC--------------------TCAGAATA-CTGATAGATCATGTGGACTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGAGCTGTGGCCTACATGcccctcctgcagcgtcatcaggacaattaaagcttctttttgcactcaaat-ac---tgtatt-------ggaaggaaga---ggagaaaagaacttttgagagtgggaggaaattttgagagactgagtagtt--accaaaaaataaata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246497 296 - 192294377 AAATCTGGTGGGA-CAACTCATGGCCCATTG------------GAGACCAAC--------------------TCAGAATA-CTGATAGATCATGTGGACTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGAGCTGTGGCCTACATGcccctcccgcagcgtcatcaggacaattaaagcttctttttgcactcaaat-ac---tgtatt-------ggaaggaaga---ggagaaaagaacttttgagagtgggaggaaattttgagagactgagtagtt--accaaaaaataaata i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727511 296 + 9440265 aaatctggtggga-caactcacggcccattg------------gagaccaac--------------------tcagaata-ctgatagatcatgtggactgagctaccctgcaaaaggcagaggctagttccaaagactagctgaggt----------gtctggaggt---------------------------------------------------------tagtaagagtg----------------atggaaaaagagctgtggcctacatgcccctcccgcagcgtcatcaggacaattaaagcttctttttgcactcaaat-ac---tgtatt-------ggaaggaaga---ggagaaaagaacttttgagagtgggaggaaattttgagagactgagtagtt--accaaaaaataaata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8456884 296 + 21915920 aaatctggtggga-caactcatggcccagtg------------gagaccaac--------------------tcagaata-ctgatagatcatgtggactgagctaccctgcaaaaggcagaggctagttccaaagactagctgaggt----------gtctggaggt---------------------------------------------------------tagtaagagtg----------------atggaaaaagagctgtggcctatgtgcccctcccgcagcgtcattgggacaattaaagcttctttttgcactcaaat-ac---tgtatt-------ggaaggaaga---ggagaaaagcacttttgagagtgggaggaaattttgagagactgagtagtt--accaaaaaataaata i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15031740 296 - 90373283 AAATCTGGTGGGA-CAACTCACGGCCCAGTG------------GAGACCAAC--------------------TCAGAATA-CTGATAGATCATGTGGACTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGAAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGGGCTGTGGCCTACATGCCCCTCCCACAGTGTCATCAGGACAATCAAAGCTTCTTTTTGCACTCAAAT-AC---TGTATC-------GGAAGGAAGA---GGAGAAAAGAAACTTTGAGAGTGGGAGGAAATTTTGAGACACTGAGCAGTT--ACCAAAAAATAAAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211138 296 + 4234846 AAATCTGGTGGGA-CAACTCATGGCCCAGTG------------GAGACCAAC--------------------TCAGAATA-CTGATAGATCATGTGGACTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGAGCTGTGGCCTACGTGcccctcccgcagcgtcatcaggacaattaaagcttctttttgcactcaaat-ac---tgtatt-------ggaaggaaga---ggagaaaagcacttttgagagtgggaggaaattttgagagattgagtagtt--accaaaaaataaata i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215233 296 - 13750039 AAATCTGGTGGGA-CAACTCATGGCCCAGTG------------GAGACCAAC--------------------TCAGAATA-CTGATAGACCATGTGGATTGAGCTACCCTGCAAAAGGCAGAGGCTAGTTCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGTAAGAGTG----------------ATGGAAAAAGAACTATGGCCTACATGcccctcccacagtaccatcaggacaattaaagcttctttttgcactcaaat-ac---tgtatt-------ggaaggaaga---ggagaaaagaacctttgagaatgggaggaaattttgagaaactgagtagtt--accaaaaaataaata i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21932836 304 + 50472720 AAATCTGGTGGGA-TAACTCACACTCCAGTA------------GAGATCAACTCAGGATACTGATCTATCTATCAGGATA-CTGATAGACCACGTGGATTGAGCTACCCTGCAAAAGGCAGAGG-TAGTGCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGCAAGAGTG----------------ACAGAAAAAGAGCTGTGGCCCACATGGCCCCCCTCCAGTGTCATCAGGAC-ATTAAAGCTTCTCTTTGCATTGAAAT-AC---TGTATT--------GAAAGAAGA---GGAGAAAAGAAAC-TTAATGGTGGAAGGAAATTTTGAGAGACTGAGTAGTT--AACAGC--------A i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036270 283 + 13128814 AAATCTGCTGAGA-CAACTCACACACCAGTA------------GAGATCAAC--------------------TCAGGATA-CGGACAGACCACGTGGATTGAGCTACCCTGCAAAAGGCAGAGG-TA-TGCCAAAGACTAGCTGAGGT----------GTCTGGGGGT---------------------------------------------------------CAGCAAGAGTG----------------ATGGAAAAAGAGCTATGGTCCACACGGCCCTCCCCCAGTGTCATCAGGAC-ATTAAAGCTTCTCTTTGCATTCAAAT-AC---TGTATT--------GACAGAAGA---GGAGAAAAGAAAC-TTAATGATGGAAGGAAATTTTGAGAGACTGAGTAGTT--AACATT--------A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611436 284 - 14377064 AAATCTGGTAGGATCAACTCACACACCAGTA------------GAGATCAAC--------------------TCAGGATA-CTGAAAGACCACGTAGATTGAGCTACCCTGCAAAAGGCAGAAG-TAGTGCCAAAGACTAGCTGAGGT----------CTCTGGAGGT---------------------------------------------------------TAGCAAGAGTG----------------ATAG-AAAAGAGCTGTGGTCCACATGGCCCTCCTCCAGTGTCATCAGGAC-ATTAAAGCTTCTCTTTGCATTCAAAT-AC---GGTATT--------GAAAGAAGA---GGAGAAAAGAAAC-TTAATGGTGGAAGGAAATTTTGAGAGACTGAGTAGTT--AACAGT--------G i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749217 288 + 9889416 AAATCTGGTGGGA-GAACTCACACACCAGTA------------GAGATCAAC--------------------TCAGGATA-CTGATAGACCACGTGGATTGAGCTACCCTGCAAAAGGCAGAGG-TAGTGCCAAAGACTAGCTGAGGT----------GTCTGGAGGT---------------------------------------------------------TAGCAAGAGTG----------------ATAGAAAAAGAGTTGTGGTCCACATGGCCCTCCTCCAGTATCATCAGGAC-ATTAAAGCTTCTCTTTGCATTGAAAT-AC---TGTATT--------GAAAGAAGA---GGAGAAAAGAAAC-TTAATGGTGGAAGGAAATTTTGAGAGACTGAGTAGTT--AACAGTA----AAAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20758558 287 - 38779656 GAATCTGGTGGAA-CAATTCACATCCCAATG------------GGAATCATC--------------------TTGGCATA-CTGACCGGCCACATGGAGCAGGGGAGCCTGCAGAAGACAAAGACTGGGGCCAAAGACCAGCAGAGAT----------GGGTGGAGGC---------------------------------------------------------CAGTGAGCAAG----------------AGTGGAGAAAAGCCTTGGCCCTAGATTCCATTCCCCAGTGTCACAAGAAC-ATAAAAACTCCCTTTTGCACCCAAAT--C---CATATT------GGGAAAAGGGG---GGAGAAGAGAACTCTTGAGTGTGGGAAGAAAATTTGAGAGATGGAGTAATTAGAACAG---------- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78133095 349 + 98207768 AA--CTGGTGAGA-CAAATTACACTTAAGTG------------GAGATCAAA--------------------TCATTATA-TGAACAGAAAATATAGACCAGAATATTGTGCAAATGACAGAGA--GATGCCAAACAC-AGGTGAGGTAAGCATGGGGGGCTGGGTGTCACAGCCAAAATGGTCCTCTTCAAATGGCATAAAAGACATAAGACAGAGGAGTACCATAGCCAAAGTAGCCCCCTTCTAAAGACATAAGAGAAGTACTATGGCCAATGTGGCCCTCTTATGATGCTATGAAGACA--TAAAGTTTCATTCTGCATAAAAAT-GT---CATCTTTGGTAGGAAAAGGAAGA---GGACAAGATCACT--------TGAGAAGAAAATTT---------AGCAATA--AA------------- i mm10.chr16 C 0 C 0 s canFam3.chr31 13831906 308 + 39895921 AACCACCGCGGGA-CAATGCACACCTCAGCG------------GAGACCAGC--------------------GCAGGAGAGCTGATGCA-CAGGTGAGCCAGCCTA-CCTGCAAAAGACAGAGACGGGCCCCGAAGACCTGGAGAAGC---------GGGCTGCACAA---------------------------------------------------------CAGCGAGAGCG---AGTGGTCGGGGCCACAGGAGAAGGACTGCggtccggatgcccctccc-cacggccccaaggac-acaaaagcttccttctgcccccagatgac---cccctt------gggaaggaggagagggagaagagaagccttaaaag----agaaaattttgagagactgagaaatt--accaaaaaaaacaaa i canFam3.chr31 I 13 I 2 s dasNov3.JH568778 3600523 285 - 6883506 --AAACAGTGAGA--AATTCAAACCTCAGTTTAAATTGAACTCAAGATGATT--------------------TCAGGATA-TTGATAGAGCAGGAGAATCATACAACTCCGGAAAAGACAGTGACTGACGCcaaagacaaacaagaag----------ggcaggaggg---------------------------------------------------------cacagagagtg----------------attggagaaga-------tccatgtgcccctccc-caatgctgtgaggat-ataaaagtttcctcctgcacctaaat-gtccatgtctt------aggaaagagga---agag------------gggagtgggaagaaaattttaaagtctgagcaatt--accagaaaaaaa--- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e micMur3.chr31 19206488 637 + 47401472 I a score=661188.000000 s hg38.chr21_KI270874v1_alt 93908 59 + 166743 aaaaaataagacta----atatgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagatctcatg s panTro5.chr21 3719180 59 + 33445071 aaaaaataagacta----atatgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagatctcatg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345005 59 + 46275980 aaaaaataagacta----atatgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagatctcatg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284354 59 - 13858734 aaaaaataagacta----ctatgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagatctcatg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467410 59 + 32716333 aaaaaataagacta----atatgca-----gaagagactgat--a------catgcttaattg---------------------------------------------gcaagatctcatg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155422225 59 - 185818997 aataaataagacta----atatgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagATCTCATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246793 59 - 192294377 aataaataagacta----atatgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagATCTCATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727807 59 + 9440265 aataaataagacta----atacgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagATCTCATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8457180 59 + 21915920 aataaataagacta----atatgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagATCTCATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032036 59 - 90373283 AATAAATAAGACTA----ATATGCA-----GAACAGACTGAT--A------CATGCTTAACTG---------------------------------------------GCAAGATCTCATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211434 59 + 4234846 aataaataagacta----atatgca-----gaacagactgat--a------catgcttaattg---------------------------------------------gcaagATCTCATG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215529 104 - 13750039 aataaataagacta----atacgca-----gaacagactgat--a------catgcttaattgCTTAATATGCAGAATGCTTAATACGCAGAACAGACTGATACATGCTTAATATCTCATG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933140 59 + 50472720 AAAAAATAAGACTA----ATATTCA-----AAACAGACTGAT--T------CATGCTTAGTTG---------------------------------------------GCAAGATCTCGTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036553 59 + 13128814 AAAAAATAAGGCTA----ATATTCA-----AAACAGACTGAT--C------GATGCTTAGTAA---------------------------------------------GCAAGATCTCGTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611720 59 - 14377064 AAAAAATAAGATTA----ATATTCA-----AAACAGACTGAT--T------CATGCTTAGTTG---------------------------------------------GCAAGATCTCATG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749505 51 + 9889416 AAAAAAAAAGACTA----ATATTCA-----AAACAGACTGAT--T------CATGCTT-----------------------------------------------------AGATCTCGTG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19207125 59 + 47401472 aaaaaataaaacta----atattca-----gaacagacGGAT--A------CCTGTTTAAATG---------------------------------------------GCAAGATCATATG i micMur3.chr31 I 637 C 0 s otoGar3.GL873528 20758845 56 - 38779656 AACAAATAAAACTA----ATATTCA-----GAACAGACTGAT--A------CATGTTTAAATG---------------------------------------------GCAAGATCAC--- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78133444 66 + 98207768 GCAAAATGACAGTATTTGCTATGAA-----CAAGTGATCTAT--AATATGTAGTGTTTAAATG---------------------------------------------GCAAACTCTT--- i mm10.chr16 C 0 C 0 s canFam3.chr31 13832216 63 + 39895921 aaaaaaaaagactg----acactaa-----caacagactgat--a--acgttaagtttAAAAA---------------------------------------------GCATGAGAATAGA i canFam3.chr31 I 2 C 0 s dasNov3.JH568778 3600808 60 - 6883506 ------AAATATTA----ACATTCAAATTGGAACAACCTCATCAG------CATATATTAATG---------------------------------------------GTATGATCTTATG i dasNov3.JH568778 C 0 I 26591 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I a score=461108.000000 s hg38.chr21_KI270874v1_alt 93967 38 + 166743 ctatctgccctcgataag--actgtgtgcctgagaacaaa s panTro5.chr21 3719239 38 + 33445071 ctatctgccctcgataag--actgtgtgcctgagaacaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345064 38 + 46275980 ctatctgccctcgataag--actgtgtgcctgagaacaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284413 38 - 13858734 ctatctgccctcgataag--actgtgtgcctgagaacaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467469 38 + 32716333 ctatctgccctcaataca--actgtgtgcctgagaacaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155422284 38 - 185818997 ATATCTACCCTCAATAGG--ACTGTGTGCCTGCGAACAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246852 38 - 192294377 ATATCTACCCTCAATAGG--ACTGTGTGCCTGCGAACAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727866 38 + 9440265 ATATCTACCCTCAATAGG--ACTGTGTGCCTGCGAACAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8457239 38 + 21915920 ATATCTACCCTCAATAGG--ACTGTGTGCCTGCGAACAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032095 38 - 90373283 ATATCTACCCTCAATAGG--ACTGTGTGCCTGCAAACAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211493 38 + 4234846 ATATCTACCCTCAATAGG--ACTGTGTGCCTGCGAACAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215633 38 - 13750039 ATATCTACCCTCAATAGG--ACTGTGTGCCTACGAACAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933199 38 + 50472720 ATATCTGCCCTCAATAGG--ACTGTGTGCCTGAGAATAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036612 38 + 13128814 ATATCTACCCTCAATAGG--ACTGTGTGCCTGAGAACAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611779 38 - 14377064 ATATCTACCCTCAATAGG--ACTGTGTGCCTGAGAATAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749556 37 + 9889416 GTATCTACCCTCAATAGG--ACTGTGTGCCTGAGAACAA- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19207184 38 + 47401472 ATATCTACCCTCAATAGG--ACTGGGTGCTTAAGAACAAA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20758901 38 - 38779656 ATATCTGTCCTTGAGAGG--ACTGGGTGCCTAAGAACAAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78133510 26 + 98207768 --------------TAGGCCACTGGCTACCTGAGAACTCA i mm10.chr16 C 0 C 0 s canFam3.chr31 13832279 27 + 39895921 CCAACCCCCCTCAA------A-------CCTGAGAACAGA i canFam3.chr31 C 0 I 1557 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I a score=1648628.000000 s hg38.chr21_KI270874v1_alt 94005 132 + 166743 atgagatgttatagaacacaaaCATCTCGTTTATA----ATTTACCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAACTTCACTGTATATATATAGTCATGCAATTTGGGCTAAAATGTGAGAAGCC s panTro5.chr21 3719277 136 + 33445071 atgagatgttatagaacacaaaCACCTCATTTATAATTTATTTACCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAACTTCACTGTATATATATAGTCATGCAATTTGGGCTAAAATGTGAGAAGCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345102 136 + 46275980 atgagatgttatagaacacaaaCATCTCATTTATAATTTATTTACCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAACTTCACTGTATATATATAGTCATGCAATTTGGGCTAAAATGTGAGAAGCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284451 136 - 13858734 atgagatgttatagaacacaaaCATCTCATTTATAATTTATTTACCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAACTTCACTATATATATATAGTCATGCAATTTGGGCTAAAATGTGAGAAGCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467507 136 + 32716333 atgagatgttatagaacacaaaCATCTCGTTTATAATTTATTTACCTTACATTTCTGTTTCTCAATTAATGATGATTCAAACTGAATTTCACTATATATATATAGTCACGCAATTTGGGCTAAAATGAGAGAAGCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155422322 134 - 185818997 ATGACATGTTACAGAACACAAACATCTTGTTTATAATTTATTTACCTTACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAC--CATATACATAGCCATGCAATTTGGGCTAAAATGTGAGAAGCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162246890 134 - 192294377 ATGACATGTTACAGAACACAAACATCTTGTTTATAATTTATTTACCTTACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAC--CATATACATAGCCATGCAATTTGGGCTAAAATGTGAGAAGCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8727904 134 + 9440265 ATGACATGTTACAGAACACAAACATCTTGTTTATAATTTATTTACCTTACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAA--TATATACATAGCCATGCAATTTGGGCTAAAATGTGAGAAGCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8457277 134 + 21915920 ATGACATGTTACAGAACACAAACATCTCGTTTACAATTTATTTACCTCACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TATATACATAGCCATGCAATTTGGGCTAAAATGTGAGAAGCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032133 134 - 90373283 ATGAGATGTTACAGAACATAAACATCTCGTTTATAATTTATTTACCTTACATTTCTGCTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TATATACATAGCCATGCAATTTGGGCTACAATGTGAGAAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211531 134 + 4234846 ATGACATGTTACAGAACACAAACAGCTCGTTTATAATTTATTTACCTTACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TATATACATAGCCATGCAATTTGGGCTAAAATGTGAGAAGCC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215671 134 - 13750039 ATGAGATGTTACAGAACACAAACATCTCGTTTATAATTTATTTACCTTACATTTCTGTTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TATATACACAGTCATGCAATTTGGGCTAAAATGTGAGAAGCC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933237 130 + 50472720 ---AGATGTTATTGAGCACAAACATATCATTTATAATTTATTTACCTTACATTTCT-CTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TGTATACATGGTCATGCAATTTGGGGTAAAATATGAGAAGCC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036650 133 + 13128814 AGGAGATGTTAGAGAACACAAACATCTCATTTATAATTTATTTACCTTACATTTCT-CTTCCCAATTAATGATGATTCAAACTGAACTTCAC--CGTATATATGGTCATGCAATTTGCGGTAAAATGTAAGAAGCC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611817 133 - 14377064 AGGAGATGTTATAGAACACAAACATCTCATTTATAATTTATTTACCTTACATTTCT-CTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TGTATATATGATCATGCAATTTGCGGTAAAATGTAAGAAGCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749593 130 + 9889416 ---AAAGGTTAAAGAACACAAACATCTCATTTATAATTTATTTACCTTACATTTCT-CTTCCCAATTAATGATGATTCAAACTGAACTTCAC--TGTATATATGGTCATGCAATTTGCGGTAAAATGTAAGAAGCC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19207222 132 + 47401472 CTGAGATGTTATAGAATATAAacatctcatttatatttcacttacattacattacTGCTTCCCTAGTTGTGAGTATTCAAACTGAACTTCAT--CATA--TATAGTCAGGCAATTTGCAGTAAAATGTGAGAAGCC i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20758939 129 - 38779656 ATGACATGTTAGAGAATTAAAACATCTCGTTCATATTTCACTTACACTGCATTTCTGCTTCCCAAATTGAGATCGTTCAAACTGAACTTCCC--CATAGGTAGAGTCATGCATTTTG-----GAAGGTGCGAAGTC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78133536 113 + 98207768 GTGAAATATTAGTAGCTATAAACACCTCACTTATA-----------TTGATTTTCTGCTTCCCAGTTTGTGATCATCCAAACCAGTCTTTAC--CATATAGATGTTCACA----------TAGAATATGAGAAGCC i mm10.chr16 C 0 I 315 s canFam3.chr31 13833863 111 + 39895921 ATGAGATATGATAGAACATAGAG-----------------------CTACATTTCTGCTTCCCAACTTGTGACTGTTCAAACTGAACTTCAC--CATGTGCATAGTGATTCAATTTGGGGTAGAATATGAAAGGCC i canFam3.chr31 I 1557 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I a score=2553036.000000 s hg38.chr21_KI270874v1_alt 94137 234 + 166743 AATAGGACATCCATGGAAAGATGGCCCAGTATGTctaaagacatagatttggaagttattggcatataggtcatgttggagtcatgtaagtgaatgaattatcaagggc--agaaagaagagag------aggaaaa-aaggtagaactcctgagtaacaccaatagttatgggatgt-------------------------agacagagaaattactagaaggaata----aacagagaggttggaaggtaatctagacaccgtggtgca s panTro5.chr21 3719413 234 + 33445071 AATAGGACATCCATGGAAAGATGGCCCAGTATGTctaaagacatagatttggaagttattggcatacaggtcatgttggagtcatgtaagtgaatgaattatcaagggc--agaaagaagagag------aggaaaa-aaggtagaactcctgagtaacaccaatagttatgggatgt-------------------------agacagagaaattactagaaggaata----aacagagaggttggaaggtaatctagacaccgtggtgca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345238 234 + 46275980 AATAGGACATCCATGGAAAGATGGCCCAGTATGTctaaagacatagatttggaagttattggcatacaggtcatgttggagtcatgtaagtgaatgaattatcaagggc--agaaagaagagag------aggaaaa-aaggtagaactcctgagtaacaccaatagttatgggatgt-------------------------agacagagaaattactagaaggaata----aacagagaggttggaaggtaatctagacaccgtggtgca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284587 234 - 13858734 AATAGGACATCCATGGAAAGATGGCCCAGTATGTctaaagacacagatttggaagttattggcatacaggtcatgttggagtcatgtaagtgaatgaattatcaagggc--agaaagaagagag------aggaaaa-aaggtagaactcctgagtaacaccaatagttatgggatgt-------------------------agacagagaaattactagaaggaata----aacagagaggttggaaggtaatctagacaccgtggtgca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467643 234 + 32716333 AATAGGACATCCATGGAAAGATGGCCCAGTTTGTctaaagacatagatttggaagttattggcatacaggtcatgttggagtcacgtaagtgaacgaattatcaagggc--agaaagaagagag------aggaaaa-aaggtagaactcctgagtaacaccaatagttatgggatgt-------------------------agacagagaaattactagaaggaata----aacagagaggttggaaggtaatctagacaccgtggtgca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155422456 233 - 185818997 AATAGGACATCCATGGAAAGATGACCTAGTATACctaaagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattataaagggt--agaaagaagagag------aggaaaa-aa-gtagaactcctgagtaataccaaaaattatgggatgt-------------------------agacagagaaattaccagaaggaata----aacagagaggttggaaggtaaactagacactgtggtgca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162247024 233 - 192294377 AATAGGACATCCATGGAAAGATGACCTAGTATACctaaagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattataaagggt--agaaagaagagag------aggaaaa-aa-gtagaactcctgagtaataccaaaaattatgggatgt-------------------------agacagagaaattaccagaaggaata----aacagagaggttggaaggtaatctagacactgtagtgca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728038 233 + 9440265 AATAGGACATCCATGGAAAGATGACCTAGTATACctaaagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattataaagggt--agaaagaagagag------aggaaaa-aa-gtagaactcctgagtaataccaaaaattatgggatgt-------------------------agacagagaaattaccagaaggaata----aacagagaggttggaaggtaatctagacactgtggtgca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8457411 233 + 21915920 AATAGGACATCCATGGAAAGATGACCTAGTCTACctaaagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattaaaacgggc--agaaagaagagag------aggaaaa-aa-gtagaactcctgggtaataccaataattatgggatgt-------------------------agacagagaaattaccagaacgaata----aacagaggggttggaaggtaatctagacaatgtggtgca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032267 233 - 90373283 AATAAGACATCCATGGAAAGATGGCCTAGTATACctaaagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattataaagggc--agaaagaagagag------aggaaaa-aa-gtagaactcctgggtaataccaataattatgggatgt-------------------------agacagagaaattaccagaaggaata----aacagagaggttggaaagtaatctagacaatgtggtgca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211665 233 + 4234846 AATAGGACATCCATGGAAGGATGACCTAGTATACCCAAagacatagatttgcaagttattggcatacaggtcatgttggagtcatggaagtgaatgaattataaagggc--agaaagaagagag------aggaaaa-aa-gtagaactcctgagtaacaccaaaaattatgggatgt-------------------------agacagagaaattaccagaaggaata----aacagaggggttggaaggtaatctagacaatgtggtgca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 215805 233 - 13750039 AATAGAACATCCATGGAAAGTTGGCCTAGCACACctaaagacatagatttgcaagttattggcatacaggtcacgttggagtcatggaagtgaatgaattataaagggc--agaaagaagagag------aggaaaa-aa-gtagaactgctgagtaatatcaataattatgggatgt-------------------------agacagagaaattaccagaaggaata----aacagagaggttagaaggcaatctagacaacgtggtgca i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933367 215 + 50472720 AATAGGACATCCATGAAAAGATGGCTCAGTATGTCT-Aagacacgtacttggaagttattggcaaacaggtcatgttagagtcatggaagtgtat-----------------aaaagaagagag------agg-aaa-atggtaaaattcctgagtaacaccaatagttataggatat-------------------------agacagagaaattactagaaggaata----aacagagaggttggaaggtaatccagacattgtggtg-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036783 212 + 13128814 AATAGGACATCCATGAAAAGATGGCTCGGTATGTCTAAAGACACATATTTGGAAGTTATTGGCATACAGGTCATGTTGGAGTCATGGAAGTGAAC-----------------AAAAGAAGAGAG------AGG-AAA-ATGGTAGAATTCCTGAATAACACCAATAGTTATAAGATAT-------------------------AGACAGAGAAATTACTAGAAGGAATA----AAC----AGGTTGGAAGGTAATCCAGACATTGTGGTG-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9611950 217 - 14377064 AATAGGACATCCATGAAAAGATGGCTCAGTATGTctaaagacacatatttggaagttattgacatacaggtcatgttggagtcatggaagtggat-----------------aaaagaagagag------aggaaaa-atcgtagaattcctgaatgacaccaatagttataggatat-------------------------agacagagaaattactagaaggaata----aacagagaggttggaaggtaatccagacattgtggtg-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749723 216 + 9889416 AATAGGACATCCATGAAAAGATGGCTCAGTATGTctaaagacacatatttggaagttattggcatacaggtcatgttggagccatggaagtagat-----------------aaaagaagagag------aggaaaa-atggcagaattactgagtaacaccaatagttataggatgt-------------------------agacagagaaattactagaaggaata----aacagagaggttggaaggt-atctagacactgtggtg-- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19207354 234 + 47401472 TATATAACATCCATGTGAAGCTGGCCCGCTATGTctgcagacatagatttagaagtcattggcatatacgtcatgttggagtcatggaagtggatggagcagccagagaagagaaagcagaaaa------agaaaaacaagttagaattcctgggtagcaccaatattta-aggatat-------------------------agagaaagaaattattagaaggaata----aacagaaa--ttagaaggtaatccagacactatggtgca i micMur3.chr31 C 0 I 141 s otoGar3.GL873528 20759068 251 - 38779656 TATAGGACATCCAT-TGAAGATGGCCCACTGTGTCTAACAAGACAGATTTGGAGCTCATT-GCATATAAGTCATGTTGGAGTCATGGACATGGATGAAGCAAACAGAGA--AGAAAACAGAAAA------AGAAATA-AAGGTCGAATTCCTGGGTAACACCATATGGGA-AGGATATATATGTGAAAGGGAGCACACGCACAAGAGAGAGAAATTATTAGAAGGAATA----GAGAGAGA--TTGGAAAGTAATCCAGACACCATGGG--- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13833974 222 + 39895921 TATAGGATAT------------------ATTTGTCTACAGAAA--GATTTGGAAGTCATTGGTATATATGTCATGCTGGAATAATGGATGTAGATAAAGTAGCAACAGC--AGAAGGTGGAGAATAACATAGAAGGA-AAAGTCAGAAACATGGGTAACATCCATATTTAAAGGAAAG-------------------------AGAGGGAGAAATTACTAGAAGAAACAAAGGAACAAACAGATTGGAAAGTAATCCTGAGACTAGGGTA-- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78133649 315 + 98207768 I a score=1315048.000000 s hg38.chr21_KI270874v1_alt 94371 127 + 166743 tgcagaaaacctaagaggagagaaaataattctaaagcgggaataatcaatactgccaaattctgcagaaggggaaaaa-taaggataaggacagaaaagtggccaatagagtctgtatcataaaTCC s panTro5.chr21 3719647 127 + 33445071 tgcagaaaacctaagaggagagaaaataattctaaagcgggaataatcaatactgccaaattctgcagaaggggaaaaa-taaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345472 127 + 46275980 tgcagaaaacctaagaggagagaaaataattctaaagcgggaataatcaatactgccaaattctgcagaaggggaaaaa-taaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284821 127 - 13858734 tgcagaaaacctaagaggagagaaaataattctaaagcgggaataatcaatactgccaaattctgcagaaggggaaaaa-taaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4467877 127 + 32716333 tgcagaaaacctaagaggagagaaaataattctaaagagggaataatcaatactgccaaattctgcagaaggggaaaaa-taagaataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155422689 128 - 185818997 tgcagaaaacctaacaggagagaaaacaaatttaaagagggaataatcaatactgccaaattctgcagaaggaaaaaaactaaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162247257 128 - 192294377 tgcagaaaacctaacaggagagaaaacaaatctaaagagggaataatcaatactgccaaattctgcagaaggaaaaaaactaaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728271 128 + 9440265 tgcagaaaacctaacaggagagaaaacaaatctaaagagggaataatcaatactgccaaattctgcagaaggaaaaaaactaaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8457644 118 + 21915920 tgcagaaaagctaacaggagagaaaacaattctaaagagggaataatcaatactgccaaattctgcagaaggaaaaaaactaaggat----------aagtggccaatagaGTCTGTTTCATAAATCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032500 128 - 90373283 tgcagaaaacctaacaggagagaaaacaattctaaagagggaataatcaatactgccaaattctgcagaagggaaaaaactaaggataaggacagaaaagtggccaatagaGTCTGTCTCATAAATCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2211898 128 + 4234846 tgcagaaaacctaacaggagagaaaacaattctaaagagggaataatcaatactgccaaattctgcagaagggaaaaaactaaggataaggacagaaaagtggccaatagaGTCTGTTTCATAAATCG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216038 128 - 13750039 tacagaaaacctaacaggagagaaaacatatctaaagagggaataatcaacactgccaaattctgcagaagggaaaaaactaaggataaggacagaaaagtggccagtagaGTCTGTTTCATAAATCC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933582 123 + 50472720 --cagaaaacctagaaggagagaaaatatttctaaacagggaataatcaatactgccaaattattcagaaggg-aaaaaataagggtaaggacagaaaagaggccagt--agTCTGTTTTATAAAGCC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5036995 124 + 13128814 --CAGAAAACCTAGGAGAAGAGAAAGTAATTCTAAAGAGGGAATAATCAATACTGCCAAATTATCCAGAAGGGAAAAAAATAAGGATAAGGACAGGAAAGAGGCCAGT--AGTCTGTTTCATAAAGCC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9612167 124 - 14377064 --cagaaaacctaggaggagagaaaataattctaaagagggaatcatcaatactgccaaatcatccagaagggaaaaaaataaggataaggacagaaaagaggccaGC--AGTCTGTTTCATAAAGCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8749939 124 + 9889416 --cagaaaacctaggaggagagaaaataattctaaagagggaataatcaatactgccaaattatccagaaggggaaaaaataaggataaggacagaaaagaggccagt--agTCTGTTTCATAAAGCC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20759319 125 - 38779656 TGCTGAAAACCTAGGAGGAAAGGAAATAATTCC--AGAGGGAAGAATTAATACTTCCAAAAGCTTCAGAGAAAAAGAAG-ACAGGATCAAAACCAAAACAAGGTCAGGAGCATACATTCACGAAAGCC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13834196 122 + 39895921 -ACAGAAAAACTGAGAG--GAGGAAATCATTCTAAAAAGAGAACAATTAACACTGGCAAATTCTTC---GGGGAAAACAGATAGGATACAGACAGAAAAGAGGCCATTAGAGTATTTTCCCTAAAGGC i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19207588 141 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=231048.000000 s hg38.chr21_KI270874v1_alt 94498 22 + 166743 --AGAGAGAGAAGAG-AAAAAA--------ACT s panTro5.chr21 3719774 23 + 33445071 --AGAGAGAAAAGAGAAAAAAA--------ACT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345599 22 + 46275980 --AGAGAGAAAAGAG-AAAAAA--------ACT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284948 23 - 13858734 --AGAGAGAGAAGAGAAAAAAA--------CCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468004 23 + 32716333 --AGAGAGAGAAGAGAAAAAAA--------CCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155422817 23 - 185818997 --AGAGAGAGAAGAGGAAAAAG--------CCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162247385 23 - 192294377 --AGAGAGAGAAGAGGAAAAAG--------CCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728399 23 + 9440265 --AGAGAGAGAAGAGGAAAAAG--------CCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8457762 23 + 21915920 --AGAGAGAGAAGAGGAAAAAG--------CCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032628 23 - 90373283 --AGAGAGAGAAGAGGAAAAAG--------CCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212026 23 + 4234846 --AGAGAGAGAAGAGGAAAAAG--------TCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216166 23 - 13750039 --AGAGGGAGAAGAGGAAAAAG--------CCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933705 22 + 50472720 --GGAAAGAAAAGAG-AAAAAA--------CCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037119 23 + 13128814 --AGAAAGAGGAGAGAAAAAAA--------CCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9612291 23 - 14377064 --AGAAAGAGGAGAGGAAAAAA--------CCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750063 23 + 9889416 --AGAAAGAGGAGAGAAAAAAA--------ACT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19207729 22 + 47401472 --AGAGTGAGAAGAGAAAAAAA--------CT- i micMur3.chr31 I 141 I 47 s otoGar3.GL873528 20759444 22 - 38779656 --AGAGAGAAAAGAGAAAAAAT--------CT- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13834318 33 + 39895921 AAAGGAAGGAAGGAAGGAAAAGGAAAGTGTCCT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78133649 315 + 98207768 I a score=441355.000000 s hg38.chr21_KI270874v1_alt 94520 46 + 166743 AAGACTACAGGTCTATTGTGCCAT-CAATGACTTGAGATATTGCCTT s panTro5.chr21 3719797 46 + 33445071 AAGACTACAGGTCTATTGTGCCAT-CAATGACTTGAGATATTGCCTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345621 46 + 46275980 AAGATTACAGGTCTATTGTGCCAT-CAATGACTTGAGATATTGCCTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3284971 46 - 13858734 AAGACTACAGGTCTATTGTGCCAT-CAGTGACTTGAGATATTGCCTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468027 46 + 32716333 GAGACTACAGGTCTGTTATGCCAT-CAGTGACTTGAGATATTGCCTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155422840 46 - 185818997 AAGATTACAGGTCTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162247408 46 - 192294377 AAGATTACAGGTCTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728422 46 + 9440265 AAGACTACAGGTCTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8457785 46 + 21915920 AAGACTACAGGTCTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032651 46 - 90373283 AAGACTACAGGATTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212049 46 + 4234846 AAGACTATAGGTCTGTTCTGCCAT-CAGTGACTTGAGATCTTGCCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216189 46 - 13750039 AAGACTACAGGATTGCTCTGCCAT-CAGTGACTTGAGATCTTGCCTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933727 46 + 50472720 AAGTCTACAGGTCTGTTGTGCTATCCAGTGACTTGAGATCTTGCCT- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037142 45 + 13128814 AAGTCTACAGGTCTGTTGTGCTGT-CAGTGACTTGAGAACTTGCCT- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9612314 45 - 14377064 AAGTCTACAGGTCTGTTGTGCTAT-CGGTGACTTGAGGTCTTGCCT- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750086 45 + 9889416 AAGTCTACAGGTCTGTTGTGCTAT-CAGCGACCTGAGATCTTACCT- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20759466 39 - 38779656 ----CTAC--GTCTCTTGTGCCGT-CAACGCCCTGAGATCTTTTCT- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13834351 45 + 39895921 AAATCAACAAGTCTGTTGTTCTGT-CAATTCCTTAACACCTTGCCT- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19207751 47 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=2046764.000000 s hg38.chr21_KI270874v1_alt 94566 173 + 166743 AATACTGGCTAACAGAGATATTGTGTCTAACTGAACATCCTAGGAAGTTAATACAGAGGTTACTTCTTCT----TATGCATATTTGAATAATATTAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGTATTTTATGAGCAGGAGGATATC s panTro5.chr21 3719843 173 + 33445071 AATACTGGCTAACAGAGATATTGTGTCTAACTGAACATCCTAGGAAGTTAATACAGAGGTTACTTCTTCT----TATGCATATTTGAATAATATTAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGTATTTTATTAGCAGGAGGATATC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345667 173 + 46275980 AATACTGGCTAACAGAGATATTGTGTCTAACTGAACATCCTAGGAAGTTAATACAGAGGTTACTTCTTCT----TATGCATATTTGAATAATATTAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGTATTTTATGAGCAGGAGGATATC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285017 173 - 13858734 AATACTGGCTAACAGAGATATTGTGTCTAACTGAACATCCTAGGAAGTTAATACAGAGGTTACTTCTTCT----TATGCATATTTGAATAATATTAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGTATTTTATGAGCAGGAGGATATC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468073 173 + 32716333 AATACTGGCTAACAGAGATATTATGTCTAACTGAACATCTTAGGAAGTTAATACAGAGGTTACTTCTTCT----TATGCATATTTGAATAATATCAAATATATTCATGTAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAATATTTTATGAGGAGGAGCATATC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155422886 173 - 185818997 AATACTGGCTAACAGAGATATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTCT----TATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAGAGTATAAGACAGCTATATAATAAATTTACACTAGCATTTTATGAGGAAGAGTATCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162247454 173 - 192294377 AATACTGGCTAACAGAGATATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTCT----TATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAGAGTATAAGACAGCTATATAATAAATTTACACTAGCATTTTATGAGGAAGAGTATCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728468 173 + 9440265 AATACTGGCTAACAGAGATATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTCT----TATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAGAGTATAAGACAGCTATATAATAAATTTACACTAGCATTTTATGAGGAAGAGTATCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8457831 173 + 21915920 AATACTAGCTAACAGAGATATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTCT----TAGGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGCATTTTATGAGGAGGAGTATCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032697 173 - 90373283 AATACTGGCTAACAGAGATATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTCT----TATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGCATTTTATGAGGAGGAGTATCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212095 173 + 4234846 AATACTGGCTAACAGAGATATTATGTCTAACTAAACATCTTAGGAAGTTAACACAGAGGTTACTTCTTCT----TAGGCATATTGGAAGAATATCAAATATATTCATATAGCTATTAAAAAGTATAAGACAGCTATATAGTAAATTTACACTAGCATTTTATGAGGAGGAGTATCTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216235 170 - 13750039 AATACTGGCTAACAGAGATATTATGTCTAACTAAACATCTTAGGAAGTTAACATAGAGGTTACTTCTTCT----TATGCATATTTGAAGAATATCAAATATATTCATATAGCTATTAAAAAGTATAAGA---CTATATAGTAAATTTATACTAGCATTTTATAAGGAGGAGTATGTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933773 168 + 50472720 AATACTGGCTAGCAGAGAAATTATGTCTCACTAAACATCTTAGAAAGTTA--ATAGAGGTTA---CTTCT----TATGCATATTTGAATAATGTAAAATATATTCATATAGCTATTAAAAACAATAAGGCAGCTATATATTAAATTTACACTACAATTTTATGAGCAGGAGTATATC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037187 170 + 13128814 AATACTGGCTAACACAGAAATTATGTCTCACTAAACATCTTAGAAAGTTAATATAGAGGTTA---CTTCT----TATGCATATTTGAATAATGTAAAATATATTCATATAGCTATTAAAAAGAATAAGGCAGCTATATATTTAATTTACACTACAATTTTATGAGCAGGAGTATATC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9612359 170 - 14377064 AATACTGGCTAACACAGAAATTATGTCTCACTAAACATCTTAGAAAGTTAATATAGAGGTTA---CTTCT----TATGCATGTTTGAATAATGTAAAATATATTCATATAGTTATTAAAAAGAATAAGGCAGCTATATATTAAATTTACACTACAGTTTTATGAGCAGGAGTATATC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750131 169 + 9889416 AATACTGGCTAACAGAGAAATTATGTCTCACTAAACATCTTAGAAAGTTAATAAAGAGGTTACTTCTTCT----TATGCATATTTGAATAATGTAAAATATATTCATATAGCTATTAAAAAGAATAAGGCAGCTATA----AAATTTATACTAGAATTTTATGAGCAGAAGTATATC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19207798 172 + 47401472 AACACTGGCTGGCAGAGATATTGTGTCTAAGGAAACATTTTAGAAAGTTAATACAGAGATTACTTCTCCT----TATGCACATTCGAATAACATCAAATATATTCATATATCTATTAAAAACTTTGAGACAGATATATAGTAAATTAACATTAGCATTTTATGAG-AGAAATATTGC i micMur3.chr31 I 47 C 0 s otoGar3.GL873528 20759505 165 - 38779656 AATACTGGCT-ACAGAGATAGTGTGTCTTGGGAAACACTTCAGAAAATTCACACGGAGGTTACTTCTTTT----------CATTTGAATGACATCAAACATATTCATGCATCTATTAAAAACTTTGAGACAGCTATACAATAAATTAACATCTATGTTTTATGAG-CAGACTCTCTC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13834396 166 + 39895921 AATACTGGCTAAGGAGATAATTGTGTCT----AAACATCCTAGGAACTTATTA-AGAGTTTATATCTTCTATGTTACACATATTTGAATAGCATTAAATATATTTATTCAGCTATTTAAAAAT----GACAGCTAT-TAGTAAATT-ACATTAGTATTTTATGAGCATAAATATATC i canFam3.chr31 C 0 I 189 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78133649 315 + 98207768 I a score=518870.000000 s hg38.chr21_KI270874v1_alt 94739 41 + 166743 CAACTGGGT-----------------------------------------------TTCATTTATTCACTTTCATCAAAAAGCTACAA s panTro5.chr21 3720016 41 + 33445071 CAACTGGGT-----------------------------------------------TTCATTTATTCACTTTCATCAAAAAGCTACAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345840 41 + 46275980 CAACTGGGT-----------------------------------------------TTCATTTATTCACTTTCATCAAAAAGCTACAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285190 41 - 13858734 CAACTGGGT-----------------------------------------------TTCATTTATTCACTTTCATCAAAAAGCTACAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468246 41 + 32716333 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTTTCATCAAAAAGCTACAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423059 41 - 185818997 CAACTGGGT-----------------------------------------------CTCATTTCTTCACTTTCATCAAAAAGCTACAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162247627 41 - 192294377 CAACTGGGT-----------------------------------------------CTCATTTCTTCACTTTCATCAAAAAGCTACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728641 41 + 9440265 CAACTGGGT-----------------------------------------------CTCATTTCTTCACTTTCATCAAAAAGCTACAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458004 41 + 21915920 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTTTCATCAAAAAGCTACAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15032870 41 - 90373283 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTTTCGTCAGAAAGCTACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212268 41 + 4234846 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTTTCATCAAAAAGCTACAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216405 41 - 13750039 CAACTGGGT-----------------------------------------------TTCATTTCTTCACTCTCATCCAAAAGCTATAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21933941 41 + 50472720 CAACTGGGT-----------------------------------------------TTCATTTCTTTACTTTCATCAAAAAGCTACAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037357 41 + 13128814 CAACTGGGT-----------------------------------------------TTCATTTCTTTACTTTCATCGAAAAGCTACAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9612529 41 - 14377064 CAACTGGGT-----------------------------------------------TTCATTTCTTTACTTTCATCGAAAAGCTACAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750300 41 + 9889416 CAACTGGGT-----------------------------------------------TTCATTTCTTTACTTTCATCGAAAAGCTACAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19207970 41 + 47401472 CAACTGGAT-----------------------------------------------TTCATTTCTTCACTTTCATCAAAAAGTTACAA i micMur3.chr31 C 0 I 579 s otoGar3.GL873528 20759670 33 - 38779656 T-----GAT-----------------------------------------------TTCATTTCTTCATGTTCATCATAAAGTGA--- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13834751 88 + 39895921 caactgagccactcaggcgccccTCTATCAGGGTTTAAATGCATGGTTCTTCAGTGTTCATTTCTTCACTTTCATCAAAAAGTTACAA i canFam3.chr31 I 189 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78133649 315 + 98207768 I a score=1254831.000000 s hg38.chr21_KI270874v1_alt 94780 117 + 166743 ATAAGACACTGTCCATTTGTGTT-ACAATTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGAGTCAAGAAGAGAGAATGGAAGAAACTGATGAG-AAAA s panTro5.chr21 3720057 116 + 33445071 ATAAGACACTGTCCATTTGTGTT-ACAATTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGC---AATT-AATGAGTCAAGAAGAGAGAATGGAAGAAACTGATGAG-AAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345881 116 + 46275980 ATAAGACACTGTCCATTTGTGTT-ACAATTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGC---AATT-AATGAGTCAAGAAGAGAGAATGGAAGAAACTGATGAG-AAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285231 117 - 13858734 ATAAGACACTGTCCATTTGTGTT-ACAATTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGAGTCAAGAAGAGAGAATAGAAGAAACTGATGAG-AAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468287 117 + 32716333 ATAAGACACTATCCATTTGTGTT-ACAATTCTTTGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGAGTCAAGAAGAGAGAATAGAAGAAACTGATGAG-AAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423100 117 - 185818997 ATAAGACACTGTCCATTTGTGTC-ACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGAGTCAAGAAGAGAGAATAGAAGAAATTGGTGAG-Aaaa i rheMac8.chr3 C 0 I 9 s macFas5.chr3 162247668 117 - 192294377 ATAAGACACTGTCCATTTGTGTC-ACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGAGTCAAGAAGAGAGAATAGAAGAAATTGGTGAG-Aaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728682 117 + 9440265 ATAAGACACTGTCCATTTGTGTC-ACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGAGTCAAGAAGAGAGAATAGAAGAAATTGGTGAG-aaaa i macNem1.NW_012019910v1 C 0 I 9 s cerAty1.NW_012002954v1 8458045 117 + 21915920 ATAAGACACTGTCCATTTGTGTC-ACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGAGTCAAGAAGAGAGAATAGAAGAAATTGGTGAG-aaaa i cerAty1.NW_012002954v1 C 0 I 9 s chlSab2.chr2 15032911 117 - 90373283 ATAAGACACTGTCCATTTGTGTC-ACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGAGTCAAGAAGAGAGAATAGAAGAAATTGGTGAG-AAAA i chlSab2.chr2 C 0 I 5 s manLeu1.NW_012102865v1 2212309 110 + 4234846 ATAAGACACTGTCCATTTGTGTC-ACAATTCCTTGTATGCCTGCTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAAT-------GAAGAGAGAATAGAAGAAATTGGTGAG-aaaa i manLeu1.NW_012102865v1 C 0 I 9 s colAng1.NW_012120598v1 216446 117 - 13750039 ATAAGACACTGTCCATTTGTGTT-ACAATTCCTCGTATGCCTGTTGGTCCATTCTCTGTACTAGTTATTTGC---AATTAAATGACTCAAGAAGAGAGAATAGAAGAAATTGGTGAG-AAAA i colAng1.NW_012120598v1 C 0 I 5 s calJac3.chr21 21933982 117 + 50472720 AAAAGATAGTGTCCATTTGTATT-ACAATTCCTTGTATGCTTGTCCATCTCTTCTCTGTACTAGGTATTTGC---AATTAAATGAGCCAGGAAGAGAGGATAGAAGAAACTGATGAA-AACA i calJac3.chr21 C 0 I 5 s saiBol1.JH378168 5037398 117 + 13128814 AAAAGATAGTATCCATTTGTGTT-ACAATTCCTTGTATGCTTGTCCATCTTTTCTCTGTACTAGTTATTTGC---AATTAAATGAGCCAAGAAGAGAGGATAGAAGAAACTGATGAG-AAAA i saiBol1.JH378168 C 0 I 5 s cebCap1.NW_016107322v1 9612570 118 - 14377064 AAAAGATAGTGTCCATTTGTGTT-ACAATTCCTTGTATGCTTGTCCATCTCTTCTCTGTACTAGTTATTTGC---AATTAAATGAGCCAAGAAAAGAGGATAGAAGAAACTGATGAGAAAAA i cebCap1.NW_016107322v1 C 0 I 5 s aotNan1.NW_018487195v1 8750341 118 + 9889416 AAAAGATAGTGTCCATTTGTGTTAACAATTCCTTGTATGCTTGTCCATCTCTTCTCTGTACTAGTTATTTGC---AATTAAATGAACCAAGAAGAGAGGATAGAAGAAACTGATGAG-AAAA i aotNan1.NW_018487195v1 C 0 I 5 s otoGar3.GL873528 20759703 109 - 38779656 GTAGGACAGTGCCCACTTGAGTT-ACAGTCCATTGTACACGTG----TCCATGCTCTGTATTTGCCCTC-------AATAAATGAGACAAGAAGAAAGGACAAAAGAGACTAATGAG-AAAA i otoGar3.GL873528 C 0 I 5 s canFam3.chr31 13834839 116 + 39895921 ATAGGACTGTGCTCATTTCTGTT-ACAGTGGATTGTATACCAG----TCCATGCTCTCTAATATCTATTTGCCCTCAATAAATGAGACAGCAAGAAAGGAGAGAAGAAACTTACGCG-AGAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19208011 579 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=39812.000000 s hg38.chr21_KI270874v1_alt 94897 9 + 166743 ------------AGTACACTT s panTro5.chr21 3720173 9 + 33445071 ------------AGTACACTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17345997 9 + 46275980 ------------AGTACACTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285348 9 - 13858734 ------------AGTACACTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468404 9 + 32716333 ------------AGTACACTT i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162247785 8 - 192294377 -------------ttaaattt i macFas5.chr3 C 0 I 1 s chlSab2.chr2 15033033 9 - 90373283 ------------AGTACACTT i chlSab2.chr2 I 5 C 0 s colAng1.NW_012120598v1 216568 8 - 13750039 ------------AGTGCACT- i colAng1.NW_012120598v1 I 5 C 0 s calJac3.chr21 21934104 9 + 50472720 ------------AGCACACTT i calJac3.chr21 I 5 C 0 s saiBol1.JH378168 5037520 9 + 13128814 ------------AGCACACTT i saiBol1.JH378168 I 5 C 0 s cebCap1.NW_016107322v1 9612693 9 - 14377064 ------------AGCACACTT i cebCap1.NW_016107322v1 I 5 C 0 s aotNan1.NW_018487195v1 8750464 9 + 9889416 ------------AGCACACTT i aotNan1.NW_018487195v1 I 5 C 0 s otoGar3.GL873528 20759817 9 - 38779656 ------------AGAACACTT i otoGar3.GL873528 I 5 C 0 s canFam3.chr31 13834955 21 + 39895921 AAAAAAAAAAACAAAACACTT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19208011 579 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I e cerAty1.NW_012002954v1 8458162 9 + 21915920 I e macNem1.NW_012019910v1 8728799 9 + 9440265 I e manLeu1.NW_012102865v1 2212419 9 + 4234846 I e rheMac8.chr3 155423217 9 - 185818997 I a score=1012918.000000 s hg38.chr21_KI270874v1_alt 94906 96 + 166743 TGGTACCAAAGTGTACCAAATATTTATATTAAATAATTTTCTGTTGGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA s panTro5.chr21 3720182 96 + 33445071 TGGTACCAAAGTGTACCAAATATTTATATTAAATAATTTTCTGTTGGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346006 96 + 46275980 TGGTACCAAAGTGTACCAAATATTTATATTAAATAATTTTCTGTTGGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285357 96 - 13858734 TGGTACCAAAGTGTACCAAATATTTATATTAAATAATTTTCTGTTGGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468413 96 + 32716333 TGGTACCAAAGTGTACCAAATATTTATATTAAATAATTTTCTGTTGGTAACATTCAAATTTCTCACTGTCAGCCAAACTTCAGCAGAAATGTCAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423226 96 - 185818997 taatataaatataaaccaaatatttatattaaataattttctatttgtaacattcaaatttCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i rheMac8.chr3 I 9 C 0 s macFas5.chr3 162247794 96 - 192294377 taatataaatataaaccaaatatttatattaaataattttctatttgtaacattcaaatttCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 8728808 96 + 9440265 taatataaatataaaccaaatatttatattaaataattttctatttgtaacattcaaatttCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i macNem1.NW_012019910v1 I 9 C 0 s cerAty1.NW_012002954v1 8458171 96 + 21915920 taatataaatataaaccaaatatttatattaaataattttctatttgtaacattcaaatttCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i cerAty1.NW_012002954v1 I 9 C 0 s chlSab2.chr2 15033042 96 - 90373283 TGGTAGCAAAGTGTACCAAATATTTATATTAAATAATTTTCTATTTGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATGTCAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212428 96 + 4234846 taatataaatataaaccaaatatttatattaaataattttctatttgtaacattcaaatttCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i manLeu1.NW_012102865v1 I 9 C 0 s colAng1.NW_012120598v1 216576 96 - 13750039 TTGTAACAAAGTGTACCAAATATTTATATTAAATAATTTTCTATTTGTAACATTCAAATTTCTCACTGACAGCAAAACTTCAGCAGAAATTTCAGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934113 96 + 50472720 TGGTACCAAAGTGTTCCaaatatttatattaaataattttCTGTTTGTAACATTCAAATTTCTCACTGTCAGCCAAACTTCAGCAGAAATTTCAGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037529 96 + 13128814 TGGTACCAAAGTGTTCCaaatatttatattaaataattttCTGTTTGTAACATTCAAATTTCTCACTGTCAGCAAAACTTCAGCAGAAATTTCAGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9612702 96 - 14377064 TGGTACCAAAGTGTTCCAGATATTTATATTAAATAATTTTTCGTTTGTAACATTCAAATTTCTCACTGCCAGCAATACTTCAGCAGAAATTTCAGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750473 78 + 9889416 TGGTACCAAAGTGTTCCAAATATTTATATTAAATAATTTTCTGTTTATAACATTCAAATTTCTCACTGTCAG------------------TTCAGA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20759826 80 - 38779656 TGGTACTAAGA------------TTTTGTCAAATAATT----ACTCGTAACATTCCAATTTCTCAATGTCAGCAAGACTTCATCAGAAAATTCAGA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13834976 82 + 39895921 TGGTACTGAGAT----------TTTATGTCAATTACTT----GTTTTTAATATTGAAATTTCTTACTGTCAGCAAACTTGTATCAAAAATTTCAGA i canFam3.chr31 C 0 I 168 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19208011 579 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=215181.000000 s hg38.chr21_KI270874v1_alt 95002 22 + 166743 TCATG----------------------------------------------------ATGGTTGATGTGACTTG s panTro5.chr21 3720278 22 + 33445071 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346102 22 + 46275980 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285453 22 - 13858734 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468509 22 + 32716333 TCATG----------------------------------------------------ACGGTTGATGTGACTTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423322 22 - 185818997 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162247890 22 - 192294377 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728904 22 + 9440265 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458267 22 + 21915920 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033138 22 - 90373283 TCATG----------------------------------------------------AAGGCTGATGTGACTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212524 22 + 4234846 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216672 22 - 13750039 TCATG----------------------------------------------------ATGGTTGATGTGACTTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934209 22 + 50472720 TCATG----------------------------------------------------ATGGCTGCTGTGACCTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037625 22 + 13128814 TCATG----------------------------------------------------GTGGCTGCTGTGACTTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9612798 22 - 14377064 TCATG----------------------------------------------------ATGGCTGCTGTGACTTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750551 22 + 9889416 TCACG----------------------------------------------------ATGGCTGTTGTGACTTG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20759906 22 - 38779656 ATGTG----------------------------------------------------ATGATGGTTGGGGCTGA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13835226 74 + 39895921 tcatgaataaataaataaataaataaataaataaataaataaataaatCAGAATTTCATGGTTTATATGGCTTC i canFam3.chr31 I 168 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19208011 579 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=2573988.000000 s hg38.chr21_KI270874v1_alt 95024 213 + 166743 GTGCCCAAAAGTAACTGTGCTTAAGTTACATAAATAACTAAAGCCTGTCACAGATGTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCCATGATCTATTTTATCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTGTGTTTATAGGTGCAGTCTAGTGGGCATGCTGAGTATCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTAAGTCATTTA s panTro5.chr21 3720300 213 + 33445071 GTGCCCAAAAGTAACTGTGCTTAAGTTACATAAATAACTAAAGCCTGTCACAGATGTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCCATGATCTATTTTATCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTGTGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTATCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTAAGTCATTTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346124 213 + 46275980 GTGCCCAAAAGTAACTGTGCTTAAGTTACATAAATAACTAAAGCCTGTCACAGATGTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCCATGATCTATTTTATCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTGTGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTATCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTAAGTCATTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285475 213 - 13858734 GTGCCCAAAAGTAACTGTGCTTAAGTTACATAAATAACTAAAGCCTGTCACAGATGTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCCATGATCTATTTTATCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTGTGTTTATAGGCATAGTCTAGTGGTCATGCTGAGTATCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTAAGTCATTTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468531 214 + 32716333 GTGCCCAAAAGTAACTGTGCTTAAGTTACATAAATAGCTAAAGTCTGTCACAGATTTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCCATGATCTAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTGTGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTATCTATTTTTTCTAAACACACTATGTTGCATGTTGATTAAATCATTTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423344 213 - 185818997 GTGCCCCAAAGTAACTGTGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGATTTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162247912 213 - 192294377 GTGCCCCAAAGTAACTGTGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGATTTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8728926 213 + 9440265 GTGCCCCAAAGTAACTGTGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGATTTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGCGTAGTCTAGTGGGCATGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458289 213 + 21915920 GTGCCCCAAAGTAACTGTGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGATTTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGTGTAGTCTAGTGGGCACGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033160 213 - 90373283 GTGCCCCAAAGTAACTGTGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGATTTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCGGAGACATGTTATGTTTATAGGCGTAGTTTAGTGGGCACGCTGAGTACCTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212546 213 + 4234846 GTGCCCCAAAGTAACTATGTTTAAGTTACATAAATAACTAAAGTCTGTCACAGATTTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCTGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGCGTAGTCTAGTGGGCACGCTGAGTACCTA-TTTTTCTAAACACCCTATGTTGCATCCTGATTGAGTCATTTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216694 210 - 13750039 GTGCCCCTAAGTAACTGTGTTTAAGTTACATAAATAACTGAAGTCTGTCACAGATTTTTTT--ATCTA-----------------------------------------------------------------------CTAGCCCGTGATCAAATTTTTCTTTGAACTTAAGGAGTCCAAAAAGATTTGTCCAGAGACATGTTATGTTTATAGGCGTAGTCTAGTGGGCACGCC---TTTTTA-TTTTTCTAAACACACTATGTTGCATCCTGATTGAGTCATTTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934231 215 + 50472720 GTGCCCAAAAGTAACTGTGTTTAAGATATCTAAATGACTAAAGTCTGTGACAGACTATTTTTAATCTA-----------------------------------------------------------------------CTAACCCATGATCTAATTTTTCTTTGAACTTAAAGAGTCCAAAAATATTTGTCCagagacatgttatgtttataggagtagtctagtgggcatgctaggtatctg-tttttctaaacacactatattgtatcttgattaagtcaTTTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037647 213 + 13128814 GTGCCCAAAAGTAACTGTGTTTAAGATATATAAATGACTAAAGTC--TGACAGATTTTTTTTAATCTA-----------------------------------------------------------------------CTAACCCATGATCTAATTTTTCTTTGAACTTAAGGACTCCAAAAATATTTGTCCAGAGACATGTTACATTTATAGGAGTAATCTAGTGGGCATGCTAGGTATCTG-TTTTTCTAAACACACTATGTTGTATCTTGATTAAGTCATTTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9612820 215 - 14377064 GTGCCCAAAAGTAACTGTGTTTAAGATATATAAATGACTAAAGTCTGTGACAGATTTTTTTTAATCTA-----------------------------------------------------------------------CTAACCCATGATCTAATTTTTCTTTGAACTTAAGGAGTCCAAAAATGTTTGTCCAGAGACATGTTACATTTATAGGAGTAGTCTAGTGGGCATGCTAAGTATCTA-TTTTTCTAAACACACTATGTTGTATCTTGATTAAGTCATTTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750573 215 + 9889416 GTGCCCAAAAGTAACTGTGTTTAAGATATATAAATGACTAAAGTCTGTGACAGACTTTTTTTAATCTA-----------------------------------------------------------------------CTAACCCATGATCTAATTTTTCTTTGAACTTAAGGAGTCCAAAAATATTTGTCCAGAGACATGTTACGTTTATAGGAGTAGTCTAGTGGGCATGCTAAGTATCTA-TTTTTCTAAACACACTATGTTGTATCTTGATTAACTCATTTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19208590 213 + 47401472 GTGCCCAAAAGAAACTGTGCTTAAGATATTTAAATGACTAAAGACTATGCCAGAGATTTTTTGATCTA-----------------------------------------------------------------------TTGGCCCATAATCTAA-TTTTCTTTGAACTTAAGCAGTCAAAAGATATTAGTCCAGAGAAATAGTATATTTATAGGG-CAGTCAACTGGTCATGCTAGGTACCTA-TTTTTCTAAACATGCTATGTTGTGCCTTGATTAAGTCATTTA i micMur3.chr31 I 579 I 73 s otoGar3.GL873528 20759928 201 - 38779656 GTGCCCCAAAGGCACTGTGCTTAAGTTACACAAATAACTAAAGTCTGTGCTGGAGATTTCTTGATCTA------------------------------------------------------------------------TGGCCCATGATCTAATTTTTCTTTGAACTGAAGCAGTTGAAAAATATTAGTCCAGAGAGATATTATATTTACAGGG---------TGGCCATGCTATACATCCA-TTTTTCTAAA----CTATATTACACCTTGCTTAAGTCCTTTA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13835300 275 + 39895921 AAGCCCAAAAGAAATTATACTTCACTTATATAAATGATTAAAGTCTATGACAGATGACTAC--AGCTAAGAAGATCACAAAATGAAGTAGCAGTATTAATCATACAATAAATGGAATCATTTGGTCTCATTTATTTGACCTAGACCATGATCTAATTTTTCTTTGAACTTAAGGAGTT---AATTGTTTGTGCAGAGAGATAGTGTGTTGGTAGGGATAGTCTAATGGGTATGCAGGGTATCTA-TTTCTGTAAATTTACTGTGTT------TGATTAAGTCCTTTA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78133649 315 + 98207768 I a score=830130.000000 s hg38.chr21_KI270874v1_alt 95237 76 + 166743 TATGCAAATGTTACACTGAATGAGATACCTGGTTTTTAAGGCTTCTCCATTGTGCATAACGCCTCCATCATAAACG s panTro5.chr21 3720513 76 + 33445071 TATGCAAATGTTACACTGAATGAGATACCTGGTTTTTAAGGCTTCTCCATTGTGCATAACGCCTCCATCATAAACG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346337 76 + 46275980 TATGCAAATGTTACACTGAATGAGATACCTGGTTTTTAAGGCTTCTCCATTGTGCATAACGCCTCCATCATAAACG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285688 76 - 13858734 TATGCAAATGTTACACTGAATGAGATACCTGGTTTTTAAGGCTTCTCCATTGTGCATAACGCCTCCATCATAAACG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468745 76 + 32716333 TATGCAAATGTTACACTGAATGAGATACCTGGTTTTTAAGCTTTCTCCATTGTGCATAACGCCTCCATCATAAACG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423557 76 - 185818997 TATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCGTGACGCCTCCATTATAAACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162248125 76 - 192294377 TATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCGTGACGCCTCCATTATAAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8729139 76 + 9440265 TATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCGTGACGCCTCCATTATAAACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458502 76 + 21915920 TATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCGTGACGCCTCCATTATAAACG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033373 76 - 90373283 TATGCAAATATTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCATGACGCCTCCATTATAAGCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212759 76 + 4234846 TATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGACTTCTCCATTGTGCGTGACGCCTTCATTATAAACG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216904 76 - 13750039 TATGCAAATGTTATACTGAATGAGATACCTGGTTTTTAAGGCTTCTAAGTTGTGCGTGATGCCTCCATTATAAGCG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934446 76 + 50472720 TATGCAAATATTATACTGAATTGGATACCTGGTCTTGAAGGCTTCTCCATTGTGCATGACGCCTCCATCATAAACG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037860 76 + 13128814 TATGCAAATGTTATACTGAATGGGATACCTGGTCTTGAAGGCTTCTCCGTTGTGCATGACGCCTCCATCATAAACG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9613035 76 - 14377064 CATGCAAATGTTATACTGAATGGGATACCTGGTCTTAAAGGCGTCTCCATTGTGCATGATGCCTCCATCATAAACA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750788 76 + 9889416 TATGCAAATGTTATACTGAATGGGATACCTGGTCTTGAAGGCTTCTCCACTGTGCGTGACGCCTCCATCATAAACT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20760129 76 - 38779656 TATGTAATTGTTATACTGATTGGGCTCCCTGGTCCTGAAGATGTCTCCTTTCCTGGTCCTTCCCCCAATAAGAATT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13835575 74 + 39895921 TGCACAACTGTTAG--TAAATGGGATGCCTTGTCTATAAGACTTCTATTTTCTGGGTTTTGACCCCATTGTAAATT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19208803 73 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=854790.000000 s hg38.chr21_KI270874v1_alt 95313 76 + 166743 TTGCTCACATGTT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCGATTGACAGAAAT------ATACCAGTGATTGC s panTro5.chr21 3720589 76 + 33445071 TTGCTCATATGTT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCGATTGACAGAAAT------ATACCAGTGATTGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346413 76 + 46275980 TTGCTCATATGTT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCGATTGACAGAAAT------ATACCAGTGATTGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285764 76 - 13858734 TTGCTCATATGTT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCGATTGACAGAAAT------ATACCAGTGGTTGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468821 76 + 32716333 TTGCTCATATGTT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAAT------ATACCACTAATTGC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423633 76 - 185818997 TTGCTCATATGTT-TAGATATGTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAAT------GTACCAGTGATTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162248201 76 - 192294377 TTGCTCATATGTT-TAGATATGTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAAT------GTACCAGTGATTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8729215 76 + 9440265 TTGCTCATATGTT-TAGATATGTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAAT------GTACCAGTGATTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458578 76 + 21915920 TTGCTCATATGTT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAAT------GTACCAGTGATTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033449 76 - 90373283 TTGCTCATATGTT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAAT------ATACCAGTGATTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212835 76 + 4234846 TTGCTCATATGTT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCAGTTGACAGAAAC------GTACCAGTGATTGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 216980 76 - 13750039 TTGCTCATATATT-TAGATATTTATTCCTCACTGAGATATTTTTATCATCAATTGACAGAAAT------ATACCAGTGATTGC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934522 76 + 50472720 TTGCAAATATGTT-TAAACACTTGTTCTCCACTGAGATATTTTTATCATCAATTGACAGAAAT------ACACCAGTGATTGC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5037936 74 + 13128814 TTGCAA--ATGTT-TAAATACTTATTCTCCGCTGAGATATTTTTATCTTCAATTGACAGAAAT------ATACCAGTGATTGC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9613111 76 - 14377064 TTGCAAATATGTT-TAAATACTTATTCTCCACTGAGATATTTTTATCATCAATTGACAGAAAT------ATACCAGTGATTGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750864 79 + 9889416 TTGCAAATATGTT-TAAATACTTATTCTCCACTGGGATATTTTTA---TCAATTGACAGAAATTGATAAAAACCAGTGATTGC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19208876 76 + 47401472 TTGCACACATATT-TAAATACTTAGTCTCCACTGAGATAGTTTCACCATCAATTGACAGAAAT------ATATTAATGATTGC i micMur3.chr31 I 73 I 32 s otoGar3.GL873528 20760205 77 - 38779656 TTGCACACGTGTTATAAATATTTAGGCTCCACTGAGATAATTTCACCATCAATTGACAAAAGT------ATATCAGTGACTGT i otoGar3.GL873528 C 0 I 8 s canFam3.chr31 13835649 25 + 39895921 TTGCACATATGTT-TGAATACTTAGC--------------------------------------------------------- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78133649 315 + 98207768 I a score=301718.000000 s hg38.chr21_KI270874v1_alt 95389 27 + 166743 TCAGTACTATATACTATGCCAATTTTC s panTro5.chr21 3720665 27 + 33445071 TCAGTACTATATACTATGCCAATTTTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346489 27 + 46275980 TCAGTACTATATACTATGCCAATTTTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285840 27 - 13858734 TCAGTACTATATACTATGCCAGTTTTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468897 27 + 32716333 TCAGTACTATATACTATGCCAGTTTTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423709 27 - 185818997 TCAGTACTATGTACTATGCCAGTTTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162248277 27 - 192294377 TCAGTACTATGTACTATGCCAGTTTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8729291 27 + 9440265 TCAGTACTATGTACTATGCCAGTTTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458654 27 + 21915920 TCAGTACTATGTACTATGCCAGTTTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033525 27 - 90373283 TCAGTACTATGTACGATGCCAGTTTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212911 27 + 4234846 TCAGTACTATGTACTATGCCAGTTTTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 217056 26 - 13750039 TCAGTACTATGTACTATGCCAG-TTTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934598 27 + 50472720 TCAGTGCTATTCACTATGCCAGTTTTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5038010 27 + 13128814 TCAGTACTATGTACTATGCCAGTTTTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9613187 27 - 14377064 TCAGTACTATGTACTACGCCAGTTTTC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8750943 27 + 9889416 TCAGTACTATGTACCATGCCAGTTTTC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20760290 24 - 38779656 TCAGTG---TGAACTATGTCAGCCTTT i otoGar3.GL873528 I 8 C 0 s canFam3.chr31 13835674 19 + 39895921 --------ATGAACTATGCCAGCCTTC i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19208952 32 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=1117970.000000 s hg38.chr21_KI270874v1_alt 95416 95 + 166743 AAATAGTCT----AATGGGA--TAGAGCCTTCATGTCATTAAAGCACAAGTTTAC---AGAAACATAACTGCCCC-GGGATTAGAAGATAATTT-----TAGTAGTCTTT s panTro5.chr21 3720692 95 + 33445071 AAATAGTCT----AATGGGA--TAGAGCCTTCATGTCATTAAAGCACAAGTTTAC---AGAAACATAACCGCCCC-AGGATTAGAAGATAATTT-----TAGTAGTCTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346516 95 + 46275980 AAATAGTCT----AATGGGA--TAGAGCCTTCATGTCATTAAAGCACAAGTTTAC---AGAAACATAACCGCCCC-GGGATTAGAAGATAATTT-----TAGTAGTCTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285867 95 - 13858734 AAATAGTCT----AATGGGA--TAGAGCCTTCATGTCATTAAAGCACAAGTTTAC---AGAAACATAACCGCCCC-GGGATTAGAAGATAATTT-----TAGTAGTCTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4468924 96 + 32716333 GAATAGTCT----AATGGGA--TACAGCCTTCGTGTCATTAAAGCACAAGTTTAC---AGAAACATAACCGCCCCTGGGATTAGAAGATAATTT-----TAGCAGTCTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423736 96 - 185818997 AAATAGTCT----AATGGGA--TAGAGCCTTCAGGTCATTAAAGCACAAGCTTAC---AGAAACATAACTGCCCCTGGGATTAAAAGGTAATTT-----TAGTAGTCTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162248304 96 - 192294377 AAATAGTCT----AATGGGA--TAGAGCCTTCAGGTCATTAAAGCACAAGCTTAC---AGAAACATAACTGCCCCTGGGATTAAAAGATAATTT-----TAGTAGTCTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8729318 96 + 9440265 AAATAGTCT----AATGGGA--TAGAGCCTTCAGGTCATTAAAGCACAAGCTTAC---AGAAACATAACTGCCCCTGGGATTAAAAGATAATTT-----TAGTAGTCTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458681 96 + 21915920 AAATAGTCT----AATGGGA--TAGAGCCTTCAGGTCATTAAAGCACAAGCTTAC---AGAAACATAACTGCCCCTGGGATTAAAAGATAATTT-----TAGTAGTCTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033552 96 - 90373283 AAATAGTCT----CATGGGA--TAGGGCCTTCAGGTCATTAAAGCACTAGCTTAC---AGAAACATAACTGCCCCTGGGATTAGAAGATAATTT-----TAGTAGTCTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2212938 100 + 4234846 AAATAGTCTAATGAATGGGA--TAGAGCCTTCAGGTCATTAAAGCACAAGCTTAC---AGAAACATAACTGCCCCTGGGATTAAAAGATAATTT-----TAGTAGTCTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 217082 96 - 13750039 AAATAGTCT----CATGGGA--TAGAGCCTTCAGGTCATTAAAGCACAAGTTTAC---AGAAACATAACCGCCCCTGGCATTAGAAGATAATTT-----TAGTAGTCTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934625 95 + 50472720 AAATAGTCT----AATGGGA--TAAGGTCTTGAGGTTATTAAAGTACAAGATAGC---AGAAACATAACTGCCTCCAGGAATAGAAGAT-ATTT-----TAGTAATCTTT i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5038037 95 + 13128814 AAATAGTCT----AATGGGA--TAAGGTCTTGAGGTTATTAAAGTACAAGATTGC---AGAAACATAATTGCCCCCAGGAATAGAAAAT-ATTT-----TAGCAATCTTT i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9613214 95 - 14377064 AAATAGTCC----AATGGGA--TAAGGTCTTGAGGTTATTAAAGTGCAAGATTGC---AGAAATATAACTGCCCCCAGGAATAGAAGAT-ATTT-----TAGCAATCTTT i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8750970 95 + 9889416 AAATGGTCT----AATGGGA--TAAGGTCTTGAGGTTATTAACGTACAAGATTGC---AGAAACATAACTGCTCCCAGGAATAGAAGAT-CTTT-----TAGTAATCTTT i aotNan1.NW_018487195v1 C 0 I 1 s micMur3.chr31 19208984 96 + 47401472 AAATAGTTT----AATGGGA--TAGGGCCTTCAGGTCATGAAAGTGCAAATTTGC---AGAAACATAACTGCTCCTGTGATTTGAAGAGAATTT-----TAGTAATCttt i micMur3.chr31 I 32 I 739 s otoGar3.GL873528 20760314 101 - 38779656 AAATAGTTT----AATGGGA--TAGGGCCTTTAGGTCAGAAAAGTACAAATTTGC---TGAAACATAACTGCCCCTGTGATCGGAAGAAGATTTCACTATAGTAATCCTT i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 13835693 101 + 39895921 AAGTACTGT----AATGGGAAGAAAGAGCCTCAGGTCATGACAGTGCGAATTTGCAGAAGAAACATAGCTTCCCCTGTGATTAGAAGACAATTT-----TAGTAATTGTT i canFam3.chr31 C 0 I 1 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78133649 315 + 98207768 I a score=584791.000000 s hg38.chr21_KI270874v1_alt 95511 52 + 166743 GGG-AATTTCATCCTTAACATTTAGGTTGGGGAAAGGGATTCCAGACACAAAG s panTro5.chr21 3720787 52 + 33445071 GGG-AATTTCATCCTTAACATTTAGGTTGGGGAAAGGGATTCAAGACACAAAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346611 52 + 46275980 GGG-AATTTCATCCTTAACATTTAGGTTGGGGAAAGGGATTCAAGACACAAAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3285962 52 - 13858734 GGG-AATTTCATCCTTAACATTTAGATTGGGGAAAGGGGTTCAAGACACAAAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4469020 52 + 32716333 GGG-AATTTCATCCTTAACATTTATGTTGGGGAAAGGGGTTCAAGACACAAAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423832 51 - 185818997 GGG-AGTTGCATCCTTAACATTTAGGTTGGGGAAAGGGGTTCAAGACA-AAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162248400 51 - 192294377 GGG-AGTTGCATCCTTAACATTTAGGTTGGGGAAAGGGGTTCAAGACA-AAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8729414 51 + 9440265 GGG-AGTTGCATCCTTAACATTTAGGTTGGGGAAAGGGGTTCAAGACA-AAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458777 51 + 21915920 GGG-AGTTGCATCCTTAACATTTAGGTTGGGGAAAGGGGTTCAAGACA-AAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033648 52 - 90373283 GGG-AGTGTCATCCTTAACATTTAGGTTGGGGAAGGGGGTTCAAGACACAAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2213038 51 + 4234846 GGG-AGTTGCATCCTTAACATTTAGGTTGGGGAAAGGGGTTCAAGACA-AAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 217178 51 - 13750039 GGG-AATTTCATCCTTAACATTTAGGTTGGGGAAAGGGGTTGAAGACA-AAAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934721 52 + 50472720 GGG-AATTTCATCCTTAAAATTTAGGTTGGGGAAAAGGGTTCAAGACACAAAG i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5038133 53 + 13128814 GGGAAATTTCATCCTTAAAATTTAGGTTGGGGAAAGGGGTTCAAGACACAAAG i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9613310 52 - 14377064 AGG-AATTTCATCCTTAAAATTTAGGTTGGGGAAAGGGGTTCAACACACAAAG i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8751066 52 + 9889416 GGG-AATTTCATCCTTAAAATTTAGGCTGGGGAAAGGAGTTCAAGACACAAAG i aotNan1.NW_018487195v1 I 1 C 0 s otoGar3.GL873528 20760416 52 - 38779656 GGG-AATTTCACCGACAACACCCAGGTTAAGGAAAGAAGTTTGAGATACAAAG i otoGar3.GL873528 I 1 I 42 s canFam3.chr31 13835795 52 + 39895921 GGG-AATTTCACCCTTAACATCCAGGTTGAGGAAAGGGGTGCAAGATGCAAAG i canFam3.chr31 I 1 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209080 739 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=554936.000000 s hg38.chr21_KI270874v1_alt 95563 53 + 166743 T----------------------------------------------------CTGTCCCCTACCTTGAGAACAAAGTCTGAGAGTGTTATCCTGTGCACTCTAA s panTro5.chr21 3720839 53 + 33445071 T----------------------------------------------------CTGTCCCCTACCTTGAGAACAATGCCTGAGAGTGTTATCCTGTGCACTCTAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346663 53 + 46275980 T----------------------------------------------------CTGTCCCCTACCTTGAGAACAATGCCTGAGAGTGTTATCCTGTGCACTCTAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3286014 53 - 13858734 T----------------------------------------------------CTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4469072 53 + 32716333 T----------------------------------------------------CTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCCCTCGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423883 53 - 185818997 T----------------------------------------------------CTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162248451 53 - 192294377 T----------------------------------------------------CTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8729465 53 + 9440265 T----------------------------------------------------CTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458828 53 + 21915920 T----------------------------------------------------CTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033700 53 - 90373283 T----------------------------------------------------CTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2213089 53 + 4234846 T----------------------------------------------------CTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 217229 53 - 13750039 T----------------------------------------------------CTGCTCCCTACCTTGAGAACAAAGGCTGAGAGTGTTATCCTGTGCACTCTAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934773 92 + 50472720 TCTGAAACTTAACTT----------TCCAGCTGTTGCCATC---GGAAGTTTTCTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTTTTATCCTGTGTACTCTAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5038186 90 + 13128814 TCTGAAACTTAACTC----------TCCAGACGTTGCCATC---GGAAGTTTTCTGCCCCCTACCTTGAGAACAAAGGCT--GAGTTTTATCCTGTGCGTGCTAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9613362 92 - 14377064 TCTGAAACTTAACTT----------TCCAGATGTTAACATC---AGAAGTTTCCTGCCCTCTACCTTGAGAACAAAGGCTGAGAGTTTTATCCTGTGCACTCTAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8751118 92 + 9889416 TCTGAAACTTAACTT----------TCCAGATGTTGTCATC---AGAAGTTTTCTGCCCCCTACCTTGAGAACAAAGGCTGAGAGTTTTATCCTGTGCACTCTAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19209819 53 + 47401472 T----------------------------------------------------CTGCCCCCTGCCTTGAGAACAAAGACTGAGAATATTTTCCTATGCATTCTAA i micMur3.chr31 I 739 I 1266 s otoGar3.GL873528 20760510 47 - 38779656 T----------------------------------------------------TGGCCTCCTGCCTTGAGAAC----ACTGAG--TATTTTCTTGTGCATTCTCA i otoGar3.GL873528 I 42 C 0 s canFam3.chr31 13835847 103 + 39895921 -TTTAGATCTTAATTAGATGCAAAGTCCAGGTGTTCCCTTCAATAGGAGGTTCCTG-CCCCTACCTTGAGAATAATGGCTGAGAGTGTTGTTCTGGGCACTCTAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78133649 315 + 98207768 I a score=4901670.000000 s hg38.chr21_KI270874v1_alt 95616 442 + 166743 CGTTTTGCACAAAAATGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccaccccc-aagtacctttcttgaccaatgca--------tcagcttttggg-----------------agtattggctgctaatagctcacagctaagtgtttctcctggcatgtggaaaccatctaacccaaagttatgctccgccctaggggca-----gtttatatccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagatcc--ataaactccagagcttctttgttgcaatcacaaggcattttcaacctc----tccctctgcctcatcctgcttctttcaatcctttctaatctaatt-------------tctgagagcattcatccataaaatttctgcaagcaaatctccacctc s panTro5.chr21 3720892 442 + 33445071 TGTTTTGCACAAAAATGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtaggtctgaggtatgccacccac-aagtacctttcttgaccagtgca--------tcagcttttggg-----------------agtattggctgctaatagctcacagctaagtgtttctcctggcatgtggaaaccatctaactcaacgttatgctccgccctaggggca-----gtttacatccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagatcc--ataaactccagagcttctttgttgcaatcacaaggcattttcaacctc----tccctctgcctcatcctgcttctttcaatcctttctaatctaatt-------------tctgagagcattcacctataaaatttctgcaagcaaatctccacctc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17346716 442 + 46275980 TGTTTTGCACAAAAATGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacctttcttgaccagtgca--------tcagcttttggg-----------------agtattggttgctaatagctcacagctaagtgtttctcctggcatgtggaaaccatctaactcaacgttatgctccgccctaggggca-----gtttacatccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagatcc--ataaattccagagcttctttgttgcaatcacaaggcattttcaacctc----tccctctgcctcatcctgcttctttcaatcctttctaatctaact-------------tctgagagcattcacctataaaatttctgcaagcaaatctccacctc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3286067 444 - 13858734 CGTTTTGCACAAAAATGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtaccattcttgaccaatgca--------tcagcttttggg-----------------agtattggctgctaatagctcacagctaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctccgccctaggggca-----gtttacatccagtggctggttaactggcaaggtga-------------aaagatgagagtaagaaaaccaatc--ctttatgttttaatttggcacaaatctgaagatccatataaactccagagcttctttgttgcaatcacaacgcattttcaacctc----tccctctgcctcatcctgcttctttcaatcctttctaatctaatt-------------tctgagagcattcacccataaaatttctgcaagcaaatctccacctc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4469125 444 + 32716333 CGTTTTGGACAAAAATGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgctacccac-aagtacccttcttgaccaatgca--------tcagcttttggg-----------------agtattggctgctaatagctcacagctaagtgtatctcctggcatgtggaaaccatctaacccagtgttatgctctgccctagaagca-----gtttacatccagtgactggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagagccatataaactccagagcttctttgttgcaatcacaaggcattttcaaactc----tccttctgcctcatcctgcttctttcaatcctttctaatctaatt-------------tctgagagcattcaccaataaaatttctgcaagcaaaattccacctc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155423936 444 - 185818997 CGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacccttctcgaccaatgca--------tcagcttttggg-----------------agtattggctgctaatagctcgcagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgtcccaggggca-----gtttatatccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttctaatttggtacaaatctgaagagacatataaactccagagcttctttattgcaatcacaaggcattttcaaccac----tccctctgcctcatcctgcttctttcaatcctttctaatcgaatt-------------tctgagagcattcaccaataaaatttctgcaggtaaatctccacctc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162248504 444 - 192294377 CGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacccttctcgaccaatgca--------tcagcttttggg-----------------agtattggctgctaatagctcgcagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgtcccaggggca-----gtttacttccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttctaatttggtacaaatctgaagagacatataaactccagagcttctttattgcaatcacaaggcattttcaaccac----tccctctgcctcatcctgcttctttcaatcctttctaatcgaatt-------------tctgagagcattcaccaataaaatttctgcaggtaaatctccacctc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8729518 444 + 9440265 CGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacccttctcgaccaatgca--------tcagcttttggg-----------------agtattggctgctaatagctcgcagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgtcccaggggca-----gtttacatccagtagctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttctaatttggtacaaatctgaagagacatataaactccagagcttctttattgcaatcacaaggcattttcaaccac----tccctctgcctcatcctgcttctttcaatcctttctaatcgaatt-------------tctgagagcattcaccaataaaatttctgcaggtaaatctccacctc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8458881 444 + 21915920 CGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacccttctcgaccaatgca--------tcagcttttggg-----------------agtattggctgctaatagctcgcagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgccccaggggca-----gtttacatccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagagacatataaactgcagagcttcttcgttgcaatcacaaggcattttcaaccac----tccctctgcctcatcctgcttctttcaatcctttctaatcgaatt-------------tctgagagcattcaccaataaaatttctgcaagtaaatctccacctc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15033753 444 - 90373283 CGTTTTGCACAAAAGTGTGTTACATTGAGGCAGATCACTCCAAGCCTGGGATCTAACGGAGTCGGTctgaggtatgccgctcac-aagtacccttctcgactaatgca--------tcagcttttggg-----------------actatcagctgctaatagctcgcagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgccccaggggca-----gtttacatccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttgtgttttaatttgggacaaatctgaagagacatataaactccagagtttcttcgtttcaatcacaaggcactttcaacctc----tccctctgcctcatcctgcttcattcaatcctttctaatcttatt-------------tctgagagcattcaccaataaaatttctgcaagcaaatctccacctc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2213142 444 + 4234846 CGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacccttctcgaccaatgca--------tcagcttttggg-----------------agtattggctgctaatagctcacagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgccccaggggca-----gtttacatccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagagacatataaactccagagcttcttcgttgcaatcacaaggcattttcaaccac----tccctctgcctcatcctgcttctttcaatcctttctaatcgaatt-------------tctgagagcattcaccaataaaatttctgcaagtaaatctccacctc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 217282 444 - 13750039 CGTTTTGCACAAAAGTGTGTTACATTGAAGCAGATCACTCCAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccac-aagtacccttcttgaccaatgca--------tcagcttttggg-----------------agtattgcctgctaatagctcacagttaagtgtttctcctggcatgtggaaaccatctaacccaatgttatgctctgccctaggggca-----gtttacacccagtggctggttaactggcaaggtgg-------------aaagatgagagtaagaaaaccaatc--ctttatgttttaatttgggacaaatctgaagagccatataaactccagagctgcttcattgcaatcacaaggcattttcaacctc----tccctctgcctcatcctgcttctttcaatcctttctaatcgaatt-------------tctgagagcattcaccaataaaatttctgcaagcaaatctccacctc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21934865 430 + 50472720 TGTTTTGCACATAAATGTGTTGCATTGAAGCAGATTACCCAGAGCCTGGGATCTAAtggagtgggtctgagttatgccacccac-aagtaccctttttgactaatgca--------tcagcttgtggg-----------------agtattggc-----atagctcacagctaagtgtttctccaggcatgtgaaaaccatctaacccaatgtcatgctctgtcctaggggta-----gttcatatccagtggctggttaactggcagggtgg-------------aaagatgagagtaagaaaaccaatc--ccttatgttttaatttgggacaaatctgaaaagccatataaattccagagcttctttgttgcaatcacaaggcatttttcacctc----tccctctgcctcatcctgcttcttacaatcct---------aatt-------------cctgagatcagtcaccaatgaaatctctgcaagcaaatctccatctc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5038276 438 + 13128814 CATTTTGCACATAAATGTGTTACATTGAAGCAGATCACCTGAAGCCTGGGATCTAAtggagtgggtctgaggtataccatccac-aagtacccttcttgaccaatgta--------tcagcttgtggg-----------------actattgactgccaatagctcacagctaagtgtttctcctggcatgtgaaaaccatctaacccaatgtcatgctctgtcctaggggca------tttatatccagtggctggttaactggcagggtgg-------------aaagatgggagtaagaaaaccaatc--ccttatgttttaatttgggacaaatctgaaaagtcatataaattccagagcttctttgttgcaatcaaaaggcatttttcacctctccttccctctgcctcatcctgcttcttacaatcct---------aatt-------------cctgagagcagtcatcaatgaaatctctgcaagcaaatctccatctc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9613454 434 - 14377064 CATTTTGCACATAAATGTGTTACCTTGAAGCAGATCACCCGAAGCCTGAGATCTAAtggagcgggtctgaggtatgccacccac-aagtacccttcttgaccaatgca--------tcagcttgtggg-----------------agtattgactggcaatagctcatagctaagtgtttctcctggcatgtgaaaaccatctaacccaatgtcatgctctgtcctaggggca------tttttatccagtggctggttaactggcaggttgg-------------aaagatgggagtaagaaaaccaatc--ccttatgttttaatttgggacaaatctgaaaagccatataaattccagagcttctttgttgcaatcacaaggcattttccacctc----tccctctacctcatcctgcttcttacaatcct---------aatt-------------cctgagagcagtcaccaatgaaatctctgcaagcaaatctccatctc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8751210 435 + 9889416 CGTTTTGCACATAAATGTGTTACATTGAAGCAGATCACCCGAAGCCTGGGATCTAAtggagtgggtctgaggtatgccacccat-gagtacccttcttgaccaatgca--------tcagcttgtggg-----------------agtattggctgctaatagcttacagctaagtgtttctcctggcatgtgaaaaccatctaacccaatgtcatgctctgtcctaggggca-----gtttatattcagtggctggttaactggtagggtgg-------------aaagatgggagtaagaaaaccaatc--ccttatgttttaatttgggacaaatctgaaaagccatataaattccagagcttctttgttgcaatcacaaggcattttccacctc----tccctctgcctcatcctgcttcttacaatcct---------aatt-------------cctgagagcagtcaccagtgaaatctctgcaagcaaatctccatctc i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20760557 421 - 38779656 TGTTTTACATATTAGTGCTTTGCCT-------------------------AATTATTGTAGTGAATATGAAATATACTACTCAC-AAGCATCTTTCTGAACAAAGCCA--------CCAGCTTCCAGGACACCATGGGTGCTAAAAACCTGGGAGGCTAATAGCTCCCCACTGAGC-TCTCTCTTCCCCAGTA------AGCTAA---AAGATTATGCCCCACCCCTGGAGCA-----GTTTGCAATTAATGACTGATTAATTGGTAGGGTAGTGGTACCAGGTGTGGGGATATGGGTACAAGGGGCAGTC--CC-CATGTCTTAATTAAAGACAGTTAAGAAGAATCAAATAAACTCTAGAG----------------ACAGGCAATTttcaatctt----tctctcagcctaatcttgatactttccatcccttcaagcttaatt-------------tctaaaatcattcactaataaaattcctacatgcaaatctcaat-tc i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13835950 466 + 39895921 TGTTTTATGTAGAAGTGTTTTACATAGAAGCTTATCAGTCTATGCCTAGGATCTAATGGAGTAGATctggggtgtgccaaccacaaagcagccttctgagccaaggcactcacactccagcttccagg-----------------aatataggcaactaatagctcatagctaaaatcctctcctggaatctgggaaccacctaatccaagatttttcctctccccaggggcagtgcagtctacattcaatgactggttaactgggatgggag-------------aa----gggaataaaaggaccagtctgctccatgccttaattagggacaattctaaagagccatataaattccagaccttctctattgcaattacaagacagtgtcaatctc----tc---ctgcctgattctattcctttcaatgctttcaaatccacttcagcagtataggatttgagagcattcaccagtaaaattcccatatgcaaatctacatctc i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e mm10.chr16 78133649 315 + 98207768 I a score=5003078.000000 s hg38.chr21_KI270874v1_alt 96058 418 + 166743 aaattctgtttccaggaaTGGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagtatataaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--ataggtagagcatt---attagctccaggcatattagaacaatgaaattgttaagactttcacctgagatgaatgggatCGGAAAAGAAAGCATTGTCTGGGGACAGAATCTCAAGCATTTGAGAAATTTGGGGAAAATAATAATTATAAAAACTATGGAAGAAA----TGACTGTTGCTGAGGGCTGTCATTTCACTGGAGAAAGACAATGGAAAACTGGAGATAATTAATTACCAATTTAAAGT-AAGTGTGAAAACCACAGGGATTGTTTGGCAGCATATGAAGAATCTCTG s panTro5.chr21 3721334 418 + 33445071 aaattctgtttccaggaaTAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagtatataaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--ataggtagagcgtt---attagctccaggcatattagaacaatgaaattgttaagactttcacctgagatgaatgggatCGGAAAAGAAAGTATTGTCTGGGGACAGAATCTCAAGCATTTGAGAAATTTGGGGAAAATAATAATTATAAAAACTATGGAAGAAA----TGACTGTTGCTGAGGGCTGTCATTTCACTGGAGAAAGACAATGGAAAACTGGAGATAATTAATTACCAATTTAAAGT-AAGTGTAAAAACCACAGGGATTGTTTGGCAGCATATGAAGAATCTCTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347158 418 + 46275980 aaattctgtttccaggaaTAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagtatataaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--ataggtagagcgtt---attagctccaggcatattagaacaatgaaattgttaagactttctcctgagatgaatgggatCGGAAAAGAAAGTATTGTCTGGGGACAGAATCTCAAGCATTTGAGAAATTTGGGGAAAATAATAATTATAAAAACTATGGAAGAAA----TGACTGTTGCTGAGGGCTGTCATTTCACTGGAGAAAGACAATGGAAAACTGGAGATAATTAATTACCAATTTAAAGT-AAGTGTAAAAACCACAGGGATTGTTTGGCAGCATATGAAGAATCTCTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3286511 418 - 13858734 aaattctgtttccaggaaTAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagtatataaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--ataggtagagcgtt---attagctccaggcatattaggacaatgaaattgttaagactttcacctgagatgaatgggatcggaaaagaaagcgTTGTCTGGGGACAGAATCTCAAGCATTTGAGAAATTTGGGGAAAATAATAATTATAAAAACTATGGAAGAAA----TGACTGTTGCTGAGGGCTATAATTTCACTGGAGAAAGACAATGGAAAACTGGAGATAATTAATTACCAATTTAAAGT-AAGTGTGAAAACCACAGGGATTGTTTGGCAGCATATGAAGAATCTCTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4469569 418 + 32716333 aaattctgtttccaggaaTAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagaacctaaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--ataggtagagcgtt---attagctccaggcatattagaactatgaaattgttaagactttcacctgagatgaatgggatgggaaaagaaagcattgtctggggacagaatctcaagcatttgagaaatttgaggaaaataataattacaaaaactatggaagaaa----ttactgttgctgaaggctaccatttcactggagaaagacaatggaaaactggagataattaattaccaatttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155424380 418 - 185818997 aaattctgtttcTAGGAATAGTGACCTAAAGCAgttgaagccaagagtggtcctaagaagcagaatctaaaatggtattttacagctg---agtcatctgctgatggctagcagtaaggatcccatcactggtg--ataggcagaatgtt---attagctccaggcacattagaacaatgaaatcgttaagactgtcacctgagatgaatcagatgggaaaagaaagcactgtctggggacagaatctccagcatttgagaaatttggggaaaataataattataaaaactatggaagaaa----tgactgttgctgggggctatcatttcgctggagaaaagcaatggaaaactggagataattaattaccagtttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162248948 418 - 192294377 aaattctgtttctaggaatagtgacctaaagcagttgaagccaagagtggtcctaagaagcagaatctaaaatggtattttacagctg---agtcatctgctgatggctagcagtaaggatcccatcactggtg--ataggcagaatgtt---attagctccaggcacattagaacaatgaaatcgttaagactgtcacctgagatgaatcggatgggaaaagaaagcactgtctggggacagaatctccagcatttgagaaatttggggaaaataataattataaaaactatggaagaaa----tgactgttgctgggggctatcatttcgctggagaaaggcaatggaaaactggagataattaattaccagtttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8729962 418 + 9440265 aaattctgtttcTAGGAATAGTGACCTAAAGCAgttgaagccaagagtggtcctaagaagcagaatccaaaatggtattttacagctg---agtcatctgctgatggctagcagtaaggatcccatcactggtg--ataggcagaatgtt---attagctccaggcacattagaacaatgaaatcgttaagactgtcacctgagatgaatcggatgggaaaagaaagcactgtctggggacagaatctccagcatttgagaaatttggggaaaataataattataaaaactatggaagaaa----tgactgttgctgggggctatcatttcgctggagaaaggcaatggaaaactggagataattaattaccagtttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8459325 418 + 21915920 aaattctgtttcTAGGAATAGTGACCTAAAGCAgttgaagccaagagtggtcctaagaagcagaatctaaaatggtattttacagctg---agtcatctgctgatggctagcagtgaggatcccatcactggtg--ataggcagaacgtt---attagctccaggcccattagaacaatgaaattgttaagactgtcacctgagatgaatcggatgggaaaagaaagcactgtctggggacagaatctccagcatttgagaaatttggggaaaataataattataaaaactatggaagaaa----tgactgttgctgggggctatcatttcgctggagaaaggcaatggaaaactggagataattaattaccaatttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034197 413 - 90373283 aaattctgtttcTAGGAATAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagaatctaaaatggtattttagagctg---agtcatctgctgatggctagcagtgaggatcccatcactggtg--ataggcagaacgtt---attagctccaggcccattagaacaatgaaattgttaagactgtcacctgagatgaatc-gatgggaaaagaaagcactgtctggggacagaatctcaagcatttgagaaatttggggaaaataataattataaaaactatggaagaaa----tgactgttgctgagggctatcatttcgctggagaaaggcaatggaaaactggaga----taattaccaatttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2213586 418 + 4234846 aaattctgtttcTAGGAATAGTGACCTAAAGCAgttgaagccaagagtggtcctaagaagcagaatctaaaatggtattttacagctg---agtcatctgctgatggctagcagtgaggatcccatcactggtg--ataggcagaacgtt---attagctccaggcccattagaacaaggaaagtgttaagactgtcacctgagatgaattggatgggaaaagaaagcactgtctggggacagaatctcaagcatttgagaaatttggggaaaataataattataaaaactatggaagaaa----tggctgttgctgggggctatcatttcgctggagaaaggcaatggaaaactggagataattaattaccaatttaaagt-aagtgtgaaaaccacagggattgtttggcagcatataaagaatctctG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 217726 418 - 13750039 aaattctgtttcTAGGAATAGTGACCTAAAGCAgttgaagccaggagtggtcctaagaagcagaatctaaaacggtattttacagctg---agtcatctgctgatggctagcagtgaggaccccatcactggtg--acaggtagaacatt---actagccacaggcacattagaacaatgaaattgttaagactttcacctgagatgaatcggatgggaaaagaaagcactgtctggagacagaatctcaagcatttgagaaatttgggggaaataataattataaaaactatggaagaaa----tgactgttgctgagggctatcgtttcactggagaaaggcaatggaaaactggagataattaattaccaatttaaagt-aagtgtgaaaaccacaggtattgtttggcagcatataaagaatctctG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21935295 420 + 50472720 aatttctgtttccaggaatagtgacctaaagcagttgaagctaggagtggtcctaagaagcagaatcgaaaacggtattttagagatg---agtcatctgctgatggccagcagtgaggaccccatcactggtg--atagatagagggtt---attagctccgggcacactagaacaatgcaattgataagaccttcacctggactgaat-ggatgggaagggaaagaagcatctggggacagaatctcaagcatttgagatatctgggggatttagtaattataaaaactat-gaagaaagaaataattgttgctgagggctatcaattcactagagaaagaaaatggaagaccggagataattaattactaatgtaaggt-aagtgtgaaaactacagggattgctcaacagcatataaagaatctctG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5038714 422 + 13128814 aatttctgtttccaggaatagtgacctaaagcagttgaagctaggagtggtcctaagaagcagaatctaaaatggtattttagagata---agtcatctgctgatggccagcagtgaggaccccatcactggtg--atagatagagggtt---attagctccagacacactagaataatgcagttgttaagaccttcacctggattgaatgggatgggaagggaaagtaccatctggggacagaatctcaagcatttgagatatttgggggatttagtaattataaaaactatggaagaaagaagtaactattgctgatggctatcaattcactagagaaagataatggaagactggagataattaattaccaatgtaaggt-aagtgtgaaaaccacagggattgctcaacagcatataaagaatctctG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9613888 422 - 14377064 aatttctgtttccaggaatagtgacctaaagcaGTTGAAGGTaggagtggtcctaagaagcagaatctaaaatagcattttagagatg---agtcatctgctgatggccagcagtgaggaccccatcactggta--atagacagagggtt---actagctccaggaacactagaataatgcagttgttaagaccttcacctggactgaatgggatggGAAGGGAAAGTACCATCTGGGGACAGAATCTCAAGTATTTGAGATATTTGGGGGATTTAGTAATTATAAAAACTATGGAAGTAAGAAATAACTGTTGCTGATGGCTATCAATTCACTAGAGAAAGATAATGGAAGACTGAAGATACTTAATTACCAGTGTAAGTT-AAGTGTGAAAACCACAGGGATTGCTCGACAGCATATGAAGAATCTCTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8751645 421 + 9889416 aatttctgtttccaggaaTAGTGACCTAAAGCAgttgaagctaggagtggtcctaagaagcagaatctaaaatggtattttagagatg---agtcatctgctgatggccagcagtgaggatcccatcactggtg--atagatagagggtt---gttagctccaggcacactagaacaatgcaattgataa-acgttcacctggactgaatgggatgggaagggaaagtaccatctggggacagaatctcaagcatttgagatatttgggggatttagtaattataaaaactatggaagaaagacataactgttactgagggctatcaattcactagagaaagataatggaagactggagataattaattaccaatgtaaggt-aagtgtgaaaaccacagggattgctcaacagcatataaagaatctctG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20760978 414 - 38779656 agagtctgttgccaggaaTACTGACCCAAGCCAGCTGAAGTCAGAAGTGGTCCTAAAAAGCA-----CAAAATGAGAATTTGGAGCTG---AGTCCTGTGAAGATGGTTAGCAGTGAGGGCACCATAACTGTTG--ACAGGTGGAGTGTC---ACTAGTCCCAGGCCTACTATAGCAAAGCAATGGTTGAGACTTTCACCTGAGCTGAATggaatgggaagggaaagccctgtctgagggcaacatctcaagcattggagagatttggaggaaatagtaattataggatctatggaagaaa----tggctactgctgagagttataaattctttggagaacgacaatgaaaaactggagataattaatcaccaattaaatgtaaagtataaaatccagagggattccttcataacatttaaagaacctcta i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78133964 350 + 98207768 agaattTATGCCTAAGTCCGCTAATCTAAGGCAGCTGAACTCTAGGGCTCCTCCAAGAAACAGATGCTAGAACTGGACCTTGGAGTTGGTTAGTCTTCTGTCGATGGTTAGTA-------------------------AGGTGGAGTGCC---ACCAGCCCTTGGTGAATGACATCAGTGCAG---------------CCTGTGCTGGACAAGGTGGGAAGTGAACATTCTGT-----------------------------GTTGGAGAAAAATAGCAATCATAAGGAATAAGCATGGAA----TG-CTATTGCTAAAGGCTATCAATTCATTAAAGAAAGACAATAAAAATCTGGAAA----TAGCCACCAACTAAAAGTCAAGTATGAAAGCCACGGATATTCCTTGGCAGTATATAAAGAATATCTG i mm10.chr16 I 315 I 752 s canFam3.chr31 13836416 418 + 39895921 aaagtc-gtttctaggAATATTGACCTAAGGCA---GAAGTcaggagtggtcct-agaaggagattctaaaatgggactttgatgcta---aatcacctgctgatggctagcagtgaggactccatcactggtgatataggtggagtggtaacaacagctccaggcaaactgttgcaatgcaattgttaagactttcacctggggtgaactgaatgggaagagaaaacactggctgcaggcaacat-tcaagcatttgagagatttgggggaagtagtaattatagggactgtggaaggaa----tggctgttgctgagggctatcaattcacctgagaaaaacaatgaaaaactagagataattaatcaccaatttaaggtaaagtgtgaaagccagagggatcccttggcagcacataaagaatctctg i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I a score=15300.000000 s hg38.chr21_KI270874v1_alt 96476 1 + 166743 C s panTro5.chr21 3721752 1 + 33445071 C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347576 1 + 46275980 C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3286929 1 - 13858734 C i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4469987 1 + 32716333 C i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155424798 1 - 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249366 1 - 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730380 1 + 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8459743 1 + 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034610 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214004 1 + 4234846 C i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218144 1 - 13750039 C i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21935715 1 + 50472720 C i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5039136 1 + 13128814 C i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9614310 1 - 14377064 C i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8752066 1 + 9889416 C i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20761392 1 - 38779656 c i otoGar3.GL873528 C 0 I 7 s canFam3.chr31 13836834 1 + 39895921 c i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e mm10.chr16 78134314 752 + 98207768 I a score=172174.000000 s hg38.chr21_KI270874v1_alt 96477 18 + 166743 CCCAGggtggttggcaag s panTro5.chr21 3721753 18 + 33445071 CCCAGggtggttggcaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347577 18 + 46275980 CCCAGggtggttggcaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3286930 18 - 13858734 CCCAGggtggttggcaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4469988 18 + 32716333 CCCAGggtggttggcaag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155424799 18 - 185818997 TCCAGAgtggttgacaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249367 18 - 192294377 TCCAGAgtggttgacaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730381 18 + 9440265 TCCAGAgtggttgacaag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8459744 18 + 21915920 TCCAGAgtggttggcaag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034611 18 - 90373283 TCCAGAgtggttggcaag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214005 18 + 4234846 TCCAGAgtggttggcaag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218145 18 - 13750039 TCCAGggtggttagcaag i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21935716 18 + 50472720 TCAAGGGTAGCTGGcaag i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5039137 18 + 13128814 TCAAGggtggctcgcaag i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9614311 18 - 14377064 TCAAGggtggctggcaag i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8752067 18 + 9889416 TCAAGGGTGGCTGGcaag i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13836835 18 + 39895921 tctactgtagctgaaagg i canFam3.chr31 C 0 I 553 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e mm10.chr16 78134314 752 + 98207768 I a score=2401951.000000 s hg38.chr21_KI270874v1_alt 96495 272 + 166743 atggccaaatagaaacagctccggtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtactcggctcatctcaccgggagtgattagacagtaggtgcagcccacagagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggggtcaaagagctcctttccctagccaagggaagcaatgagagactgtgccataaggaacaacgaattctggcccagaaactatgcttt s panTro5.chr21 3721771 272 + 33445071 atggccaaataggaacagctctggtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtactcagctcatctcactgggagtgattagacagtaggtgcagcccacagagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggggtcaaagagctcctttccctagccaagggaagcaatgagagactgtgccataaggaacaacgaattctggcccagaaactatgcttt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347595 272 + 46275980 atggccaaataggaacagctctggtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtactcagctcatctcactgggagtgattagacagtaggtgcagcccacagagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggggtcaaagagctcctttccctagccaagggaagcaatgagagactgtgccataaggaacaacgaattctggcccagaaactatgcttt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3286948 270 - 13858734 atggccaaataggaacagttccggtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtacccggctcatctcactgggagtgattagacagtaggtgcagcccacagagggcaac-------acaaagca-ggtggggtgtcacctcacctgggaagtgcaaggggtcaaggagctcctttccctagccaagggaagcaatgagagactgtgccataaggaacaacg-attctggcccagaaactatgcttt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4470006 272 + 32716333 atggccaaataggaaaagctccagtctgcagctcccagtgagatcaacgcagaaggcaggtgacttctgcatttccaactgaggtacccagttcatctcactgggagtgattagacagtaggtgcagcccacggagggcaag-------acaaagcaggatgggatgtcacctcacctgggaagcacaaggggtcaaggagctcctttccctagccaagggaagcaatgagggactgtgccataaggaacaacaaattctagcccagaaactatgcttt i nomLeu3.chr25 C 0 M 100 s rheMac8.chr3 155424817 258 - 185818997 atggccaaataagaacagctccggtttgcagctcccagtgagatcaacgcagaaggcaggtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacggagggcaag-------acaaagtagggtggggtgtc--------------gcacaaggggtcaaagagctccttaccctagccaagggaagcgatgagggactgtgccgtaaggaaaaacaaattctgggccagaaactgtgcttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249385 272 - 192294377 atggccaaataagaacagctccggtttgcagctcccagtgagatcaacgcagaaggcaggtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacggagggcaag-------acaaagtagggtggggtgtcgccttacccaggaagcacaaggggtcaaagagctccttaccctagccaagggaagcaatgagggactgtgccgtaaggaaaaacaaattctgggccagaaactgtgcttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730399 272 + 9440265 atggccaaataagaacagctccggtttgcagctcccagtgagatcaacgcagaaggcacgtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacggagggcaag-------acaaagtagggcggggtgtcgccttacccaggaagcacaatgggtcaaagagctccttaccctagccaagggaagcaatgagggactgtgccgtaaggaaaaacaaattctgggccagaaactgtgcttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8459762 272 + 21915920 atggccaaataagaacagctccagtttgcagctcccagtgagatcaacgcagaaggcaggtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacggagggcaag-------acaaagtagggtggggtgtcgccttacccaggaagcacaaggggtcaaagagctccttaccctagccgagggaagcaatgagggactgtgccgtaaggaaaaacaaattctgggccagaaactgtgcttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034629 272 - 90373283 atggccaagtaagaacagctccggtttgcagctcccagtgagatcaacgcagaaggcaggtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacagagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggggtcaaagagctccttaccctagccaagggaagcaatgaaggactgtgccgtaaggaaaaacaaattccgggccagaaactgtgcttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214023 272 + 4234846 atggccaaataagaacagctccggtttgcagctcccagtgagattaacgcagaaggcaggtggcttttgtatttccaactgaggtacctggctcatctcactgggagtgattagacagtcggtgcagcccacggagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggggtcaaagagctccttaccctagccaagggaagcaatgagggactgtgccataaggaaaaacaaattccgggccagaaactgtgcttt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218163 272 - 13750039 atggccaaataagtacagctccagtttgcagctcccagtgagatcagcgcagaaggcaggtggcttttgtatttccaactgaggtacctggatcatcatactgggagtgattagacagtcagtgcagcccacagagggcaag-------acaaagcagggtggggtgtcgcctcacctgggaagcacaaggagtcaaagagctccttaccctagccaagggaagcaatgagggactgtgttgtaaggaaaaacaaattccgggccagaaactgtgcttt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21935734 279 + 50472720 atggctgaataggaacagctgcagtctgcaatgcgcagtgtgatcaatgctgaaggtggatgatttctgcatttccaacagaagtatccagctagtctcactgggactggttagacagtgggtgcagcccacagagggcaagcaggagcagggagcagggtggggcatcatctcacctgagaacctcaaggggtcaaggaactccctcccctacccaagggaagccatgagggactgtgccctgaggaaccatgcactctggccgagatactatgattt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5039155 279 + 13128814 atggctaaacaggaacatctgcagtctgcagcatgcagtgtgatcaacgcagaaggtgggtgatttctgcatttccaacagaagtacccagctaatctcactggcactggttagacagtgggtgcagcccacagaaggcaagcaggagcagggagcgtggtggggcatcacctcacctgagaacctcaaggggtcgaggaactccctcccctacccaagagaagccatgagggactgtgccccgaggaaccatgcactctggctgagatactatgcttt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9614329 272 - 14377064 atggctgaataggaacatctgcagtct-------gcagtgtgatcaatgcagaaggtgggtgatttctgcatttccaacagaattacccagctaatctcactgggactggttagacagtgggtgcagcccacagacggcaagcaggagcagggagcagggtggggcaacacctcacctgagaacctcaaggggtcgaggaactccctcccctacccaagggaagccatgagggactgtgccctgaggatccatgtactctggcagagatactatgcttt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8752085 279 + 9889416 atggctgaataggattagctgcagtctgcagcgcgcagtgtgatcaatgcagaaggtgggtgatttctgcatttccaacagaagtacccagctaatctcactggaactggttaaacagtgggtgcagcccacagagggcaagccggagcagggagcagggtggggcatcacctcatctgacaatctcaaggggtcaaggaactccctcccctacccaaaggaagccatgagggactgtgccctgaggaaccatgcactcttgccgagatactatgtttt i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=295099.000000 s hg38.chr21_KI270874v1_alt 96767 37 + 166743 ccccacagtcttcacaacctgcagaccaagagattcc s panTro5.chr21 3722043 37 + 33445071 ccccacagtcttcacaacctgcagaccaagagattcc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347867 37 + 46275980 ccccacagtcttcacaacctgcagaccaagagattcc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287218 37 - 13858734 ccccacagtcttcacaacctgcagaccaagagattcc i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155425075 37 - 185818997 ccccacggtcttcaccatctgcggaccaagagattcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249657 37 - 192294377 ccccacggtcttcaccatctgcggaccaagagattcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730671 37 + 9440265 ccccacggtcttcaccatctgcggaccaagagattcc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8460034 37 + 21915920 ccccatggtcttcacaatctgcggaccaagagattcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034901 37 - 90373283 ccccacggtcttcacaatctgcagaccaagagattcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214295 37 + 4234846 ccccatggtcttcacaatctgcggaccaagagattcc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218435 37 - 13750039 ccccacggtcttcacaatctgcggaccaagagattcc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21936013 37 + 50472720 tcctacagtcttctcaacccataggccaagagattcc i calJac3.chr21 C 0 I 44 s saiBol1.JH378168 5039434 37 + 13128814 tcctacagtcttcacaacccatagaccaagagattac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9614601 37 - 14377064 tcctacagtctttgcaacccaaagaccaagtgattcc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8752364 37 + 9889416 tcctacagtctttgcaacccacagaccaagagattcc i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e nomLeu3.chr25 4470278 100 + 32716333 M a score=51749.000000 s hg38.chr21_KI270874v1_alt 96804 10 + 166743 ctcaagtggc s panTro5.chr21 3722080 10 + 33445071 ctcaagtggc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347904 10 + 46275980 ctcaagtggc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287255 10 - 13858734 ctcaagtggc i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155425112 10 - 185818997 ctcaggtgcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249694 10 - 192294377 ctcaggtgcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730708 10 + 9440265 ctcaggtgcc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8460071 10 + 21915920 ctcaggtgcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034938 10 - 90373283 ctcaggtgcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214332 10 + 4234846 ctcaggtgcc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218472 10 - 13750039 ctcaggtgcc i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5039471 10 + 13128814 attgggagcc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9614638 10 - 14377064 attgggagcc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8752401 10 + 9889416 attgggagcc i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e calJac3.chr21 21936050 44 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e nomLeu3.chr25 4470278 100 + 32716333 M a score=24137.000000 s hg38.chr21_KI270874v1_alt 96814 4 + 166743 taca s panTro5.chr21 3722090 4 + 33445071 taca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347914 4 + 46275980 taca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287265 4 - 13858734 taca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4470378 4 + 32716333 tata i nomLeu3.chr25 M 100 C 0 s rheMac8.chr3 155425122 4 - 185818997 taca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249704 4 - 192294377 taca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730718 4 + 9440265 taca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8460081 4 + 21915920 taca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034948 4 - 90373283 tata i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214342 4 + 4234846 taca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218482 4 - 13750039 taca i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5039481 4 + 13128814 tagg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9614648 4 - 14377064 tagg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8752411 4 + 9889416 tagg i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e calJac3.chr21 21936050 44 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=368324.000000 s hg38.chr21_KI270874v1_alt 96818 35 + 166743 ccatcagggccctaggtttcaagcacaaaactggg s panTro5.chr21 3722094 35 + 33445071 ccatcagggccctaggtttcaagcacaaaactggg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347918 35 + 46275980 ccatcagggccctaggtttcaagcacaaaactggg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287269 35 - 13858734 ccatcagggccctgggtttcaagcacaaaactggg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4470382 34 + 32716333 ccaccaggg-cctgggtttcaagcacaaaactggg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155425126 35 - 185818997 ccaccagggccctgggtttcaagcacaaaactggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249708 35 - 192294377 ccaccagggccctgggtttcaagcacaaaactggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730722 35 + 9440265 ccaccagggccctgggtttcaagcacaaaactggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8460085 35 + 21915920 ccaccagggccctgggtttcaagcacaaaactggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034952 35 - 90373283 ccaccagtgccctgggtttcaagcacaaaactcgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214346 35 + 4234846 ccaccagtgccctgggtttcaagcacaaaactggg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218486 35 - 13750039 ccaccagtgtcctgggtttcaagcacaaaactggg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21936094 35 + 50472720 ccaccagggccctgggtttcaagcacaaaactggg i calJac3.chr21 I 44 C 0 s saiBol1.JH378168 5039485 35 + 13128814 ccaccagggtcctgggtttcaagcacaaaactggg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9614652 35 - 14377064 ccaccagggccctgggtttcaagcacaaaactggg i cebCap1.NW_016107322v1 C 0 I 1797 s aotNan1.NW_018487195v1 8752415 35 + 9889416 tcaccagggccctgggtttcaagcacaaaactggg i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=268728.000000 s hg38.chr21_KI270874v1_alt 96853 37 + 166743 tggccatttaggcaggcactgagctagctgcaggagt s panTro5.chr21 3722129 37 + 33445071 cggccatttaggcagacactgagctagctgcaggagt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347953 37 + 46275980 cggccatttaggcagacactgagctagctgcaggagt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287304 37 - 13858734 cggccatttaggcagacactgagctagctgcaggagt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4470416 37 + 32716333 cggccatttaggcagacactgagctagctgcaggagt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155425161 36 - 185818997 tggccatttagtcagatactgagctagctgcaggag- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249743 36 - 192294377 tggccatttagtcagatactgagctagctgcaggag- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730757 36 + 9440265 tggccatttagtcagatactgagctagctgcaggag- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8460120 37 + 21915920 cggccatttagtcagatactgagctagctgcaggagt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15034987 36 - 90373283 tggccatttagtcagatactgagctagctgcaggag- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214381 37 + 4234846 cggccatttagtcagatactgagctagctgcaggagt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218521 37 - 13750039 tggccatttagtcagatactgagctagctgcaggagt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21936129 37 + 50472720 cggctgtttgggcaaacaccaaactagatgcaggaat i calJac3.chr21 C 0 I 4 s saiBol1.JH378168 5039520 37 + 13128814 caactgtttgggcaaacaccaaactagttgcaggaat i saiBol1.JH378168 C 0 I 30 s aotNan1.NW_018487195v1 8752450 37 + 9889416 cggctatctgtgcaaacaccaaactagatgcaggatt i aotNan1.NW_018487195v1 C 0 I 9 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=1261314.000000 s hg38.chr21_KI270874v1_alt 96890 171 + 166743 ttttttcataccccagtggcacctggaatgccagtgagacagaaccattcattcccctggaaagagggctgaagccaggaagccaagtggtctagctcagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcttgctgccagcacaacag s panTro5.chr21 3722166 171 + 33445071 ttttttcataccccagtggcacctggaatgccagtgagacagaaccattcactcccctggaaagagggctgaagccaggaagtcaagtggtctagctcagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcttgctgccagcacaacag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17347990 171 + 46275980 ttttttcataccccagtggcacctggaatgccagtgagacagaaccattcactcccctggaaagagggctgaagccaggaagccaagtggtctagctcagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcttgctgccagcacaacag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287341 171 - 13858734 ttttttcataccccagtggcacctggaatgccagtgagacagaactgttcactcccctggaaagagggctgaagccaggaagccaagtggtctagctcagtggatcccacccccacggagcccagcaagctaagatccactggcttgaaatgcttgctgccagcacaacag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4470453 171 + 32716333 ttttttcataccccagtggcacctggaatgccagtgagacagaaccgttcactcccctggaaagggggctgaagccagaaagccaagtggtctagctcagtggatcccacccccatggaggccagcaagctaagatccactggcttgaaatgcttgctgccagcacagcag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155425197 171 - 185818997 ttttttcataccccagtggcacctggaacgccagagagacagaactgttcactcccctggaaagaaggatgaaggcagggagccaagtggtctagctcagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcctgctgccagcacaacag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249779 171 - 192294377 ttttttcataccccagtggcacctggaacgccagagagacagaactgttcactcccctggaaagaaggatgaaggcagggagccaagtggtctagctcaatggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcctgctgccagcacaacag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730793 171 + 9440265 ttttttcataccccagtggcacctggaacgccagagagacagaactgttccctcccctggaaagaaggatgaaggcagggagccaagtggtctagctcaatggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcctgctgccagcacaacag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8460157 171 + 21915920 ttttttcataccccagtggcacctggaacgccagagagacagaactgttcactcccctggaaagaaggatgaaggcagggagccaagtggtctagctcagtgcatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcctgctgccatcacaacag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15035023 171 - 90373283 ttttttcataccccagtggcacctggaatgccagagagacagaactgttcactcccctggaaagaaggatgaaggcagggagccaagtggtctagcccagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatgcctgctgccagcacaacag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214418 171 + 4234846 ttttttcataccccagtggcacctggaacgccagagagacagtattgttcactcccctggaaagaaggatgaaggcagggagccaagtggtctagctcagtggatcccacccccatggagcccagcaagctaagatccactggcttgaaatacctgctgccatcacaacag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 218558 163 - 13750039 ttttttcataccccagtggcgcctggaatgccagagagacagaactgttcactcccctggaaag--------aggcagggagccaagtggtctagttcagtggatcccaaccccatggagcccagcaagctaagatccactggcttgaaatgcttgctgccagcacaacag i colAng1.NW_012120598v1 C 0 I 6078 s calJac3.chr21 21936170 170 + 50472720 tatatatatatcccaatagcacctgcaatgccagtgagaaagaatcgttcactcccctggaaagggggctgaagccagggaacccaatgttatagctcagtggatcccaactgcatggagcccagcaagctaagatgcactggctt-aaattctcactgccagcacagcag i calJac3.chr21 I 4 C 0 s aotNan1.NW_018487195v1 8752496 170 + 9889416 tatatatatatcccaacagcacctgcaatgccagtgagacagaatcgttcactcccctggaaagggggctgaagccagggaacccaatggtatagctcagtggatcccaactgcatggagcctagcaagctgagatgcactggctt-aaattctcactgccagcacagcag i aotNan1.NW_018487195v1 I 9 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=125139.000000 s hg38.chr21_KI270874v1_alt 97061 18 + 166743 tttgaagtcaacctggga s panTro5.chr21 3722337 18 + 33445071 tttgaagtcaacctggga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17348161 18 + 46275980 tttgaagtcaacctggga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287512 18 - 13858734 tttgaagtcaacctggga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4470624 18 + 32716333 tttgaagtcaacctggga i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155425368 18 - 185818997 tttgaagtcaacctggga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249950 18 - 192294377 tttgaagtcaacctggga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730964 18 + 9440265 tttgaagtcaacctggga i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8460328 18 + 21915920 tttgaagtcaacctggga i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15035194 18 - 90373283 tttgaagtcaacctggga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214589 18 + 4234846 tttgaagtcaacctggga i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21936340 18 + 50472720 tctgaagttgacctggga i calJac3.chr21 C 0 C 0 s aotNan1.NW_018487195v1 8752666 18 + 9889416 tctgaagttgacctggga i aotNan1.NW_018487195v1 C 0 I 1422 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=38632.000000 s hg38.chr21_KI270874v1_alt 97079 8 + 166743 tgctcgag s panTro5.chr21 3722355 8 + 33445071 tgctcaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17348179 8 + 46275980 tgctcaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287530 8 - 13858734 tgctcgac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4470642 8 + 32716333 tgctcaag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155425386 8 - 185818997 tgctcgag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162249968 8 - 192294377 tgctcgag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730982 8 + 9440265 tgctcgag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8460346 8 + 21915920 tgctcgag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15035212 8 - 90373283 tgctcaag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2214607 8 + 4234846 tgctcgag i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21936358 8 + 50472720 catttgag i calJac3.chr21 C 0 I 2256 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e aotNan1.NW_018487195v1 8752684 1422 + 9889416 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=4141136.000000 s hg38.chr21_KI270874v1_alt 97087 984 + 166743 cttggtggggtaggggtgtccagcattactgagactcgagaaagctgttttccccttacagtgtaaacaaagctgccaggaagttcagactgggcagagcccatcacagcttggcaaagctgctatagccagccttcctctctagatttctcctctctgggcaaggcatctc-tgaaa-gaaaggcaccagcccctgttaggggcttatagataaaactcccatctccttgggacagagcacctgggggaaaagagggctgtggacacaggtttagcagacttaaacatgcctgcctgccagctctgaagagagtggcagatctcctagcatagcgctcgagctctgctaagggacagactgcctcctcaagtgggtctctgacccccatgtctcctgactgggagacacctcctagcaggggtcgacagacatgtcatagaggagagctccggctggcatctggtgggtgcccctctgggaagaagcttccagaggcagcaaaaggcagcaatcttagctgctctgcagcctccactggtgatacccaggcaaacagcgtctggagtggacctccaggaaacagggtctggagtggacctccagcaaactccggcagacctgcagcagaggcacctgttagaaggaaaactaataaa-------------catcaatatcaacaaaaaggatgtccaaacataaatcccatccgaaggtcaccaacatcaaagaccaaaggtagataaatccacgaagatgaggaaaaaccagtgaaaaa-ggctgaaaattccaaaaacc---aggcctcttttcctccaaagcatcacaactcctcaccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaacacctccaagctaaaaaaaaaaaaaaaaaaaaaaaaaaaa-----------------catgctctaacccaatgcaaggaagctaagaacctt--aaaaaaa s panTro5.chr21 3722363 928 + 33445071 cttggtggggtaggggtgtccaggattactgagacttcagaaagctgttttccccttacagtgtaaacaaagctgccaggaagttcagactgggcagagcccatcacagcttggcaaagctgctgtagccagccttcctctctagatttctcctctctgggcaaggcatctc-tgaaa-gaaaggcaccagcccctgttaggggcttatagataaaactcccatctccttgggacagagcacctgggggaaaagagggctgtggacacagctttagcagacttaaacattcctgcctgccagctctgaagagagtggcagatctcccagcatagcgctcgagctctgctaagggacagactg-----------------------------------------------ccccctagcaggggtcgacagacatgtcatagaggagagctccggctggcatctggtgggtgcccctctgggaagaagcttccagaggcagcaaaaggcagcaatcttagctgctctgcagcctccactggtgatacccaggcaaacagtgtctggagtggacctccagcaaacagggtctggagtggacctccagcaaactccagcagacctgcagcagaggcgcctgttagaaggaaaactaacaaa-------------catcaatatcaacaaaaaggatgtccaaacataaatcccatccgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgaaaaa-ggctgaaaaatccaaaaacc---aggcctcttttcctccaaaacatcacaactcctcaccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaacaccaccaagctaaaaaaaaaaaaaaaaaaaa--------------------------atgctctaacccaatgcaaggaagctaagaacctt--aaaaaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17348187 926 + 46275980 cttggtggggtaggggtgtccagcattactgagacttcagaaagctgttttccccttacagtgtaaacaaagctgccaggaagttcagactgggcagagcccatcacagcttggcaaagctgctatagccagccttcctctctagatttctcctctctgggcaaggcatctcgtgaaaggaaaggcaccagcccctgttaggggcttatagataaaactcccatctccttgggacagagcacctgggggaaaagagggctgtggacacagctttagcagacttaaacattcctgcctgccagctctgaagagagtggcagatctcccagcatagcgctcgagctctgctaagggacagactg-----------------------------------------------ccccctagcaggggtcgacagacatgtcatagaggagagctccagctggcatctggtgggtgcccctctgggaagaagcttccagaggcagcaaaaggcagcaatcttagctgctctgcagcctccactggtgatacccaggcaaacagtgtctggagtggacctccagcaaacagggtctggagtggacctccagcaaactccagcagacctgcagcagaggcgcctgttagaaggaaaactaacaaa-------------catcaatatcaacaaaaaggatgtccaaacataaatcccatccgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgaaaaa-ggctgaaaaatccaaaaacc---aggcctcttttcctccaaagcatcacaactcctcaccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaacacctccaagactaaaaaaaaaaaaaaaaaaa-----------------------------ctctaacccaatgcaaggaagctaagaacctt---aaaaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3287538 973 - 13858734 cttggtggggtaggggcatccagcattactgagacttgagaaagctgttttccccttacagtgtaaacaaagctgccaggaagttcagactgggcagagcccatcacagcttggcaaagctgctatagccagccttcctctctagatttctcctctctgggcaaggcatctc-tgaaa-gaaaggcaccagcccctgttaggggcttatagataaaactctcatctccttgggacagagcacctgggggaaaagagggctgtggacacagctttagcagacttaaacgttcctgcctgccagctctgaagagagtggcagatctcctagcatagcactcaagctctgctaagggacagactgcttcctcatgtgggtccctgacccccatgtctcctgactgggagacacctcctagcaggagtcaacagacacgtcatagaggagagctccggctggcatctggtgggtgcccctctgggaagaagcttccagaggcagcaaaaggcagcaatctttgctgctctgcagcctccactggtgatacccaggtaaacagcatctggagtggacctccagcaagcagggtctggagtggacctccagcaaactccagcagacctgcagcagacgcgcctgttagaaggaaaactaacaaa-------------catcaatatcaacaaaaaggatgtccaaacatacatcccatccgaaggtcaccagcatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgaaaaa-ggctgaaaattccaaaaacc---aggcctcttttcctccaaagcatcacaactcctcaccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaagataggtaataacaaacacctccaagctaaaaaaaaaaaaaaaaacat----------------------------gctctaacccattgcaaggaagctaagaacctt--aaaaaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4470650 971 + 32716333 cttggtggggtaggggcatccagcattactgaggtttgag-aagctgttttcccctcacagtctaaacaaagatgccaggaagttcagcctgggtggagtccatcacagcttggcgaagctgctatagccagcctgcctctctagattcctcctctctgggcaaggcatttc-tgaaa-gaaaggcaccagcccctgttaggggcttatagataaaactcccatctccttgggacagagcacctgggggaaaagagggctgtggacacagctttagcagacttcaacattcctgcctgccagctctgaagagaatggcagatctcctagcatagcacttgagctctgctaagggacagactgcctcctcaagtgggtc----------------cctgactgggagacacctcctagcagatgttga-agacatgtcgtagaggagagctccagctggcatctggtgggtgcccctctgggaagaagcttccagaggcaggaaaaggcagcaatctttgctgctctgcagcctccactggtgatacccaggcaaa---------------------------cagggtctggagtggacctccagcaaactccagcagacctgcagcagaggcgcctgttagaaggaaaactaacaaacagaaatgaatagcagcaatatcaacaaaaaggatgtccaaacataaatcccataggaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagcaaaaaa-ggctgaaaattccaaaaaccagaaggcctcttttcccccaaagcatcacaactcctcaccagcaaaggaacaaaactggacaaagaataagcttgaagaattgacagaagtagccttcagaaggtaggtaataacaaactcctccaaggttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagcatgctctaacccaatgcaaggaagctaagaa-ctt--aaaaaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155425394 936 - 185818997 cttggcggggtaggggcatccagcattactgaggtttgagaaggccatttgcccctcacagtgtaaacaaagctgccaggaaattcagactgggcagagcccatcacagctcggtaaagctgctatcgtcagcctgcctctctagattcctcctctctgggcaaggcatctc-tgaaa-gataggcaccagcccctcttaggggcttatagataaaactcccatctccttgtgacagagcacctgggggaaaagagggctgtggacacagctttaggagacttaaac-ttcctgcctgccagctctgaagagagtagcagatctcctagcacaccgcttgagctttgctaagggactgactg---cctca----------------------------------agacacctcccaacaggggtcggcagacacctcatagaggagagctctggctggcatgtggtggatacccctctaggaagaagcttccagagacaggaaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaa---------------------------cagggtctggagtggacctccagcaaactccagcaaacctgcagccgaggcgcctgttagaacaaaaactaacaaacagaaaggaatagcatcaatatcaacaaaaaggatgtccaaacataaagcccatttgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgcaaaatggctgaaaattccaaaaaccagaaggcctcttttcctccaaagcatcacaactgctccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtgggtaataacaaattcctccaagctaaaaaaaaaaaaaaaaaaaaaaaaaaag-----------------tgcattctaacccaatgcaaggaagctaagaacctt--aaaaaaa i rheMac8.chr3 C 0 I 293 s macFas5.chr3 162249976 936 - 192294377 cttggcggggtaggggcatccagcattactgaggtttgagaaggccatttgcccctcacagtgtaaacaaagctgccaggaaattcagactgggcagagcccatcacagctcggtaaagctgctatcgtcagcctgcctctctagattcctcctctctgggcaaggcatctc-tgaaa-gaaaggcaccagcccctcttaggggcttatagataaaactcccatctccttgtgacagagcacctgggggaaaagagggctgtggacacagctttaggagacttaaac-ttcctgcctgccagctctgaagagagtagcagatctcctagcacagcgcttgagctctgctaagggactgactg---cctca----------------------------------agacacctcccaacaggggtcggcagacacctcatagaggagagctctggctggcatgtggtggatacccctctaggaagaagcttccagagacaggaaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaa---------------------------cagggtctggagtggacctccagcaaactccagcaaacctgcagccgaggcgcctgttagaacaaaaactaacaaacagaaaggaatagcatcaatatcaacaaaaaggatgtccaaacataaagcccatttgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgcaaaatggctgaaaattccaaaaaccagaaggcctcttttcctccaaagcatcacaactgctccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtgggtaataacaaattcctccaagctaaaaaaaaaaaaaaaaaaaaaaaaaaag-----------------tgcattctaacccaatgcaaggaagctaagaacctt--aaaaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8730990 924 + 9440265 cttggcggggtaggggcatccagcattactgaggtttgagaaggccatttgcccctcacagtgtaaacaaagctgccaggaaattcagactgggcagagcccatcacagctcggtaaagctgctatcgtcagcctgcctctctagattcctcctctctgggcaaggcatctc-tgaaa-gataggcaccagcccctcttaggggcttatagataaaactcccatctccttgtgacagagcacctgggggaaaagagggctgtggacacagctttaggagacttaaac-ttcctgcctgccagctctgaagagagtagcagatctcctagcacagcgcttgagctctgctaagggactgactg---cctca----------------------------------agacacctcccaacaggggtcggcagacacctcatagaggagagctctggctggcatgtggtggatacccctctaggaagaagcttccagagacaggaaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaa---------------------------cagggtctggagtggacctccagcaaactccagcaaacctgcagccgaggcgcctgttagaacaaaaactaacaaacagaaaggaatagcatcaatatcaacaaaaaggatgtccaaacataaagcccatttgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagtgcaaaatggctgaaaattccaaaaaccagaaggcctcttttcctccaaagcatcacaactgctccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtgggtaataacaaattcctt------------aaaaaaaaaaaaaaaaaaaaag-----------------tgcattctaacccaatgcaaggaagctaagaacctt--aaaaaaa i macNem1.NW_012019910v1 C 0 I 5 s cerAty1.NW_012002954v1 8460354 969 + 21915920 cttggcggggtaggggcgtccagcattactgaggtttgagaaggccgtttgcccctcacagtgtaaacaaagctgccaggaaattcagactgggcagagccaatcacagctcagcaaagctgctatcgccagcctgcctctctagattcctcctctctgggcaaggcatctc-tgaaa-gataggcaccagcccctgttaggggcttatagataaaactcccatctccttgtgacagagcacctaggggaaaagagggctgtggacacagctttaggagacttaaac-ttcctgcctgccagctctgaagagagtggcagatctcctagcacagcactcgagctctgctaagggactgactg---cctcaagtgggtccctgacccccgtgcctcctgactgggagacacctcccagcaggggtcggcagacacctcatagagtagagctccagctggcatctggtgggtgcccctctaggaagaagcttccagagacaggaaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaa---------------------------cagagtctggagtggacctccagcaagcttcagcagacctgcagcagaggtgcctgttagaaaaaaacctaacaaacagaaaggaatagcatcaatatcaacaaaaaggatgtccaaacataaagcccatccgaaggttaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaatcagcgcaaaatggctgaaaattacaaaaaccagaaggcctcttttcctctaaagcatcacaactgttccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaattcctccaagctaaaaa-aaaaatttaaaaaaaaaaaaag-----------------catgttctaacccaatgcaaggaagctaagaacctt--aaaaaaa i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr2 15035220 924 - 90373283 cttggcggggtaggggtgtccagcattactgaggtttgagaaggccatttgccccttacagtataaacaaagctgccaggaaattcagactgggcagagcccatcacagctcggtaaagctgctatcgccagcctgcctctctagattccacctctctgggcaaggcatctc-cgaaa-gataggcaccagcccctgttaggggcttatagataaaactcccatctccttgtgacagagcacctgggggaaaagagggctgtggacacagctttaggagacttaaac-ttcccgcctgccagctctgaagagagtagcagatctcctagcacagcgcttgagctctgctaagggactgactg---cctca----------------------------------agacacctcccagcaggggtcggcagacacctcatagaggagagctccggctggcatctggtggatgcccctctaggaagaagcttccagagacaggaaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaa---------------------------cagtgtctggagtggacctccagcaagctccagcagacctgcagcagaggcgcctgttagaacaaaaacta--aaacagaaaggaatagcatcaatatcaacaaaaagtatgtccaaacataaagcccatctgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaaccagcgcaaaatggctgaaaattccaaaaaccagaaggcctcttttcctccaaagcatcacaactgctccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtgagtaataacaaattcctccaagctaaaa----------aaaaaaaaaaaaag-----------------tgcgttctaacccaatgcaaggaagctaagaacctt--taaaaaa i chlSab2.chr2 C 0 I 5 s manLeu1.NW_012102865v1 2214615 970 + 4234846 cttggcggggtaggggcgtccagcattactgaggtttgagaaggccgtttgcccctcacagtgtaaacaaagctgccaggaaattcagactgggcagagccaatcacagctcagcaaagctgctatcgccagcctgcctctctagattcctcctctctgggcaaggcatctc-tgaaa-gataggcaccagcccctgttaggggcttatagataaaactcccatctccttgtgacagagcacctgggggaaaagagggctgtggacacagctttaggagacttaaac-ttcctgcctgccagctctgaagagagtggcagatctcctagcacagcactcgagctctgctaagggactgactg---cctcaagtgggtccctgacccctgtgcctcctgactgggagacacctcccagcaggggtcggcagacacctcatagagtagagctccagctggcatctggtgggtgcccctctaggaagaagcttccagagacaggaaaaggcagcaatctttgctgttctgcaacctccactggtgatacccaggcaaa---------------------------cagggtctggagtggacctccagcaagcttcagcagacgtgcagcagaggtgcctgttagaaaaaaaactaacaaacagaaaggaatagcatcaatatcaacaaaaaggatgtccaaacataaagcccatccgaaggtcaccaacatcaaagaccaaaggtagataaatccatgaagatgaggaaaaatcagtgcaaaatggctgaaaatttcaaaaaccagaaggcctcttttcctctaaagcatcacaactgttccccagcaagggaacaaaactggacaaagaataagtttgatgaattgacagaagtagccttcagaaggtaggtaataacaaattcctccaagctaaaa--aaaaaattaaaaaaaaaaaaag-----------------catgttctaacccaatgcaaggaagctaagaaccttaaaaaaaaa i manLeu1.NW_012102865v1 C 0 I 5 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e aotNan1.NW_018487195v1 8752684 1422 + 9889416 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=72926.000000 s hg38.chr21_KI270874v1_alt 98071 20 + 166743 gaggttagagaaataactaa s panTro5.chr21 3723291 20 + 33445071 gaggttagagaaataactaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17349113 20 + 46275980 gaggttagagaaataactaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3288511 20 - 13858734 gaggttagagaaataactaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4471621 20 + 32716333 gaggttagagaaataactaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162250912 17 - 192294377 ---gttagaggaattgctaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8731919 20 + 9440265 aaggttagagaaataactaa i macNem1.NW_012019910v1 I 5 C 0 s cerAty1.NW_012002954v1 8461324 20 + 21915920 aaggttagagaaataattaa i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr2 15036149 20 - 90373283 aaggttagagaaataactaa i chlSab2.chr2 I 5 C 0 s manLeu1.NW_012102865v1 2215590 20 + 4234846 aaggttagagaaataactaa i manLeu1.NW_012102865v1 I 5 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e aotNan1.NW_018487195v1 8752684 1422 + 9889416 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I e rheMac8.chr3 155426330 293 - 185818997 I a score=9680504.000000 s hg38.chr21_KI270874v1_alt 98091 2063 + 166743 ctagaataacaagtttagaaaagaacataa-----------atgacctgatggagcagaaaaacacagcacaagaacttcatgaatcatacacaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagaaattaaagatca---------------------t--------------------------------------------------------------atataaagtgtgaag-acaaaattagagaaaaaagaattaaaaggaacaaataaagcctccaagaaatatgggactatgtgaagagaccaaacctgcatttgattggtgtacctgaaagcgatagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagactagcaagacaggccaacattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagcaa-cccaagacacaaaattgtcagattcaccaagattgaaatgaaggaaaaaatattaagggcagccagagagaaaggtcaggttacccacaaagtgaagcccatcagactaacagcagatctctctgcagaaaccttacaagccagaagagagtgagggccaatattcaacattctttaagaaaagatttttcaacccagaatttcatatgcagccaaactaagcttcataggcgaagaagaaataaaatcctttacagacaagcaaatgctgaatgattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgcccctgcaaaaacataccaaattgtaaagaccattgacactatgaaaaaaactgcatcaaacaacaggcaaaatagccagctaa---cataatgacaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgccacagttaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgctgtatttaggagactcatctcatgtgcaaagacacacataggttcaatataagagataaaggaagatttaccaagcaaatggaaagc-aa---aaaaagcacgggttgcaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagataaaaggaatcaatgcaacaagaagagctaactatcctaaatatatacgcacccaatacaggagcacccagattcataaagcaagttcttagagacctacaaagagacttagactgccacacaataatagttggagacttcaacaccccactgtcagtattagacag-atcaatgagatagagaattaacaaggatattcaagacttgaactcagctctggaccaagtgggcccgatagacatctacagaactctccacccgaaatcaacagaatatacaatcctctcagcatcacatcacacttattctaaaattgaccacataaatggaagtaaaacattcctcagccaatgcaaaataatggaaaacataacagtctctcagaccacagttcaatcaaattagaactcaggattaagaaactcactcaaaacctcaaaacaacatggaaactgagcaacctgcccctgaatgactactgggttaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacataggcaaaacataccagaatctctgggacacagctaaaggagtgtttagagggaaattcataacactagatacccacaggagaaagtgggaaagatctaaaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaactgaaggagatagagacatgaaaaacacttc-aaaaaatcaatgaatccaggagctgattttttgaaaagattaacaaaatagatatactgttagccagactaacaaagaagaaaagagagaaagaatcaaatagatgcaataaaaaatgataaagggattattgccactgatcccacagaaatacaaactaccatcagagaatactataaacacct s panTro5.chr21 3723311 2063 + 33445071 ctagaataacaagtttagagaagaacataa-----------atgacctgatggagcggaaaaacacagcacaagaacttcatgaatcatacaaaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagagattaaagatca---------------------t--------------------------------------------------------------atataaagtgtgaag-acaaaattagagaaaaaagaattaaaaggaacaaataaagcctccaagaaatatgggactatgtgaagagaccaaacctgcatttgattagtgtacctgaaagcaatagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagactagcaagacaggccaacattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagcaa-cccaagacacaaaattgtcagattcaccaagattgaaatgaaggaaaaaatgttaaaggcagccagagagaaaggtcaggttacccacaaagtgaagcccatcagactaacagcagatctctctgcagaaaccttacaagccagaagagagtgagggccaatattcaacattctttaagaaaagaattttcaacccagaatttcatatgcagccaaactaagcttcataggcgaagaagaaataaaatcctttacagacaagcaaatgctgaatgattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgcccctgcaaaaacataccaaattgtaaagaccattgacactatgaaaaaaactgcatcaaacaacaggcaaaatagccagctaa---cataatgacaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgccacagttaaaagacacagacttgcaaactggataaagagtcaagacccattggtgtgctgtatttaggagactcatctcatgtgcaaagacacacataggttcaatataagagataaaggaagatttaccaagcaaatggaaagc-aa---aaaaagcacgggttgcaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagataaaaggaatcaatgcaacaagaagagctaactatcctaaatatatacgcacccaatacaggagcacccagattcataaagcaagttcttagagacctacaaagagacttagactgccacacaataatagttggagacttcaacaccccactgtcagtattagacag-atcaatgagacagagaattaacaaggatattcaagacttgaactcagctctggaccaagtgggcccaatagacatctacagaactcttcacccgaaatcaacagaatatacaatcctctcagcatcacattgtacttattctaaaattgaccacataaatggaagtaaaacattcctcagccaatgcaaaataatggaaaacataacagtctctcagaccacagttcaatcaaattagaactcaggattaagaaactcactcaaaacctcaaaacaacatggaaactgagcaatctgcccctgaatgactactgggttaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacaaaggcaaaacataccagaatctctgggacacagctaaatgagtgtttagagggaaatttataacactagatacccacaggagaaagtgggaaagatctaaaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaactgaaggagatagagacatgaaaaacacttc-aaaaaatcaatgaatccaggagctgattttttgaaaagattaacaaaatagatatactgttagccagactaataaagaagaaaagagagaaagaatcaaatagatgcagtaaaaaatgataaagggattatcgccactgatcccacagaaatacaaactaccatcagagaatactataaacacct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17349133 2063 + 46275980 ctagaataacaagtttagagaagaacataa-----------atgacctgatggagcggaaaaacacagcacaagaacttcatgaatcatacacaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagagattaaagatca---------------------t--------------------------------------------------------------atataaagtatgaag-acaaaattagagaaaaaagaattaaaaggaacaaataaagcctccaagaaatatgggactatgtgaagagaccaaacctgcatttgattagtgtacctgaaagcaatagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagactagcaagacaggccaacattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagcaa-cccaagacacaaaattgtcagattcaccaagattgaaatgaaggaaaaaatgttaaaggcagccagagagaaaggtcaggttacccacaaagtgaagcccatcagactaacagcagatctctctgcagaaaccttacaagccagaagagagtgagggccaatattcaacattctttaagaaaagaattttcaacccagaatttcatatgcagccaaactaagcttcataggcgaagaagaaataaaatcctttacagacaagcaaatgctgaatgattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgcccctgcaaaaacataccaaattgtaaagaccattgacactatgaaaaaaactgcatcaaacaacaggcaaaatagccagctaa---cataatgacaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctaaatgccacagttaaaagacacagacttgcaaactggataaagagtcaagacccattggtgtgctgtatttaggagactcatctcatgtgcaaagacacacataggttcaatataagagataaaggaagatttaccaagcaaatggaaagc-aa---aaaaagcacgggttgcaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagataaaaggaatcaatgcaacaagaagagctaactatcctaaatatatacgcacccaatacaggagcacccagattcataaagcaagttcttagagacccacaaagagacttagactgccacacaataatagttggagacttcaacaccccactgtcagtattagacag-atcaatgagacagagaattaacaaggatattcaagacttgaactcagctctggaccaagtgggcccaatagacatctacagaactctccacccgaaatcaacagaatatacaatcctctcagcatcacatcgcacttattctaaaattgaccacataaatggaagtaaaacattcctcagccaatgcaaaataatggaaaacataacagtctctcagaccacagttcaatcaaattagaactcaggattaagaaactcactcaaaacctcaaaacaacatggaaactgagcaatctgcccctgaatgactactaggttaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacaaaggcaaaacataccagaatctctgggacacagctaaatgagtgtttagagggaaatttataacactagatacccacaggagaaagtgggaaagatctaaaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaactgaaggagatagagacatgaaaaacacttc-aaaaaatcaatgaatccaggagctgattttttgaaaagattaacaaaatagatatactgttagccagactaataaagaagaaaagagagaaagaatcaaatagatgcagtaaaaaatgataaagggattatcgccactgatcccacagaaatacaaactaccatcagagaatactataaacacct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3288531 2059 - 13858734 ctagaataacaagtttagagaagaacataa-----------atgacgtgatggagcagaaaaacacagcacaaaaacttcatgaatcatacacaactatcaatagctgaatcaatcaagtggaagaaagga-atcagagagattaaagatca---------------------t--------------------------------------------------------------atataaagtgtgaag-acaaaattagagaaaaaagaattaaaaggaacaaataaagcctccaagaaatatgggactatgtgaagagaccaaacctgcatttgattggtgtacctgaaagcgacagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagactag-aagacaggccaacattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagc-a-cgcaagacacataattgtcagattcaccaagattgaaatgaaggaaaaaatgttaagggcagccagagagaaaggacaggttacccacaaagtgaagcccatcagactaacagcagatctctctgcagaaaccttacaagccagaagagagtgagggccaatattcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaactaagcttcataggcgaagaagaaataaaatcttttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttactggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaattgtaaagaccattgacactatg-aaaaaactgcatcaattaacaggcaaaatagccagctaa---cataatgacaggatcagattcacacataataatattaaccttaaatataaacaggctgaatgccccaactaaaggacacagactggcaaattggataaagagtcaagacccattggtgtgctgtatttaggagactcatctcatgtgcaaagacacacataggttcaatataagagataaaggaagatttaccaagcaaatggaaagc-aa---aaaaagcacgggttgcaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagataaaaggaatcaatgcaacaagaagagctaactatcctaaatatatacgcacccaatacgggagcacccagattcataaagcaagttattagagacctacaaagagacttagactgccacacaataatagttggagacttcaacaccccactgtcagtattagacagaatcaatgagacagagaattaacaaggatgttcaagacttgaactgagctccggaccaagcgggcccgatagacatctacagaactctccacccgaaatcaacagaatatacaatcctctcagcatcacatcgcacttattctaaaattgaccacataaatggaagtaaaacattcctcagccaatgcaaaataatggaaaacataacagtctctcagacc-cagtttaatcaaattagaactcaggattaagaaactcactcaaaacctcaaaacaacatggaaactgagcaacctgcccctgaatgactaccgggttaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacaaaggtaaaacataccagaatctctgggacacagctaaaggagtgtttagagggaaatttataacactagatgcccacaggagaaagtgggaaagatct-aaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaactgaaggagatagagacaggaaaaacacttcaaaaaaattaatgaatccaggagctgattttttgaagagattaacaaaatagatatactgttagccagactaacaaagaagaaaagagagaaagaatcaaatagatgcaataaaaaatgataaagggattatcgccactgatcccacagaaatacaaactaccatcagagaatactataaacacct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4471641 2075 + 32716333 ctagaataaccagtttagagaagaacataa-----------atgacctgatggagcagaaaaacacagcacaagaacttcatgaatcatacagaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagagattaaagatca---------------------t------------------------------------------a---------tatgtatatgatataaagcgtgaag-acaaaattagagaaaaaagaattaaaaggaacgaataaagcctccaagaaatatgggactatgtgaagagaccaaacctacatttgattggtgtacctgaaagtgacagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagactagtgagacaggccaatattcaaattcaggaaatacagagaacaccacaaagatactccttgagaaaagcaa-cccaagacacataattgtcagattcaccaagattgaaatgaaggaaaaaatgttaagggcagccagagagaaagatcaggttacccacaaagtgaagcccatcagactaacagcagacctctctgcagaaaccttacaagccagaagagagtgagggccaatattcaacattcttaaagaaaagaattttcaacccaaaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacagaagctcctgaaggaaccactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaattgtaaagaccattgacactatg-aaaaaactgcatcaattaatgggcaaaataaccagctagcatcataatgacaggaccaaattcacacataacaatattcaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattgttgtgctgtatttaggagactcatctcatgtgcaaagacaaacataggttcaatataagagataaaggaagatttaccaagcaaatggaaagcaaa---aaaaagcacaggttacaatcctagtctcttataaa--agactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactaacctaaatatatacgcacccaatacaggagcacccagattcagaaagcaagtttttagaggcctacaaagagacttagactcccacacaataatagttggagactttaacaccccactgtcagtattagacag-attaatgagacagaaaattaacaaggatattcaagacttgaactcagctctggaccaagcaggcccaatggacatctacagaactctccacccaaaatcaacagaatatacaatcctctcatcaccacatcgcatttattctaaaattgactgcataaatggaagtaaaacattcctcagccaatgcaaaaaaatggaaaacataacagtctctcataccacagttcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaacatggaaactgagcaacctgcccctgaatgactactgggtaaataacaaaattaaggcagaaataaataagtactttgaaaccaatgagaacaaaggcaaaacataccagaatctctgggacacagctaaaggagtgtttagagggaaacttataacactaaatgcccacaggagaaagtgggaaagatctaaaatcaacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaagcctagcagaaggcaagaaataactaagatcagagcagaactgaaggagatagagacatgaaaaactattc-aaaaaatcaatgaattcaggagctggttttttgaaaagattaacaaaatagatagatcactagccagactaataaagaagaaaagggag-aagaataaaat-gacaaaataaaaaatgataaaggggatatcaccactgatcctacagaaatacaaactaccatcagataatactatgaacacct i nomLeu3.chr25 C 0 I 23 s rheMac8.chr3 155426623 2094 - 185818997 ctagaataaccagtttagagaagatcataa-----------atgacaagatggagctgaaaaacacagcacaagaacttcatgaagcgtacacaactatcaataactgaatcaatcaagtggaagaaaggatatcagagagattaaagatcaact------------------t--------------------------------ttatatatcta---------tatatatacaatataaagtgtgaag-acaaaattagaggaaaaagaatacaaaggaacg-ataaagcctccaagaaatatgggactatgtgaagaagccaaacctacatttgattggtgtacctgaaagtgatgtggagaatcgaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaacatcacaaagatactccttgagaaaagcaaccccaagacacataattgtcagattcaccaaggttgaaatgagcgaaaaaatgttaagggcagccagagagaaaagtcgggttatccacaaagggaagcccatcagactaacagcaaatatctctgcagaaaccctacaagccagaagagagtgagaaccaatattaaacattcttaaagaaaaaaattttaaacccagaatttcatatccagccaaactacacttcataagtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccagtgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattaacagaaaaaatagccagctagcatcataatgtcaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgttgtatttaggagactcatctcatgtgcaaagacacgcataggttcaatataagagatacaggaatatttaccaagcaaatgaaaaga-aaaa-aaaaagcacaggttgcaaccctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagagacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccattgtcagtattagacag-atcaatgagacagaaaattaacaaggatattcaggactggaactcagctctggaccaagcaggcctgatagacatctacagaactctccacctgaaatcaacagaatatacattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaatgtggaaactgagcaacctgcccctgaatgactactgggtaaataaagaaattagggcagaaataaatgagttatttgaaaccaatgagaaaaaagacacaacataccagagtctctgggacacagctaaagcagtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacatctagaattgacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaattactaagatcagagcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaatccaggagctggttttttgaaaacattaacaaaacagatagactgttagccagactaataaagaaaaaaagagagaaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacacct i rheMac8.chr3 I 293 C 0 s macFas5.chr3 162250929 2105 - 192294377 ctagaataaccagtttagagaagaacataaatgacctgatgatgacaagatggagctgaaaaacacagcacaagaacttcatgaagcgtacacaactatcaataactgaatcaatcaagtggaagaaaggatatcagagagattaaagatcaact------------------t--------------------------------ttatatatcta---------tatatatacaatataaagtgtgaag-acaaaattagaggaaaaagaatacaaaggaacg-ataaagcctccaagaaatatgggactatgtgaagaagccaaacctacatttgattggtgtacctgaaagtgatgtggagaatcgaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaacatcacaaagatactccttgagaaaagcaaccccaagacacataattgtcagattcaccaaggttgaaatgagcgaaaaaatgttaagggcagccagagagaaaagtcgggttatccacaaagtgaagcccatcagactaacagcaaatatctctgcagaaaccctacaagccagaagagagtgagaaccaatattaaacattcttaaagaaaaaaattttcaacccagaatttcatatccagccaaactacacttcataagtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccagtgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattaacagaaaaaatagccagctagcatcataatgtcaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgttgtatttaggagactcatctcatgtgcaaagacacgcataggttcaatataagagatacaggaatatttaccaagcaaatggaaaga-aaaa-aaaaagcacaggttgcaaccctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagagacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccattgtcagtattagacag-atcaatgagacagaaaattaacaaggatattcaggactggaactcagctctggaccaagcaggcctgatagacatctacagaactctccacctgaaatcaacagaatatacattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaatgtggaaactgagcaacctgcccctgaatgactactgggtaaataaagaaattagggcagaaataaatgagttatttgaaaccaatgagaaaaaagacacaacataccagagtctctgggacacagctaaagcagtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacatctagaattgacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaattactaagatcagagcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaatccaggagctggttttttgaaaacattaacaaaacagatagactgttagccagactaataaagaaaaaaagagagaaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacacct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8731939 2094 + 9440265 ctagaataaccagtttagagaagatcataa-----------atgacaagatggagctgaaaaacacagcacaagaacttcatgaagcatacacaactatcaataactgaatcaatcaagtggaagaaaggatatcagagagattaaagatcaact------------------t--------------------------------ttatatatcta---------tatatatacaatataaagtgtgaag-acaaaattagaggaaaaagaatacaaaggaatg-ataaagcctccaagaaatatgggactatgtgaagaagccaaacctacatttgattggtgtacctgaaagtgatgtgaagaatcgaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaacatcacaaagatactccttgagaaaagcaaccccaagacacataattgtcagattcaccaaggttgaaatgagcgaaaaaatgttaagggcagccagagagaaaagtcgggttatccacaaagtgaagcccatcagactaacagcaaatatctctgcagaaaccctgcaagccagaagagagtgagaaccgatattaaacattcttaaagaaaaaaattttcaacccagaatttcatatccagccaaactacacttcataagtgatgaagaaataaaatcctttacagacaagcaaatgctaaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccaatgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattaacagaaaaaatagccagctagcatcataatgtcaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgttgtatttaggagactcatctcatgtgcaaagacacgcataggttcaatataagagatacaggaatatttaccaagcaaacggaaaga-aaaa-aaaaagcacaggttgcaaccctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagagacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccattgtcagtattagacag-atcaatgagacagaaaattaacaaggatattcaggactggaactcagctctggaccaagcaggcctgatagacatctacagaactctccacctgaaatcaacagaatatacattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaatgtggaaactgagcaacctgcccctgaatgactactgggtaaataaagaaattagggcagaaataaatgagttatttgaaaccaatgagaaaaaagacaaaacataccagagtctctgggacacagctaaagcagtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacatctagaattgacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaattactaagatcagggcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaatccaggagctggttttttgaaaacattaacaaaacagatagactgttagccagactaataaagaaaaaaagagagaaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacacct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8461344 2115 + 21915920 ctagaataaccagtttagagaagatcataa-----------atgaccagatggagctgaaaaacacagcacaagaacttcatgaagcctacacaactatcaataactgagtcaatcaagtggaagaaaggatatcagagagattaaagatcaacttatttatttatttacttat--------------------------------ttatttatttatt-------tatttatatgatataaagtgtgaag-aaaaaattagagaaaacagaatacaaaggaatg-ctaaagcctccaaaaaatatgggactatgtgaagaggccaaacctacatttgattggtgtgcctgaaagtgatgtggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaatgccacaaagatactccttgagaaaagcaaccccaagacacataattgtcagattcatcaaggttgaaatgagggaataaatgttaagggcagccagagagaaaagtcgggttacccacaaagtgaagcccatcacactaacagcaaatatctctgcagaaaccctacaagccagaagagagtgagagccaatattaaacattcttaaagaaaaaaattttcaacccagaatttcatatccagccaaactacacttcataagtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattagcagaaaaaatagccagctagcctcataatgtcaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctgaatgccccaactaaaaggcacagactggcaaattggataaagagtcaagatccattggtgtgttgtatttaggagactcgactcatgtgcaaagacacacataggttcaatataagagatacaggaatatttaccaagcaaatggaaaga-aaaacaaaaagcacaggttgcaatcctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagagacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccactgtcagtattagacag-atcaatgagacagaaaattaacaaggatattcaggactggaactcagctctggaccaagcagacctgatagacatctacagaactctccacctgaaatcaacagaatatacattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaacgtggaaactgagcaacctgcccctgaatgactactgggtaaataaggaaattagggcagaaataaatgagttatttgaaaccaatgagaacaaagacaaaacataccagagtctctgggacacagctaaagcagtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacatctagaattgacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaatccaggagctggttttttgaaaacattaacaaaacagatagactgttagccagactaataaagaaaaaaagagagaaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacacct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15036169 2136 - 90373283 ctagaataaccagtttagagaagatcataa-----------atgacaagatggagctgaaaaacacagcacaagaatttcatgaagcatacacaactatcaataactgaatcaatcaagtggaagaaaggatatcaaaaagattaaagatcaact------------------tttatatatgtattttatatatatatatatatattatatatgtattttatatatatatatatgatataaagtgtgaag-acaaaattagaggaaaaagaatacaaaggaatg-ataaagcctccaagaaatatgggactatgtgaagaagccaaacctacatttgattggtgtacctgaaagtgatgtggagaatcgaaccaagttggaaaacactcttcaggatattttccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaacaccacaaagatattccttgagaaaagcaaccccaagacacataattgtcagattcaccaaggttgaaatgagcgaaaaaatgttaagggcagccagagagaaaagtcgggttatccacaaagtgaagcccatcagactaacagcaaatatctctgcagaaaccctacaagccagaagagagtgagagccaatattaaacattcttaaagaaaaaaattttcaacccagaatttcatatccagccaaactacgcttcataagtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattaacagaaaaaatagccagctagcatcataatgtcaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgttgtatttaggagacttatctcatgtgcaaagacacgcataggttcaatataagagatacaggaagatttaccaagcaaatggaaaga-aaaacaaaaagcacaggttgcaatcctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagagacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccactgtcagtattagacag-atcaatgagacagaaaattaacaaggatattcaggactggaactcagctctggaccaagcaggcctgatagacatctacagaactctccacctgaaatcaacagaatatacattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaacgtggaaactgagcaacctgcccctgaatgactactgggtaaataaagaaattagggcagaaataaatgagttatttgaaaccaatgagaataaagacaaaacataccagagtctctgggacacagctaaagcagtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacatctagaattgacaccctaacatcacaattaaaagaactagtgaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaattcaggagctggttttttgaaaacattaacaaaacagataaactgttagccagactaataaagaaaaaaagagagcaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacatct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2215610 2100 + 4234846 ctagaataaccaatttagagaacatcataa-----------atgaccagatggagctgaaaaacacagcacaagaacttcatgaagcatacacaactatcaatagctgaatcaatcaagtggaagaaaggatatcagagagattaaagatcaact------------------tct------------------------------ttatttatttatt-------tatttatatgatataaagtgtgaagaaaaaaattagagaaaacagaatacaaaggaatg-ctaaagcctccaagaaatatgggactatgtgaagaggccaaacctacatttgattggtgtgcctgaaagtgacaggaagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccagcctagcaagacaggccaacattcaaattcgggaaatacagagaatgccacaaagatactccttgagaaaagcaaccccaagacacataattgtcagattcatcaaggttgaaatgagggaataaatgttaagggcagccagagagaaaagtcaggttacccacaaagggaagcccatcagactaacagcagatctctcagcagaaaccctatgatccagaagagagtgagagccaatattaaacattcttaaagaaaaaaattttcaacccagaatttcatatccagccaaactacacttcataagtgaagaagaaataaaatcctttacagacaagcaaatgctgaaagattttgtcaccaccaggtctgccttacaggagctcctgaaggaagcactaaatatggaaaggaaaagccagtacctgccactgcaaaaacataccaaattgtaaagaccatcaacactatg-aaaaaactgcatcaattaacagaaaaaatagccagctagcatcataatgtcaggatcaaattcacacataacaatattaaccttaaatgtaaatgggctgaatgccccaactaaaagacacagactggcaaattggataaagagtcaagacccattggtgtgttgtatttaggagactcaacttatgtgcaaagacacgcataggttcaatataagagatacaggaatatttaccaagcaaatggaaaga-aaaacaaaaagcacaggttgcaatcctagtctcttataaaacagactttaaaccaacaaagatcaaaaaagacaaaaggaatcaatgcaacaggaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagttcttagtgacctaaaaagagacttagactcccacacaataatagttggagactttaacaccccactgtcagtattagacag-atcaatgagacagaaaattaacaaggatactcaggactggaactcagctctggaccaagcaggcctgatagacatctacagaactctccacctgaaatcaacagaatatacattcttctcagcaccacatcgcacttactctaaaattgaccacataaatggaagtaaaacactcctcagcaaatgcaaaagaatggaaaacataacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcactcaaaaccacaaaacaacgtggaaactgagcaacctgcccctgaatgactactgggtaaataaagaaattagggcagaaataaatgagttatttgaaaccaatgagaacaaagacaaaacataccagagtctctgggacacagctaaagcagtgtttagagggaaatttatagcactaaatgcccacaggagaaagtgggaaacatctagaattgacaccctaacatcacaattaaaagaactagtaaagcaagagaaaacaaattcaaacctagcagaagacaagaaataactaagatcagagcagaattgaaggagacagagacacaaaaaacacttcaaaaaaatcaatgaatccaggagctggttttttgaaaacattaacaaaacagatagactgttagccagactaataaagaaaaaaagagagaaagaatcaaatagacgcaatacaaaataataaagggaatatcaccactgaacccacagaaatacaaactaccatcagagaatactataaacacct i manLeu1.NW_012102865v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e aotNan1.NW_018487195v1 8752684 1422 + 9889416 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=14733.000000 s hg38.chr21_KI270874v1_alt 100154 6 + 166743 gtacac s panTro5.chr21 3725374 6 + 33445071 gtacac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17351196 6 + 46275980 gtacac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3290590 6 - 13858734 gtacgc i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155428717 6 - 185818997 ctatgc i rheMac8.chr3 C 0 I 17 s macFas5.chr3 162253034 6 - 192294377 ctatgc i macFas5.chr3 C 0 I 17 s macNem1.NW_012019910v1 8734033 6 + 9440265 ctatgc i macNem1.NW_012019910v1 C 0 I 17 s cerAty1.NW_012002954v1 8463459 6 + 21915920 ctatgc i cerAty1.NW_012002954v1 C 0 I 17 s chlSab2.chr2 15038305 6 - 90373283 ctatgc i chlSab2.chr2 C 0 I 17 s manLeu1.NW_012102865v1 2217710 6 + 4234846 ctatgc i manLeu1.NW_012102865v1 C 0 I 17 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e aotNan1.NW_018487195v1 8752684 1422 + 9889416 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I e nomLeu3.chr25 4473716 23 + 32716333 I a score=5568.000000 s hg38.chr21_KI270874v1_alt 100160 10 + 166743 tttatttgca s panTro5.chr21 3725380 10 + 33445071 tttatttgca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17351202 10 + 46275980 tttatttgca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3290596 10 - 13858734 tttatttgca i gorGor5.CYUI01015003v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e aotNan1.NW_018487195v1 8752684 1422 + 9889416 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I e cerAty1.NW_012002954v1 8463465 17 + 21915920 I e macNem1.NW_012019910v1 8734039 17 + 9440265 I e manLeu1.NW_012102865v1 2217716 17 + 4234846 I e chlSab2.chr2 15038311 17 - 90373283 I e macFas5.chr3 162253040 17 - 192294377 I e rheMac8.chr3 155428723 17 - 185818997 I e nomLeu3.chr25 4473716 23 + 32716333 I a score=1824542.000000 s hg38.chr21_KI270874v1_alt 100170 387 + 166743 tagaagaaattgataaattcctggacatatacaccctgcctagactaaaccaagaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaaagcccgggaccagatgaattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaa---ggattcctctttaactctttttacgaggccaggatcatcctgatatcgaaacctgccatagacacaccaaaaaaaggaagtttcaggccaatatccctgatgaacatcaatgcaaatatcctcaataaaatactgacaaaccgaatccagcagcacg s panTro5.chr21 3725390 386 + 33445071 tagaagaaattgataaattcctggacatatacaccctcccaagactaaaccaggaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaaa-cccgggaccagatgaattcacagccagattctacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaa---ggattcctctttaactctttttacgaggccaggatcatcctgatatcaaaacctgccatagacacaccaaaaaaaggaagtttcaggccaatatccctgatgaacatcaatgcaaatatcctcaataaaatactgacaaacagaatccagcagcaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17351212 385 + 46275980 tagaagaaattgataaattcctggacatatacaacctcccaagactaaaccaggaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaa--cccgggaccagatgaattcacagccagattctacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaa---ggattcctctttaactctttttacgaggccaggatcatcctgatatcaaaacctgccatagacacaccaaaaaaaggaagtttcaggccaatatccctgatgaacatcaatgcaaatatcctcaataaaatactgacaaacagaatccagcagcaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3290606 386 - 13858734 tagaagaaattgataaatccctggacatatacaccctcccaagactaaaccaggaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaag-cccgggaccagatgaattcacagccagattccacgagaggtacaaagaggagctggaaccattccttctgaaactattccaaaccaaggaaaaa---ggattcctctttaactctttttacgaggccagcatcatcctgatattgaaacctgccatagacacaccaaaaaaaggaagcttcaggccaatatccctgatgaacatcaatgcaagtatcctcaataaaatactgacaaactgaatccagcagcacg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4473739 386 + 32716333 tagaagaaatggataaattactgcacacatacaccctcccaagactaaaccaggaagaagtcaaatgcctgaatagaccaataacaagttctgagattgaggcagtacttaatagcctaccaaccagaaaaaaag-cccgggaccagatggattcacagccagattccatgagaggtacaaagaggagctggtaccattgcttctgaaactattccaaaccaaagaaaaa---ggactcctctttaactttttttatgagggcagcatcatcctgataccgaaacctgccatagacacaccaaaaaaaggaagtttcaggccaatatccctaatgaacatcaatgcaaaaatccttaataaaatactgacaaaccgaatccagcaacaca i nomLeu3.chr25 I 23 C 0 s rheMac8.chr3 155428740 388 - 185818997 tagatgaaattgataaatttctggacacacacaccctcccaagactaaaccatgaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaacc-aaaaaaaag-cccaggatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaacagggcctcctttttagctctttttatgaggccagcatcatcctgataccaaaacctgccatagacacaccaaaaaaaggaagtttcagacccatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgacaaaccgaatccagcagcaca i rheMac8.chr3 I 17 C 0 s macFas5.chr3 162253057 388 - 192294377 tagatgaaattgataaatttctggacacacacaccctcccaagactaaaccatgaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaacc-aaaaaaaag-cccaggatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaacagggcctcctttttagctctttttatgaggccagcatcatcctgataccaaaacctgccatagacacaccaaaaaaaggaagtttcagacccatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgacaaaccgaatccagcagcaca i macFas5.chr3 I 17 C 0 s macNem1.NW_012019910v1 8734056 388 + 9440265 tagatgaaattgataaatttctggacacacacaccctcccaagactaaaccatgaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaacc-aaaaaaaag-cccaggatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaacagggcctcctttttagctctttttatgaggccagcatcatcctgataccaaaacctgccatagacacaccaaaaaaaggaagtttcagacccatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgacaaaccgaatccagcagcaca i macNem1.NW_012019910v1 I 17 C 0 s cerAty1.NW_012002954v1 8463482 388 + 21915920 tagatgaaattgataaatttctggacacatacaccctcccaagactaaaccgtgaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaacc-aaaaaaaag-cccaggatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaacagggcctcctttttagctctttttatgaggccagcatcatcctgataccaaaacctgccatagacacaccaaaaaaaggaagtttcaggcccatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgacaaaccgaatccagcagcaca i cerAty1.NW_012002954v1 I 17 C 0 s chlSab2.chr2 15038328 389 - 90373283 tagatgaaattgataaatttatggacacacacactctcccaagactaaaccatgaagaagtcaaatccctgaatagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaag-cccagtatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaacagggcctcctttttagctctttttatgaggccagcatcatcctgataccaaaacctgccatagacataccaaaaaaaggaagtttcaggcccatatccctgatgaacatcgatgcaaaaatcctcaataaaatactgaaaaaccgaatccagcagcaca i chlSab2.chr2 I 17 C 0 s manLeu1.NW_012102865v1 2217733 389 + 4234846 tagatgaaattgataaatttctggacatacacaccctcccaagactaaaccatgaagaagtcaaatccctgaacagaccaataacaagttctgagattgaggcagtaattaatagcctaccaaccaaaaaaaaag-cccaggatcagatggattcacagccagattccacgagaggtacaaagaggagctggtaccattccttctgaaactattccaaaccaaagaaaaacagggcctcctttttagctctttttatgaggccagcatcatcctgataccaaaacctgccatagacacaccaaaaaaaggaagtttcaggcccatatccctgatgaagatcgatgcaaaaatcctcaataaaatactgacaaaccgaatccagcagcaca i manLeu1.NW_012102865v1 I 17 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e aotNan1.NW_018487195v1 8752684 1422 + 9889416 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=340713.000000 s hg38.chr21_KI270874v1_alt 100557 62 + 166743 tcaaaaagtttatccaccacgatcaagtcagctccatccctgagatgcaaggctggtccacc s panTro5.chr21 3725776 62 + 33445071 tcaaaaagtttatccaccacgatcaagtcagctccatccctgagatgcaaggctggtccacc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17351597 62 + 46275980 tcaaaaagtttatccaccacgatcaagtcagctccatccctgagatgcaaggctggtccacc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3290992 62 - 13858734 tcaaaaagtttatccaccacgatcaagtcagctccatccctgagatgcaaggctggtccacc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4474125 62 + 32716333 tcaaaaagtttatccaccacgatcaagtcagctccatccctgagatgcaaggctggtccacc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155429128 62 - 185818997 tcaaaaagtttatccaccaccatcaagtcagctctatccctgagatgaaaggctggtccaac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162253445 62 - 192294377 tcaaaaagtttatccaccaccatcaagtcagctctatccctgagatgaaaggctggtccaac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8734444 62 + 9440265 tcaaaaagtttatccaccaccatcaagtcagctctatccctgagatgaaaggctggtccaac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8463870 62 + 21915920 tcaaaaagtttatccaccaccatcaagtcagctctatccctgagatgaaaggctggtccaac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15038717 62 - 90373283 tcaaaaagtttatccaccaccatcaagtcagctctatccctgagatgcaaggctggtccaac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2218122 62 + 4234846 tcaaaaagtttatccaacaccatcaggtcagctctatccctgagatgaaaggctggtccaac i manLeu1.NW_012102865v1 C 0 C 0 s aotNan1.NW_018487195v1 8754106 62 + 9889416 tcaaaaagcttatttaccatgataaagtcggcttcatccctggaatgaaaggctggtttaat i aotNan1.NW_018487195v1 I 1422 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e cebCap1.NW_016107322v1 9614687 1797 - 14377064 I e saiBol1.JH378168 5039557 30 + 13128814 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=4095495.000000 s hg38.chr21_KI270874v1_alt 100619 646 + 166743 atacacaaatcaataaacataatccatcatataaacagaaccaataatgaaaacc-acatgattatctcaacagatgcagaaaaggccttcaacaaaattcaacaccccttcaagctaaaaactctcaataaactaggtatcaatggaatgtatctcaaaataataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgccctctctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaaggaagagaaagaaataaagcttattcaattaggaaaagaggaagtcaaattgtctctgtttgcagatgacatgatcgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaatagtagaaaaacagagagccaaatcatgagtgaattcccactcacaattgctactaagagaataaaatacctaagaatacaacttacaagggatgtgaagtatctgttcaaggagaactgcaaacctctactcaagg s panTro5.chr21 3725838 646 + 33445071 atacacaaatcaataaacgtaatccatcatataaacagaaccaataatgaaaacc-acatgattatctcaacagatgcagaaaaggccttcaacaaaattcagcaccccttcaagctaaaaactctcaataaactaggtatcaatggaatgtatctcaaaataataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgccctctctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaaggaagagaaagaaataaagcgtattcaattaggaaaagaggaagtcaaattgtctctgtttgcagatgacatgatcgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaatttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaatagtagaaaaacagagagccaaatcatgagtgaattcccactcacaattgctactacgagaataaaatacctaagaatacaacttacaagggatgtgaagtatctgttcaaggagaactgcaaacctctactcaagg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17351659 642 + 46275980 atacacaaatcaataaacgtaatccatcatataaacagaaccaataatgaaaacc-acatgattatctcaacagatgcagaaaaggccttcaacaaaattcagcaccccttcaagctaaaaactctcaataaactaggtatcaatggaatgtatctcaaaataataagagctatttatgacaaacccacagccagtaacatactaaatgggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgccctctctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaaggaag----agaaataaagcgtattcaattaggaaaagaggaagtcaaattgtctctgtttgcagatgacatgatcgtatatttagaaaaccccatcatctcagcccaaaatctccttaagctgataagcaatttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaatagtagaaaaacagagagccaaatcatgagtgaattcccactcacaattgctactaagagaataaaatacctaagaatacaacttacaagggatgtgaagtatctgttcaaggagaactgcaaacctctactcaagg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3291054 645 - 13858734 atacacaaatcaataaacgtaatccatcatataaacaggaccgataatgaaaacc-acataattatctcaatagatgcagaaaaggccttcaacaaaattcaacaccccttcaagctaaaagctctcaataaactaggtatcagtggaatgtatctcaaaataataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgccctctctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaagcaagagaaagaaataaagcgtattcaattaggaaaagaggaagtcaaattgtctctgtttgcagatgacatgatcgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaa-agtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctactaagagaataaaatacctaagaatacaacttacaagggatgtgaaggatctgttcaaggagaactgcaaacctctgctcaagg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4474187 623 + 32716333 atacacaaatcaataaatgtaatccatcacataaacagaaccaataacgaaaacc-acatgattatctcaatagatgcagaaaaggccttccacaaaattcaacaccccttcaggctaaaaactctcaataaactaggtatcaatggaatgtatctcaaaataataagagctatttatgacaaacccacagccaataacatactaaataggcaaaatttggaagcattccctttcaaaaccagcacaaggcaagtatgctctctgtcaccattcctactcaacatagtattggaagtgctggccagggtaataaagcaaaggaaagaaataaagggtattcaattaggaaaagaggaagtcaagttgtctctgtttgcagatgacatgattgtatatttagaaaa-----------------------tatacaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtccaaaaatcacaagcatccctatacaccaagagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctactaagagaataaaatacctaagaatacaacttacaagggatgtgaaggatctgttccaggagaactacaaacctctgctcaagg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155429190 646 - 185818997 atacacaaatcaataaacgtaatccatcacataaacagaatgaataacgaaaacc-acacgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaccccttcaggctaaaaactctcaataaactaggaatcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaaccaggaagcgttccctttcaaaaccagcacaaggcaagaatgccctttctcaccattcctagtcaacatagtattggaagtgctggccagggcaatcaggcaagaggaagaaataaagcgtattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacgtgattgtatacttagaaaaccccatcgtttcagcccaaaatctccttaagctgataaacaccttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattccgatacaccaacagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgaaggacctcttcaaggagaacaacaaaccactgttcaagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162253507 646 - 192294377 atacacaaatcaataaacgtaatccatcacataaacagaatgaataacgaaaacc-acacgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaccccttcaggctaaaaactctcaataaactaggtatcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaaccaggaagcgttccctttcaaaaccagcacaaggcaagaatgccctttctcaccattcctagtcaacatagtattggaagtgctggccagggcaatcaggcaagaggaagaaataaagcgtattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacgtgattgtatacttagaaaaccccatcgtttcagcccaaaatctccttaagctgataaacaccttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattccgatacaccaatagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgaaggacctcttcaaggagaactacaaaccactgttcaagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8734506 646 + 9440265 atacacaaatcaataaacgtaatccatcacataaacagaatgaataacgaaaacc-acacgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaccccttcaggctaaaaactctcaataaactaggtgtcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaaccaggaagcgttccctttcaaaaccagcacaaggcaagaatgccctttctcaccattcctagtcaacatagtattggaagtgctggccagggcaatcaggcaagaggaagaaataaagcgtattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacgtgattgtatacttagaaaaccccatcgtttcagcccaaaatctccttaagctgataaacaccttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattccgatacaccaatagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgaaggacctcttcaaggagaactacaaaccactgttcaagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8463932 646 + 21915920 atacacaaatcaataaacgtaatccatcacataaacagaatgaataacgaaaacc-acacgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaccccttcaggctaaaaactctccataaactaggtatcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaataggcaaaaccaggaagcgttccctttcaaaaccagcacaaggcaagaatgccctttctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaggcaagaggaagaaataaagcgtattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacatgattgtatacttagaaaaccccatcgtttcagcccgaaatctccttaagctgataaacaccttcagcaaagtcccaggatacaaaatcaatgtacaaaaatcacaagcattcctatacaccaatagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgaaggacctcttcaaggagaactacaaaccactgttcaagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15038779 646 - 90373283 atacacaaatcaataaacgtaatccatcacataaacagaatgaataaccaaaacc-acacgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaccccttcaggctaaaaactctcaataaactaggtatcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaaccaggaagtgttccctttcaaaaccagcacaaggcaagaatgccctttctcaccattcctactcaacatagtattggaagtgctggccagggcaatcaggcaagaggaagaaataaagcgtattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgacatgattgtatacttagaaaaccccatcgtttcagcccaaaatctccttaagctgataaacaccttcagcaaagtctcagcatacaaaatcaatgtccaaaaatcacaagcattcctatacaccaatagtagaaaaacagagagtcaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgaaggacctcttcaagaagaactacaaaccactgttcaagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2218184 646 + 4234846 atacacaaatcaataaacgtaatccatcacataaacagaatgaataacgaaaacc-acacgattatctcaatagatgaagaaaagacctttgacaaaattcaataccccttcaggctaaaaactctcaataaactaggtatcaatagaatgtatctcaaaatgataagagctatttatgacaaacccacagccaataacatactaaatgggcaaaaccaggaagcgtcccctttcaaaaccagcacaaggcaagaatgccctttctcaccattcctactcaacatagtattggaagtgccggccagggcaatcaggcaagaggaagaaataaagcatattcaaataggaagagaggaagtcaaattgtctctgtttgcagatgaaatgattgtatacttagaaaaccccatcgtttcagcccaaaatctccttaagctgataaacaccttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcctatacaccaatagtagaaaaacagagagccaaatcatgagtgaactcccactcacaattgctacaaagagaataaaatacctaagaatacaacttacaagtgatgtgtaggacctcttcaaggagaactacaaaccactgttcaagg i manLeu1.NW_012102865v1 C 0 C 0 s cebCap1.NW_016107322v1 9616484 646 - 14377064 atacacaaatcaataaacataatccatcacataaacagaaccaatgacaaaaaccaatataattatctcaatagatgcagaaaagcccttcaacaacattccacagcctgccatgctaaaaactcttcataaacaaagtattgatgaaacgtatctcaaaataataagagttattggtgacaaacccacagtcaatatcatactgaatggacaaaagctggaagcattccctttgaaaaccggcacaagacaaggatgccctttctcaccattgctatttaacatagtattggaagttctagccagggcagtcagggaagagaaagaaataaaaggtattcaatttggaaaagaggaagt-aaattgtctctgcttgcagatgacatgattgtatgtttagaaaactccatcgtctcagtccaaaatctccttaagctgataagcaacttctgcaaagtctcaggatacaaaatcaatgtaaaaaaatcacaagcattcctatacacaaataatagacaaacagagagccaaatcatgtgtgaacttccattcacaattgctacaaagagaataaaatacctaggaagacaacttacaaggtatatgaagaaactcttcaagaagaactacaaaccacagctcaagg i cebCap1.NW_016107322v1 I 1797 C 0 s aotNan1.NW_018487195v1 8754168 640 + 9889416 atacacaaatcaataaacataatccatcacataaacagaaccaatgacaaaaactaacataattatctcaatagatgcagaaaagtccttcaacaacattccacagactgtcatgctaaaaactcttcataaacaaagtattgatgaaatatatctcaaaat-ataagagttatttatgacaagcccacagccaatatcatactgaatggacaaaagctggaggcattcccttttaaaaccagc-----ataaggatgccctttctcaccactgctatttaa-atagtattggaagttctagccagagcagtcagagaagagaaagaaataaagggtattcaatttggaaaagaggaagtcaaattgtctctgcttgcagatgacatgattgtatgtttagaaaaccccattgtctcagtccaaaatctccttaagctgataagcaacttctgcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcctatacaccaataatagacaaacagagagccaaatcatgtgtgaactcctattcacaattgctacaaagagaataaaatacctagaaagacaacttacaagggatatgaagaaactcttcaaggagaactacaaaccacagctcaagg i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e saiBol1.JH378168 5039557 30 + 13128814 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=1563326.000000 s hg38.chr21_KI270874v1_alt 101265 221 + 166743 aaataagagaggacacaaacaaatgaaaaaatattttatactcatggataggaagacttaatatcttgaaaatggctgtactgcccaaaacaatttatagattcaatactgtccccatcaagctaccactgactttctttacagaattagaaaaaaaactactttaaatttcatatagaaccaaaaaagagcctgtatagccaagacaatcctaagcaaaa s panTro5.chr21 3726484 219 + 33445071 aaataagagaggacacaaacaaatgaaaaaatattttatactcatggataggaagacttaatatcttgaaaatggctgtactgcccaaaacaatttatagattcaatactatccccatcaagctaccactgactttctttacagaattat--aaaaaactactttaaatttcatatagaaccaaaaaagagcctgtatagccaagacaatcctaagcaaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17352301 219 + 46275980 aaataagagaggacacaaacaaatgaaaaaatattttatactcatggataggaagacttaatatcttgaaaatggctgtactgcccaaaacaatttatagattcaatactatccccatcaagctaccactgactttctttacagaattat--aaaaaactactttaaatttcatatagaaccaaaaaagagcctgtatagccaagacaatcctaagcaaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3291699 219 - 13858734 aaataagagaggacacaaacaaatgaaaaaatattttatactcatggataggaagaatcaatatcttgaaaatggccatactgcccaaagcaatctgtagattcaatactgtccccatcaagctaccactgactttctttacagaattag--aaaaaactactttaaatttcagatagaaccagaaaagagcctgtatagccaagacaatcctaagcaaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4474810 211 + 32716333 aaataagagaggacacaaacaaatgaaaaaacattttatactcatggataggaagaatcaatatcttgaaaattgccatactgcccaaagcaatttttagattcaatactatccccatcaagctaccactgactttctttacagaattag-aaaaaaattactttacatttcatatagcaccaaaaaag---------agccaagacaatcctaagcaaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155429836 219 - 185818997 aaataagagaggacacaaacaaatgaaaaaacatttcatactcatggacaggaagaatcaatatcatgaaaatggccatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgactttcttcacagaattag--aaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162254153 219 - 192294377 aaataagagaggacacaaacaaatgaaaaaacatttcatactcatggacaggaagaatcaatatcatgaaaatggccatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgactttcttcacagaattag--aaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8735152 220 + 9440265 aaataagagaggacacaaacaaatgaaaaagcatttcatactcatggacaggaagaatcaatatcatgaaaatggccatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgacgttcttcacagaattag-aaaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8464578 219 + 21915920 aaataagagaggacacaaacaaatgaaaaaacatttcatactcatggataggaagaatcaatatcatgaaaatggccatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgactttcttcacagaattag--aaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15039425 219 - 90373283 aaataagagaggacacaaacaaatgaaaaaacatttcatactcatggataggaagaatcaatatcatgaaaatggtcatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgactttcttcacagaattag--aaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2218830 219 + 4234846 aaataagagaggacacaaacaaatgaaaaaacatttcatactcatggataggaagaatcaatatcatgaaaatggccatactgcccaaagcaatttatagattcaatactatccccatcaagctataattgactttcttcacagaattag--aaaaaactattttaaatgtcatatggaaccaaaaaatagcccatatagccaagacaatcctaagcaaaa i manLeu1.NW_012102865v1 C 0 C 0 s saiBol1.JH378168 5039587 213 + 13128814 aaataagagaggacacaaacaaatggaaaaacacttcatgttcatgaataagaagaatcaatattatgaaaatgaccatgctgcccaaagtaatttatagattcaa-----tctccatcaagttaccattgatcttcttcacagaatcag--aaaaaactactttaaatttcatatggaaccaaaaaa-agcccatatagccaaggcaatcctaagtaaaa i saiBol1.JH378168 I 30 C 0 s cebCap1.NW_016107322v1 9617130 212 - 14377064 aaataagagaggacacaaacaaatgg-aaaacactccatgttcatggataagaagaatcaatatcatgaaaatgaccatgctgcccaaagtaatttatagattcaa-----tctccatc-agttaccattgactttcttcacagaatcag--aaaaaactactttaaatttcatatggaaccaaaaaagagcccatatagccaagacaatcctaagcaaaa i cebCap1.NW_016107322v1 C 0 I 46 s aotNan1.NW_018487195v1 8754808 214 + 9889416 aaattagagaggacacaaacaaatggaaatacactccatgttcatggataagaagaatcaatatcatgaaaatgaccatgctgcccaaagtaatttatagattcaa-----tctccatcaagttaccattgaccttcttcacagaatcag--aaaaaactactttaaatttcatatggaaccaaaaaggagcccgtatagccaagacaatcctaagcaaaa i aotNan1.NW_018487195v1 C 0 I 46 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=188494.000000 s hg38.chr21_KI270874v1_alt 101486 38 + 166743 gaaaacaaaggtggagccatcatggtacctgacttcaa s panTro5.chr21 3726703 38 + 33445071 gaaaacaaaggtggagccatcatggtacctgacttcaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17352520 38 + 46275980 gaaaacaaaggtggagccatcatggtacctgacttcaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3291918 38 - 13858734 gaaaacaaaggtggagccatcatggtacctgacttcaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4475021 38 + 32716333 gaaaacaagggtggagccatcatggtacctgacttcaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155430055 37 - 185818997 gaaaacaaa-gtggagccatcacagtacctgacttcaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162254372 37 - 192294377 gaaaacaaa-gtggagccatcacagtacctgacttcaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8735372 37 + 9440265 gaaaacaaa-gtggagccatcacagtacctgacttcaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8464797 38 + 21915920 gaaaacaaaggtgaagccatcacagtacctgacttcaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15039644 38 - 90373283 gaaaacaaaggtggagccatcacagtacctgacttcaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2219049 38 + 4234846 gaaaacaaaggtgaagccatcacagtacctgacttcaa i manLeu1.NW_012102865v1 C 0 C 0 s saiBol1.JH378168 5039800 35 + 13128814 -agaacaaagctcag--catcacattacctgactctaa i saiBol1.JH378168 C 0 I 11 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e aotNan1.NW_018487195v1 8755022 46 + 9889416 I e cebCap1.NW_016107322v1 9617342 46 - 14377064 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=2198416.000000 s hg38.chr21_KI270874v1_alt 101524 303 + 166743 actatactacaaggctacagtaaccaaaacagcatggtactgttaccaaaacagatatatagactgatggaacagaacagagccctcaggaataatgccacacatctacaaccatcagatctttgataaccctgacaaaaataagcaatggggaaaggatcccctatttaataaatggcattgggaaaactggctagccatatacaggaaactgaaactggacctcttccttac------------accttatacaaaaattaactcaagttggattaaagacttaaatgtaagacc--aaaaaccataaaaactct s panTro5.chr21 3726741 303 + 33445071 actatactacaaggatacagtaaccaaaacagcatggtactgttaccaaaacagatatatagactgatggaacagaacagagccctcaggaataatgccacacatctacaaccatcagatctttgataaccctgacaaaaataagcaatggggaaaggatcccctatttaataaatggcattgggaaaactggctagccatatacaggaaactgaaactggacctcttccttac------------accttatacaaaaattaactcaagttggattaaagacttaaatgtaagacc--aaaaaccataaaaactct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17352558 303 + 46275980 actatactacaagtatacagtaaccaaaacagcatggtactgttaccaaaacagatatatagactgatggaacagaacagagccctcaggaataatgccacacatctacaaccatcagatctttgataaccctgacaaaaacaagcaatggggaaaggatcccctatttaataaatggcattgggaaaactggctagccatatacaggaaactgaaactggacctcttccttac------------accttatacaaaaattaactcaagttggattaaagacttaaatgtaagacc--aaaaaccataaaaactct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3291956 303 - 13858734 actatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagatatatagactgatggaacagaacagaggcctcaggaataatgccacacatctacaaccatcagatctttgataaccctgacaaaaataagcaatgggcaaaggatcccctatttaataaatggcattgggaaaactggctagccatatacaggaaactaaaactggacctcttccttac------------accttatacaaaaattaactcaagttggattaaagacttaaatgtaagacc--aaaaaccataaaaactct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4475059 305 + 32716333 actatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagatatatagactgatggaacagaacagagtcctcaggaataacaccacacatctacaaccgtcggatctttgacaaccctgacaaaaacaagcaatggggaaaggatcccctatttaataaatggcattgggaaaactggctagccatatgcaggaaactgaaactggacctcttccttac------------accttatacaaaaattaactcaagttggattaaagacttaaatgtaagacctaaaaaaccataaaaactct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155430092 303 - 185818997 actctactacaaggctacagcaaccaaaacagcatggtactggtaccaaaacagatatagagactggtggaacagaacagaggtctcagggataatgccacacatctacaaccattggatctttgacaaatgtaatgaaaacaagcaattgggaaaggatcccctatttaataaatggcattgggaaaactggctagccacatgcaggaaactgaaactggaccttttccttac------------accttatacaaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162254409 303 - 192294377 actctactacaaggctacagcaaccaaaacagcatggtactggtaccaaaacagatatagagactggtggaacagaacagaggtctcagggataatgccacacatctacaaccattggatctttgacaaatgtaatgaaaacaagcaattgggaaaggatcccctatttaataaatggcattgggaaaactggctagccacatgcaggaaactgaaactggaccttttccttac------------accttatacaaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8735409 303 + 9440265 actctactacaaggctacagcaaccaaaacagcatggtactggtaccaaaacagatatagagactggtggaacagaacagaggtctcagggataatgccacacatctacaaccattggatctttgacaaatgtaatgaaaacaagcaattgggaaaggatcccctatttaataaatggcattgggaaaactgactagccacatgcaggaaactgaaactggaccttttccttac------------accttatacaaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8464835 303 + 21915920 actctactacaaggctacagcaaccaaaacagcatggtactggtaccaaaacagatatagagactggcggaacagaacagaggcctcagggataatgccacacatctacaaccattggatctttgacaaatgtaatgaaaacaagcaattgggaaaggatcccctatttaataaatggcattgggaaaactggctagccacatgcaggaaactgaaactggaccttttccttac------------accttatacaaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15039682 303 - 90373283 actctactacaaggctacagcaaccaaaacagcatggtactggtaccaaaacagatatagagactggcggaacagaacagaggcctcagggataatgccacacatctacaaccattggatctttgacaaatgtaatgaaaacaagcaattgggaaaggataccctatttaataaatggcattgggaaaactggctagccacaggcaggaaactgaaactggaccttttccttac------------accttatacaaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2219087 303 + 4234846 actctactacaaggctacagcaaccaaaacagcatggtaccggtaccaaaacagatatagagactggcggaacagaacagaggcctcagggataatgccacacatctacaaccattggatcttcgacaaatgtaatgaaaacaagcaattgggaaaggatcctctatttaataaatggcattgggaaaactggctagccacatgcaggaaactgaaactggaccttttccttac------------accttatataaaaattaactcaagatggattaaagacttaaatgtaagacc--taaaaccatagaaactct i manLeu1.NW_012102865v1 C 0 C 0 s saiBol1.JH378168 5039846 310 + 13128814 actatactacaaggctatagcaaccaaaac-gcatggtactgatagcaaaacagatatatagaccaattgaacaaaaccgaggcctcagaaataatgccacgtatttacaaccatctgatctttgacaaacctgagag----aagcaatgggaaaaggatttactatttaataaatggtgttgggaaaactggctagccatatgcagaaaactaaaactggaccccttctttaccccttcttttgtaccatatacaaaaattcactcaagatagattaaaaacttaaatgtaagacc--taagaccataaaaaccct i saiBol1.JH378168 I 11 C 0 s cebCap1.NW_016107322v1 9617388 299 - 14377064 actatactacaagggtatagcaaccaaaacagcatggtactggtaccaaaacagatatatagaccaactgaacaaaactgaggtctcagaaataatgccacacatttacaaccaactgatctttgacaaatctgacag----aagcaatgggaaaaggatttactatttaataaatggtgttgggaaaactggctagccatatgcagaaaactaaaactgaaccccttctttac------------accatatacaaaaattcactcaagatagattaaaaacttaaatgtaagacc--taagaccataaaaaccct i cebCap1.NW_016107322v1 I 46 C 0 s aotNan1.NW_018487195v1 8755068 299 + 9889416 actatactacaaggctatagcaaccaaaacagcatggtactgataccaaaacagatatatagaccaattgaacaaaaccgaggcctcagaaataatgccacacatttacaaccatctgatctttgacaaacctgacag----aagcaatgggaaaaggatttactatttaataaatggtattgggaaaactagctagccatatgcagaaaactaaaactggaccccttctttac------------accatatacaaaaattcactcaagatagattaaaaacttaaatgtaagacc--taagaccataaaaactct i aotNan1.NW_018487195v1 I 46 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e calJac3.chr21 21936366 2256 + 50472720 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=3870338.000000 s hg38.chr21_KI270874v1_alt 101827 485 + 166743 agaagaaaacctaggcaatgccattcaggacataggcatgggcaaa-acttcatgactaaaacaccaaaaacaatagcaacaaaagccaaaattgacaaatgggatctaattaaactaaacagcttctacacagcaaaagaaactatcatcagagtgaacagacaacctacagaatagaagaaaatgtttgcaatctatccatct-gacaaagggttaatatccagaatttacaaggagcttaaacaaatttacaag-aaaaaa-----acaaccccctcaaaaagtgagtgaaagatatgaacaaacacttctc-aaaagaagacatttatgtgaccaacaaacat--att------taaaaaaagcttatcatcactgg----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaatgct s panTro5.chr21 3727044 485 + 33445071 agaagaaaacctaggcaatgccattcaggacataggcatgggcaaa-acttcatgactaaaacacaaaaagcaatagcaacaaaagccaaaattgacaaatgggatctaattaaactaaacagcttctacacagcaaaagaaactatcatcagagtgaacagacaacctacagaatagaagaaaatgtttgcaatctatccatct-gacaaacggttaatatccagaatttacaaggatcttaaacaaattcacaag-aaaaaa-----acaaccccctcaaaaagtgagtgaaagatatgaacaaacacttctc-aaaagaagacatttatgtgaccaacaaacat--att------taaaaaaagcttatcatcactgg----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaatgct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17352861 486 + 46275980 agaagaaaacctaggcaatgccattcaggacataggcatgggcaaa-acttcatgactaaaacacaaaaagcaatagcaacaaaagccaaaattgacaaatgggatctaattaaactaaacagcttctacacagcaaaagaaactatcatcagagtgaacagacaacctacagaatagaagaaaatgtttgcaatctatccatct-gacaaacggttaatatccagaatttacaaggatcttaaacaaattcacaagaaaaaaa-----acaaccccctcaaaaagtgagtgaaagatatgaacaaacacttctc-aaaagaagacatttatgtgaccaacaaacat--att------taaaaaaagcttatcatcactgg----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaatgct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3292259 485 - 13858734 agaagaaaacctaggcaatgccattcaggacataggcatgggcaaa-acttcatgactaaaacacc-aaagcaatagcaacaaaagccaaaattgacaaatgggatctaattaaactaaacagcttctacacagcaaaagaaactatcatcagagtgaacagacaacctacagaatagaagaaaatgtttgcaatctatccattt-gacaaagggttaatatccagaatttacaaggagcttaaacaaatttacaag-aaaaaa-----acaaccccctcaaaaagtgagtgaaagatatgaacaaacacttctc-aaaagaagacatctatgtgaccaacaaacataaaaa------aaaaaaaagcttaccatcactgg----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatctcacaccagttagaatggtgatcatt-aaaagtcaggaagcaacagatgctggagaggatgtggagaaataggaatgct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4475364 482 + 32716333 agaagaaaacctaggcaatgccattcaggacataggcatgggcaaagacttcatgactaaaacatcaaaagcaatagcaacaaaagccaagattgacaaatgggatctaattaaactaaagagcttctacacagcaaaagaaactatcatcagagtgaacagacaacctacagaataggagaaaatatttgcaatctagccatct-gacaaagggttaatatccagaatttacaaggagcttaaacaaatttacaag-aaaaaa-----acaa-cccctcaaaaagtgagtgaaagatataaacaaacgcttctc-aaaagaagacatttatgtggccaacaaacat--a---------aaaaaacgcttatcatcactgg----tcattagagaaatgcaaatcaaaa-ccacaatgggataccatctcacaccagttagcatggcaatcattaaaaagtcaggaaacaacagatgctggagaagatatggagaaataggaatact i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155430395 484 - 185818997 agaagaaaacctaggcaatgtcattcagcacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagacaacctacagaatgggagaaattttttgcaatctatccatct-gacaaagggctaatatccagaatttacaaagagcttaaacaaatttacaag--aaaaa-----acaaccccctcaaaaagtgagcaaaagatatgaacaaacacttctc-aaaaaaagacatttatgtggccaacaaacat--att------taaaaaa-gcttatcatcaccaa----tcattagagaaatgtaaatcaaaa-ccacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaagatgaggagaaataggaatgct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162254712 484 - 192294377 agaagaaaacctaggcaatgtcattcagcacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagacaacctacagaatgggagaaattttttgcaatctatccatct-gacaaagggctaatatccagaatttacaaagagcttaaacaaatttacaag--aaaaa-----acaaccccctcaaaaagtgagcaaaagatatgaacaaacacttctc-aaaaaaagacatttatgtggccaacaaacat--att------ttaaaaa-gcttatcatcaccaa----tcattagagaaatgtaaatcaaaa-ccacaatgagatatcatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaagatgaggagaaataggaatgct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8735712 484 + 9440265 agaagaaaacctaggcaatgtcattcagcacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagacaacctacagaatgggagaaattttttgcaatctatccatct-gacaaagggctaatatccagaatttacaaagagcttaaacaaatttacaag--aaaaa-----acaaccccctcaaaaagtgagcaaaagatatgaacaaacacttctc-aaaaaaagacatttatgtggccaacaaacat--att------ttaaaaa-gcttatcatcaccaa----tcattagagaaatgtaaatcaaaa-ccacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaatgct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8465138 484 + 21915920 agaagaaaacctaggcaatgtcattcagcacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatagcaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaaatttttgcaatctacccatct-gacaaaggtctaatatccagaatctacaagaaacttaaacaaatttacaag--aaaaa-----acaaccccctcaaaaagtaagcaaaagatatgaacaaacacttctc-aaaaaaagacatttatgtggccaacaaacat--att------ttaaaaa-gcttatcatcaccaa----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatatcacaccagttagaatggtgatcaataaaaagtcaggaaacaacagatgctggagaagatgaggagaaataggaatgct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15039985 484 - 90373283 agaagaaaacctaggcaatgtcattcaggacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatagtaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaattttttgcaatctatccatat-gacaaagggctaatatccagaatttacaaagagcttaaacaaatttacaag--aaaaa-----acaacc-cctcaaaaagtgagcaaaagatatgaacaaacacttctcaaaaaaaagacatttatgtggccaacaaacat--att------ttaaaaa-gcttatcatcaccaa----tctttagagaaatgcaaatcaaaa-ccacaacgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaagaggaggagaaataggaatgct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2219390 484 + 4234846 agaagaaaacctaggcaatgtcattcagcacataggcatgggcaaagacttcatgactaaaacaccaaaagcaatagcaacaaaagtcaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtgaacagacaacctacagaatgggagaaattttttgcaatctatccatct-gacaaagggctaatatccagaatttacaaagagcttaaacaaatttacaag--aaaaa-----acaacctcctcaaaaagtgagcaaaggatatgaacaaacacttctc-aaaaaaagacatttatgtggccaacaaacat--att------taaaaaa-gcttatcatcaccaa----tcattagagaaatgcaaatcaaaa-ccacaatgagataccatatcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaagatgaggagaaataggaatgct i manLeu1.NW_012102865v1 C 0 M 518 s calJac3.chr21 21938622 492 + 50472720 agaaaaaaacctaggcaataccattcaggatataggcatgggcaaggacttcatgactaaaataccaaaagcaacggcaac-aaatccaaaattgacaaatcggatctaattaaactaaagagcttctgcaaagcaaaagaaactgtcatccgagtgaacaggcaacctacagaatggaagaacatctttgcaatctatccatctaaacaaagggctaatatcccgaatctacaaggaacttaaacaaatttacaag--aaaaaaactgacaaccccatc-aaaattaggcaaaagatataaatagacatttctc-aaaagaagacatctatgccaccaacaaactt--ttt----tttttaaat-gttcattatcactgatgattaattagagaaatgcaaatcaaaacccacaatgtggtaccatctcatgccagttagaatggcgatcattaaaaagtcagga---aacagatgctggagagaatgtggagaaataggaacact i calJac3.chr21 I 2256 C 0 s saiBol1.JH378168 5040156 493 + 13128814 agaaaaaaaactaggcaataccattcaggacataggcatgggcaaggacttcatgactaaaataccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatccaagtgaacaggccacctacggaatggaagaacatctttgcaatctatccatctaaacaaaggactaatatccctaatctacaaggaactt----aaatttacaag--aaaaaaacagacaaccccatcaaaaattaggcaaaagatatcaacagacatttctc-aaaagatgacatctatgccaccaacaaacat--att-aaaaaaaaaaaa-gcacattatcactggagattaattagaaaaatacaaatcaaaacccacaatgagataccatctcatgccagttagaatggcagtcattaaaaagtcagga---aacagaccctggagagaatgtggagaaataggaacact i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9617687 493 - 14377064 -agaaaaaacttaggcaataccattcaggacgtaggcatgggcaaggacttcatgactgaaatgccaaaagcaacggcaacaaaagccaaaattgac-aatggtttctaattaaactaaagagcttctgcacagcaaaagaaactatcatccaagtgaacaagcaacctacagaatggaagaatatctttgcaatctatccatctaaacaaagtgttaatatacagaatctacaaggaacttaaacaaatttacaag--aaaaaaacagacaaccccatcaaaaattaggcaaaagatataaacagatatttctc-aaaagaagacatctatgccaccaacaaatat--att---ttttttaaat-gttcattatcactggtgattaattagagaaatgcaaatcaaaacccacaatgagataccatctcatgccagttagaatggcaatcattaaaaagtcagga---aacagatgctggagagaatgtggagaaataggaacact i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8755367 493 + 9889416 -agaaaaatcctaggcaataccattcaggacataggcatgggcaaggacttcatgactaaaataccaaaagcaacggcaacaaaagccaaaattgacaaatgagatctaattaaactaaagaccttctgcacagcaaaagaaactatcatccgagtgaacaggcaatctacagaatggaagaacatctttgcaatctatccatctaaacaaagggctaatatcccaaatctacaaggaacttaaacaaatttacaag--aaaaaaacagacaaccccatcaaaaattaggcaaaagatataaacagatatttctc-aaaagaagacatctatgccactaaca----t--attaaaaaaaaaaaaa-gctcattatcactggtgattaattagagaaatgcaaatcaaaacccacaatgagataccatctcatgccagttagaatggcgatcattaaaaagtcagta---aacagatgctggagaaaatgtggagaaataggaacact i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I a score=3783238.000000 s hg38.chr21_KI270874v1_alt 102312 537 + 166743 tttacactgttttcccaccactgttggtgggagtgtaaattagttcaaccattgtgcaatacagtgtggcgattcctcaaggatctagaaccagaaataccatctgacc---------------------------------------------------------------------------------cagcaatcccattactgggtatatacccaaaagattataaatcattctaccataaagacacatgcacacacatgtttactgcagcactgttcacaatagcaaatatttggaaccaacacaaatgcccatcaatgatagactggat-aaaggaaatgtggcacatataaactatggaatactatgcagccataaaaccaggatgagttcatgtcctttgcagggacatggatgaagcttgataccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagctgaacaatgagaacacatggacacagggaggggaacatcacacaccggggcctgtcagggggtggggcgctaggggacggatagcactaagagaaatacctaacatagattatggc s panTro5.chr21 3727529 537 + 33445071 tttacactgttttcccaccactgttggtgggagtgtaaattagttcaaccattgtggaatacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacc---------------------------------------------------------------------------------cagcaatcccattactgggtatatacccaaaagattataaatcattctaccataaagacacatgcacacatatgtttattgcagcactgttcacaatagcaaatatttggaaccaacacaaatgcccatcaatgatagactggat-aaaggaaatgtggcacatataaactatggaatactatgcagccataaaaccaggatgagttcatgtcctttgcagggacatggatgaagctggataccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcacacacctgggcttgtcagggggtggggcgctaggggagggatagcactaggagaaatacctaacatagattatggc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17353347 537 + 46275980 tttacactgttttcccaccactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacc---------------------------------------------------------------------------------cagcaatcccattactgggtatatacccaaaagattataaatcattctaccataaagacacatgcacacatatgtttattgcagcactgttcacaatagcaaatatttggaaccaacacaaatgcccatcaatgatagactggat-aaaggaaatgtggcacatataaactatggaatactatgcagccataaaaccaggatgagttcatgtcctttgcagggacatggatgaagctggataccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcacacacctgggcttgtcagggggtggggcgctaggggagggatagcactaggagaaatacctaacatagattatggc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3292744 536 - 13858734 tttacactgttttcccaccactgttggtgggagtgtaaattagttcaaccattgtggaatacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacc---------------------------------------------------------------------------------cagcaatcccattactgggtatatacccaaaagattataaatcattctactataaagacatatgcacacatatgtttattgcagcactgttcacaatagcaaatatttggaaccaacacaaatgcccatcaatgatagactggat-aaaggaaatgtggcacatataaactatggaatactatgcagccataaaacaaggatgagttcatgttctttgcagggacatggatgaagctggataccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatgttctcactcataagtgggagttgaacaatgagaaaacatggacacagggaggggaacatcacacaccggggcctgtca-ggggtggggcgctaggggagggatagcactaggagaaatacctaatatggattatggc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4475846 523 + 32716333 ttta--------------cactgttggtgggagtgtaaattagttccaccattgtgtaatacagtgtggcaattcctcaaggatctagaaccagaaataccatttgacc---------------------------------------------------------------------------------cagcaatcccattactgggtatatacccaaaagattataaatcattcttctataaagacacatgcacacgtatgtttattgcagcactgttcacaatagcaaatatttggaaccaacccaaatgcccatcaatgatagactggataaaaggaaatgtggcacatatacactatggaatactacgcagccataaaa-aatgatgagttcatgtcctttgcagggacatggatgaagctggataccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcatacacagaggcctgtcagggggtggggtgctaggggagggatagcattaggagaaatacctaatatagattatggc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155430879 521 - 185818997 ttta--------------cactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcaattcctcaaggatctagaaccagaaataccatttgaca---------------------------------------------------------------------------------aagcaatcccattacggggtatatacccaaaagattataaatcgttctactataaagacacaggcacatgtatgtttattacagcactgttcacaatagcaaatatttggaaccaacccaaatgctcatcaatgatagactggat-aaaggaaatatggcacatatacaccatggaatattatgcagccataaaacaaggat--gtttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcagtcataagtgggagttgaacaatgagaacatatggacacagggaagggaacatcacacaccagggcctgtcagggagtggggcactaggggagggatagaattaggagaaatacctaatatagattatggc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162255196 521 - 192294377 ttta--------------cactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcaattcctcaaggatctagaaccagaaataccatttgaca---------------------------------------------------------------------------------aagcaatcccattacggggtatatacccaaaagattataaatcattctactataaagacacaggcacatgtatgtttattacagcactgttcacaatagcaaatatttggaaccaacccacatgctcatcaatgatagactggat-aaaggaaatatggcacatatacaccatggaatattatgcagccataaaacaaggat--gtttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcagtcataagtgggagttgaacaatgagaacatatggacacagggaagggaacatcacacaccagggcctgtcagggggtggggcactaggggagggatagaattaggagaaatacctaatatagattatggc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8736196 521 + 9440265 ttta--------------cactgttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggcaattcctcaaggatctagaaccagaaataccatttgaca---------------------------------------------------------------------------------aagcaatcccattacggggtatatacccaaaagattataaatcattctactataaagacacaggcacatgtatgtttattacagcactgttcacaatagcaaatatttggaaccaacccaaatgctcatcaatgatagactggat-aaaggaaatatggcacatatacaccatggaatattatgcagccataaaacaaggat--gtttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcagtcataagtgggagttgaacaatgagaacatatggacacagggaagggaacatcacacaccagggcctgtcagggggtggggcactaggggagggatagaattaggagaaatacctaatatagattatggc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8465622 521 + 21915920 ttta--------------cactgttggtgggagtgtaaattagttcaaccattgtggaatacagtgtggcaattcctcaaggatctagaaccagaaataccatttgaca---------------------------------------------------------------------------------aagcaatcccattactgggtatatacccaaaagattataaatcattctactataaagacacaggcacatgtatgtttattacagcactgttcacaatagcaaatatttggaaccaacccaaatgcgcatcaatgatagactggat-aaaggaaatatggcacatatacaccatggaatattatgcagccataaaacaaggat--gtttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcagtcataagtgggagttgaacaatgagaacatatggacacagggaagggaacatcacacaccagggcctgtcagggggtggggcactaggggagggatagaattaggagaaatacctaatatagattatggc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15040469 521 - 90373283 ttta--------------cactgttggtgggagtgtaaattagttcaaccattgtggaatacagtgtggcaattcctcaaggatctagaaccagaaataccatttgaca---------------------------------------------------------------------------------aagcaatcccattactgggtatatacccaaaagattataaatcattctactataaagacacaggcacatgtatgtttattacagcactgttcacaatagcaaatatttggaaccaacccaaatgctcatcaatgatagactggat-aaaggaaatatggcacatatacaccatggaatattatgcagccataaaacaaggat--gtttatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaactaaacactgcatattctcagtcataagtaggagttgaacaatgagaacatatggacacagggaagggaacatcacacaccagggcctgtcagggggtggggcactaggggagggatagaattaggagaaatacctaatacagattatggc i chlSab2.chr2 C 0 C 0 s calJac3.chr21 21939114 522 + 50472720 ttta--------------caatgttgatgggagtataagttagttcaaccaatgtggaagacagtgtggcaattcctcaaggatctagagctagaaatatcattcgacc---------------------------------------------------------------------------------cagcaatcccattactatgtatatacccagaggattatatatcattctcctataaagacacatgcacatgtatgtttattgcagcactattcacaatagcaaagacttggaagcaacccaaatgcccatcaatgatagactgaat-aaagaaaatgtggcacatatacaccatggaatattatgcagtcataaga-aagaatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcatcaaactaacacaggaacagaaagccaaacaccgcatgttcttgcttacaagtaggagttgaacaatgaaaatacatagacacggcaaggggaacatcacactccggggcctgtcaggtgatatggggctaggagagggataatattaggaaaaatatctaatgtcaatgatggg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5040649 600 + 13128814 ttta--------------c---gttgatgggagtgtaagttagttcaaccaacgtggaagacagtgtggcaattcctcaaggatctacagctagaaataccatttgacccagcaatcccattactgggtatatacccagcaatcccattactgggtatatacccagcaatcccattactaggtatatacccagcaatcccattactaggtatatacccagagcattatacatcattctcctataaagacacatgcacatgtatgtttattacagcactattcacaacagcaaagacttggaaccaacccaaatgcccatcaatgatagactggat-aaagaaaatgtggcacaaatacacaatggaatattatgcagtcataaga-aataatgagttcatgtcctttgcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacacctcatgttctcacttacaagtaggagttgaacaatgaaaacacatagacacaggaaggggaacatcacactctggggcctgtcaggtgatggggggctaggggagggatagcgttaggaaaaatatctaatgtcaatgatggg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9618180 521 - 14377064 ttta--------------caatgttggtgggagtataagttagttcaaccaatgtggaagacagtgtggcaatccctcaaggatctagagctagaaataccatttgacc---------------------------------------------------------------------------------cagcaatcccattactgggtgtatacccagaggattatacatcattctcctataaagacacatg-acatgtatgtttattgcagcactactcacaatagcaaagacttggaactaacccaaatgcctatcaatgatagactggat-aaagaaaatgtggcacaaatacacaatggaatattatgcagtcagaaga-aagaatgagtccatgtcctttgcagggacacggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttcttgcttacaagtaggagttgaacaatgaaaacacatagacacaggaaggggaacatcacactttggggcctgtcaggtgatggggggctaggagagggatagcattaggaaaaatatctaatgtcaatgatggg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8755860 522 + 9889416 ttta--------------cactgttggtgggagtataagttagttcaaccaatgtagaagacagtgtggcaattcctcaaggatctagagctagaaataccatttgacc---------------------------------------------------------------------------------cagcaatcccattactaggtatatacacagaggattatacatcactctcctataaagacacatgcacatgtatgtttattgcagcactattcacaatagaaaagacctggaaccaacccaaatgcccatcaatgatagactggat-aaagaaaatgtggcacaaatacacaatggaatattatgcagtcataaga-aataatgagttcatgtccttttcagggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacaccgcatgttctcacttacaagtaggagttgaacaatgaaaacacatagacacaggaaggggaacatcacactccagggcctgtcaggtgatggggggctaggagaaggatagcattaggaaaaatatctaatgtcaacgatgtg i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 218721 6078 - 13750039 I e manLeu1.NW_012102865v1 2219874 518 + 4234846 M a score=735788.000000 s hg38.chr21_KI270874v1_alt 102849 107 + 166743 ttgatgggtgcagcaaaccaccatggcacatgtatacctgtgtaacaaacttgcacattccgcacaggtacctcagaatttaaagtataataattaaaaa--------aaaaAAA------ s panTro5.chr21 3728066 107 + 33445071 ttgatgggtgcagcaaaccaccatggcacatgtatacctgtgtaacaaacttgtacattccgcacaggtacctcagaatttaaagtataataattaaaaa--------aaaaAAA------ i panTro5.chr21 C 0 C 0 s panPan2.chr21 17353884 104 + 46275980 ttgatgggtgcagcaaaccaccatggcacatgtatacctgtgtaacaaacttgtacattccgcacaggtacctcagaatttaaagtataataatt---aa--------aaaaaaa------ i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3293280 104 - 13858734 ttgatgggtgcagcaaaccatcatggcacatgtatacctgtgtaacaaacttgcacattccgcacaggtacctcagaatttaaagtataataatt---aa--------aaaaaaa------ i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4476369 100 + 32716333 ttggtgggtgcagcaaaccaccgtggcacatgtacacctgtgtaacaaacttgcacgttctgcacatgtacctcagaatttaaagtataataatt---aa--------aaa---------- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155431400 101 - 185818997 ttgatgagtgcagcaaaccaccacagcacaagtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatt---ta--------aaa---a------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162255717 101 - 192294377 ttgatgagtgcagcaaaccaccacagcacatgtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatt---ta--------aaa---a------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8736717 101 + 9440265 ttgatgagtgcagcaaaccaccacagcacatgtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatt---ta--------aaa---a------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8466143 101 + 21915920 ttgatgagtgcagcaaaccaccatggcacatgtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatt---ta--------aaa---a------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15040990 101 - 90373283 ttgatgagtgcagcaaaccactatggcacatgtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagtacaataatt---ta--------aaa---a------ i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 224799 101 - 13750039 ttgatgggtgcagcaaaccaccatggcacatgtatacctgtgtaacaaacttgcacgttctgcacatgtaccccagaatttaaagcacaataatt---ta--------aaa---a------ i colAng1.NW_012120598v1 I 6078 C 0 s calJac3.chr21 21939636 98 + 50472720 ttaatgggtgcagcaaatcaccatggcacttgtatacctatgtaacaaacccgcacattctgcacatgtatcccagaactt-----atagtaatt---tt--------aaa---aaa---- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5041249 106 + 13128814 ctaatgggtgcagcaaaccaccatggcacgtgtattcctatgtaacaaacctgcacattctgcacatgtattccagaactt-----atagtaatt---ttttttttaaaaa---aaa---- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9618701 102 - 14377064 ataatgggtgcagcaaaccactatggcacgtctatacctatttaacaaacctgcacattctgcacatgtatcccagaactt-----atagtaatt---aa--------aaa---aaaaaaa i cebCap1.NW_016107322v1 C 0 I 39 s aotNan1.NW_018487195v1 8756382 102 + 9889416 ttaatgggtgcagcaaaccaccatggcacgtgcatacctatgtaacaaacctgcatattctgcacatgtatcccagaactt-----atagtaatt---ta--------aaa---aaaaaaa i aotNan1.NW_018487195v1 C 0 I 2 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e manLeu1.NW_012102865v1 2219874 518 + 4234846 M a score=171523.000000 s hg38.chr21_KI270874v1_alt 102956 29 + 166743 ACAGAATTTCTGCAATACTATAGGTGAAG s panTro5.chr21 3728173 29 + 33445071 ACAGAATTTCTGCCCTACTATAGGTGAAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17353988 29 + 46275980 ACAGAATTTCTGCTCTACTATAGGTGAAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3293384 29 - 13858734 TCAGAATTTCTGCTCTACTATAGGTGAAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4476469 25 + 32716333 ----aaTTTCTGCTCTAGTAAAGCTGAAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155431501 29 - 185818997 aCagaatttctgctctactatagctgaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162255818 29 - 192294377 aCAGAATTTCTGCTCTACTATAGCTGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8736818 29 + 9440265 aCagaatttctgctctactatagctgaag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8466244 29 + 21915920 aCAGAATTTCTGCTCTACTATAGCTGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15041091 29 - 90373283 aCAGAATTTCTGCTCTACTATAGCTGAAG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 224900 29 - 13750039 aCAGAATTTCTGCTCTACTATAGCTGAAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21939734 26 + 50472720 aaGGACTTTCTGTTC---TATAGCTGAAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5041355 26 + 13128814 aaGGACTTTCTGTTC---TATAGCTGAAG i saiBol1.JH378168 C 0 C 0 s aotNan1.NW_018487195v1 8756486 26 + 9889416 AAGGACTTTCTGTTC---TATAGCTGAAG i aotNan1.NW_018487195v1 I 2 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761393 7 - 38779656 I e cebCap1.NW_016107322v1 9618803 39 - 14377064 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e manLeu1.NW_012102865v1 2219874 518 + 4234846 M a score=8481.000000 s hg38.chr21_KI270874v1_alt 102985 2 + 166743 AA s panTro5.chr21 3728202 2 + 33445071 AA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17354017 2 + 46275980 AA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3293413 2 - 13858734 AA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4476494 2 + 32716333 AA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155431530 2 - 185818997 ag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162255847 2 - 192294377 AG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8736847 2 + 9440265 ag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8466273 2 + 21915920 AG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15041120 2 - 90373283 AG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 224929 2 - 13750039 AG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21939760 2 + 50472720 GG i calJac3.chr21 C 0 I 25 s saiBol1.JH378168 5041381 2 + 13128814 GG i saiBol1.JH378168 C 0 I 17 s aotNan1.NW_018487195v1 8756512 2 + 9889416 GG i aotNan1.NW_018487195v1 C 0 I 25 s otoGar3.GL873528 20761400 2 - 38779656 aa i otoGar3.GL873528 I 7 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e cebCap1.NW_016107322v1 9618803 39 - 14377064 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e manLeu1.NW_012102865v1 2219874 518 + 4234846 M a score=121321.000000 s hg38.chr21_KI270874v1_alt 102987 21 + 166743 -AAAAAA-AATAAAACTGACAAT s panTro5.chr21 3728204 22 + 33445071 -AAAAAATAATAAAACTGACAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17354019 22 + 46275980 -AAAAAATAATAAAACTGACAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3293415 20 - 13858734 -AAAAA--AATAAAACTGACAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4476496 19 + 32716333 -AAAA---AATAAAACTGAGAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155431532 20 - 185818997 -aaaaa--aataaaactgagaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162255849 20 - 192294377 -AAAAA--AATAAAACTGAGAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8736849 20 + 9440265 -aaaaa--aataaaactgagaat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8466275 20 + 21915920 -AAAAA--AATAAAACTGAGAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15041122 20 - 90373283 -AAAAA--AATAAAACTGAGAAT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012120598v1 224931 20 - 13750039 -AAAAA--AATAAAACTGAGAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21939787 20 + 50472720 -AAAAA--ATGAAACCCAAGGAT i calJac3.chr21 I 25 C 0 s saiBol1.JH378168 5041400 20 + 13128814 -AAAAA--ATGAAACCCGAGGAT i saiBol1.JH378168 I 17 C 0 s cebCap1.NW_016107322v1 9618842 20 - 14377064 -AAAAA--ATGAAACCCAAGGAT i cebCap1.NW_016107322v1 I 39 C 0 s aotNan1.NW_018487195v1 8756539 20 + 9889416 -aaaca--atgaaacCTGAGAAT i aotNan1.NW_018487195v1 I 25 C 0 s otoGar3.GL873528 20761402 21 - 38779656 agacca--tagaaagctgagACT i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e manLeu1.NW_012102865v1 2219874 518 + 4234846 M a score=1541451.000000 s hg38.chr21_KI270874v1_alt 103008 146 + 166743 CTTTCCAGGAACTGAATTATAAAGTCAGCAGAATTTCAGAGAAAGTAAAATTTTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA s panTro5.chr21 3728226 146 + 33445071 CTTTCCAGGAACTAAATTATAAAGTCAGCAGAATTTCAGAGAAAGTAAAATTTTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17354041 146 + 46275980 CTTTCCAGGAACTGAATTATAAAGTCAGCAGAATTTCAGAGAAAGTAAAATTTTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3293435 145 - 13858734 CTTTCCAGGAACTGAATTATAAAGTCAGCAGAATTTCAGAG-AAGTAAAATTTTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCTAGGTGTATG-ACTCAAAAATCTTAAATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4476515 146 + 32716333 CTTTCCAGGAATTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTACTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155431552 146 - 185818997 ctttccaggaactgaattataaagttagcagaatttcagagaaagtaaaattctaaaatagtcaagtctgcaatg------cctagaccaaaactttgattagtacacatgaaattaaaatatccaggtgtatg-actcaaaaatcttaaata i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162255869 146 - 192294377 CTTTCCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8736869 146 + 9440265 ctttccaggaactgaattataaagttagcagaatttcagagaaagtaaaattctaaaatagtcaagtctgcaatg------cctagaccaaaactttgattagtacacatgaaattaaaatatccaggtgtatg-actcaaaaatcttaaata i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8466295 146 + 21915920 CTTTCCAGGAACTGAAGTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15041142 146 - 90373283 CTTTCCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTACAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2220392 146 + 4234846 CTTTCCAGGAACTGAAGTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA i manLeu1.NW_012102865v1 M 518 C 0 s colAng1.NW_012120598v1 224951 146 - 13750039 CTTCCCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTAAAATTCTAAAATAGTCAAGTCTGCAATG------CCTAGACCAAAACTTTGATTAGTACACATGAAATTAAAATATCCAGGTGTATG-ACTCAAAAATCTTAAATA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21939807 153 + 50472720 CTTCTCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTGAAAGTCTAAAATATACAAGTCTGCAATGCCAAGACCAAGACCAAGACTTAGTTTAGTACACATGAAATTGAAATATTGAGGTCTATGCACTCAAAAATCTTAAATA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5041420 147 + 13128814 CTTCTCAGGAACGGAATTATAAAGTTAGCAGAATTTCAAAGAAAGAGAAAGTCTAAAATATACAAGTCTACAATG------CCAAGACTAAGACTTAGTTTAGTTCACATGAAGTTAAAATATTGAGGTCTATGTACTCAAAAATCTTAAATA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9618862 147 - 14377064 CTTCTCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTGAAAGTCTAAAATACACAAGTCTGCAATG------CCAAGACCAAGACTTAGTTTAGTACACATGAAATTAAAATATTGAGGTCTATGCACTCAAAAATCTTAAATA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8756559 147 + 9889416 CTTCTCAGGAACTGAATTATAAAGTTAGCAGAATTTCAGAGAAAGTGAAAGTCTAAAATATACAAGTCTGCAATG------CCAAGACCAAGACTTAGTTTAGTACACATGAAATTAAAATATTGAGGTCTATGTACTCAAAAATCTTAAATA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20761423 146 - 38779656 CATTCCCCGGGCAGATTTACAAGGTTAGTAGAACCCCAGAGAAAGTTAAAGTCTAAAGTAGGCAAGTCTACAACA------CCAAGACAAAAATCTGAATTACTA-ACCTGGAATAAAAATACCAAAGTCTTtgccctcaaaaatcttgtata i otoGar3.GL873528 C 0 I 43 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=232683.000000 s hg38.chr21_KI270874v1_alt 103154 24 + 166743 Tggctgggt-tagtggctcatacct s panTro5.chr21 3728372 24 + 33445071 Tggctgggt-tagtggctcatacct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17354187 24 + 46275980 Tggctgggt-tagtggctcatacct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3293580 24 - 13858734 Tggctgggt-tagtggctcatacct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4476661 24 + 32716333 TGGCTAGGT-TACtggctcatacct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155431698 24 - 185818997 tggctgggt-tagtggctcacacct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162256015 24 - 192294377 Tggctgggt-tagtggctcacacct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8737015 24 + 9440265 tggctgggt-tagtggctcacacct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8466441 24 + 21915920 Tggctgggt-tagtggctcacacct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15041288 24 - 90373283 Tggctgggt-tagtggctcacacct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2220538 24 + 4234846 Tggctgggt-tagtggctcacacct i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 225097 24 - 13750039 TGGCTGGGT-TAGTGGCTCACACCT i colAng1.NW_012120598v1 C 0 M 127 s calJac3.chr21 21939960 25 + 50472720 Tggctgggtccagtggctcacacct i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5041567 25 + 13128814 TGCctgggtccagtggctcacacct i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9619009 25 - 14377064 Tggctgggtccagtggctcatacct i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8756706 25 + 9889416 Tggctgagtccagtggctcacacct i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761569 43 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=6092421.000000 s hg38.chr21_KI270874v1_alt 103178 828 + 166743 gtaatcctagcacttcaggaggccaatgtgggatgattacttgaggccaggagttcgagaccaccctgagcaacatagggagaccttgtctctacaaaa--aaaaa------agaagagagagagagagagaaatagcagggtcaacatggtgcacacctgtagtcctaactactcaaaagacagagta---agaatcatttgagctcaggaggtgaaggttgcagtgaactataatttcaacaccgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaaTACA-ATAAAATCTTGAATACCTGGATTCTCTTAAACCTTCTGGGTCCACCAGAAAGGATCCGTTTTTCCTTGTAAAAAATGAACACTGCTCCCTTCgtttggctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccacttgtaataggaggaacctggtgggaggtaattgaatcatgggggcgggtctttcctatgctgttctcatggtgctgaataagtctcatgcaagctgatgattttaaatatgggagtttccatgcaaaagctctctctttttgtctactgccatccacgtaagacatgatttactcctccttgccttccaccatgattgtgaggcctccccacccatgaggaactgtaaatccaataaatctcttttttttgtaaattgcccagtcttgggtatgtcttcatcagcagcatgaatacggactaatacagtaaattggtatcagtagagtggggccctgctgaaaagatacccaaaaatgtagaagcaaatttggaagtgggtaacagg s panTro5.chr21 3728396 819 + 33445071 gtaatcctagcacttcaggaggccaatgtgggatgattacttgaggccaggagttcgagaccaccctgagcaacatagggagactttgtctctacaaaa--aaaaa---------------aaagagagagaaatagcagggtcatcatggtgcacacctgtagtcctaactactcaaaagacagagta---agaatcatttgagctcaggaggtgaaggttgcagtgaactataatttcaacactgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaaTACA-ATaaaatcttgaagacctggattctcttaaaccttctgggtccactagaaaggatccgtttttccttgttaaagatgaacactgctcccttcgtttggctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccacgtgtaataggaggaacctggtgggaggtaattgaatcatgggggcgggtctttcctgtgctgttctcatggtgctgaataagtctcatgcaagctgatgactttaaatatgggagtttccacgcaaaagctctctctttttgtctactgccatccacgtaagacatgacttactcctccttgccttccaccatgattgtgaggcctccccacccatgaggaactgtaaatccaataaatctcttttttttgtaaattgcccagtcttgggtatgtcttcatcagcagcatgaatacggactaatacagtaaattggtatcagtagagtggggcactgctgaaaagatacctgaaaatgtagaagcaaatttggaactgggtaacagg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17354211 818 + 46275980 gtaatcctagcacttcaggaggccaatgtgggatgattacttgaggccaggagttcgagaccaccctgagcaacatagggagactttgtctctacaaaa--aaaaa---------------aaagagagagaaatagcagggtcatcatggtgcacacctgtagtcctaactactcaaaagacagagta---agaatcatttgagctcaggaggtgaaggttgcagtgaactataatttcaacactgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaaTACA-ATaaaatcttgaagacctggattctcttaaaccttctgggtccactagaaaggatccgtttttccttgttaaagatgaacactgctcccttcgtttggctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccacgtgtaataggaggaacctggtgggaggtaattgaatcatgggggcgggtctttcctgtgctgttctcatggtgctgaataagtctcatgcaagctgatgactttaaatatgggagtttccacgcaaaagctctctctttttgtctactgccatccacgtaagacatgacttactcctccttgccttccaccatgattgtgaggcctccccacccatgaggaactgtaaatccaataaatctc-tttttttgtaaattgcccagtcttgggtatgtcttcatcagcagcatgaatacggactaatacagtaaattggtatcagtagagtggggcactgctgaaaagatacctgaaaatgtagaagcaaatttggaactgggtaacagg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3293604 826 - 13858734 gtaatcctagcacttcaggaggccaaggtgggatgattacttgaggccaggagttcgagaccaccctgagcaacatagggagaccttgtctctacaaaa--aaaaa-------aaaaagagagagagagagaaatagcagggtcatcatggtgcacacctgtagtcctaactactcaaaagacagagta---agaatcatttgagctcaggaggtgaagcttgcagtgaactataatttcaacactgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaaTACA-ATaaaatcttgaatacctggattctcttaaaccttctgggtccactagaaaggatccgtttttccttgttaaagatgaacactgctcccttcgtttggctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccacctgtaataggaggagcctggtgggaggtaactgaatcatgggggcgggtctttcctatgctgttctcatggtgctgaataagtctcatgcaagctgatgattttaaatatgggagtttccacgcaaatgctctctctttttgtctactgccatccacgtaagacatgatttactcctccttgccttccaccatgattgtgaggcctccccacccatga-gaactgtaaatccaataaatctcttttttttgtaaattgcccagtcttgggtatgtcttcatcagcagcatgaatacggactaatacagtaaattggtatcagtagactggggcactgctgaaaagatacccgaaaatgtagaagcaaatttggaactgggtaacagg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4476685 823 + 32716333 gtaatcctagcacttcaggaggccaaggtgggatgattacttgaggccaggagttcaagaccaccctgagcaacatagggagaccttgtctctgcaaaa--aaaaa-------aaaaagagagagagagagaaatagcaggatcatcatggtgcacacctgtagtcctaactactcaaaagacagagta---agaatcacttgagctcaggaggtcaaggttgcagtgaactataattgcaacactgcactttagcctgggtgacagagagagattctgtctcaagaaaaataaataaaTACA-ATaaaatcttgaatacctggattcacttaaaccttctgggtccactagaaaggatctgtttttccttgttaaagATGAACACTGCTC----Cgtttggctttgtccccacccaaatctcatattgaattgtaactcccacaatccccaagtgtaataggaggaacctggtgggaggtaattgaatcacgggggcgggtctttcctgtgctgttctcatggtgctgaataagtctcatgcaagctgatgattttaaatatgggagtttccccacaaaagctctctctttttgcctactgccatccatgtaagacattacttactcctccttgccttccaccatgattgtgaggcctccccagccatgaggaactgtaaatccaataaatctctttttttggtaaattgcccagtcttgggtatgtctttatcagcagcatgaatatggactaatacagtaaattggtatcagtagagtggggcactgctgaaaagatacccgaaaatgtagaagcaaatttggaactgggtaacagg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155431722 771 - 185818997 gtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagaccttgcctctaaaaaa--aaaaa-------agagagagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagactaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaataca-ataaaatcttgaatacccagattatcttaaactttctgggtccactagaaaggatccgtttttccttgttaaagATGAACACTGCCCCCTTTgtttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcaggtctttcctgtgctgttctcatcatggtgaataagtctcatgcaagttgatggttttaaaactgggagtttacccacaaaagttctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttccgtcataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaatatggaccaatacagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacgtagaggcaaatctggaactaggtaacagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162256039 772 - 192294377 gtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagaccttgcctctaaaaaa--aaaaa------gagagagagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagactaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaaTACA-ATAAAATCTTGAATACCCAGATTATCTTAAACTTTCTGGGTCCACTAGAAAGGATCCGTTTTTCCTTGTTAAAGATGAACACTGCCCCCTTTgtttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcaggtctttcctgtgctgttctcatcatggtgaataagtctcatgcaagttgatggttttaaaactgggagtttacccacaaaagttctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttccgccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaatatggaccaatacagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacgtagaagcaaatctggaattaggtaacagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8737039 767 + 9440265 gtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagaccttgcctctaaaaaa--aaaaa-----------agagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagactaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaataca-ataaaatcttgaatacccagattctcttaaactttctgggtccactagaaaggatccgtttttccttgttaaagATGAACACTGCCCCCTTTgtttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcagggctttcctgtgctgttctcatcatggtgaataagtctcatgcaagttgatggttttaaaactgggagtttacccacaaaagttctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttccgccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtcttcatcagcagcatgaatatggaccaatacagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacgtagaagcaaatctggaactaggtaacagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8466465 772 + 21915920 gtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagaccttgcctctaaaaaa--aaaaa------aagagagagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagcctaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaaTACA-ATAGAATCTTGAATACCCAGATTATCTTAAACTTTCTGGGTCCACTAGAAAGGATCCGTTTTTCCTTGTTAAAGATGAACACTGCCCCCTTTgtttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcaggtctttcctgtgctcttctcatcatggtgaataagtctcatgcaagttgatggttttaaaactgggagtttacccacaaaagctctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttccgccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaatatggatcaatacagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacatagaagcaaatctggaactaggtaacagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15041312 765 - 90373283 gtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagatcttgcctctaaaaaa--aaaaa---------agagagagagagagagaaatagcaggatc---------------------------------------------------atcacttgagcctaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaaTACA-ATAAAATCTTGAATACCCAGATTATCTTAAACTTTCTGGGTCCACTAGAAAGGATCCGTTTTTTCTTGTTAAAGATGAACACTGCCCCC----tttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaatttccatgtgtaataggaggaacctggtgggaggtaatttaatcatgggtgcaggtctttcctgtgctgttctcctcatggtgaataagtctcatgcaagttgatggttttaaaaatgggagtttacccacaaaagctctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttctaccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaatatggaccaatatagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacgtagaagcaaatctggaactaggtaaccag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2220562 778 + 4234846 gtaatcccagaacttcaggaggccaaggtgggatgattgcttgaggccaggagtttgagaccaccctgagcagcatagggagaccttgcctctataaaa--aaaaagagagagagagagagagagagagagaaatagcagcatc---------------------------------------------------atcacttgagcctaggaggtcaaggctgcagtgaactataattgtaacactgcactttatcctgggtgac----agagattctgtctcaagaa----aaataaaTACA-ATAAAATCTTGAATACCCAGATTATCTTAGACTTTCTGGGTCCACTAGAAAGGATCCGTTTTTCCTTGTTAAAGATGAACACTGCCCCCTTTgtttgtctttgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtaataggaggaacctggtgggaggtaatttaatcataggtgcaggtctttcctgtgctgttctcatcatggtgaataagtctcatgcaagttgatggttttaaaactgggagtttacccacaaaagctctctctttttgcctactgccatccatgtaagacgtgacttactccaccttgccttccgccataattgtgaggcatccccagccataaggaactgtaagtccaataaatctctttattttgtaaattgaccagtcttggatatgtctttatcagcagcatgaatatggatcaatacagtaaattggtaacagtagagtggggcactgctgaaaagatacccaaaaacgcagaagcaaatctggaactaggtaacagg i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21939985 801 + 50472720 gtaatcccagcacttcagaagaccaagatgtgaggattgcttgaggccagtagttaaagatcagcctgagcaacatagcaagaccttgtctctacaaag---aaaa-----------------------aaaaatagcaaggtcatcatg--gcacacctatagtcctaactactcaagagacatagtaaagagaatcacttgagcccaagaggtcaaggctgcagtgaactataattgcaacactgcactccagcctgggtgacagcgtgagactctacatcaagat----aaataaataaaTATAACATCTTGAATACTCAGATTCTCTTAAACCTTTTGGGCCCTGGAGAAAGGATTCATTTCTCCTTGTTAAAGATGAACACTGCCCTCTtggtttggctgtg--cccatccaaatctcatcttgaattgtaactcccataattcccacatgtaatgggaggaacctagtgggagataattcaatcatgagggcaggtacttccagtgctgttctcatggtggtgagtaagtctcatgcaatctgatggttttaaaaattggagtttcaccacaaa-----tctacttttgcctgctgccatccatgtaagacgtgacttactcctccttgctgtccaccatgattgtgaggcctccccagcaatggggaactatagggtcattaaacctcttccttttgtaaatagcctggtctcaggtatgtcttattcagcagcctgaaaacagactaatacagtaaaccagtaccagtagagtggggcattgctgaaaagatacccaaaaatgtggaagcaattttgaaactgggtaacaga i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5041592 805 + 13128814 gtaatcacagcacttcagaaggccaaggtgggaggattgcttgaggccagtagttaaagatcagcctgagcaacatagcaagaccttgtctctacaaagaaaaaaa-----------------------aaaaatagcaaggtcatcatg--gcacacctgtagtcctaactactcaagagacagagtaaggagaatcacttgagcccaagaggtcaaggctgcagtgaactataattacaacactgcactccagcgtgggtgacagagtgagactctacatcaagat----aaataaataaaTATAACATCTTGAATACTCGGATTCTCTTAAACCTTCTGGGCCCTGGAGAAAGGATTCATTTCTCCTTGTTAAAGATGAACACTGTTCTCTtggtttggctgtgtcctcatccaaatctcatcttgaattgtaactcccataattcccacatgtaatgggaggaacctagtaggagataattcaatcatgggggcaggtccttctggtgctggtctcatggtggtgaataagtctcatgcaatctgatggttttaaaaattggagtttcaccacaaa-----tcgatttttgcctgctgccatcc-tgtaagatgtgacttactcctccttgttgtccaccatgattgtgaggcctccccagtgatgtggaactgtaaggtcattaaacctcctccttttgtaaatagcctagtctcaggtatgtctttttcagcagcctgaaaacagactaatacagtaaatcagtcacactagagtggggcactgctgaaaagatacccaaaaacgtggaagcaactttggaactgggtaacagg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9619034 804 - 14377064 gaaatcccagcacttcggaaggccaaggtgggaggactgcttgaggccagtagttaaagatcagcctgagcaacccagcaagaccttgtctctacaaag--aaaaa-----------------------aaaaatagcaaggtcatcatg--gcacacctgtagtcctaactactcaagagacagaataaggagaatcacttgagcccaagaggtcaaggctgcagtaaactataattgcaacattgcactccagcctgggtgacagagtgagactctacatcaagat----aaataaataaaTATAACATCTTGAATACTCAGATTCTCTTAAACCTTCTGGGCCCTAGAGAAAAGATACATTTCTCCTTATTAAAGATGAACACTGCCCTCTtggtttgtctgtgtccccatccaaatctcatcttgaattgtaactcccataattcccacatgtaatgggaggagcctagtgggagataattcagtcatgggggcaggtccttccagtgctggtctcatggtggtgaataagtctcttgcaatctgatgcttttaaaaattggagtttccccacaaa-----tctatttttgcctgctgccatccacgtaagacgtgacttactccttcttgctgttcaccatgattgcgaggcctccccagcaatgtggaactgtaaggtcattaaacctcttccttttgtaaatagcctagcctcaggtatgtctttttcagcagtctgaaaacagactaatacagtaaatcagtaccagtagagtggggcactgctgaaaagatacccaaaaatgtggaagcaactttggaagtgggtaacagg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8756731 791 + 9889416 gtaatcccagcacttcagaaggccaaggtgggaggattgcttgaggccagtagttaaagatcagcctgagcaacatagcaagaccttgtctctacaaag--aaaaa-----------------------aaaaatagcaaggtcatcatg--gcacacctgtagtcctaactactcaagagacagagtaaggagaatcacttgagcccaagaggtcaaggctgcagtgaactataattgcaaca-tgcactccagcctgggtgacagagcgagactctacatcaagat----aaataaataaaTATAAGATCTTGAATACTCAGATTCTCTTAAACCTTCTGGGCCCTGGAGAAAGGATTCATTTCTCCTTGTTAAAGATGAACACTGCCCTCTtggtttggctgtgtccccatccaaatctcatcttgaattgtaactcccataattcccacatgtaatgggaggaacctagtgggagataattcaatcatgggagcaggtccttctggtgctgttctcatggtggtgaataagtctcatgcaatctgatggttttaaaatttggagtttcaccacaaa-----tctattcttgcctgctgccatccatgtaagacgtgacttactcctccttgctgtccaccatgattgtgaggcctccccagagatgtggaactgtaaggtcattaaacctcttccttttgtaaatagcctagtctcaggtatgtctttttcagcagcctg-aaacagactaatacagtaaatcagtaccagtagagtggggcactg-----------cccaaaaacatggaagcaactttggaactgggtaacagg i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761569 43 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 225121 127 - 13750039 M a score=3365472.000000 s hg38.chr21_KI270874v1_alt 104006 352 + 166743 cagaggttggaacagtttggagggctcagaagaatccaggaaaataaggaaaactttggaacttcctagagacatgttaaatggctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttgctattttttatcaaagagaccagtgacattttgcccctgccctagagatttgtggaa-tttgaacttgagagagatgatgtagggtatttgat-ggaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaaagtcattcagttttaaaa s panTro5.chr21 3729215 353 + 33445071 cagaggttggaacagtttggagggttcagaagaatccaggaaaataaggaaaactttggaacttcctagagacatgttaaatggctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttgctattttttatcaaagagaccagtgacattttgcccctgccctagagatttgtggaattttgaacttgagagagatgatgtagggtatttgat-ggaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaaagtcattcagttttaaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17355029 353 + 46275980 cagaggttggaacagtttggagggttcagaagaatccaggaaaataaggaaaactttggaacttcctagagacatgttaaatggctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttgctattttttatcaaagagaccagtgacattttgcccctgccctagagatttgtggaattttgaacttgagagagatgatgtagggtatttgat-ggaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaaagtcattcagttttaaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3294430 353 - 13858734 cagaggtaggaacagtttggagggctcggaagaatccaggaaaataaggaaatctttggaacttcctagagacatgttaaatggctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttgctattttttatcaaagagaccagtgacattttgcccctgccctagagatttgtggaatttcgaacttgagagagatgatgtagggtatttgat-ggaagaaatttctaaacagcaaagcattcaagatgtgacttgggtgctgttaaagtcattcagttttaaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4477508 353 + 32716333 cagaggttggaacagtttggagggctcagaagaggccaggaaaataaggaaaactttggaacttcctagagacatgttaaatagctttgaacaaaatgctgatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaactcttgctattttttatcaaagagaccagtggcattttgcccctgccctagagatttgtggaactttgaacttgagagagatgatgtagggtatttgat-ggaagaaatttctaagcagcaaagcatttaagatgtgacttgggtgctgttaaagtcattcagttttaaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155432493 352 - 185818997 aagagattggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaatggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactagagtaaaggtaatgcttgatattttttatcaaagagactagtggcattttacccctgccctagagatttgtggaactttgaacttgagagagatgatgtatggtatttgac-agaagaaattcctaagcagcaaagcattcaagatgtgacttgggtgctgttaaaagcattcagttttaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162256811 352 - 192294377 cagagattggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaatggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaatgcttgatattttttatcaaagagactagtggcattttactcctgccctagagatttgtggaactttgaacttgagagagatgatgtatggtatttgac-agaagaaattcctaagcagcaaagcattcaagatgtgacttgggtgctgttaaaagcattcagttttaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8737806 352 + 9440265 aagagattggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaatggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaatgcttgatattttttatcaaagagactagtggcattttacccctgccctagagatttgtggaactttgaacttgagagagatgatgtatggtatttgac-agaagaaattcctaagcagcaaagcattcaagatgtgacttgggtgctgttaaaagcattcagttttaaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8467237 352 + 21915920 cagagattggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaatggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaacgcttgatattttttatcaaagagactagtggcattttacccctgccctagagatttgtggaactttgaacttgagagagatgatgtacagtatttgac-agaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaacggcattcagttttaaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15042077 352 - 90373283 cagagactggaacagtctggagggctcagaagaagccaggaaaataagg-aaattttggaacttcctagagacttgttaaagggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaatgcttgatattttttatcaaagagactagtggcattttacccttgccctagggatttgtggaactttgaacttgagagagatgatgtacagtatttgac-agaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaaaggcattcagttttaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2221340 352 + 4234846 cagagattggaacagtctggagggttcagaagaagccaggaaaataagg-aaattttgcaacttcctagagacttgttaaatggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaatttgttgggtactggagtaaaggtaatgcttgatattttttatcaaagagactagtggcattttacccctgccctagagatttgtggaactttgaacttgagagagatgatgtacagtatttgac-agaagaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaacggcattcagttttaaaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 225248 353 - 13750039 cagaagttggaacagtttggagggctcagaagaagccaggaaaataaggaaaagtttggaacttcctagagacttgttaaatggctttgaacaaaatgctaatagtaatatggacaatgaaattcaggctgaggtgatttcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttgatattttttatcaaagagaccagtggcattttacccctgccctagagatttgtggaactttgaacttgagagagatgatgtacggtatttgac-agaggaaatttctaagcagcaaagcattcaagatgtgacttgggtgctgttaaaggcattcagttttaaaa i colAng1.NW_012120598v1 M 127 C 0 s calJac3.chr21 21940786 351 + 50472720 cagaggttagaactgtttgaagggctcagaagaaaccaggaaaatatggaaaactttggaacttccaagagacttgttgaatggctttcaacaaaacatcaatagtaatatagacaataaaatccagtctgagcttgtctcagatggagatgagaaacttgttgggtactggagtaaaggtaactctta--tttttttagcaaagagactggtggcattttgctcctgccctagggattcgtgggcctttgaacttgagagagataatgtatggcatcaggt-gaaaaaaatttctaaacagctacgcattcaagaagtgacatggattctgttaaaggcattcagttttaaaa i calJac3.chr21 C 0 I 436 s saiBol1.JH378168 5042397 349 + 13128814 cagaggttagaacagtttgaagggctcagaagaagccaggaaaatgtggaaaactttggaacttcctagacactcgttgaatggctttcaacaaaatgttgatagtgatacagacaataaaattcagtctaagcttgtctcagatggagatgagaaacttgctggatactggagtaaaggtaa--ctta--tttttttagcaaagagactggtggcattttgctcctgccctagagatttgtagaactttgaacttgagagagataatgcatggggtcaggc-gaaaaaaatttctaagcagccacacattcaagaggtgacatggattctgttaaaggcattcagttttaaaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9619838 354 - 14377064 cagaggttagaacagtttgaagggctcagaagaagccaggaaaatatggaaaactttggaacttcctagagacttgttgaatggctttcaacaaaatgtcaatagtgatatagacagtaaaatccagtctgagcttgtctcagatggagatgagaaacttgttgggtactggagtaaaggtaactcttatttttttttagcaaagagactggtggcattttgctcctgccctagagatctgaggaactttgaacttgagagaggtaatatatggcatcaggcaaaaaaaaattcctaagcagctacgcattcaagaggtgacatgggttctgctaaaggcattcagtttcaaaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8757522 351 + 9889416 cagaggttagaacagtttgaagggctcagaagaagccaggaaaatatggaaaactttggaacttcctagagacttgttgaatggctttcaacaaaacgtcgatagtgatatagacaataaaatccagtctgagcttgtctcagatggagatgagaaacttgttgggtactggagtaaaggtaactctta--tttttttagcaaagagactggtggcattttgctcctgccctagagatttgtggaactttgaacttgagagagataatgtatggcatcaggc-gaaaaaaatttctaaacggctacgcattcaagaggtgacatggattctgctaaaggcattcagttttaaaa i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761569 43 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=12594562.000000 s hg38.chr21_KI270874v1_alt 104358 1300 + 166743 gggaaacagagcataaaagtttggaaaatttgcagcctgacaat-tgatagaaaagaaaatctcattttctga-gaagaaatccaagctggatgcagaaatttgcataagtgacacggagccgaatgttaatctccaagacaat-ggggaaaatatctccagggagtatcagaggctgtcatggcagctcttcccatcacagtcccagaggcctaggaggaaaaggtggttttgtttccggccccagggtccccatgctgtgtgtagcatagggacttggtgccctatgtcccagctgctccagccgtggctgacaggggccaatgtagagctcaagctgcagcttcagagggtgcaagcc----tcaagacttggcagcttatacatgatgttgagcctgccagtgcacagaagtcaagaattgggctttgggaccctccacctaaatttcggaggttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaaggtaaatgtggggtcggaacccccaaacagagctcctacttgggcactgcctagtggagctgcgagaagaaggccaccatcttccagaccctagaatggtagatccaccaacagcttgcaccgtgcacctggaaaagccacagagactcaatgccaacccatgaaatcagcctggaaggaggctgta-cctgcaaagccac-----aggaatggagctgctcaaggccgtgggaacccaccacttgcatcagcatgacctggatgtgagacatggagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctttgttttggccagtgtctcccatttggaatggttgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcatagacaaaagggacttgccttgtctc-------agatgagactttggactgtggacttctgagttaatgctgaaatgagttgagactttggggaactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgagaagggtcaggaatggaatgatat-ggtttgacattgcccccacccaaatctcatcttgaattgtacctctcacaattcccatgtgttgtgga--------------aggtaattgaatcatgggggcgggtctttcctgtgctgttcttatggtgctgaataagtctcatgcaagctgatggttttaa s panTro5.chr21 3729568 1301 + 33445071 gggaaacagagcataaaagtttggaaaatttgcagcctgacaatgtgatagaaaagaaaatctcattttctga-gaagaaatccaagctggatgcagaaatttgcataagtgacacggagccgaatgttaatccccaagacaat-ggggaaaatatctccagggcgtatcagaggctgtcatggcagctcttcccatcacaggcccagaggtctaggaggaaaaggtggttttgtttccagccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctgctccagccgtggctgacaggggccaatgtagagctcaagctgcagcttcagagggtgcaagcc----tcaagacttggcagcttatacatgatgttgagcctgccaatgcacagaagtcaagaattgggctttgggaccctccgcctaaatttcagaggttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaagggaaatgtggggttggaacccccaaacagagctcctacttgggcactgcctagtggagctgcgagaagaaggccaccatcttccagaccctagaatggcagatccaccaacagcttgcaccgtgcacctggaaaagccgcagagactcaatgccaacccatgaaatcagcctggaaggaggctgta-cctgcaaagccac-----aggaatggagctgctcaaggccatgggaacccaccacttgcatcagtgtgacctggatgtgagacatggagtcaaaggagatcattttggagctttaaaatttgactgccctgctgaattttggacttgcatggggcccataacccctttgttttggccagtgtctcccatttggaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcaaaagggacttgccttgtctc-------agatgagactttggactgtggacttctgagttaatgctgaaatgagttgagattttgggggactgttgggagggcatgatcagttctgaaatgtgaggacttgagatttgagaggggtcaggaatggaatgatat-ggtttgacattgcccccacccaaatctcatcttgaattgtaactctcacaattcccatgtgttgtgga--------------aggtaattgaatcatgggggcgggtctttcctgtgctgttcttatggtgctgagtaagtctcatgcaagctgatggttttaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17355382 1301 + 46275980 gggaaacagagcataaaagtttggaaaatttgcagcctgacaatgtgatagaaaagaaaatctcattttctga-gaagaaatccaagctggatgcagaaatttgcataagtgacacggagccgaatgttaatccccaagacaat-ggggaaaatatctccagggcgtatcagaggctgtcatggcagctcttcccatcacaggcccagaggtctaggaggaaaaggtggttttgtttccagccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctgctccagccgtggctgacaggggccaatgtagagctcaagctgcagcttcagagggtgcaagcc----tcaagacttggcagcttatacatgatgttgagcctgccaatgcacagaagtcaagaattgggctttgggaccctccgcctaaatttcagaggttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaagggaaatgtggggttggaacccccaaacagagctcctacttgggcactgcctagtggagctgcgagaagaaggccaccatcttccagaccctagaatggcagatccaccaacagcttgcaccgtgcacctggaaaagccgcagagactcaatgccaacccatgaaatcagcctggaaggaggctgta-cctgcaaagccac-----aggaatggagctgctcaaggccatgggaacccaccacttgcatcagtgtgacctggatgtgagacatggagtcaaaggagatcattttggagctttaaaatttgactgccctgctgaattttggacttgcatggggcccataacccctttgttttggccagtgtctcccatttggaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcaaaagggacttgccttgtctc-------agatgagactttggactgtggacttctgagttaatgctgaaatgagttgagattttgggggactgttaggagggcatgatcagttctgaaatgtgaggacatgagatttgagaggggtcaggaatggaatgatat-ggtttgacattgcccccacccaaatctcatcttgaattgtaactctcacaattcccatgtgttgtgga--------------aggtaattgaatcatgggggcgggtctttcctgtgctgttcttatggtgctgaataagtctcatgcaagctgatggttttaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3294783 1300 - 13858734 gggaaacagagcataaaagtttggaaaatttgcagcctgacaatgtgatagaaaagaaaatctcattttctga-gaagaaatccaagctggatgcagaaatttgcataagtgacatggagctgaatgttaatccccaagataat-ggggaaaatatctccagggtgtatcagaggctgtcatggaagctcttcccatcacaggcccagaggcctaggaggaaaaggtggttttgttt-cggccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctgctccagccgtggctgacaggggccaatgtagagctcaagctgcagcttcagagggtgcaagcc----tcaagatttggcagcttatacataatgttgagcctgccagtgcacagaagtcaagaattgggctttgggaccctccacctaaatttcagaggttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaagggaaatgtggggttggaacccccaaacagagctcctacctgggcactgcctagtggagctgcgagaagaaggccaccatcttccagaccctagaatggcagatccaccaacagcttgcaccgtgcacctggaaaagccacagagactcaatgccaacccatgaaatcagcctggaaggaggctgta-cctgcaaagccac-----aggagtggagctgttcaaggccatgggaacccaccacttgcatcagtgtgacctggatgtgagacatggagtcaaaggagatcattttggagctttaaaatttgactgccctgctggattttggacttgcatggggcccataacccctttgttttggccagtgtctcccatttggaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcaaaagggacttgccttgtctc-------agatgagactttggactgtggacttctgagttaatgctgaaatgagttgagattttgggggactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgagaggggtcaggaatggaatgatat-ggtttgacattgcccccacccaaatctcatcttgaattgtaactctcacaattcccatgtgttgtgga--------------aggtaattgaatcatggggtcgggtctttcctgtgctgttcttatggtgctgaataagtctcatgcaagctgatggttttaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4477861 1314 + 32716333 gggaaacagagcataaaagtttggaaaatttgcagcctgacaacgtgatagaaaagaaaatctcattttctga-gaagaaatccaagctgaatgcacaaatttgcacaagtgacagggagccaaatgttaatccccaagacaat-ggggaaaatatctccaggccatatcagaggctgtcatggcagctcttcccatca-aggcccagaggcctaggaggaaaaagttgttttgttgccagccccagggtccccatgctgtgtgcagcatacggacttggtgccctgtgtcccagctgctccagccgtggctgacaggggcgaatgtagagctcaggctgcagcttcagagggtgcaagcc----ttaagacttggcagcttacacatggtgttgagcctgccagtgcacagaagtcaagaattgggctttgggaccctccgcctaaatttcagaggttgtatggaagtgcctggatgttcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaagggaaatgtggggtctgaacccccatgcagtgtccctacttgggcactgcctggtggagctgcgagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcttgcaccgtgcacctggaaaagccgcagagactcaatgccaacccatgaaagcag-ctggaaggaggctgtaccctgcaaagccac-----aggaatggagctgctcaaggccatgggaacccaccacttgtatcagcatgacctggatgtgagacttggagtcaaaggaaatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctttgttttggccaatgtctcccatttggaatggctgtatttactcaatgcctctacccccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcaaaagggacttgccttgtctc-------agatgagactttggactgtggacttctgagttaatgctgaaatgagttgagacttcgggggactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgggaggggccaggaatggaatgatat-ggtttgatgtcgcccccacccaaatctcatcttgaattgtaactctcacaattcccatgtgttgtggaaggaacctggtgggaggtaattgaatcatgggggcgggtctttcccgtgctgttcttatggtgctgaataagtcttatgcaagctgatggtttaaa i nomLeu3.chr25 C 0 M 128 s rheMac8.chr3 155432845 1317 - 185818997 cggaaactgagcataaaagtttggaaattttgcagcctgacaatgtgatagaaaataaaatcccattttctga-ggagaaatccaagctggctgcagaaatttgcgtaagtgacaaggagccgaatgttaatccccaatacaat-ggggaaaatatctccagggcatatcagaggctgtcacagctgctcttcccatcacaggcccagaggcctaggaggaaaaagtggttttgttgccagccccagggtccccatgctgtgtgcagcataggaacttggtgccctgtgtcccagctgctccagccatggctgaaaggggccaacatagagctcaggctgcagcttcagagggtacaagcctcaatcaagacttggcagcttccacatggtattgagcctgccagtgcacagaagtcaagaattggggtttgggaccctctgcctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtttgctataggggtggcactttcatggagaacccctgctagggcagtgcacaagggaaatgtggggtcggaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcctgtaccttgaatctggaaaatccgcagagactcaatgccaacccatgaaagcagcctggagggaggctgtaccctgcaaagccac-----agggatggagctgctcaaggccatgggtacccaccacttgcatcactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctctgttttggccaatgtcttccatttgcaaaggctgtatttactcaatgcttctactcccattgtatctaagaagtagct-acttgcttttgattttacaggctcataggcagaagggacttgccttgtctc-------agatgagactttgggctgtggaatttggagttaatgctgaaacgagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacgtgagatttgggagaggccaggagTACA---atatgggtttgaagttgcccccacccaaaacccatcttggattgtaactctcacaattcccatgtgttgtggaaggaacctagtgggaggtaattgaatcatgggggtaggcctttcccatgctgttttcatggtggtgaataagtctcatgagatcttatggttttag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162257163 1316 - 192294377 cggaaactgagcataaaagtttggaaattttgcagcctgacaatgtgatagaaaataaaatcccattttctga-ggagaaatccaagctggctgcagaaatttgcgtaagtgacaaggagccgaatgttaatccccaatacaat-ggggaaaatatctccagggcatatcagaggctgtcacagctgctcttcccatcacaggcccagaggcctaggaggaaaaagtggttttgttgccagccccagggtccccatgctgtgtgcagcataggaacttggtgccctgtgtcccagctgctccagccatggctgaaaggggccaacatagagctcaggctgcagcttcagaggttacaagcctcaatcaagacttggcagcttccacatggtattgagcctgccagtgcacagaagtcaagaattggggtttgggaccctctgcctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtttgctataggggtggcactttcatggagaacccctgctagggcagtgcacaagggaaatgtggggtcggaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccactatcctccagaccctaggatggtagatccaccaacagcctgtaccttgaatctggaaaatccgcagagactcaatgccaacccatgaaagcagcctggagggaggctgtaccctgcaaagccac-----agggatggagctgctcaaggccatgggtacccaccacttgcatcactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctctgttttggccaatgtcttccatttgcaaaggctgtatttactcaatgcttctactcccattgtatctaagaagtagct-acttgcttttgattttacaggctcataggcagaagggacttgccttgtctc-------agatgagactttgggctgtggactttggagttaatgctgaaacgagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacgtgagatttgggagaggccaggagTACA---atat-ggtttgaagttgcccccacccaaaacccatcttggattgtaactctcacaattcctatgtgttgtggaaggaacctagtgggaggtaattgaatcatgggggtaggcctttcccatgctgttttcatggtggtgaataagtctcatgagatcttatggttttag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8738158 1316 + 9440265 cggaaactgagcataaaagtttggaaattttgtagcctgacaatgtgatagaaaataaaatcccattttctga-ggagaaatccaagttggctgcagaaatttgcgtaagtgacaaggagccgaatgttaatccccaatacaat-ggggaaaatagctccagggcatatcagaggctgtcacagctgctcttcccatcacaggcccagaggcctaggaggaaaaagtggttttgttgccagccccagggtccccatgctgtgtgcagcataggaacttggtgccctgtgtcccagctgctccagccatggctgaaaggggccaacatagagctcaggctgcagcttcagagggtacaagcctcaatcaagacttggcagcttccacatggtattgagcctgccagtgcacagaaatcaagaattggggtttgggaccctctgcctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtttgctataggggtggcactttcatggagaacccctgctagggcagtgcacaagggaaatgtggggtcggaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcctgtaccttgaatctggaaaatccgcagagactcaatgccaacccatgaaagcagcctggagggaggctgtaccctgcaaagccac-----agggatggagctgctcaaggccatgggtacccaccacttgcatcactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctctgttttggccaatgtcttccatttgcaaaggctgtatttactcaatgcttctactcccattgtatctaagaagtagct-acttgcttttgattttacaggctcataggcagaagggacttgccttgtctc-------agatgagactttgggctgtggactttggagttaatgctgaaacgagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacgtgagatttgggagaggccaggagTACA---atat-ggtttgaagttgcccccacccaaaacccatcttggattgtaactctcacaattcccatgtgttgtggaaggaacctagtgggaggtaattgaatcatgggggtaggcctttcccatgctgttttcatggtggtgaataagtctcatgagatcttatggttttag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8467589 1319 + 21915920 gggaaacagagcataaaagtttggaaattttgcagcctgacaatgtgatagaaaagaaaatctcattttctga-ggagaaatccaagctagctgcaggaatttgcataagtgacaaggagccgaatgttaatccccaatacaat-gaggaaaatatctccagggcatatcagaggctgtcacagttgctcttcccatcgcaggcccagaggcctaggaggaaaaagtggttttgttgccagccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctgctccagccgtggctgaaaggggccaatgtagagctcaggctgcagcttcagagggtacaagcctcaatcaagacttggcagcttccatgtggtattgagcctgccagtgcacagaagtcaagaattggggtttggga-cctctacctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtttgctgcaggggtagcactttcatggagaacctctgttagggcagtgcacaagggaaatgtggggtcggaacctccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccaccattctccagaccctggaatggtagatccaccaacagcttgtaccttgaatctggaaaagccacagagactcaatgccaacccatgaaagcagcctggagggaggctgtaccctgcaaagccac-----agggatggagctgctcaaggccatgggtacccaccacttgcatcactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctgtgttttggccaatgtctcccatttggaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcagaagggacttgccttgtctc-------agatgagactttggactgtggactttggagttaatgctgaaacgagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgggaggagccaagagtagaatgatat-ggtttgacgttgcccccacccaaaacccatcttggattgtaactctcacaattcccatgtgctgtggaaggaacctagtggaaagtaattgaatcatgggggtagacctttcccatgctgttttcatggtggtgaataagtctcatgagatctgatggttttaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15042429 1320 - 90373283 gggaaacagagcataaaagtttggaaattttgcagcctgacaatgtgatagaaaagaaaatcccattttctga-gaagaaatccaagctagctgcagaaatttgcataagtgacaaggagccgaatgttaatccccaatacaat-gaggaaaatatctccaggtcatatcagaggctgtcacaactgctcttcccatcacaggcccagaggcctaggaggaaaaagtggttttcttgccagccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctgctccagccgtggctgaaaggggccaatgtagagctcaggctgcagcttcagagggtacaagcctcaatcaagacttggcagcttccatgtggtattgagcctgccagtgcacagaagtcaagaattcgggtttgggaccctctgcctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtatgctgcaggggtggcactttcatggagaacctctgttaaggcagtgcacaagggaaatgtggggtcagaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcttgtaccttgaatctgaaaaagccacagagactcaatgccaacccatgaaagcagcctgcagggaggctgtaccctgcaaagccac-----agggatggagctgctcaaggccatgggtgcccaccacttgcatcactgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctgtgttttggccaatgtctcccatttggaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgatttgacaggctcatagacagaaaggacttgccttgtctc-------agatgagactttggactgtggactttggagttaatgctgaaacgagttgagactttgggggactattgggagggcatgatcagttctgaaatgtgaggacatgagatttgggaggagccaagagtagaatgatat-ggtttgacgttgcccccacccaaaacccatcttggattgtaactcttacaattcccatgtgctgtggaaggaacctagtggaaagtaattgaatcatgggggtagacctttcccatgctgttttcatggtggtgaataagtctcatgagatctaatggttttaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2221692 1317 + 4234846 gggaaac--agcataaaagtttggaaattttgcagcctgacaatgtgatagaaaagaaaatctcattttctga-ggagaaatccaagctagctgcagaaatttgcataagtgataaggagccgaatgttaatccccaatacaat-gaggaaaatatctccagggcatatcagaggctgtcacagttgctcttcccatcgcaggcccagaggcctaggaggaaaaagtggttttgttgccagccccagggtccccatgctgtgtgcagcatagggacttggtgccctgtgtcccagctcctccagccgtggctgaaaggggccaatgtagagctcaggctgcagcttcagagggtacaagcctcaatcaagacttggcagcttccatgtggtattgagcctgccagtgcacagaagtcaagaattggggtttggga-cctctgcctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtttgctgcaggggtagcactttcatggagaacctctgttagggcagtgcacaagggaaatgtggggtcggaacccccacacagagtccctacttgggcactgcctagtggagctgccagaagaaggccaccatcctccagaccctagaatggtagatccaccaacagcttgtaccttgaatctggaaaagccgcagagactcaatgccaacccatgaaagcagcctggagggaggctgtaccctgcaaagccac-----agggatggagctgctcaaggccatgggcacccaccacttgcatcactgtgacctggatgtgagacacgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataacccctgtgttttggccaatgtctcccatttagaatggctgtatttactcaatgcctctactcccattgtatctaagaagtagctaacttgcttttgattttacaggctcataggcagaagggacttgccttgtctc-------agatgagactttggactgtggactttggagttaatgctgaaacaagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgggaggagccaagagtagaatgatat-ggtttgacgttgcccccacccaaaacccatcttggattgtaactctcacaatttccatgtgctgtggaaggaacctagtggcaagtaattgaatcatgggggtaggcctttcccatgctgttttcatggtggtgaataagtctcatgagatctgatggttttaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 225601 1311 - 13750039 cggaaactgagcatacaagtttggaaattttgcagcctgacaatgtgatagaaaagaaaatcccattttctga-ggagaaatccaagctggctgcagaaatttgcataagtgacaaggaaccaaatgttaatccccaatacaat-ggggaaaatatctccagggcatatcagaggctgtcacagctgctcttcccatcaca-gcccaggggcctaggaggaaaaagtggttttgctgccagccccagggtccccatgctgtgtgcagcataggaacttggtgccctgtgtcccagctgctccagctgtggctgaaaggggccaatgtagagctcaggctgcagcttcagagggtgcaagcc----tcaagacttggcagcttccacagggtattgagcctgccagtgcacagaagtcaagaattggggtttgggaccctctgcctaaatttcagaggttgtatggaagtgcctagatattcaggcagaagtttgctgcaggggtggcactttcatggagaacctctgctagggcagtgcacaagggaaatatggggttcgaaactccacacagagtccctacttgggcactgcctagtggagcttccagaagaaggccaccaccctccagaccctagaatggtagatccaccaacagcttgtaccctgaatctggaaaagctgcagagactcaatgacaacccatgaaagcagcctggagggaggctgtaccctgcaaagccac-----agggatggagctgctcaaggccatgggtacccaccacttgcatcagtgtgacctggatgtgagacatgtagtcaaaggagatcattttggagctttaagatttgactgccctgctggattttggacttgcatggggcccataatccctctgttttggccaatgtctcccatttggaatggctgtatttactcaatgcctctactcccactgtatctaagaagtagctaacttgcttttgattttataggcttataggcagaagggacttgccctgtctc-------agatgcgactttggactgtggactttggagttaatgctgaaacgagttgagactttgggggactgttgggagggcatgatcagttctgaaatgtgaggacatgagatttgggagaagccaggagtggaatgatat-ggtttgatgttgcccccatccaaaacccatctgggattgtaactctcacaattaccatgtgttgtggaaggaacctagtgcgaggtaattgaattatgggggtaggcctttcccacgctgttttaatggtgg----taagtctcatgagatctgatggttttaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21941573 1315 + 50472720 gggaaacggagcataaaagttcagaaaatttgcagcctgacaatgtgatagaaaagaaaatcccattttctgagggagaaattcaagcaagctgcagaaatttgcgtaagtgatgaagagccaaatgttaacccccaagacaat-ggggaaaatgtctccagggcatgtcagag------tcagcagctcttcccatcacaggcccagaggcctaaaaggaaaaagtggtttcattgccgggcctaggatccccattctatgtgcagcaaaggaacatgatgctctctgtcccagctgctccaaccatggctgaaaggggccaatgtagagctcaggccatggcttcggagggtgcaagct----gcaagacttggctgcttccacatggtattgagcctgccagtgcacggaagtcaagacttggggtttgggactctctgcctagatttcagaggttgtatggaaatgcctggatctccaggcagaagtttgctgca-gggtggaactctcatggagaacctctgctaggacagtgcacaagggaaatgtagggttggagcccccacacagagtccctaggtgggcacagcatactggagctgtgagaaggccgccaccatcctccagaccctaaaatggtagatccaccaacaacttgcactgtttacctggaaaagctgcagacactcaatgccaacccatgaaagcagcctggagggaagctgtaccctgcaaagccac-----agggatggagctgctcaagaccataggaacccaacacttgcatcagcacgaactggatgtgagacacatagtcaaaggagatcattttggagctttaagatttgactgccctgctggatttcagacttgcatgggacccatcacccctttgttttggccaatgtctcccatttgcaatggctgtatttacccagtgcctctacccccattgtatctaagaagtaactaacttgcttttgattttagaggctcataggcagaagggacttgccttgtctctttgacaaaatgcgactttggat--tggacttttgagttagtgttgaaatgagttgagaccttgggtgactgttgggagggcatgatttgttctaaaatgtgatgatatgagatttggaaggagccaggagtggaatgatat-ggtttgacagtgcccccacccaaatctcatcttgaattgtagctctcagaattcccatgtgttgtgggaggaagctggttggaggtgattgaatcatgggggcaggtctttcccatgctgttctcatggtggtgagtaagtctcatgagatctagtagttttaa i calJac3.chr21 I 436 C 0 s saiBol1.JH378168 5042746 1307 + 13128814 gggaaatggagcataaaaatttggaaaatttgcagcctgataatgtgatagaaaacaaaatcccattttctga-ggagaaattcaagcaagctgcagaaatttgcataactgatgaagagccaaatgttaatccccgagacaatgggggaaaatgtctccagggcatgtcagag------tcggcagctcttcccatcacagacccagagacctaaaatgaaaaagtggtttcattgccaggcctaggatctccattctctgtgcagcataggaacatggtgccctatgtcccagctgctccaaccgtggctgaaaggggccaatgtagagctcaggccatggcttcaga-ggtgcaagcc----acaagacttggcagcttccacatggtattgagcctgccagtgcacagaagtcaagagttggggtttggga--ctctgcttatatttcagaggttgtatcgaaatgcctggatctccaggcagaagtttgctgca-gggtggtgctctcatggagaacctctgctaggacactgcacaagggaaatgtagggtcggagcccccacacagagtccctaggtgggcactgcctagtggagctgtgagaagaaggccaccatcctccagaccctaaaatggtagatccaccaacaacttgcactgtgtacctggaaaagctgcaga----cagtgccaacccatgaaagcagcctggagggaagctgtgctgtgcaaag-tgg-----agggatggagctgctcaagaccataggaagccaacacttgcatcagcatgaactggatgtgagacatgtagtcaaaggagatcatttcagagctttaagatttgactgccctgctggatttcagacttgcatgggacccatcacccctttgttttggccaatgtctcccatttgcaatggctgtatttacccagtgcctctacccccattgtatctaagaagtaactaacttgcttttgattttagaggctcataggcagaagggtcttgccttgtctctttgacaaaatgcgactttggat--tggacttttgagctaatgctgaaatgagttgagaccttgggtgactgttgggagggcatgatttgttctaaaatgtgacgatatgagatttggaagaagccaggagtggaatgatat-ggtttgacagtgaccccacccaaatctcatcttgaatggtagctctcacaattcccatgtgttatgggaggaagctggtaggaggtgagtgaatcatgggggcaggtcatccccatgctgttctcatggtggtgagtaaagctcacgagatctagtagttttaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9620192 1312 - 14377064 gggaaatggagc-------tttggaaaatttgcagcctgacaacgtgatagaaaagaaaatcccattttctga-ggagaaattcaagtaagctgcagtaatttgcctaagtgatgaagagccaaatgttaatccccaagacaat-ggggaaaatgtctccagggcatgtcagag------ttggcagctcttcccatcagaggcccagaggcctaaaaggaaaaggtggttttattgccaggcctaggatccccattttatgtgctgcataggaacatggtgccctatgtcccagctgctccaaccatcactgaaaggggccaatgtagagctcatgacatggcttcagagggtgcaagcc----acaagacttggcagcttccacacggtattgagcctgccagtgcaaagaagtcaagaactggggtctgggactttctgcctatatttcagaggttgtatggaaatgcctgaatctccaggcagaagtttgctgca-gggtggtgctctcatggagaacctctgctaggacagtgcacaagggaaatgtagggttggagcccgcacacagagtccctaggtgggcactgcctagtggagctgtgagaaggaggccaccatcctccagaccctaaaatggtagatccaccaacaacttgcactgtgtacctggaaaagctgcagacactcaatgccaacccatgaaagcagcctggagggaagctgtaccctgcaaagccacagggaagggatggagctgctcaagaccataggaacccaacacttgcatcagcatgaactggatgtgagacacatagtcaaaggagatcatttcggagctttaagattttcctgccctgctggatttcagacttgcatgggacccatcacccctttgtattggcaaatgtctcccatttgcaatggctgtatttactcagtgcctctacccccattgtatctaagaagtaactaacttgcttttgattttagaggctcataggcagaagggacttgccttgtctctttgacaaaatgcgactttggat--tggacttttgagttagtgctgaaatgagatgaaaccttgggtgactgttgggagagcatgatttgttctaaaatgtgatgaaatgagatttggaaggagccaggaatggaatgatat-ggtttgacagtgcccccacccaaatctcatcttgaattgtagctctcacaattcccatgtgttatgggaggaagctggtaggaggtgattgaatcatggggggaggtctttcccacgctattctcatggtggtgagtaagtctcacgagatctagtagttttaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8757873 1314 + 9889416 gggaaacagagcataaaagtttggaaaatttgcagcctgacaatgtgatagaaaagaaaatcccattttctga-ggagaaattcaagcaagctgcagaaatttgcataagtgatgaagagccaaatgttaatccccaagacaat-ggggaaaatgtctccagggcatgtcagag------aaagcagctcttcccatcacaggcccagaggccaaaaaggaaaaagtggtttcgttgccgggcctaggatccccattctatgtgcagcataggaacatggtgccctatgtcccagctgctccaaccatggctgaaaggggccaacgtagagctcaggccatggcttcagagggtgcaagct----gcaagacttggcagcttccacatggtattgagcctgccagtgcacagaagtcaagaattggggtttgggactctctgcctatatttcagaggttatatggaaatgcctggatctccaggcagaagtttgctgca-gggtggtgctctcatggagaacctccgctaggacagtgcacaagggaaatgtaggggcagagcccccacacagagtccctaggtgggcactgcctagtggagctgtgagaagaaggccaccatcctccagaccctaaaatggtagctccaccaacaacttgcactgtgtacccggaaaagctgcagacactcaatgccaacccatgaaagcagcctggagggaagctgtaccctgcaaagccac-----agggatggagctgctcaagaccataggaacccaacacttgcatcagcatgaactggatgtgagacacgtcgtcaaaggagatcatttcggagctttaagatctgactgccctgctggatttcagacttgcatgggacccatcacccctttgttttggccaatgtctcccatttgcaatggctgtatttacccaatgcctctaccctcattgtatctaagaagtaactaacttgcttttgattttagaggctcataggcagaagggacttgccttgtctctttgacaaaatgcgactttggat--tggacttttgagttagtgctgaaatgagttgagaccttgggtgactgttgggagggcatgatttgttctaaaatgtgatgacataagatttggaaggagccaggagtggaatgatat-ggtttgacagtgcccccacccaaatctcatcttgaattgtagctctcacaattcccatgtgttgtgggaggaaactggtaggaggtgattgaatcatgggggcaggtctttcccatgctgttctcatggtggtgagtaagtctcatgagatctagtagttttaa i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761569 43 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=722196.000000 s hg38.chr21_KI270874v1_alt 105658 87 + 166743 aaacaggagtttccccatacaagctctctctttttgcctgctgccatccatgtaagatgtgacttaatcctccttgccatccaccat s panTro5.chr21 3730869 86 + 33445071 aaacaggagtttcccca-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctccttgccatccaccat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17356683 86 + 46275980 aaacaggagtttcccca-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctccttgccatccaccat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296083 87 - 13858734 aaacaggagtttccccacacaagctctctctttttgcctgctgccatccatgtaagatgtgacctactcctccttgccatccaccat i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155434162 86 - 185818997 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctcctcgccttccaccat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162258479 86 - 192294377 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctcctcgccttccaccat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8739474 86 + 9440265 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctcctcgccttccaccat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8468908 86 + 21915920 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctcctcgccttccaccat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15043749 86 - 90373283 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctccttgccttccatcat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223009 86 + 4234846 aaacaggagtttcccaa-acaagctctctctttttgcctgctgccatccatgtaagatgtgacttactcctcctcgccttccaccat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 226912 86 - 13750039 aaacaagagtttcccaa-acaagctctctcattttgcctgctgccatccatgtaagatgtgacttactcctccttgccttccactat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21942888 83 + 50472720 aaacaggagtttctctgcacaagccct----ttttgcctgctgccatccatgtaagatgtgacttattcctccttgccttccatcat i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044053 83 + 13128814 aaacaggactttcccggcacaagctct----ttttgcctgctgccatccatgtaagatgtgacttactcctcctgtccttccatcat i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9621504 83 - 14377064 aaacaggagtttccctgcacaagctct----ttttgcctgctgccatccatgtaagatgtgacttactcctccttggcttccatcat i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759187 83 + 9889416 aaacaggtgtttctccgcacaagctct----ttttgcctgctgccatccatgtaagatgtgacttactcctccttgccttccatcat i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761569 43 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I e nomLeu3.chr25 4479175 128 + 32716333 M a score=748830.000000 s hg38.chr21_KI270874v1_alt 105745 77 + 166743 gattgtgaggcctcctcagccacatggaactggtagtccattaaacctctttcttttgtaaatagcctagtcttggg s panTro5.chr21 3730955 77 + 33445071 gattgtgaggcctccccagccatgtggaactggtagtccattaaacctctttcttttgtaaatagcccagtcttggg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17356769 77 + 46275980 gattgtgaggcctccccagccatgtggaactggtagtccattaaacctctttcttttgtaaatagcccagtcttggg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296170 77 - 13858734 gattgtgaggcctccccagccatgtggaactggtagtccattaaacctctttcttttgtaaatagcccagtcttggg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479303 77 + 32716333 gattgtgaggcctccccagccatgtggaactgttagtccatgaaacctctttcttttgtaaatagcccaagctcCAA i nomLeu3.chr25 M 128 C 0 s rheMac8.chr3 155434248 77 - 185818997 gattgtgaggcctccccagtcatgtggaactgttagtccattaaacctctttcttttgtaaatagcccagtcttggg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162258565 77 - 192294377 gattgtgaggcctccccagtcatgtggaactgttagtccattaaacctctttcttttgtaaatagcccagtcttggg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8739560 77 + 9440265 gattgtgaggcctccccagtcatgtggaactgttagtccattaaacctctttcttttgtaaatagcccagtcttggg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8468994 77 + 21915920 gattgtgaggcctccccagtcatgtggaaatgttagtccattaaacctctttcttttgtaaatagcccagtgttggg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15043835 77 - 90373283 gattgtgaggcctccccagtcatgtggaactgttagtccattaaacctctttcttttgtaaatagcccagtcttggg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223095 77 + 4234846 gattgtgaggcctccccagtcatgtggaaatgttagtccattaaacctctttcttttgtaaatagcccagtcttggg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 226998 77 - 13750039 gatggtgaggcctcaccagtcatgtggaactgttagtccattaaacctctttcttctgtaaatagcccagtcttggg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21942971 76 + 50472720 gattgtgaggcctccccagccatgcggaattcttagtctattaaacttctttcttttgtaaattcccctgtctt-gg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044136 77 + 13128814 gattatgaggcctccccagccatgtggaattcttagtccattaaacttctttgttttgtaaattccccagtcttggg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9621587 77 - 14377064 gattatgagggctccccagccatgtggaattcttagtccattaaacttctttcttttgtaaattccccagtcttggg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759270 77 + 9889416 gattatgaggcctccccagccatgtggaattcttagtccattaaacttctttcttttgtaaattccccagtcttggg i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e otoGar3.GL873528 20761569 43 - 38779656 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=314897.000000 s hg38.chr21_KI270874v1_alt 105822 34 + 166743 tttgtctttatcagcagcatgaatacaCCCCTTT-- s panTro5.chr21 3731032 34 + 33445071 tatgtctttatcagcagcatgaatacaCCCCTTT-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17356846 34 + 46275980 tatgtctttatcagcagcatgaatacaCCCCTTT-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296247 34 - 13858734 tatgtctttatcagcagcatgaatacaCCCCTTT-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479380 33 + 32716333 TGTGGTGGAATTC-CAACATGATTACACCCCTTT-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434325 34 - 185818997 tatgtctttatcagcagcatgaatacaCCCCTTT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162258642 34 - 192294377 tatgtctttatcagcagcatgaatacaCCCCTTT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8739637 34 + 9440265 tatgtctttatcagcagcatgaatacaCCCCTTT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469071 34 + 21915920 tatgtctttatcagcagcatgaATACGCCCCTTT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15043912 34 - 90373283 tatgtctttatcagcagcatgaATACGCCCCTTT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223172 34 + 4234846 tatgtctttatcagcagcatgaATACGCCCCTTT-- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227075 34 - 13750039 taggtctttatcagcagcatgaatacaCCCCTTT-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943047 34 + 50472720 tatgtctttatctatagcatgaATATACCCTTTC-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044213 34 + 13128814 tatgtctttatctgcagcatgaatacaCCCCTTC-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9621664 34 - 14377064 tatgtctttatctgcagcatgaatacaCCCCTTC-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759347 34 + 9889416 tatgtctttatctgcagcgtgaatacaCCCCTTC-- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20761612 34 - 38779656 tttctcgtcatta--aagatgaacactgcccctctt i otoGar3.GL873528 I 43 C 0 e proCoq1.NW_012144079v1 1091818 15465 + 2694913 I e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=1043382.000000 s hg38.chr21_KI270874v1_alt 105856 89 + 166743 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAGCACATCTCCCTCTGAAGATTCATCTCAACCTTTGCTTGGAGCATCTGGtg s panTro5.chr21 3731066 89 + 33445071 ACTTGAAGATGATGCAGAGACTCCTGCCTTTCAAGATAGCACATCTCCCTCTGAAGATTCATCCCAACATTTGCTTGGAGCATCTGGtg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17356880 89 + 46275980 ACTTGAAGATGATGCAGAGACTCCTGCCTTTCAAGATAGCACATCTCCCTCTGAAGATTCATCCCAACATTTGCTTGGAGCATCTGGtg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296281 89 - 13858734 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAGCACATCTCCCTCTGAAGATTCATCCCAACCTTTGCTTGGAGCATCTGGtg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479413 89 + 32716333 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCGAGATAGCACATCTCCCTCTGAAGATTCATCCCAACCTTTTCTTGGAGCATCTGGTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434359 89 - 185818997 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162258676 89 - 192294377 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGtg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8739671 89 + 9440265 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469105 89 + 21915920 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAATCTTTGCTTGGAGCATCTGGTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15043946 89 - 90373283 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCTCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGtg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223206 89 + 4234846 ACTTGAAGATGATGCAGAGACTTCTGCCTTTCAAGATAACACATCGCCCTCTGAAGATCCACCCCAACCTTTGCTTGGAGCATCTGGtg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227109 89 - 13750039 ACTTGAAGATGAGGCAGAGACTTCTGCCTTTCAAGATAATACACCTCCCTCTGAAGATCCACCCCAATCTTTGCTTGGAGCATCTGGTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943081 89 + 50472720 ACCTGAAGATGATGCAGAGACTTCTCCCTTTCAAGGCAACACACCTCCCTCTGAAGATTCACCCCAACCTTTGCTAGAAGCAACTGGtg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044247 89 + 13128814 ACCTGAAGCTGATGCAGAGACTTCTCCCTTTCAAGGCAACACATCTCCCTCTGAAGATTCACTCCAACCTTTGCTAGGAACacctggtg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9621698 89 - 14377064 ACCTGAAGATGATGCAGAGACTTCTCCCTTTCAAGGCAACACATCTCCCTCTGAAGATTCACCCCAACCTTTGCTAGGAACacctggtg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759381 82 + 9889416 ATCTGAAGATGATGCAGAGA-------CTTTCAAGGCAACACATCTCCCTCTGAAGAATCACCCCAACCTTTGCTAGGAGCATCTGGtg i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1107283 87 + 2694913 acttgaagatgatgcagagacttctgcctttcaaaacaacacatgtccctcttaagatc-agcccAATCTTTGTTAGGAG-CTCCAGAg i proCoq1.NW_012144079v1 I 15465 C 0 s otoGar3.GL873528 20761646 88 - 38779656 ggttgaaggggatgcagagacttctgtcttt-aagacaacacatgttcctcttaaaatctagcccaatctTTGCTAGCAGCCTccagtg i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e canFam3.chr31 13836853 553 + 39895921 I e mm10.chr16 78134314 752 + 98207768 I a score=515817.000000 s hg38.chr21_KI270874v1_alt 105945 48 + 166743 actgaagaagaggcca--aatccatgaat-aatcattatacaatgagtggg s panTro5.chr21 3731155 48 + 33445071 actgaagaagaggcca--aatccatgaat-aatcattatacaatgagtagg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17356969 48 + 46275980 actgaagaagaggcca--aatccatgaat-aatcattatacaatgagtagg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296370 48 - 13858734 actgaagaagaggcca--aatccatgaat-aatcattatacaatgagtggg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479502 48 + 32716333 ACTGAAGAAGAGGCCA--AATCCATGAAT-AATCATTATACAATGAGTGGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434448 48 - 185818997 ACTGAAAAAGAGGCCA--AATCCATGAAT-AATCATTATACAATGGATAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162258765 48 - 192294377 actgaaaaagagtcca--aatccatgaat-aatcattatacaatggataag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8739760 48 + 9440265 ACTGAAAAAGAGGCCA--AATCCACGAAT-AATCATTATACAATGGATAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469194 48 + 21915920 ACTGAAAAAGAGGTCA--AATCCATGAAT-AATCATTATACAATGGATAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044035 48 - 90373283 actgaaaaagaggcca--aatccatgaat-aatcattatacaatggataag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223295 48 + 4234846 actgaaaaagaggcca--aatccatgaat-aatcattatacaatggataag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227198 48 - 13750039 ACTGAAAAAGAGGCCA--AATCCATGAAT-AATCATTATACAATGGATAAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943170 50 + 50472720 actgatgaagataccaagaatccatgagt-agtcactgtacaatgaatggg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044336 50 + 13128814 actgatgaagataccaagaatccatgagt-aatcactgtacaatgaatggg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9621787 50 - 14377064 actgatgaagataccaagattccatgagt-aatcactgtacaatgaatggg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759463 50 + 9889416 actgatgaagataccaagaatccatgagt-aatcactgaacaatgaatggg i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1107370 49 + 2694913 actgaagaatatgtcaagaatccatgagt-aatcaccgtgcaatgacaga- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20761734 47 - 38779656 actgaaaaa---gacaagaatccatgagt-aattaccatgcaatgccaggg i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13837406 51 + 39895921 ACTGAAGAAGAGGTCAAGAATCTATGAGGAAATCACCGTGCAATGCCAAGG i canFam3.chr31 I 553 C 0 e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19209872 1266 + 47401472 I e mm10.chr16 78134314 752 + 98207768 I a score=3817829.000000 s hg38.chr21_KI270874v1_alt 105993 284 + 166743 caacattatatggtgatgattcaaccagtccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agatagagaatacacaaaaattttaaggtcacattgattatacagaaactcaaaattattcagaactccatgtcagagtggaggtagatggtaataaatatattcatttggtctagtttacaatggatgcaacaggg-catggaacaaccc--------------agtaagtccttcctctatctttcacattctattggaagagacatatttagtagttg s panTro5.chr21 3731203 284 + 33445071 caacattatatggtgatgattcaaccagtccttcttcacagaaacctctgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaattttaaggtcacattgattatacagaaactcaaaattattcagaactccatgtcagagtggaagtacatggtaataaatatattcatttggtctactttacaatggatgcaacatgg-catgggacaaccc--------------agtaagcccctcctctatctttcacattctattggaagagacatatttagtagttg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357017 284 + 46275980 caacattatatggtgatgattcaaccagtccttcttcacagaaacctccgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaattttaaggtcacattgattatacagaaactcaaaattattcagaactccatgtcagagtggaagtacatggtaataaatatattcatttggtctattttacaatggatgcaacatgg-catgggacaaccc--------------agtaagcccctcctctatctttcacattctattggaagagacatatttagtagttg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296418 283 - 13858734 caacattatatggtgatgattcaaccagttcttcttcacagaaacctctga-catttactcaggtaatcataaactgg---agaaagagaacacagaaaaattttaaggTCACATTGATTATACAGAAACTCAAAATTATTCAGAACTCCATGTCAGAGTGGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAATGGATGCAACAGGG-CATGGAACAACCC--------------AGTAAGTCCTTCCTCTATCTTTCACATTCTGTTGGAAGAGACATATTTAGTAGTTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479550 284 + 32716333 CAACATTATATGgtaatgattcaatcagtcctccttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaataattttaaggTCACATTGATTATACAGAAACTCAAAATTATTCAGAACTCCATGTCAGAGTGGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAATGGATGCAACAGGG-CATGGAACAACCC--------------AGTAAGCCCCTCCTCTATCTTTCACATTCTATTGGAAGAGACATATTTAGTAGATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434496 282 - 185818997 CAACATTATATGGTGATTATTCAACCAGCccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaatttt-TGGTCACATCGATTATACAGAAACTTAGAATTATTCAGCACTCCATGTCAGAGCAGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAACGGATGCAACA-GG-CATGGAACAACCC--------------AGTAAGCCCTTCCTCTATCTTTCAGTTTCTattggaatagacatatttagtagttg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162258813 282 - 192294377 caacattatatggtgatgattcaaccagcccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaatttt-tggtcacatcgattatacagaaacttagaattattcagcactccatgtcagagcagaggtacatggtaataaatatattcatttggtctagtttacaacggatgcaaca-gg-catggaacaaccc--------------agtaagcccttcctctatctttcagtttctattggaatagacatatttagtagttg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8739808 282 + 9440265 CAACATTATATGGTGATGATTCAACCAGCccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaatttt-TGGTCACATCGATTATACAGAAACTTAGAATTATTCAGCACTCCATGTCAGAGCAGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAACGGATGCAACA-GG-CATGGAACAACCC--------------AGTAAGCCCTTCCTCTATCTTTCAGTTTCTattggaatagacatatttagtagttg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469242 282 + 21915920 CAACACTATATGGTGATGATTCAACCAGCccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaatttt-TGGTCACATCGATTATACAGAAACTTAGAATTATTCAGCACTCCATGTCAGAGCAGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAACGGATGCAACA-GG-CATGGAACAACCC--------------AGTAAGCCCTTCCTCTATCTTTCACTTTCTattggaatagacatatttagtagttg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044083 283 - 90373283 caacattatatggtgatgattcaaccagcccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaattttaaggtcacattgattatacagaaactcagaattattcagaactccatgtcagagcagaggtacatggtaataaatatattcattgggtctagtttacaatggatgcaaca-gg-catggaacaaccc--------------agtaagcccttcctctatctttcactttctattggaatagacatatttagtagttg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223343 283 + 4234846 caacattatatggtgatgattcaaccagcccttcttcacagaaacctatgaccatttactcaggtaatcataaactgg---agaaagagaatacacaaaaattttaaggtcacattgattatacagaaactcagaattattcagaactccatgtcagagcagaggtacatggtaataaatatattcatttggtctagtttacaatggatgcaaca-gg-catggaacaaccc--------------agtaagcccttcctctatctttcactttctattggaatagacatatttagtagttg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227246 282 - 13750039 CAACATTATATGgtaatgattcaaccagtacttcttcacagaaatctatgaccatttactcaggtaatcataaactgg---agaaaaagaatacacaaaaatttt-AGGTCACATCGATTATACAGAAATTCAGAATTATTCAGAACTCCATGTCAGAGCAGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAATGGACGCAACA-GG-CATGGAGCAGCCC--------------AGTAAGCCCTTCCTCTATCTTTCACTTTCTattggaatagacatatttagtagttg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943220 284 + 50472720 caaaattacatggtgatgattcaaccagtccttcttcacagaaacctatgaccatttactcaggtaatcaaaaactgg---agaaagaaaaatcacaaaatttttaaggtcatattgATCATCCAGAAACTCAAAATCAACCAGAGCTCCATGTCAGAGTGGAGGTACATGGTAATAAATACATTCATTTGGTCTAGTTTACAATGGATGCAACAGGG-CACGGAACAACCC--------------AGTAAGCCCTTCCTCTGTCTTTCACACTCTATTGAAGTAGACATATGTAGTAGTTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044386 284 + 13128814 caacattatatggtgatgattcaaaccgtccttcttcacagaaacctatgaccatttactcaggtaatcataaactag---agaaagaaaaaccacaaaaattttaaggTCACATTGATCATCCAGAAACTCGAAATCATCCAGAGCTCCATGTCAGAGTGGAAGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAATGGATGCAACAGGG-CATGGAACAACCC--------------AGTAAGCCCTTCCTCTGTCTTTCACATTCTATTGAAGCAGACATATTTAGTAGTTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9621837 284 - 14377064 caacattatatggtgatgattcaaccagtccttcttcacagaaacctatgaccgtttactcaggtaatcataaactgg---agaaagaaaaatcacaaaatttttaaggTCACATTGATCATCCAGAAACTCAAAATGATCCAGAGCTCCATGTCAGAGTGGAGGTACATGCTAATAAATATATTCATTTGGTCTAGTCTACAATGGATGCAACAGGG-CATGGAACAACCC--------------AGTAAGCCCTTCCTCTATCTTTCACATACTATTGAAGTAGACATATTTAGTAGTTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759513 284 + 9889416 caacattatatgatgatgattcaaccagtccttcttcacagaaacctacgaccatttactcaggtaatcataaactgg---agaaagaaaaaccacaaaatttttaaggTCACATTGATCATCCAGAAACTCAAAATCATCCAGAGCTCCATGTCAGAGTGGAGGTACATGGTAATAAATATATTCATTTGGTCTAGTTTACAATGGATACAACAGGG-CATGGAACAACTC--------------AGTAAGCCCTTCCTCTGTCTTTCACATTCTATTAAAGTAGACATATTTAGTAGTTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211138 297 + 47401472 caacattacacagtgatgattcaaccagtccttcttcacaggaacctatgaccatttactcaggtattcacacactag---agcaagagaacactcagaaattttaagcttacattgatcatccagaaactcaaagtaattcaggactccatgtcagagctgagatacatggtaataaatagatt-actaggtccagttcacagtgggtgcagcaggg-aatggaataagcccattattggaatggaataatcatttcctctatccttcatgttatattggaatagacatacttggtagtcg i micMur3.chr31 I 1266 I 12 s proCoq1.NW_012144079v1 1107419 282 + 2694913 caacattacacagtgatgattcaaccagtccttc-tcacaggaacctatgaccatttactcagataatcacacactgg---agaaagagaatacccagaaatttcaagctcacattgatcatccaggaactcaaagtcattcaggactccatgtcagagc-gaggcacatggtaataaatagattccctaggtccagtttacagtgggtgcagcaggg-catggaataaccc--------------agtaatcatttcctctatccttcatgttatattgcagtagacatacttggtagtca i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20761781 266 - 38779656 taacattacatggtgacaatt------gt------tcacaggaacttacaaccatttactt-ggtaatcacacactgg---agaaagaa---tctcagaaattttaagCTCACCTTGATTATCCAAGAACTCAAAATCATTCACGAATTCATTTCAGAGTTGTGGTACATGGTAAGAAACAGATTCACTAGGTCCAGTT-ACAGTGAGTGCCATGGGG-AA-GGAGTAaccc--------------acaaatcatttcctccgtccttcaggttatattggaacagacatacttggtagtta i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13837457 280 + 39895921 CAACATTATATAgtaataattcaaccag---ttcttcacagaaatctacgcgcgttttctcaggtaattatacactggaaaaaaaagagaattcctagaaatgtcaaggTCATATTTATTATTCAGGAATGCAAATTCATCCAATACTCCATGCCTGAGTGAGCTCACACAGTAATAA----ATTCACTAGATATAGTTAACACTGGGTGCAAAGGGATCCTCAAGCAACTc--------------agtaatcatttcct-tacccttcattttatattagagtagacatacttggtattta i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78134314 752 + 98207768 I a score=161443.000000 s hg38.chr21_KI270874v1_alt 106277 15 + 166743 tctgacatcttccca-- s panTro5.chr21 3731487 15 + 33445071 tctgacatcttccca-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357301 15 + 46275980 tctgacatcttccca-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296701 15 - 13858734 TCTGACATCTTCCCA-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479834 15 + 32716333 TCTGACATCTTCCCA-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434778 15 - 185818997 tctgacatcttccca-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259095 15 - 192294377 tctgacatcttccca-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740090 15 + 9440265 tctgacatcttccca-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469524 15 + 21915920 tctgacatcttccca-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044366 15 - 90373283 tctgacatcttccca-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223626 15 + 4234846 cctgacatcttccca-- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227528 15 - 13750039 tctgatatcttccca-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943504 15 + 50472720 TCTGATATCTCCCCA-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044670 15 + 13128814 TCTGACATCTCCCCA-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622121 15 - 14377064 TCTGACATCTCCCCA-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759797 15 + 9889416 TCTGACATTTCCCCA-- i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1107701 15 + 2694913 gcagacacttccccc-- i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20762047 15 - 38779656 gacgacagttccccc-- i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 13837737 17 + 39895921 ggaaacaccctacccct i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3600868 26591 - 6883506 I e micMur3.chr31 19211435 12 + 47401472 I e mm10.chr16 78134314 752 + 98207768 I a score=903050.000000 s hg38.chr21_KI270874v1_alt 106292 67 + 166743 accccaggatttttgcttggcatttggaggcaagagatatca-cgggaaagacaaagtggat-acttct s panTro5.chr21 3731502 67 + 33445071 accccaggattgttgcttggcctttggaggcaagagatatca-cgggaaagacaaagtggat-acttct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357316 67 + 46275980 accccaggattgttgcttggcctttggaggcaagagatatca-cgggaaagacaaagtggat-acttct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296716 66 - 13858734 ACCCCAGGATTGTTGcttggccttt-gaggcaagagatatca-cgggaaagacaaagtggat-acttct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479849 67 + 32716333 ACCCCAGGATTGTTGcttggcctttggaggcaagagatatca-caggaaagacaaagtggat-acttct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434793 67 - 185818997 accccaggtttgttgcttgaccttcgggggcaagagatatca-tgggaaagacaaagtggaT-ACTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259110 67 - 192294377 accccaggtttgttgcttgaccttcgggggcaagagatatca-tgggaaagacaaagtggat-acttct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740105 67 + 9440265 accccaggtttgttgcttgaccttcgggggcaagagatatca-tgggaaagacaaagtggaT-ACTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469539 67 + 21915920 accccaggtttgttgcttgaccttcgggggcaagagatatca-tgggaaagacaaagtggaT-ACTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044381 67 - 90373283 actctaggtttgttgcttgaccttcgggggcaagagatatca-tgggaaagacaaagtggat-acttct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223641 67 + 4234846 accccaggtttgttgcttgaccttcaggggcaagagatatca-tgggaaagacaaagtggaT-ACTTCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227543 67 - 13750039 accccaggtttgttgcttgaccttcgggggcaagagatatca-tgggaaagacaaagtggaT-ACTTCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943519 65 + 50472720 ACCCCAGGTTTGTTGCTTGGCCTTTGGAGGCAAGAGATACCA-TAGGAA--ACAAAGTGGAT-ACTTCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044685 65 + 13128814 ACCCCAGGTTTGTTGCTTGGCCTTTGGAGGCAAGAGATATCA-TGGGAA--GCAAAGTGGAT-ACTTCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622136 65 - 14377064 ACCCCAGGTTTGTTGCTTGGCCTTTGGAGGCAAGAGATATCA-TGGGAA--ACAAAGTGAAT-ACTTCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759812 65 + 9889416 ACCCCAGGTTTGTTGCTTGGCCTTTGGAGGCAAGAGATATCA-TGGGAA--ACAAAGTGGAT-ACTTCT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211447 69 + 47401472 accccagattggttgtttggcctttggaagtaaaaggtatcagtgggaaagaccaagtagataaactct i micMur3.chr31 I 12 C 0 s proCoq1.NW_012144079v1 1107717 68 + 2694913 acctcagattggttgtttggcctttggaagtaaaaggtatcagtgggaaagaccaagtggat-acctct i proCoq1.NW_012144079v1 I 1 C 0 s otoGar3.GL873528 20762063 67 - 38779656 agcccagtttggttgtttggcccttgaaagtaagagatatcagcggg-aagaccaagtggat-acctct i otoGar3.GL873528 I 1 C 0 s canFam3.chr31 13837754 65 + 39895921 actccaggttggtgatttggactttggaagtaagaacca--a-tgggaaagaccaagtggat-acctct i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3600868 26591 - 6883506 I e mm10.chr16 78134314 752 + 98207768 I a score=761063.000000 s hg38.chr21_KI270874v1_alt 106359 60 + 166743 gTCCAGATAT-GACAATAAGTAGTTAGGCTGCTGGATagcctaagaagaaaatg--ataacca--- s panTro5.chr21 3731569 60 + 33445071 gTCCAGATAT-GACAATAAGTAGTTAGGCTGCTGGATagcctaagaagaaaatg--ataacca--- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357383 60 + 46275980 gTCCAGATAT-GACAATAAGTAGTAAGGCTGCTGGATagcctaagaagaaaatg--ataacca--- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296782 60 - 13858734 gTCCAGATAT-GACAATAAGTAGTTAGGCTGCTGGATagcctaagaagaaaatg--ataacca--- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479916 60 + 32716333 gTCCAGATAT-GACAATAAGTAGTTAGGCTGCTGGATAGCCTAAGAAGAAAATG--ATAACCA--- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434860 60 - 185818997 GTCCAGATAT-GGCAATAACTAGTTAGGCTGCTGGACAGCCTAGGAAGATAACG--ATAATCA--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259177 60 - 192294377 gTCCAGATAT-GGCAATAACTAGTTAGGCTGCTGGACAGCCTAGGAAGATAACG--ATAATCA--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740172 60 + 9440265 GTCCAGATAT-GGCAATAACTAGTTAGGCTGCTGGACAGCCTAGGAAGATAACG--ATAATCA--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469606 60 + 21915920 GTCCAGATAT-GGCAATAAGTAGTTAGGCTGCTGGACAGCCTAGGAAGATAATG--ATAATCA--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044448 60 - 90373283 gTCCAGATAT-GCCAATAAGTAGTTAGGCTGCTGAACAGCCTAAGAAGAAAACG--ATAACCA--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2223708 60 + 4234846 GTCCAGATAT-GCCAATAAGTAGTTACGCTGCTGAACAGCCTAAGAAGAAAACG--ATAACCA--- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227610 60 - 13750039 GTCCAGATAT-GGCAATAAGTAGTTAGGCTGCTGGACAGCCTAAGAAGAAAATG--ATAATCA--- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943584 60 + 50472720 GTCCAGATAC-AACAATAAGTAGTTAGGCTGTTGGATGGATTAAGAAGAAAATG--AGAGTGA--- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044750 59 + 13128814 GTCCAGATAC-AACAATAAGTAGTTAGGC-GCTGGATGGACTAAGAAGAAAATG--ATAGCCA--- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622201 60 - 14377064 GTCCAGATAC-AACAATAAGTAGTTAGGCTGCTGGATGGACTAAGAAGAAAATG--ATAGCCA--- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759877 60 + 9889416 GTCCAGAGAC-AACAGTAAGTAGTTAGGCTGCTGGATGGACTAAGAAGAAAATG--ATAGCCA--- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211516 60 + 47401472 gTCCAGATAT-GACAATAAGTAGTTAGGCTGCTGCGTAGTCTGAGAAAGGCATA--ATAACCA--- i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1107785 61 + 2694913 gTCCAGACATGGACAATAAGTAGTTAGGCTGCTGTGTagcctgagaaaggcata--ataacca--- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20762130 56 - 38779656 gTTCAGACAG-GACAGTAATTAGTT----TGCTGCATagcctgagaaaagcata--ataatta--- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13837819 53 + 39895921 gTCCAGATTT-CACTATAGGTAGTTAGGGGGCTGCCTGTCCTAAGAAGGACGTg------------ i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3627459 65 - 6883506 GCCAAGATTT-GCTAATAAGTAGTAAAGTGGCTCTTTGACTTGAGAAGGGCAGGGCATAGTGAGCA i dasNov3.JH568778 I 26591 C 0 e mm10.chr16 78134314 752 + 98207768 I a score=27335.000000 s hg38.chr21_KI270874v1_alt 106419 5 + 166743 gcagc s panTro5.chr21 3731629 5 + 33445071 gcagc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357443 5 + 46275980 gcagc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296842 5 - 13858734 gcagc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479976 5 + 32716333 GTAGC i nomLeu3.chr25 C 0 C 0 s manLeu1.NW_012102865v1 2223768 5 + 4234846 GCAGC i manLeu1.NW_012102865v1 C 0 I 663 s calJac3.chr21 21943644 5 + 50472720 GCAAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044809 5 + 13128814 GCAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622261 5 - 14377064 GCAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759937 5 + 9889416 GTAAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211576 5 + 47401472 GCAGC i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1107846 5 + 2694913 gaagc i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20762186 5 - 38779656 gaagt i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3627524 5 - 6883506 GTGGC i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13837872 0 + 39895921 C e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 227670 0 - 13750039 C e cerAty1.NW_012002954v1 8469666 0 + 21915920 C e macNem1.NW_012019910v1 8740232 0 + 9440265 C e chlSab2.chr2 15044508 0 - 90373283 C e macFas5.chr3 162259237 0 - 192294377 C e rheMac8.chr3 155434920 0 - 185818997 C a score=124187.000000 s hg38.chr21_KI270874v1_alt 106424 31 + 166743 tcat-agcccacaggggtg--agggtcaagatca s panTro5.chr21 3731634 31 + 33445071 tcat-agcccccaggggtg--agggtcaagatca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357448 31 + 46275980 tcat-agcccccaggggtg--agggtcaagatca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296847 31 - 13858734 tcat-agcccccaggggtg--agggtcaagatca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4479981 31 + 32716333 TCAT-AGCCCCCAGGGGTG--AGGGTCAAGATCA i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21943649 32 + 50472720 TCATaaacccccaggggaa--agggtcaagacca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044814 32 + 13128814 TCATAAACCCCCAGGGGAA--AAGGTCAAGACCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622266 34 - 14377064 TCATAAACCCCCAGGAAAATCCAACTCAAGACCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759942 32 + 9889416 TCATAAACCCCCAGGGGAA--AGGGTCAAGACCA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211581 31 + 47401472 TCAT-GGCTTTCAGGGGTG--AGGGTGAGGATCA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1107851 31 + 2694913 tcaa-agccttcaggggtg--aaggtgaggatca i proCoq1.NW_012144079v1 C 0 I 1669 s otoGar3.GL873528 20762191 31 - 38779656 ttat-caccttcaggagtg--aaggggaagatca i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13837872 10 + 39895921 ------------------------gtccggatta i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3627529 31 - 6883506 TCAT-AGTCCCCAGGGATG--AGGGTCAGCATCA i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 227670 0 - 13750039 C e cerAty1.NW_012002954v1 8469666 0 + 21915920 C e macNem1.NW_012019910v1 8740232 0 + 9440265 C e manLeu1.NW_012102865v1 2223773 663 + 4234846 I e chlSab2.chr2 15044508 0 - 90373283 C e macFas5.chr3 162259237 0 - 192294377 C e rheMac8.chr3 155434920 0 - 185818997 C a score=425923.000000 s hg38.chr21_KI270874v1_alt 106455 96 + 166743 cccactggattagccacctaggctagcaaaggtgctaaccaagagtgaagagaatcttgaatgggtagaagagaaataagagaataagtatcagtt s panTro5.chr21 3731665 96 + 33445071 cccactggattagccacctaggctagcaaaggtgctaaccaagagtgaagagaatcttgaatgggtagaagagaaataagagagtaagtatcagtt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357479 96 + 46275980 cccactggattagccacctaggctagcaaaggtgctaaccaagagtgaagagaatcttgaatgggtagaagagaaataagagagtaagtatcagtt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296878 95 - 13858734 cccactggattagccaccta-gctagcaaaggtgctaaccaagagtgaagagaatcttgaatgggtagaagagaaataagacaataagtatcagtt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4480012 96 + 32716333 CCCACTGGATTAGCCACCTAGGCTAGCAAAGGTGCTAACCAAGAGTGAAGAGAATCTTGAATGAGTAGAAGAGAAATAAGATAATAAGTATCAGTT i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21943681 96 + 50472720 cccactggattagccacctaggctagcaaagatgctagccaagagtgaagagaatcttgattgcagaaaagagaaataagacaataagtatcagtt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044846 87 + 13128814 CCCACTGGAATTGCCACCTAGGCTAGCAAAGATGCTAACCAAGAGTGAAGAAAATCTTGAATGTGTAAAAGAGAAATAAG---------ATTAATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622300 96 - 14377064 CCCACTGGATGAGCCACCTAGGCTAGCAAAGGTGCTAACCAAGAGTGAAGAGAATCTTGAATGTGTAAAAGAGAAATAAGACGATAAGTATCAGTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8759974 96 + 9889416 CCCACTGGATTAGTCACCTAGGCTAGCAAAGGTGCTAACCAATAGTGAAGAGAATCTGGAATGTGTAAAAGAGAAATAAGACAATAAGTATCAGTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211612 86 + 47401472 CCCACTGGACAAGCCACTTAGGCTAGCAAAGATGC----------TAACCAAGGTCTAGAATGGGTAGAAGAGAAGCAAGACAGTAAGTATAAGCT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20762222 86 - 38779656 ccgactaggcaacccatctaggatagcaaaggtgc----------tgaagagaatctggaatgggtagacagacggtaagacgggaagtatcagct i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13837882 84 + 39895921 cccatttgataaaccatctagaccagcaaaa------------agtgaagagaatctagaatgggtagaagatgagtagaacattaagtatcagtt i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3627560 79 - 6883506 TCTACTAGATAAGCAACCTAGTCCACCTAAA--------CACGGGTGAAGGGAATCCAAAATGAGTAG---------TAGACATTAAGTATTAGTT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1107882 1669 + 2694913 I e mm10.chr16 78134314 752 + 98207768 I e colAng1.NW_012120598v1 227670 0 - 13750039 C e cerAty1.NW_012002954v1 8469666 0 + 21915920 C e macNem1.NW_012019910v1 8740232 0 + 9440265 C e manLeu1.NW_012102865v1 2223773 663 + 4234846 I e chlSab2.chr2 15044508 0 - 90373283 C e macFas5.chr3 162259237 0 - 192294377 C e rheMac8.chr3 155434920 0 - 185818997 C a score=704910.000000 s hg38.chr21_KI270874v1_alt 106551 58 + 166743 gcagcctccagaca--agctattgcagcatca-gggctatTTTCAactacatatttaa--at--g- s panTro5.chr21 3731761 58 + 33445071 gcagcctccagaca--agctattgcagcatca-gggctatTTTCAactacatatttaa--gt--g- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357575 58 + 46275980 gcagcctccagaca--agctattgcagcatca-gggctatTTTCAactacatatttaa--at--g- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3296973 58 - 13858734 gcagcctccagaca--agctattgcagcatca-gggctatTTTCAactacatatttaa--at--g- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4480108 55 + 32716333 GCAGCCTCCAGACA--AGC---TGCAGCATCA-GGGCTATTTTCAactacatatttaa--at--g- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434920 55 - 185818997 GCAGCCTCCAGACA--AGC---TGCAGCATCA-GGGCTATTTTCAactgcatatttaa--at--g- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259237 55 - 192294377 GCAGCCTCCAGACA--AGC---TGCAGCATCA-GGGCTATTTTCAactgcatatttaa--at--g- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740232 55 + 9440265 GCAGCCTCCAGACA--AGC---TGCAGCATCA-GGGCTATTTTCAactgcatatttaa--at--g- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469666 55 + 21915920 GCAGCCTCCAGACA--AGC---TGCAGCATCA-GGGTTATTTTCAactgcatatttaa--at--g- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044508 55 - 90373283 GCAGCCTCCAGACA--AGC---TGCAGCATCA-GGGCTATTTTCAactgcatatttaa--at--g- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2224436 55 + 4234846 GCAGCCTCCAGACA--AGC---TGCAGCATCA-GGGCTATTTTCAACTGCAAAtttaa--at--g- i manLeu1.NW_012102865v1 I 663 C 0 s colAng1.NW_012120598v1 227670 55 - 13750039 GCAGCCTCCAGACA--AGC---TGCAGCATCA-GGGCTATTTTCAactgcatatttaa--at--g- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943777 57 + 50472720 gcagcctccagaca--agc---tgCAGCATCA-AGCCTATTTTCAACTACATTTTTAAATAT--G- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044933 57 + 13128814 GCAGCCTCCAGACA--AGC---TGCAGCATCA-AGGCTATTTTCAACTACGTATTTAAATAT--G- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622396 57 - 14377064 GCAGCCTCCAGACA--AGC---TGCAGCATCA-AGGCTATTTTCAACTACATATTTAAATAT--G- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8760070 57 + 9889416 GCAGCCTCCAGACA--AGC---TGCAGCATCA-AGGCTATTTTCAACTACATATTTAAATAT--G- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211698 56 + 47401472 GTAGCCTCCAGACC--AGC---TGCAGCAGCA-GGGCTGTTTTCAGttacatacttaa--at-ga- i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20762308 57 - 38779656 atagtctccagacc--agc---tgTGGAAGCA-GGGATGTTTTCAattatatatttaa--ttgga- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13837966 55 + 39895921 gtagtatcaaaacc--agc---tgcagcactg-gggTTTTTTCTGATTACATATTTAA--AT--G- i canFam3.chr31 C 0 I 117 s dasNov3.JH568778 3627639 57 - 6883506 --AACCTCAAGACACCAGT---GGCAGCATTGTGGGCTGTTTttgattacacatggca--ag--ga i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1107882 1669 + 2694913 I e mm10.chr16 78134314 752 + 98207768 I a score=1269933.000000 s hg38.chr21_KI270874v1_alt 106609 108 + 166743 ta-at-ggcttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------gatgtggtgatttgaaactttaaaat--------------------------------aatatatgtatcatggttgtggcttcc s panTro5.chr21 3731819 108 + 33445071 ta-at-ggcttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtggcgacttgaaactttaaaat--------------------------------aatatatggatcatggttgtggcttcc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357633 108 + 46275980 ta-at-ggcttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtggcgacttgaaactttaaaat--------------------------------aatatatggatcatggttgtggcttcc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3297031 108 - 13858734 ta-at-ggcttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtggtgacttgaaactttaaaat--------------------------------aatatatggatcatggttgtggcttcc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4480163 108 + 32716333 ta-at-ggcttggatatactgtgttaaaga-aaacatatt------------att-----aattttaactttt-----tt-------------aatgtggtgacttgaaactttaaaag--------------------------------aatatatggatcatggttgtggcttcc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155434975 105 - 185818997 ta-gt-ggtttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtagtgacttgaaattttaa-----------------------------------aatatatggatcatgttcgtggcttgc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259292 105 - 192294377 ta-gt-ggtttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtagtgacttgaaattttaa-----------------------------------aatatatggatcatgttcgtggcttgc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740287 105 + 9440265 ta-gt-ggtttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtagtgacttgaaattttaa-----------------------------------aatatatggatcatgttcgtggcttgc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469721 105 + 21915920 ta-gt-ggtttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtagtgacttgaaattttaa-----------------------------------aatatatggatcatgtttgtggcttgc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044563 105 - 90373283 tg-gt-tgtttggatatactatgttaaaga-aaatatatt------------att-----aattttaactttt-----ta-------------aatgtagtgacttgaaattttaa-----------------------------------aatatatggatcatgttcgtggcttgc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2224491 105 + 4234846 ta-gt-ggtttggatatagtgtgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtagtgacttgaaattttaa-----------------------------------aatatatggatcatgtttgtggcttgc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227725 105 - 13750039 tg-gt-ggtttggatatagtatgttaaaga-aaatatatt------------att-----aattttaactttt-----tt-------------aatgtagtgacttgaaattttaa-----------------------------------aatatatggatcatgttcatggtttgc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943834 110 + 50472720 TA-GTGGGtttggacatattgtattaaaga-aaatatatt------------act-----aattttaactttt----ttt-------------aatgtggtgacttcaaactttaaaat--------------------------------aatacatggctcatgtttgtggcttgc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5044990 109 + 13128814 TA-GTGGGtttggatatactgtattaaaga-aaatatatt------------act-----aattttaactttt----ctt-------------aatgtggtgacttaaaacttt-aaat--------------------------------aatatatggctcatgtttgtggcttgc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622453 110 - 14377064 TA-GTGGGtttggatatactgtattaaaga-aaatatatt------------gct-----aattttaactttt----ttt-------------aatgtggtgacttgaaactttaaaat--------------------------------aatatatggctcatgtttgtggcttgc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8760127 110 + 9889416 TA-GTGGGtttggatatactgtattaaaga-aaatatatt------------act-----aattttaactttt----ttt-------------aatgtggtgacttgaaactttaaaat--------------------------------aatatatggctcatgtttgtggcttgc i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211754 115 + 47401472 ta-gt-acttaggatatcgtgcattaaaga-aaatatatt------------attaaatcaattttaactttt-----tt-------------aatgtggttacttgaaactttaaaat------------------------------cacatatgtgggtcagttttgtggcttgc i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20762365 116 - 38779656 tatgt-gctttggctatagtgcattaaagg-aaatatatt------------acttaatcaattataactttt-----tt-------------catgtagctacttgacactttaaaat------------------------------cacatgtgtggctcatatttgtggcttgc i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13838138 113 + 39895921 ca-at-accttggatatatttcattaaaga-aagtatatc------------att-----aaattaaatttttaattttt-------------aatatggctacttgaaaatgtaaaac--------------------------------agcatgtgactcatatttgtggcttgc i canFam3.chr31 I 117 C 0 s dasNov3.JH568778 3627696 166 - 6883506 ta-at-attttagacatattgagttaaaaatacatacattataatattcaaaatt-----agttttctttttt-----ttaattattttttaaaatgtagctacttgaaaatttgaaatagcatatgtgaaataaataaataataaaataGCATATGTGGCTCACATTTGTGGCTTTC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1107882 1669 + 2694913 I e mm10.chr16 78134314 752 + 98207768 I a score=2115170.000000 s hg38.chr21_KI270874v1_alt 106717 164 + 166743 attacattcttattggacaAGTGTGCCCTATAATATCTACATATAACCAAAAT-------GTCATCTAAAACCT----CTAATAAAAATCCATCAGTTACTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACA--CTCTGCAGAAGAATAAACTACACAA s panTro5.chr21 3731927 164 + 33445071 attacattcttattggacaAGTGTGCACTATAATATCTACATTTAACAAAAAT-------GTCATCTAAAACCT----CTAATAAAAATCCATCAGTTACTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACA--CTCTGCGGAAGAATAAAGTACACAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357741 164 + 46275980 attacattcttattggacaAGTGTGCACTATAATATCTACATTTAACAAAAAT-------GTCATCTAAAACCT----CTAATAAAAATCCATCAGTTACTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACA--CTCTGCAGAAGAATAAAGTACACAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3297139 164 - 13858734 attacattcttattggacaAGTGTGCACTATAATATCTACATATAACAAAAAT-------GTCACCTAAAACCT----CTAATAAAAATCCATCAGTTACTAAATACATGTGTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACA--CTCTGCAGAAGAATAAAGTACACAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4480271 164 + 32716333 attacattcttattggacaAGTGTGCACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCT----CTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACG--CTCTGCAGAAGAATAAAGTACACAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155435080 168 - 185818997 attacattcttattggacaAGTGTACACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAATAAGATCTATTCA--------------GGTGGCCACA--CTCTGCAGAAGAATAAAGTACACAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259397 168 - 192294377 attacattcttattggacaAGTGTACACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAATAAGATCTATTCA--------------GGTGGCCACA--CTCTGCAGAAGAATAAAGTACACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740392 168 + 9440265 attacattcttattggacaAGTGTACACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAATAAGATCTATTCA--------------GGTGGCCACA--CTCTGCAGAAGAATAAAGTACACAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469826 168 + 21915920 attacattcttattggacaAGTGTGCACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACTTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAATAAGATCTATTCA--------------GGTGGCCACA--CTCTGCAGAAGAATAAAGTACACAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044668 168 - 90373283 attacattctttttggacaAGTGTGCGCTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------AGTGGCCACA--TTCTGCAGAAGAATAAAGTACACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2224596 168 + 4234846 attacattcttattggacaAGTGTGCACTATAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAATAAGATCTATTCA--------------GGTGGCCACA--CTCTGCAGAAGAATAAAGTACACAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227830 168 - 13750039 attacattcttattggacaagtgtgcgctgTAATATCTACATATAACAAAAAT-------TTCATCTAAAACCTCTAACTAATAAAAATCTATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCATA--CTCTGCAGAAGAATAAAGTATGCAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21943944 167 + 50472720 agtacattcttattggacaAGTGTGCTCTATAATATCTACATATAACAAAAAT-------TTCAACTAAAATCTCTAACT-ATAAAAAGCCATCAGTTGCTAAATACATGTTTTGTAGCTGACAGAGTAAGATCTATTTA--------------GGTGGCCACA--TTCTGCAGAAGAATAAAGTATATGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5045099 167 + 13128814 attacattcttattggacaAGTGTGCTCTATAATATCTACATATAACAAAAAT-------TTCAACTAAAATCTCTAACT-ATAAAAAGCCATCAGTTGCTAAATACATGTTTTGTAGCCGACAGAGTAAGATCTGTTCA--------------GGTGGCCACA--TTCTGCAGAATAATAAAGTATATGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622563 167 - 14377064 attacattcttattggaTGAGTGTGCTCTGTAGTATCTACATATAACAAAAAT-------TTCAACAAAAATCTCTAACT-ATAAAAAGCCATCAGTTGCTAAATACATGTTTTGTAACTGACAGAGTAAGATCTATTCA--------------GGTGCCCACA--TTCTGCAGAAGAATAAAGTATATGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8760237 167 + 9889416 attacattcttattggacaAGTGTGCTCTATAATATCTACATGTAACAAAAAT-------TTCAACTAAAATCTCTAACT-ATAAAAAGGCATCAGTTGCTAAATACATATTTTGTAGCTGACAGAGTAAGATCTATTCA--------------GGTGGCCACA--TTCTGCAGAAGAATAAAGTATATGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19211869 170 + 47401472 attttattactattggtcagGTTTGCTCTATAATATTTACATGTAATCAAAAT-------TTCACCTAAGCCCTCTCACCAATGAAACGCCACCAGTTGCTAAATACATGTGATGTAGCAGATAGATCAAGAGCTATTCA--------------GTAAGAGCCATGGTCTGCAGGGGAATCGAATGCATAA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20762481 169 - 38779656 attacattactattggacagGTTCGTTGTATAACAGTTTCATGTAACAAAAAT-------TTCACCTAAACCCTCTCACCAATAAAAAGCCATCAGACGCTAAATAGATGTGATGCAGCTGATCGAGGAAGAGCTATTCA--------------GTAAGCAGTA-GGTCTGCAGGGAAATGAAACACAAAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78135066 189 + 98207768 ATTATATTTCCATTGGACCGGATTGTTCAACAATATCTGTATGCAGAAGTAATTCACTTCTTGGTTAAAAACCTTTAACCGGTATGAAGTCATCGATGGCTAGATGTCTATGACGTAGCTAATAAATTAAAAGCTATTCAAAAAAGAGAGAGAGAGAGCCCACT--GTCTACAAAGAAAGAGAATACACAA i mm10.chr16 I 752 I 8 s canFam3.chr31 13838251 143 + 39895921 attatatttct----GAAAAGTTTGTTTTATCATATCTGCAGGAAACAAAAAC-------TGCATC-----------------AGGAAGCCATCAGTTGCTAAACACATATGATTTAACCAATGGAGTAAGAGTTAGTTA--------------GGTAGCCATG--GTGTTTGG--GGAGAAAGCACAA-- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3627862 159 - 6883506 AACATATTTGAATGGGACAAGGTTGCTCTCTAATATTTGCATGCAACATACAG-------TTGACATAAAACCTATAACCAATAAGAAGCTGTTAGTTGCTAAATATATGTGAGTTAGCCAGCAGAATAAG-----------------------AGTGATCTTG--GTCTGCAATAGAGGAAAGTGTGTAT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1107882 1669 + 2694913 I a score=2732480.000000 s hg38.chr21_KI270874v1_alt 106881 186 + 166743 TGCAAGCTAATGAGAATCTGAAAAAGGAAAACAT---------------------------CCTTTCAGCCAATTCCTTTCTCCCTCTTTAGAGG------------------------------------------------------------AATAGCATAAGTACTACCCGTGAAAC-AGGACAGAAAG--CTGCAGGAATATGATTAT-TTATAATTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------AAAACCTATAT s panTro5.chr21 3732091 186 + 33445071 TGCAAGCTAATGAGAATCTGAAAAAGGAAAACAT---------------------------CCTTTCAGCCAATTCCCTTCTCCCTCTTTAGAGG------------------------------------------------------------AATAGCATAAGTACTACCCATGAAAC-AGGACAGAAAG--CTGCAGGAATATGATTAT-TTATAATTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------AAAACCTATAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17357905 186 + 46275980 TGCAAGCTAATGAGAATCTGAAAAAGGAAAACAT---------------------------CCTTTCAGCCAATTCCCTTCTCCTTCTTTAGAGG------------------------------------------------------------AATAGCATAAGTACTACCCATGAAAC-AGGACAGAAAG--CTGCAGGAATATGATTAT-TTATAATTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------AAAACCTATAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3297303 186 - 13858734 TGCAAGCTAATGAGAATCTGAAAAAGGAAAACAT---------------------------CCCTTCAGCCAATTCCCTTCTCCCTCTTTAGAGG------------------------------------------------------------AATAGCATAAGTACTACCTGTGAAAC-AGGACAGAAAG--CTGCAGGAATATGATTAT-TTATAATTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------AAAACCTATAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4480435 185 + 32716333 TGCAAGCTAAGGAGAATCTGAAAAAGGAAAACAT---------------------------CCTTTCAGCCGATTCCCTGCTCCCTCTTTAGAGG------------------------------------------------------------AATAGCATAAGTACTACCCATG-AAC-AGGACAGAAAG--CTGCAGGAATATGATTAT-TTATAATTTTAAAAGTTCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------AAAACCTATAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155435248 184 - 185818997 TGCAAGCTAATGAGAATCTGAAAAAGG-AAACAT---------------------------CCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGG------------------------------------------------------------AACAGCATAAGTACCACCCATGAAAT--GGACAGAAAG--CTGCAGGAATATGATTAT-TTATAACTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------CAAACCTGGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259565 184 - 192294377 TGCAAGCTAATGAGAATCTGAAAAAGG-AAACAT---------------------------CCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGG------------------------------------------------------------AACAGCATAAGTACCACCCATGAAAT--GGACAGAAAG--CTGCAGGAATATGATTAT-TTATAACTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------CAAACCTGGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740560 184 + 9440265 TGCAAGCTAATGAGAATCTGAAAAAGG-AAACAT---------------------------CCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGG------------------------------------------------------------AACAGCATAAGTACCACCCATGAAAT--GGACAGAAAG--CTGCAGGAATATGATTAT-TTATAACTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------CAAACCTGGAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8469994 244 + 21915920 TGCAAGCTAATGAGAATCTGAAAAAGG-AAACAT---------------------------CCTTTCAGCTGATTCCCTTCTCCCTCTTTAGAGGAATAGCATAAGTACCACCCATGAAACAGACAGAAAGCTGCAGGAATCTGATTATTTATGTAATAGCATAAGTACCACCCATGAAAC--GGACAGAAAG--CTGCAGGAATATGATTAT-TTATAATTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------CAAACCTAGAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15044836 185 - 90373283 TGCAAGTTAATGAGAATCTGAAAAAGGAAAACAT---------------------------CCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGG------------------------------------------------------------AATAGCATAAGTACCACCCATGAAAC--GGACAGAAAG--CTGCAGGAATATGATTAT-TTATAACTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------CAAACCTGGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2224764 244 + 4234846 TGCAAGCTAATGAGAATCTGAAAAAGG-AAACAT---------------------------CCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGGAATAGCATAAGTACCACCCATGAAACAGACAGAAAGCTGCAGGAATATGATTATTTATGTAATAGCATAAGTACCACCCATGAAAC--GGACAGAAAG--CTGCAGGAATATGATTAT-TTATAATTTTAAAAGATCATGAGACTCTGTCTT-AGATGCTTTATCTGAACTC-------CAAACCTAGAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 227998 185 - 13750039 TGCAAGTTAATGAGAATCTGAAAAAGGAAAACAT---------------------------CCTTTCAGCCGATTCCCTTCTCCCTCTTTAGAGG------------------------------------------------------------AATGGCATAAGTACCACCCATGAAAC--GGACAGAAAG--CTGCAGGAATATGATTAT-TTATAATTTTAAAAGATCATGAGACTCTGTCTT-CGATGCTTTATCTGAACCC-------CAAACGTAGAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21944111 186 + 50472720 CACAAGCTAATGAGAATCTAAAAAAGGAAAACAT---------------------------CCTTTCAGCCAATTGTTTTCTCCCTCTTTAGAGA------------------------------------------------------------AATGGCATAGGTACCACCCATGAAAC-AGGACAAAAAG--CTGCAGGGATATGATTAT-TTGTAATTTTAAAAGATCATGAGACTCTTTTCT-AGGTGCTTTGTCTGAACTG-------CAGACCTATAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5045266 186 + 13128814 CACAAGCTAATGAGAATCTAAAAAAGGAAAACAT---------------------------CCTTTCAGCCAATCGCTTTCTCCCTCTTTAGAGA------------------------------------------------------------AATGGCATAAGTAACACCCATGAAAC-AGGACAGAAAG--CTGCAGGGATATGATTAT-TTGTAATTTTAAAAGACCATGAGACTCTTTCCT-AGGTGCTTTGTCTGAACTC-------CAGACCTATAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622730 186 - 14377064 CACAAGCTAATGAGAATCTAATAAAGGAAAACAT---------------------------CCTTTCAGCCAATTGCTTTCTCCCTCTTTAGAGA------------------------------------------------------------AATGGCATAAGTACCACCCATGAAAC-AGGACAGAAAG--CTGCAGGGATATGATTAT-TTGTAATTTTAAAAGACCATGAGACTCTTTCCT-AGGTGCTTTGTCTGAACTC-------CAGACCTATAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8760404 186 + 9889416 CACAAGCTAATGAGAATCTAAAAAAGGAAAACAT---------------------------CCTTTCAGCCAATTGCTTTCTCCCTCTTTAGAGA------------------------------------------------------------AATGGCATAAGTACCACCCATGAAAC-AGGACAGAAAG--CTGCAGGGATATGATTAT-TTGTAATTTTAAAAGATCATGAGACTCTTTCCT-AGGTGCTTTGTCTGAACTC-------CAGACCTATAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19212039 187 + 47401472 TGCAAGCTAATGAGAATCTGAAAAAGgaaaacat---------------------------ccttccagctgatttctttcttcctctttaaaag------------------------------------------------------------tatggcataagtgccacccataaaaT-AGGACACGAGG--CTGCAGAGATATGATTATATCATAATTTTTAAAGATCATGGGAATCTTTTCT-AAATGCTTTATCTGAACTC-------AAAACCTACAT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1109551 187 + 2694913 TGCAAGCTAATGAGAATCTGAAAAAGAAAAATAT---------------------------TCTTCCAGCTGATTTCTTTCTTCCTTTTTAAAAG------------------------------------------------------------TGTGGCATAAATACCACCCATGAAAT-AGGACAGGAGG--CTGCAGAGATACGATTATATCATAATTTTTAAAGATCATGGGAATCTTTTCT-AAACGCTTTATCTGAACTC-------AAAACCTACAT i proCoq1.NW_012144079v1 I 1669 C 0 s otoGar3.GL873528 20762650 215 - 38779656 TGCAAGCTAATGAGAATCTGAAATAGGAAAAGGCAGCACCTTTGCTGGCCTAGCTGGGAGGCTTCCTAGCTGATTTCGTTCTTCCTCTTTAGAAG------------------------------------------------------------TGTGGCATAAGTTCCGCCCATGCGAT-AAGACAGGAAG--CTACAGAGATATGATTATATCAGAGCTATTACAGATCATGGGAATTTTTTTTGAGATGCTTTATCTGAACGC-------AAAGCCCACAT i otoGar3.GL873528 C 0 I 1 s mm10.chr16 78135263 178 + 98207768 TACAAATTAGTCAGGAGCTGAAAAAGGAAAACAC---------------------------CCTTCCAGCTTATTGGTTTATCTCTTTTC-----------------------------------------------------------------TCT----------CCAAGCATGAAAC-AGAAAGAGAAGTTCTGCAGAGATAGCATT---TCATAATCTCAAAACATCATGGGATTACTTCCT-TAATATGTTACCAAAACTCAGAAGTTCAAACCTACAT i mm10.chr16 I 8 C 0 s canFam3.chr31 13838394 182 + 39895921 -----TCTATTGAGAAACTGAAAAAGGAAAATAT---------------------------CCTTCCAGCTGACTCCTTTCTTCCTCTTTATAGG------------------------------------------------------------CGTGGCATAAATGCCACCCATGAAGCTAGGATAGATA---CTGCAGAGATCTGATTATTTCATAATTTTAAAACATCATGGGAATCTTCCCT-AAATGCTTTGTCTGAACTC-------AAAATCTATAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3628021 183 - 6883506 TACAAGCTAATTGGAA-CTGAAAAAGGAAAACAT---------------------------CTTTCCAACTGGTTGCTTTCTCTCTATGT--AGG------------------------------------------------------------CATGGCAAAAAGACCAC-CATGAAGT-AGGAGAGGAGG--CTGTAAAGATCTGCTTATTTCAAAATTTTAAAAGATTATAAGACTCTTTCCT-AAATGCTTTGCCTGAACTC-------AAAATATGTAT i dasNov3.JH568778 C 0 C 0 a score=21000.000000 s hg38.chr21_KI270874v1_alt 107067 1 + 166743 C s panTro5.chr21 3732277 1 + 33445071 C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358091 1 + 46275980 C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3297489 1 - 13858734 C i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4480620 1 + 32716333 C i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155435432 1 - 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259749 1 - 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740744 1 + 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8470238 1 + 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045021 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225008 1 + 4234846 C i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 228183 1 - 13750039 C i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21944297 1 + 50472720 C i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5045452 1 + 13128814 C i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622916 1 - 14377064 C i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8760590 1 + 9889416 C i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19212226 1 + 47401472 C i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1109738 1 + 2694913 C i proCoq1.NW_012144079v1 C 0 C 0 s mm10.chr16 78135441 1 + 98207768 C i mm10.chr16 C 0 C 0 s canFam3.chr31 13838576 1 + 39895921 C i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3628204 1 - 6883506 C i dasNov3.JH568778 C 0 C 0 e otoGar3.GL873528 20762865 1 - 38779656 I a score=1730350.000000 s hg38.chr21_KI270874v1_alt 107068 115 + 166743 CATATCACCACATCACACAACTATATCTGCAGCAGTTGAATCTGTTCAGATTGTAGAGGGTCCTGCAGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAGAGCTCACAGT s panTro5.chr21 3732278 115 + 33445071 CATATCACCACATCACACAACTATATCTGCAGCAGTTGAACCTGTTCAGATTGTAGAGGGTCCTGCAGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAGAGCTCACAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358092 115 + 46275980 CATATCACCACATCACACAACTATATCTGCAGCAGTTGAACCTGTTCAGATTGTAGAGGGTCCTGCAGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAGAGCTCACAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3297490 115 - 13858734 CATAACACCACATCACACAACTATATCTGCAGCAGTTGAACCTGTTCAGATTGTAGAGGGTCCTGCAGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAGAGCTCACAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4480621 115 + 32716333 CACATCACCACATCCCACAACTATATCTGCAGCAGTTGAACCTGTTCAGATTGTAGAGGGTCCTGCAGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAGAGCTCACAGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155435433 115 - 185818997 CATATCACCACATCACACAACTATATCTGCGGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAAAGCTCAAAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259750 115 - 192294377 CATATCACCACATCACACAACTATATCTGCGGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAAAGCTCAAAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740745 115 + 9440265 CATATCACCACATCACACAACTATATCTGCGGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAAAGCTCAAAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8470239 115 + 21915920 CATATCACCACATTACATAACTATATCTGCAGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAAAGCTCAAAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045022 115 - 90373283 TATATCACCACATCACACAACTATATCTGCAGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAAAGCTCAAAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225009 115 + 4234846 CATATCACCACATTACATAACTATATCTGCAGCAGTTGAACCTGTTTAGATTGCAGAGGGTCCTACCGAGCT-GCATGCATGG-----GGAAAATGCATCCTAAAAGTGAAAGCTCAAAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 228184 115 - 13750039 CATATCACCACATCACACAACTGTATCTGCAGCAGTTGAATCTGTCTAGATTGCAGAGGGTCCTACCGAGCT-GCATGCATGG-----AGAAAATGCATCCTAAAAGTGAAAGCTCAGAGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21944298 115 + 50472720 AATATCACTACATCACACAACTATATCTGCAGCAGTTGAACCTGTTTAGATTGTAGAGGGTCCTACAGATCT-GCATGCATGG-----AGAAAGTGCATTCTAAAAGTGAAAGATCAAAGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5045453 115 + 13128814 AATATCACTACGTTACACAACTATATCTGCAGCAGTTGAACCTGTTCAGATTGTAGAGGGTCCTACAAAGCT-GCATGTACAG-----AGAAAATGCATTCTAAACGTGAAAGCTCAAAGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9622917 115 - 14377064 AATATTACTACATCACACAACTGTATCTGCAGCAGTTGAACCTGTTTAGATTGTAGAGGGTCCTACAGAGCT-GCATGCATGG-----AGAAAATGCATTCTAAAAGTGAAAGTTCAAAGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8760591 115 + 9889416 AATATCACTACATCACACAACTATATCTGCAAAGGTTGAACCTGTTTAGATTGTAGAGGGTCCTACAGAGCT-GCATGCATGG-----AGAAAATGCATTCTAAAAGTGAAAGCTCAAAGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19212227 117 + 47401472 CATATCACCACATCAAACAACTATCTCTGCAGCAGTTGAACCTGTTGGGATTG----AGCTCCTACAGAGCTCTCATACATGGTTTTAAAAAAATGCACCTTGACAATGAAAGATCAAAAT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1109739 117 + 2694913 CATATCACCACGTCAAACAACTATCTCTGTAGCAGTTGGACCTGTTCAGATTGTAGAGGTTCCTACAGAGCTCTCATACATGG----AGAAAAATGTACTTTCAAAGTGAAAGCTCAAAAT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20762866 115 - 38779656 CATGTCACCACATCAAACAACAACCT-TGCAACTGTTGGACTTACTCAGATTGAAGAGGTTCCTACAGAGCT-GCAGACGTGG----AGGAAAATGCACCTTGACAGTGAAAGCTCAAAGC i otoGar3.GL873528 I 1 I 335 s mm10.chr16 78135442 115 + 98207768 AGCGTCATTCTATCAAGCAAAGACCTCTACAGCAACTGTACTGAGTCAGATTTTAAAAGGTTCGACAGAGAT-GCGTGTTTCA-----AGGAAACACGTCTTTAAAATGAAAGTTCTAACT i mm10.chr16 C 0 C 0 s canFam3.chr31 13838577 113 + 39895921 CATATCACTTCAACAAACAAATATCTCTGCAGCCATTTGACCTGTCTAGATTGTAGAGGATCCTACAGGTCT-GCATATATG------AGGAAATGCATCTTAAAA-TGAAAGCTCTAAAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3628205 104 - 6883506 TGTACCATAATTTC-----------TCTGCAGCAGTTGGACCTGTTTACATTACAGAGGATCTTGCAAATCT-GTTTAAACTG-----AGGAAATGTATCTTCAAAATGTAAGTTCTAAAT i dasNov3.JH568778 C 0 C 0 a score=11106504.000000 s hg38.chr21_KI270874v1_alt 107183 660 + 166743 AAGATATGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAAAATTATGTGCAGTA-----ATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATT---ATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTCATGTTGCCAAAATGTATTAAATTTCTCCTCTACGATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CATTGTGTCACAG-AAAAATAATCGTGCAAGAAAAGGTTGAATTTGTATAATGTAGAACTGAAGAAAATTATTTT-AATATTCC-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGAATATTCTATCAAGCTGTAAAAATCCAGTTTCCATGGTACTA-TAATTAATAAA--ATGTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTGTTCAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT s panTro5.chr21 3732393 664 + 33445071 AAGATATGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAAAATTATGTGCAGTA-----ATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTCATGTTGCCAAAATGTATTAAATTTCTCCTCTACGATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CATTGTGTCACAG-AAAAATAATCGCGCAAGAAAAGGTTGAATTTGTATAATGTAGAACTGAAGAAAATTATTTT-AATATTCCAAAAAATC------ATACATCCATTTAGCAGGTAATATGGAATATTCTATCAAGCTGTAAAAATCCAGTTTCCATGGTACTA-TAATTAATAAA--ATGTATAGTTAGTAAACCCGTCTATGCATACTGTTTATTTTAGTATTGTTCAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358207 664 + 46275980 AAGATATGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAAAATTATGTGCAGTA-----ATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTCATGTTGCCAAAATGTATTAAATTTCTCCTCTATGATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CATTGTGTCACAG-AAAAATAATCGCACAAGAAAAGGTTGAATTTGTATAATGTAGAACTGAAGAAAATTATTTT-AATATTCCAAAAAATC------ATACATCCATTTAGCAGGTAATATGGAATATTCTATCAAGCTGTAAAAATCCAGTCTCCATGGTACTA-TAATTAATAAA--ATGTATAGTTAGTAAACCCGTCTATGCATACTGTTTATTTTAGTATTGTTCAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3297605 662 - 13858734 AAGATATGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCATTCATCCACCATAAAATTATGTGCAGTA-----ATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTCATGTTGCTAAAATGTATTAAATTTCTCCTCTACGATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAACGGCTTTGCATAATCATC-CATTGTGTCACAG-AAAAATAATCGCGCAAGAAAAGGTTGAATTTGTATAATGTAGAACTGAAG-AAATTATTTT-AATACTCC-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGAATATTCTATCAAGCTGTAAAAATCCAGTTTCCATGGTACTA-TAATTAATAAA--ATGTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTGTTCAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4480736 648 + 32716333 AAGATACGATCATTACATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTTGGTCATCCACCATAAAATTATGTGCCGTA-----ATCTCCATTTCTGGATATGGAATGCTAAATAGCAATATATAAACAAACAATATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCAAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATATCACTGAGCAATTCACTTACATAAATG---------------C-CATTGTGTCACAG-AAAAATAATCACGCAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCC-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGAATATTCTATCAAGCTGTAAAAATCCAGTTTCCATGGTACTA-TAATTAATAAA--ATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATCATTTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155435548 663 - 185818997 AAAATATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAACATTATGTGCTGTG-----ATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCAAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACCGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CGTTGTGTCACAG-AAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCT-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTTAAAATCCAGTTTCCACCGTACTA-TAATTAATAAA--ATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162259865 663 - 192294377 AAAATATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAACATTATGTGCTGTG-----ATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CGTTGTGTCACAG-AAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCT-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTTAAAATCCAGTTTCCACCGTACTA-TAATTAATAAA--ATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8740860 663 + 9440265 AAAATATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAACATTATGTGCTGTG-----ATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAACATTAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CGTTGTGTCACAG-AAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCT-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTTAAAATCCAGTTTCCACCGTACTA-TAATTAATAAA--ATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8470354 663 + 21915920 AAAATATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAACATTATGTGCTGTA-----ATCTCCATTTCTGGATATGGATTGCTAAATAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAACCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTTCTTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CGTTGTGTCACAG-AAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCT-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTTAAAATCTAGTTTCCACTGTACTA-TAATTAATAAA--ATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTGTTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045137 663 - 90373283 AAGATATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAAAATTATGTGCTGTA-----ATCTCCATTTCTGGATATGGATTGCTTAAGAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCAACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CGTTGTGTCACAG-AAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAATGTGTAACTGAAGAAAATTATTTT-AATATTCT-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGGATATTCCATCAAGCTGTTAAAATCCAGTTTCCACTGTACTA-TAATTAATAAA--ATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225124 649 + 4234846 AAAGTATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAACATTATGTGCTGTA-----ATCTCCATTTCTGGAT--------------AGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTACCACTTCTGAACTGAAGCCAATTATAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CGTTGTGTCACAG-AAAAATAACTGCACAAGAAAAGGTTGGATTTGTATAATGTGGAACTGAAGAAAATTATTTT-AATATTCT-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTAAAAATCCAGTTTCCACGGTACTA-TAATTAATAAA--ATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTGTTCTCTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 228299 667 - 13750039 AAGGTATGGTCATTATATTTTAGAAACAAAGTTTAAAATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAAAATTATGTGCTGTGCTGTAATCTCCATTTCTGGATATGGATTGCTAAATAGCAATGTATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAATTGAAGCCAATTACAATGACATCACCCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTGTGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTATTCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGGTAATACCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CGTTGTGTCACAG-AAAAATAACTGCACAAGAAAAGGTTGAATTTGTATAACGGGGAACTGAAGAAAATTATTTT-AATATTCT-AAAAATC------ATACATCCATTTAGCAGGTAAGATGGGATATTCTATCAAGCTGTAAAAATCCAGTTTCCACCATACTA-TAATTAATAAA--ATTTATAGTTAGTAAACCCATCTATGCATACTGTTTATTTTAGTATTCTCTAAGTG---AAAGTCACTCTGCCCATTAAATCAAAAATAAAA-T i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21944413 653 + 50472720 AAGATATGATCATTGCACTTTAGAAACAAAGTTT-ATATAAAATAG-TGACCACAATATTCAGTCATCCACCATAAAATGATGTGCTGTG-----AT---TACATCTGGATACGGATAGCTAAATAGTAATATATAAACAAACAACAGCCAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTAAAGCCGATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCCACAATTTGTC--TTATCCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-GCTTGTGTCACAG--AAAAAAATCGTGCAAGAAAAGGTTGAGTTTGTATGATGTGGAACTGAAGGAAATTATTTT-AATATTCT-AAAAATC------ATGCCTCCACTTAGCATGTAAGATGGAATATTCTGTCATGCTGTAAAAATCCAGTTACCACGCTACTA-TAATTATTAAA--ATTTATAGTTAGTAAACTCATCTAGGCCTACTG-----TTTAGTATTCTGTAAGTG---AAAGTCACTCTGTCCATTAAATCAAATATATAAGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5045568 653 + 13128814 AAGATATGGTCATTGCACTCTAGAAACAAAGTTT-ATATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAAAATTATGTGCTGTG-----AT---TACATCTGGATATGGATAGCTAAATAGTAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTAAAGCCAATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCCACAATTTGTC--TTATCCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCATTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-CCTTGTGTCACAG--AAAAAAATCGTGCAAGAAAAGGTTGAGTTTGTATAATGTGGAACTGAAGGGAATTACTTT-AATATTCT-AAAAATC------ATACCTCCACTTAGCATGTAAGATGGAATATTCTATCATGCTGTAAAAATCCAGTTTTCACACTACTA-TAATTATTAAA--ATTTATAGTTAGTAAACTCATCTATGCCTACTG-----TTTAGTATTCTGTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623032 653 - 14377064 TAGATATGGTCATTGCACTTTAGAAACAAAGTTT-ATATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAAAATTATGTGCTGTG-----AT---TACATCTGGATATGGATAGCTAAATAGTAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCACTTCTGAACTAAAGCCAATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTGACCTTCCTACTTAAGTTGCCAAAATGTATTAAATTTCTCCTCCACAATTTGTC--TTATCCCCTTTGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAGCCTACAATTTTGGCTGATAATATCACTGAGCAATTCACTTACATAAATGG-TTTGCATAATCATC-CCTTGCATCACAG-AAAAAAAATCATGCAAGAAAAGGTTGAGATTTTATAATGTGGAACTGAAGGAAATTATTTT-AATATTCT-AAAAATC------ATACCTCCACTTAGCATGTAAGATGGAATATTCCATCATGCTGTAAAAATCCAGTTTCCACACTACTA-TAATTATTAAA--ATTTATAGTTAGTAAACTCATCTATGCCTACTG-----TTTAGTATTCTGTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8760706 653 + 9889416 AAGATATGGTCATTGCACTTTAGAAGCAAAGTTT-ATATAAAGCAG-TGACCACAATATTCAGTCATCCACCATAAAATTATGTTCTGTG-----AT---TACATCTGGACATGGATAGCTAAATAGTAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACTCTGCCGCTTCTGAACTAAAGCCAATTATAATGACATCACTCGAGCTTCTTGTCCTTTGCTAACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCCACAATTTGTC--TTATCCCCTTCGTCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACTGAGCAATTCACTTACATAAATGGCTTTGCATAATCATC-TCTTGTGTCACAG--AAAAAAATTGTGCAGGAAAAGGTTGAGTTTGTATAATGTGGAACTGAAGGAAATTATTTT-AATATTCT-AAAAATC------ATACCCCCACTTAGCATGTAAGATGGAATATTCTATCATGCTGTAAAAATCCAGTTTCCACGCTATTA-TAATTATTAAA--ATTTATAGTTAGTAAACTCATCTATGCCTACTG-----TTTAGTATTCTGTAAGTG---AAAGTCACTCTGTCCATTAAATCAAAAATAAAAGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19212344 669 + 47401472 AAGACAAAGTCATTGCATTTTAGAAACAAAGTTTAAAATAATGCCA-TAACCACAATATTCAGTCATCCACCATAAAATTATCTGCTGTA-----ATCTCCACTTTGGGATATGGATAGCTAAATAGCAATATATAAAC-AACAACATCAAAGTGCCTTTTTGGCTAACTGCCACCCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCTAGCTTCATATCCTTTGCTGACCTTCCTATTTATGTTGCCAAAATGTATTAAATTTCTCTTCTACAATTTGTC--TTTTTCCCTTTGTCTTTTGTTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACTAAGCAATTCACTTACACAAATGGCTTTGCATAATCATC-TGTTGTGTCACAG--GAAAAAGTCATGCAAGAAAAAGTTGAATTTGTATGGCATGGAACTGAAGAAAATTCCTTTAAATATACT-AAAAATCATATTAATACCTCCATTTAGCAGGTAACATGTGATGTTCTAGCAAGCTATAGAAATCCAGTTTCCATGATACTA-TAATTATAAAA--ATTTATGGTTAGTAAACCCAATTACATATACTGCTTATTTTAGTATTCTTTAACTA---AACCTCTCTCTGTCCACTAAATTGAAAATAAAAGT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1109856 669 + 2694913 AAGACAAAGTCATTGCATTTTAGAAACAAAGTTTAAAATAATGCCA-TAACCACAATATTCAGTCATCCACCATAAAATTATCTGTTGTA-----ATCTCCACTTTGGGATAGGGATAGCTAAATAGTGATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACCCTGCCACTTCTGAACTGAAGCCAATTATAATGACATCACTCTAGCTTCATGTCCTTTGCTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATTTGTC--TTTTTCCCTTTGTCTTTC-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACTAAGCAATTCACTTACACAAATGGCTTTGCATAATCATC-TGTTGTGTCACAG--GAAAATGTTGTGCAAGAAAAAGTTGAATTTGTATCACATGGAACTGAAGAAAATTCTCTTAAATATACT-AAAAATCATATTAATACCTCCATTTGGCAGGTAACATGTGATGTTCTAGCAAGGTATAGAAATCCAGTTTCCATGGTACTA-TAATTACAAAA--ATTTATGGTTAGTAAACCCAATTGCATACACTGTTTATTTTAATATTCTTTAACTA---AACCTCTCTCTGTCCACTAAATTGAAAATAAAAGT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20763316 666 - 38779656 AAGATATAGTCATTGCATTTTAGAAACAAAGTTTAAAATAATGCCG-TAACTACGATATTCAGTCATTCACTATAAAATTATCTGTTGTA-----ATCTTCACTTTGGAATATGGATAACTAAACAGTAATATATAAACAAACAACATCAAAGTGGCTTTTTGGCAAACTGCCACCCTGCCACTTCTGAACTAAAGCCAATTATAATGACATCACTCTAGCTGTACGTCCTTTGCTGACCTTCCTACTCATATCGCCAAAATGTATTAAATTTCTACTCTACAATTTGTC--TTATTCCCTTTGTCTTTG-TTCCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACCAAGCAATTCACTTACACAAAAGGCTTTGCATAATCGTC-TGTTGTGTCACAGAAAAAAAAATTGTGTAAGAAAAAGTTGAATTTGTATGATACAGAACTAAAGAAAATGATTTTAAATATACA-AAAAATT------AAACCTTCTTTTCACAGGTAAGGCGTGATGTTCTTTTGAGCTATAAAAATCCAGTGTTCAAGATACTCTTAATTATCAAA--ATTTATAGTTAGTAAACCAATCTGCATATACTGGGTTTTTTGGTATTCTTAAAGTA---AACATCTCTCCATTCACTAACTTGAAAATAAAAGT i otoGar3.GL873528 I 335 C 0 s mm10.chr16 78135557 642 + 98207768 AAGATGAAGTCATTGTGTTCTAAAAACAAAGTTTAAGATGATGCAG-TAGTCACAACAATCAGTCACCCACCCTTAAATTATCTGTTGTA-----ACCTCCACTTCTGGGTATGGATAGCTAAATGACAAAGTATAAACAAGCCGCGTCAAAGTGCCTTCTTGGCTAACTGCCACCCTGCCACTTCTGAACTGAAGCCAGTTATGATGACATCACTCCAGCTTTGTGTCCT--------------ACATATGTTGCTAAAATGCATTAAATGTCTTCCTTCCAATTTGCCCTTTATTCACTTTGGC-----TTCCTTTAAATAATGACTTGACATCTCTTGACCTCAACCTACAATTTTGGCTAATATTACCACTGAGCAATTGATCTACAGAGACAGTCTTGTAGAATCATC-TTCTGTGTCATAT-GTAAATG--TGTGCAAGAAAAGACTGAATTTATATAACACAGAACT----AAGTTTATTTTAAATATAC--AAAAGCC------TCACTTTGATTTCATAGGTAAGATAGGATG-TCCGTCAAGCTG-AGAAATCCAGTTTTTATGGTCCCA-TAACTATAAAAAGATGTATAATTAGCAAACCCATGTTCACAGA-TGTCTA-TTTAGTATTCTTTAACTGAAAAAAATCACTGTGACCGCTCAGTTAAAACCATAAGT i mm10.chr16 C 0 C 0 s canFam3.chr31 13838690 647 + 39895921 AAGATATAGTCATTGCATTTTAGAAACAAAGTTTAAAGTAAGACAG-TAACCACAATATTCA-TCATCCACCATAAAATTATCTGCTGTA-----ATCTCCACTTCTGGATATGGATAGCTAAATAGCAATATATAAACAAACAACATCAAAGTGCCTTTTTGGCTAACTGCCACCCTGCCATTTCTGAACTATAGCCAATTATAATGACATCACTCTAGCTTTGTGTCCTTTACTGACCTTCCTACTTATGTTGCCAAAATGTATTAAATTTCTCCTCTACAATCTGTC--TTTTTCCCTTTGCCTTTG-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACTGAGCAATTCACTTACATAAATGGCCTTGCATAATCATC-TGTTGTGTCACAG-AAAAAT--TTGTGCAAGACAAGATTGAATCTGTGTGACATA-AACTGAAGAAATTTCTTTTAAATATTCT-AAAAATC------ATACCTCCATTAGGCAGCTGAAATGAGAT-------CAAGCTATAAAAATCTAGTTTCCATAGTACTA-GAGTTTAAAAA-----TATGTTTAGTAAATCGACCTGCACA---TGTCTATTTTAGCATTCTTTAAGTA---AAAGTCATTCTGACCACTAAATTAAAAATGAgggc i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3628309 635 - 6883506 AAGATATAGTAATTGGATTTTAGACACAAAGTTTAAAACAAAGCCGCTAACCACAATATTCAGTCATCTACCATAAAATTATCTATTATA-----GCCTCCACGTCTGGATAGGGATAGCTAAATAACCATATATAAACAAAGACTATCAAAGTGCCTTTTTGGCTAACTGCCAC--------TTGTGAATTGAAGCTAATTATAATGACATCACTCTAGTTTCATGTCCTTTACTGAACTTCCTACTTACGTTGCCAAAATGTATTAAATTTCTCCTCTTCAATTTGTC-TTTTTTTCCTTTGTCTTTC-TTTCTTTAAATAATGACTTGACATCACTTGACCTCAACCTACAATTTTGGCTGATAATATCACTGAACAATTCACTTATATAAATAGCCTTGTACAATCATCTTGTTGTGTCATAG-AAAAAT--TCATGCATACAAAGATTGAAGTTACTTGACCTCAAGTTGAAGAAAATTCTTTTAAATGTTAT-AAAAATC------ATACTACCATTAGGCAAGTAA--TAATTTTTTTTATCAAGTTCTGGAAATCCAGTTTCCATGGTATCA-TAGTTA-------------------TAAACCCACCTGCATATGCTA---ATTTTAGAATTCTTCAAGTG---AAAGTCACTCTGTTCATTCAGTTGAAAGTAACAGT i dasNov3.JH568778 C 0 C 0 a score=9985.000000 s hg38.chr21_KI270874v1_alt 107843 1 + 166743 G s panTro5.chr21 3733057 1 + 33445071 G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358871 1 + 46275980 G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298267 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481384 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436211 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260528 1 - 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741523 1 + 9440265 G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471017 1 + 21915920 G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045800 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225773 1 + 4234846 G i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 228966 1 - 13750039 G i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945066 1 + 50472720 G i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046221 1 + 13128814 G i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623685 1 - 14377064 G i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761359 1 + 9889416 G i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19213013 1 + 47401472 G i micMur3.chr31 C 0 I 157 s proCoq1.NW_012144079v1 1110525 1 + 2694913 G i proCoq1.NW_012144079v1 C 0 I 170 s otoGar3.GL873528 20763982 1 - 38779656 A i otoGar3.GL873528 C 0 I 2 s mm10.chr16 78136199 1 + 98207768 T i mm10.chr16 C 0 C 0 s canFam3.chr31 13839337 1 + 39895921 a i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3628944 0 - 6883506 C a score=26730.000000 s hg38.chr21_KI270874v1_alt 107844 2 + 166743 AT s panTro5.chr21 3733058 2 + 33445071 AT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358872 2 + 46275980 AT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298268 2 - 13858734 AT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481385 2 + 32716333 AT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436212 2 - 185818997 AT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260529 2 - 192294377 AT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741524 2 + 9440265 AT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471018 2 + 21915920 AT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045801 2 - 90373283 AT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225774 2 + 4234846 AT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 228967 2 - 13750039 AT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945067 2 + 50472720 AT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046222 2 + 13128814 AT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623686 2 - 14377064 AT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761360 2 + 9889416 AT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20763985 2 - 38779656 AT i otoGar3.GL873528 I 2 C 0 s mm10.chr16 78136200 2 + 98207768 AT i mm10.chr16 C 0 I 5 s canFam3.chr31 13839338 2 + 39895921 gc i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e dasNov3.JH568778 3628944 0 - 6883506 C e micMur3.chr31 19213014 157 + 47401472 I a score=15300.000000 s hg38.chr21_KI270874v1_alt 107846 1 + 166743 C s panTro5.chr21 3733060 1 + 33445071 C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358874 1 + 46275980 C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298270 1 - 13858734 C i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481387 1 + 32716333 C i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436214 1 - 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260531 1 - 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741526 1 + 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471020 1 + 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045803 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225776 1 + 4234846 C i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 228969 1 - 13750039 C i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945069 1 + 50472720 C i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046224 1 + 13128814 C i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623688 1 - 14377064 C i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761362 1 + 9889416 C i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20763987 1 - 38779656 C i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13839340 1 + 39895921 c i canFam3.chr31 C 0 I 215 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e dasNov3.JH568778 3628944 0 - 6883506 C e micMur3.chr31 19213014 157 + 47401472 I e mm10.chr16 78136202 5 + 98207768 I a score=100247.000000 s hg38.chr21_KI270874v1_alt 107847 11 + 166743 CAGTGAAATTG- s panTro5.chr21 3733061 11 + 33445071 CAGTGAAATTG- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358875 11 + 46275980 CAGTGAAATTG- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298271 11 - 13858734 CAGTGAAATTG- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481388 11 + 32716333 CAGCGAAATGG- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436215 11 - 185818997 TAGTGAAATTG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260532 11 - 192294377 TAGTGAAATTG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741527 11 + 9440265 TAGTGAAATTG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471021 11 + 21915920 TAGTGAAATTG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045804 11 - 90373283 TAGTGAAATTG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225777 11 + 4234846 TAGTGAAATTG- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 228970 11 - 13750039 TAGTGAAATTG- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945070 11 + 50472720 Cagtgaaattg- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046225 11 + 13128814 CAGTGAAATTG- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623689 11 - 14377064 Cagtgaaattg- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761363 11 + 9889416 CAGTGAAATTG- i aotNan1.NW_018487195v1 C 0 I 310 s otoGar3.GL873528 20763988 12 - 38779656 TCATTAGCTGAG i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e dasNov3.JH568778 3628944 0 - 6883506 C e micMur3.chr31 19213014 157 + 47401472 I e canFam3.chr31 13839341 215 + 39895921 I e mm10.chr16 78136202 5 + 98207768 I a score=224745.000000 s hg38.chr21_KI270874v1_alt 107858 28 + 166743 CTTGGTCAATGTGCTTGTAG-TTTTTCAA s panTro5.chr21 3733072 28 + 33445071 CTTGGTCAATGTGCATGTAG-TTTTTCAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358886 28 + 46275980 CTTGGTCAATGTGCACGTAG-TTTTTCAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298282 28 - 13858734 CTTGGTCAATGTGCACGTAG-TTTTTCAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481399 28 + 32716333 CTTGGTCAATGTGTATGTAG-TTTTTCAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436226 28 - 185818997 CTGGGTCAATGTGTATATAG-TTTTTCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260543 28 - 192294377 CTGGGTCAATGTGTATATAG-TTTTTCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741538 28 + 9440265 CTGGGTCAATGTGTATATAG-TTTTTCAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471032 28 + 21915920 CTGGGTCAATGTGTGTATAG-TTTTTCAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045815 29 - 90373283 CTGGGTCAATGTGTATATAGTTTTTTCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225788 28 + 4234846 CTGGGTCAATGTGTGTATAG-TTTTTCAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 228981 28 - 13750039 CCGGGTCAATGTGTATATAG-TTTTTCAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945081 28 + 50472720 ctgggtcaatgtgtatgcaa-tttttcaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046236 28 + 13128814 CTGGGTCAATGTGTATACAG-TTTTTCAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623700 28 - 14377064 ctgggtcaatgtgtatgcag-tttttcaa i cebCap1.NW_016107322v1 C 0 C 0 s otoGar3.GL873528 20764000 21 - 38779656 CTCTTCCAACATGACTGAAG-T------- i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e dasNov3.JH568778 3628944 0 - 6883506 C e micMur3.chr31 19213014 157 + 47401472 I e aotNan1.NW_018487195v1 8761374 310 + 9889416 I e canFam3.chr31 13839341 215 + 39895921 I e mm10.chr16 78136202 5 + 98207768 I a score=113695.000000 s hg38.chr21_KI270874v1_alt 107886 14 + 166743 TTCAGAAATATACC-- s panTro5.chr21 3733100 14 + 33445071 TTTAGAAATATACC-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358914 14 + 46275980 TTTAGAAATATACC-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298310 14 - 13858734 TTTAGAAATATACC-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481427 14 + 32716333 TTTAGAAATATACC-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436254 14 - 185818997 TTTAGAAATACACT-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260571 14 - 192294377 TTTAGAAATACACT-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741566 14 + 9440265 TTTAGAAATACACT-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471060 14 + 21915920 TTTAGAAATACACT-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045844 14 - 90373283 TTTAGAAATACACT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225816 14 + 4234846 TTTAGAAATACACT-- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229009 14 - 13750039 TTTAGAAATACACT-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945109 14 + 50472720 cttagaaatacatg-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046264 14 + 13128814 CTTAAAAATACATG-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623728 14 - 14377064 cttagaaatacatg-- i cebCap1.NW_016107322v1 C 0 C 0 s otoGar3.GL873528 20764021 14 - 38779656 CTAAGGAATATCCA-- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 26054772 16 - 39895921 TTTAGAGATCCACAAT i canFam3.chr31 T 57565 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e dasNov3.JH568778 3628944 0 - 6883506 C e micMur3.chr31 19213014 157 + 47401472 I e aotNan1.NW_018487195v1 8761374 310 + 9889416 I e mm10.chr16 78136202 5 + 98207768 I a score=558859.000000 s hg38.chr21_KI270874v1_alt 107900 53 + 166743 CTAGTTTTATAAAGGATTGAAATAAGGCATACTGATCTTACATGCATTAGTCC s panTro5.chr21 3733114 53 + 33445071 CTAGTTTTATAAAGGATTGAAATAAGGCATACTGATCTTACATGCATTAGTCC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358928 53 + 46275980 CTAGTTTTATAAAGGATTGAAATAAGGCATACTGATCTTACATGCATTAGTCC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298324 53 - 13858734 CTAGTTTTATAAAGGATTGAAATAAGGCATACTGATCTTACATGCATTAGTCC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481441 53 + 32716333 CTAGTTTTATAAAGGATTGAAATAAGGCATACTGACCTTACATGCATTAGTCC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436268 53 - 185818997 CCAGTTTTATAAAGGATTAAAATAAGGCATATTGATCTTACATGCATTAGTCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260585 53 - 192294377 CCAGTTTTATAAAGGATTAAAATAAGGCATACTGATCTTACATGCATTAGTCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741580 53 + 9440265 TCAGTTTTATAAAGGATTAAAATAAGGCATACTGATCTTACATGCATTAGTCC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471074 53 + 21915920 CCAGTTTTATAAAGGATTAAAATAAGGCATACTGATCTTACATGCATTAGTCC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045858 53 - 90373283 CCAGTTTTATAAAGGATTAAAATAAGGCATACTGATCTTACATGCATTAGTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225830 53 + 4234846 CCAGTTTTATAAAGGATTAAAATAAGGCATACTCATCTTACATGCATTAGTCC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229023 53 - 13750039 CCAGTTTTACAAAGGATTAAAATAAGGCATACTGATCTTACATGCATTAGTCC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945123 53 + 50472720 ctagttttacaaagGATCTAAATAAGTCCTACTGATCTTACATGCATTAGTCC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046278 53 + 13128814 CTAGTTTTACAAAGGATTAAAATAAGTCCCACTGATCTTACACGCATTAGTCG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623742 53 - 14377064 ctagttttacaaagGATCAAAATAAGTCCAAGTGATCTTACATGCATTAGTCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761684 53 + 9889416 CTAGTTTTACAAAGGATCAAAATAAGTCCCACTGATCTTACATGCATTCATCC i aotNan1.NW_018487195v1 I 310 C 0 s otoGar3.GL873528 20764035 50 - 38779656 CAAATGCTAAGGAAGA--AAAGTCCAATA-ATTGATTTGATAAAAATTAATCT i otoGar3.GL873528 C 0 I 139 s canFam3.chr31 26054788 53 - 39895921 TCAGTTTCACATAAGGTGAAAACAAGACCCACTGGTTTTATGTGCATTAATTC i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e dasNov3.JH568778 3628944 0 - 6883506 C e micMur3.chr31 19213014 157 + 47401472 I e mm10.chr16 78136202 5 + 98207768 I a score=798000.000000 s hg38.chr21_KI270874v1_alt 107953 74 + 166743 AAGATGAGAAGTCCTTTCCCTGCGAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAA s panTro5.chr21 3733167 74 + 33445071 AAGATGAGAAGTCCTTTCCCTGTGAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17358981 74 + 46275980 AAGATGAGAAGTCCTTTCCCTGTGAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298377 74 - 13858734 AAGATGAGAAGTCCTTTCCCTGTGAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481494 74 + 32716333 AAGATGAGAAGTCCTTTCCCTGGGAAGGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTACATGTAACAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436321 74 - 185818997 AAGACGAGAAGTCCTTTCTCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260638 74 - 192294377 AAGACGAGAAGTCCTTTCCCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741633 74 + 9440265 AAGACGAGAAGTCCTTTCCCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471127 74 + 21915920 AAGATGAGAAGTCCTTTCCCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045911 74 - 90373283 AAGATGAGAAGTCCTTTCCCTGCGAAGGAATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225883 74 + 4234846 AAGACGAGAAGTCCTTTCCCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGTAACAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229076 74 - 13750039 AAGACAAGAAGTCCTTTCCCTGCGAAGGGATCTTAGGCATCTGCCAAATTCTGGTGATCTATTATATGGAACAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945176 74 + 50472720 AAGATGACAAGTCCTTTCCCTGGAAAAGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTGTATATAACAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046331 74 + 13128814 AAGATGACAAGTCCTTCTCCTGGAAAAGGACCTTAGGCATCTGCCAACTTCTGGTGATCTACTGTATATAACAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623795 74 - 14377064 AAGATGACAAGTCCTTTCCCTAGAAAAGGACCTTAGGCATCTGCCAACTTCTGGTGATCTATTGTATATAACAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761737 74 + 9889416 AAGATGACAAGTCCTTTCCCTGGAAAAGGACCTTAGGCATCTGCCAAGTTCTGGTGATCTATTGTATGTAACAA i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 26054841 74 - 39895921 AAAATGACATGTTTCTTTCCTAGGAAGGAACCCTAGGCATATGCCAGGTTCCGGTAAACTATTACAGACTACAA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e dasNov3.JH568778 3628944 0 - 6883506 C e micMur3.chr31 19213014 157 + 47401472 I e otoGar3.GL873528 20764085 139 - 38779656 I e mm10.chr16 78136202 5 + 98207768 I a score=75837.000000 s hg38.chr21_KI270874v1_alt 108027 11 + 166743 TGTTTTCTCTG s panTro5.chr21 3733241 11 + 33445071 TGTTTTCTCTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359055 11 + 46275980 TGTTTTCTCTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298451 11 - 13858734 TGTTTTCTCTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481568 11 + 32716333 TGTTTTCTCTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436395 10 - 185818997 TG-TTTGTCTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260712 10 - 192294377 TG-TTTGTCTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741707 10 + 9440265 TG-TTTGTCTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471201 10 + 21915920 TG-TTTGTCTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045985 10 - 90373283 TG-TTTGTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225957 10 + 4234846 TG-TTTGTCTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229150 10 - 13750039 TG-TTTCTCTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945250 11 + 50472720 TGTTTTCTCTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046405 11 + 13128814 TGTTTTCTCTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623869 11 - 14377064 TGTTTTCTCTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761811 11 + 9889416 TGTTTTCTCTG i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 26054915 10 - 39895921 TG-TTTCTCAG i canFam3.chr31 C 0 n 0 s dasNov3.JH568778 3628944 7 - 6883506 TGTATTC---- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e micMur3.chr31 19213014 157 + 47401472 I e otoGar3.GL873528 20764085 139 - 38779656 I e mm10.chr16 78136202 5 + 98207768 I a score=15300.000000 s hg38.chr21_KI270874v1_alt 108038 1 + 166743 C s panTro5.chr21 3733252 1 + 33445071 C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359066 1 + 46275980 C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298462 1 - 13858734 C i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481579 1 + 32716333 C i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436405 1 - 185818997 C i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260722 1 - 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741717 1 + 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471211 1 + 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045995 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225967 1 + 4234846 C i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229160 1 - 13750039 C i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945261 1 + 50472720 C i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046416 1 + 13128814 C i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623880 1 - 14377064 C i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761822 1 + 9889416 C i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13839556 1 + 39895921 C i canFam3.chr31 I 215 C 0 s dasNov3.JH568778 3628951 1 - 6883506 C i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e micMur3.chr31 19213014 157 + 47401472 I e otoGar3.GL873528 20764085 139 - 38779656 I e mm10.chr16 78136202 5 + 98207768 I a score=750909.000000 s hg38.chr21_KI270874v1_alt 108039 61 + 166743 ATTAGCTAAGGTCTTCAAGCATAATCGAAATCCTAGATATATTTGCATATCCACATATGCT s panTro5.chr21 3733253 61 + 33445071 ATTAGCTAAGGTCTTCAAGCATAATCAAAATCCTAGATATATTTGCATATCCACATATGCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359067 61 + 46275980 ATTAGCTAAGGTCTTCAAGCATAATCAAAATCCTAGATATATTTGCATATCCACATATGCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298463 61 - 13858734 ATTAGCTAAGGTCTTCAAGCATAATCAAAATCCTAGATATATTTGCATATCCACATATGCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481580 61 + 32716333 ATTAGCTAAGGTCTTCAAGCATAATTGAAATCCTAGATATATTTGCATATCCACATATGCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436406 61 - 185818997 ATTAGCTAAGGTCTTCAAGCATGAATGAAATCCTAGATATATTTGGATATCCACATATACT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260723 61 - 192294377 ATTAGCTAAGGTCTTCAAGCATGAATGAAATCCTAGATATATTTGGATATCCACATATACT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741718 61 + 9440265 ATTAGCTAAGGTCTTCAAGCATGAATGAAATCCTAGATATATTTGGATATCCACATATACT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471212 61 + 21915920 ATTAGCTAAGGTCTTCAAGCATGACTGAAATCCTAGATATATTTAGATATCCACATATACT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15045996 61 - 90373283 ATTAGCTAAGGTCTTCAAGCATGACTGAAATCCTAGATATACTTGGATATCCACATATACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2225968 61 + 4234846 ATTAGCTAAGGTCTTCAAACATGACTGAAATCCTAGATATATTTAGATATCCACATATACT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229161 61 - 13750039 ATTAGCTAAGGTCTTCAAGCATGATTGAAATCCTAGATATATTTGGATATCCACATATACT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945262 61 + 50472720 ATTAGCTAAGGTCTTCAAACATGATTGAAATCTTAGATATATTTGGATATCCACATATACT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046417 61 + 13128814 ATTAGCTAAGGTCTTCAAACATGATTGAAATCTTAGATATATTTGGATATCCACATATACT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623881 61 - 14377064 ATTAGCTAAGGTCTTCAAACATGATTGAAATCTTAGATATATTTGGATATCCACATATACT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761823 61 + 9889416 ATTAGCTAAGGTCTTCAAACGTGATTGAAATCTTAGATATAATTGAATATCCACATATACT i aotNan1.NW_018487195v1 C 0 C 0 s mm10.chr16 78136207 60 + 98207768 ATTAGTTAGGCCTCCTAAGTGTGATTAAAGGCTTGGGTATGTTTGACTATCCACA-ATAAG i mm10.chr16 I 5 I 2 s canFam3.chr31 13839557 61 + 39895921 ATTAGTTGAGGTCTTCAATCATGACTGAAGCGTTGAATGTATTTGAAAATCCACAAATACT i canFam3.chr31 C 0 I 3 s dasNov3.JH568778 3628952 59 - 6883506 ATTAGTTCAGGTCTTCAAACATGACTGAAATCTT-GATCTGTTTG-AGATTCACAAATACT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e micMur3.chr31 19213014 157 + 47401472 I e otoGar3.GL873528 20764085 139 - 38779656 I a score=868177.000000 s hg38.chr21_KI270874v1_alt 108100 94 + 166743 ----AAGGAAAATAACTG----TTTATCAATTTGATAAAAAATGAATCTCTTTGGCATGT-----TAAA----AGT-------TTTTTCTG--AAAAAAATAGAGCCCAGCTAATAAAAA s panTro5.chr21 3733314 94 + 33445071 ----AAGGAAAATAACTG----TTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TAAA----AGT-------TTTTTCTG--AAAAAAATAGAGCCCAGCTAATAAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359128 94 + 46275980 ----AAGGAAAATAACTG----TTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TAAA----AGT-------TTTTTCTG--AAAAAAATAGAGCCCAGCTAATAAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298524 93 - 13858734 ----AAGGAAAATAACTG----TTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TAAA----AG--------TTTTTCTG--AAAAAAATAGAGCCCAGCTAATAAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481641 92 + 32716333 ----AAGGAAAATAAC------TTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TAAA----AGT-------TTTTTCTG--AAAAAAATATAGCCCAGCTAATAAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436467 95 - 185818997 ----AAGGAAAATAGCTG----TTTATCAATTTGATAAAAAAGGAATCTCTTTGGAACAT-----TAAA----AGT-------TTCTTCTG-AAAAAAAATATAGCCCAGTTAATAAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260784 96 - 192294377 ----AAGGAAAATAGCTG----TTTATCAATTTGATAAAAAAGGAATCTCTTTGGAACAT-----TAAA----AGT-------TTCTTCTGAAAAAAAAATATAGCCCAGTTAATAAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741779 96 + 9440265 ----AAGGAAAATAGCTG----TTTATCAATTTGATAAAAAAGGAATCTCTTTGGAACAT-----TAAA----AGT-------TTCTTCTGAAAAAAAAATATAGCCCAGTTAATAAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471273 95 + 21915920 ----AAGGAAAATAGCTG----TTTATCAATTTGATAAAAAATGAATCTCTTTGGAACGT-----TAAA----AGT-------TTTTTCTG-AAAAAAAATATAGCCCAGCTAATAAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046057 94 - 90373283 ----AAGGAAAATAGCTG----TTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TAGA----AGT-------TTTTTCTG-AAAAAAAA-ATAGCCCAGTTAATAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226029 94 + 4234846 ----TAGGAAAATAGCTG----TTTATCAATTTGATAAAAAATGAATCTCTTTGGAACGT-----TAAA----AGT-------TTTTTCTG-AAAAAAAA-ATAGCCCAGCTAATAAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229222 95 - 13750039 ----AAGGAAAACAGCTG----TTTATCAATTTGACAAAAAACGAATCTCTTTGGAACGT-----TAAA----AGT-------TTTTTCTG-AAAAAAAATATAGCCCAGCTAATAAAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945323 96 + 50472720 ----AAGGAAAATAAC------ATTATCAATTTGA-TAAAAATGAATCTCTTTGGAATGT-----TAAAACACAGTT-----ATTTTTCT---AAAAAAAAATAGCCCAGTTAATAAAGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046478 98 + 13128814 ----AAGGAAAATAAC------TTTATCAATTTGATTAAAAATGAATCTCTTTGGAATGT-----TAAAACACAGTT-----CTTTTTCTG--AAAAAAAAATAGCCCAGTTAATAAAGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9623942 98 - 14377064 ----AAGGAAAATAAC------TTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TAAAACACAGTT-----ATTTTTCTG--AAAAAAAAATAGTTCAGTTAATAAAGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761884 94 + 9889416 ----AAGGAAAATAAC------TTTATCAATTTGATAAAAAATGAATCTCTTTGGAATGT-----TAAA----AGTT-----ATTTTCTGA--AAAAAAAAAAAGCCCAGTTAATAAAGA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20764224 64 - 38779656 ----AATAAAAATCTCTC----TCTGTTAA----AAAAAAAAAAGAT---------------------A----AGT-------------------ATATATATAGCCCAATTAATGTAGA i otoGar3.GL873528 I 139 C 0 s mm10.chr16 78136269 96 + 98207768 ----AGGAAAATTAAGTA----GCTCTCCATTTGAAGCAATATT-ATCTGTTTGAAGTGTAAAGCTGAA----AGCT---TGTTTTTCCTT-----TAACTATGACCTACTTAATAA--- i mm10.chr16 I 2 C 0 s canFam3.chr31 13839621 100 + 39895921 ----AAAGAAAACAATTG----TTTATCTATCTGAAAGAAAATTAATCTCTTTGGAATGT-----TAAGACAAAGTT------ATTTTCTG-AAAAAATATATAGTCCAGTCAATAAAGA i canFam3.chr31 I 3 C 0 s dasNov3.JH568778 3629011 104 - 6883506 AAGAAAGAAAACTAAATGAGTTGTTTTCCATTCAAAAGAAAATTAATCTTTTTAAAATGC-----TAAA----CTTTAAATTTTTTCCCTG-----AAAATGTGGCCCAATTAATAGA-- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I e micMur3.chr31 19213014 157 + 47401472 I a score=361253.000000 s hg38.chr21_KI270874v1_alt 108194 24 + 166743 ATATTTTCTGATAGAATAATTATG s panTro5.chr21 3733408 24 + 33445071 ATATTTTCTGATAGAATAATTATG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359222 24 + 46275980 ATATTTTCTGATAGAATAATTATG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298617 24 - 13858734 ATATTTTCTGATAGAATAATTATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481733 24 + 32716333 ATATTTTCTGATAGAATAATTATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436562 24 - 185818997 ATATTTTCTGATAGAATAATTATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260880 24 - 192294377 ATATTTTCTGATAGAATAATTATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741875 24 + 9440265 ATATTTTCTGATAGAATAATTATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471368 24 + 21915920 ATATTTTCTGATAGAATAATTATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046151 24 - 90373283 ATATTTTCTGATAGAATAATTATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226123 24 + 4234846 ATATTTTCTGATAGAATAATTATG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229317 24 - 13750039 ATATTTTCTGATAGAATAATTATG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945419 24 + 50472720 ATATTTTCTGATAGAATAATTATG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046576 24 + 13128814 ATATTTTCTAATAGAATAATTATG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624040 24 - 14377064 ATATTTTCTGATAGAATAATTATG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8761978 24 + 9889416 ATATTTTCTGATAGAATAATTACG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19213171 22 + 47401472 ATATTTACTGATAGAATAATTA-- i micMur3.chr31 I 157 C 0 s otoGar3.GL873528 20764288 24 - 38779656 ATATTTACTGATAGAATAATTATA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78136365 21 + 98207768 ATACTCAT---TAGAATAAACATC i mm10.chr16 C 0 I 3 s canFam3.chr31 13839721 24 + 39895921 ATATATATTAATGGGATAATTATG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3629115 24 - 6883506 ATATTTGCTGTTAAGATTACAATG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1110526 170 + 2694913 I a score=250210.000000 s hg38.chr21_KI270874v1_alt 108218 16 + 166743 TAATAAAA-TGTGTGCT s panTro5.chr21 3733432 16 + 33445071 TAATAAAA-TGTGTGCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359246 16 + 46275980 CAATAAAA-TGTGTGCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3298641 16 - 13858734 TAATAAAA-TGTGTGCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481757 16 + 32716333 TAATAAAA-TGTGTGCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436586 16 - 185818997 TAATAAAA-TGTACGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260904 16 - 192294377 TAATAAAA-TGTACGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741899 16 + 9440265 TAATAAAA-TGTACGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471392 16 + 21915920 TAATAAAA-TGTACGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046175 16 - 90373283 TAATAAAA-TGTACGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226147 16 + 4234846 TAATAAAA-TGTACGCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229341 16 - 13750039 TAATAAAA-TGTATGCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945443 16 + 50472720 CAATAAAA-TGTGTGCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046600 16 + 13128814 TAATAAAA-TGTGTGCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624064 16 - 14377064 TAATAAAA-TGTGTGCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762002 16 + 9889416 TAATAAGA-TGTGTGCC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19213193 14 + 47401472 --ATAAAA-TGTGTGCT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1110696 16 + 2694913 TAATAAAA-TGTGTGCT i proCoq1.NW_012144079v1 I 170 C 0 s otoGar3.GL873528 20764312 16 - 38779656 TAATAAAA-TGTATGTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78136389 16 + 98207768 GAATAAAA-CTTGAACT i mm10.chr16 I 3 I 103 s canFam3.chr31 13839745 16 + 39895921 TTAAAAAG-TATGTGCT i canFam3.chr31 C 0 I 663 s dasNov3.JH568778 3629139 17 - 6883506 TAATAAAAGTTTTTGTT i dasNov3.JH568778 C 0 C 0 a score=270028.000000 s hg38.chr21_KI270874v1_alt 108234 19 + 166743 AGTCTGTATTATGATGTTG s panTro5.chr21 3733448 19 + 33445071 AGTCCGTATTACGATGTTG i panTro5.chr21 C 0 I 432 s panPan2.chr21 17359262 19 + 46275980 AGTCCGTATTACGATGTTG i panPan2.chr21 C 0 I 433 s gorGor5.CYUI01015003v1 3298657 19 - 13858734 AGTCCTTATTATGATGTTG i gorGor5.CYUI01015003v1 C 0 I 432 s nomLeu3.chr25 4481773 19 + 32716333 AGTCTGTATTATGATGTTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436602 19 - 185818997 AGTCTACATTATGATGTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162260920 19 - 192294377 AGTCTACATTATGATGTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741915 19 + 9440265 AGTCTACATTATGATGTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471408 19 + 21915920 AGTCTATATTATGATGTTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046191 19 - 90373283 AGTCTACATTATGATGTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226163 19 + 4234846 AGTCTATATCATGATGTTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229357 19 - 13750039 AGTCTACATTATGATGTTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945459 19 + 50472720 AGTATATATTATGATGCTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046616 19 + 13128814 AGTCTATATTATGATGCTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624080 19 - 14377064 AGCCTATATTATGATGCTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762018 19 + 9889416 AGTCTATATTATGATGCTG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19213207 19 + 47401472 AGTCTATATTATGATGTTG i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1110712 19 + 2694913 AGTCTATATTATGATGTTG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20764328 19 - 38779656 GGCCTTTATTATGATGTTG i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3629156 19 - 6883506 ACTCTATAATAAGATGTTG i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13839761 663 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=17290.000000 s hg38.chr21_KI270874v1_alt 108253 1 + 166743 A s panTro5.chr21 3733899 1 + 33445071 a i panTro5.chr21 I 432 C 0 s panPan2.chr21 17359714 1 + 46275980 a i panPan2.chr21 I 433 C 0 s gorGor5.CYUI01015003v1 3299108 1 - 13858734 a i gorGor5.CYUI01015003v1 I 432 C 0 s nomLeu3.chr25 4481792 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155436621 1 - 185818997 A i rheMac8.chr3 C 0 I 423 s macFas5.chr3 162260939 1 - 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8741934 1 + 9440265 A i macNem1.NW_012019910v1 C 0 I 418 s cerAty1.NW_012002954v1 8471427 1 + 21915920 A i cerAty1.NW_012002954v1 C 0 I 438 s chlSab2.chr2 15046210 1 - 90373283 A i chlSab2.chr2 C 0 I 438 s manLeu1.NW_012102865v1 2226182 1 + 4234846 A i manLeu1.NW_012102865v1 C 0 I 438 s colAng1.NW_012120598v1 229376 1 - 13750039 A i colAng1.NW_012120598v1 C 0 I 443 s calJac3.chr21 21945478 1 + 50472720 A i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5046635 1 + 13128814 A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624099 1 - 14377064 A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762037 1 + 9889416 A i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19213226 1 + 47401472 A i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1110731 1 + 2694913 A i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20764347 1 - 38779656 A i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3629175 1 - 6883506 A i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13839761 663 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=26783.000000 s hg38.chr21_KI270874v1_alt 108254 4 + 166743 CCCA s panTro5.chr21 3733900 4 + 33445071 ccca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359715 4 + 46275980 ccca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299109 4 - 13858734 ccca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4481793 4 + 32716333 CTCA i nomLeu3.chr25 C 0 I 432 s macFas5.chr3 162260940 4 - 192294377 TTCA i macFas5.chr3 C 0 I 418 s calJac3.chr21 21945479 4 + 50472720 CTCA i calJac3.chr21 C 0 I 432 s saiBol1.JH378168 5046636 4 + 13128814 CTCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624100 4 - 14377064 CTCA i cebCap1.NW_016107322v1 C 0 I 433 s aotNan1.NW_018487195v1 8762038 4 + 9889416 CTCA i aotNan1.NW_018487195v1 C 0 I 433 s micMur3.chr31 19213227 4 + 47401472 CTCA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1110732 4 + 2694913 CTCA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20764348 4 - 38779656 CTCA i otoGar3.GL873528 C 0 I 444 s dasNov3.JH568778 3629176 4 - 6883506 TTCA i dasNov3.JH568778 C 0 I 939 e canFam3.chr31 13839761 663 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I e colAng1.NW_012120598v1 229377 443 - 13750039 I e cerAty1.NW_012002954v1 8471428 438 + 21915920 I e macNem1.NW_012019910v1 8741935 418 + 9440265 I e manLeu1.NW_012102865v1 2226183 438 + 4234846 I e chlSab2.chr2 15046211 438 - 90373283 I e rheMac8.chr3 155436622 423 - 185818997 I a score=13923.000000 s hg38.chr21_KI270874v1_alt 108258 1 + 166743 T s panTro5.chr21 3733904 1 + 33445071 t i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359719 1 + 46275980 t i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299113 1 - 13858734 t i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482229 1 + 32716333 t i nomLeu3.chr25 I 432 C 0 s rheMac8.chr3 155437045 1 - 185818997 t i rheMac8.chr3 I 423 C 0 s macFas5.chr3 162261362 1 - 192294377 t i macFas5.chr3 I 418 C 0 s macNem1.NW_012019910v1 8742353 1 + 9440265 t i macNem1.NW_012019910v1 I 418 C 0 s cerAty1.NW_012002954v1 8471866 1 + 21915920 t i cerAty1.NW_012002954v1 I 438 C 0 s chlSab2.chr2 15046649 1 - 90373283 t i chlSab2.chr2 I 438 C 0 s manLeu1.NW_012102865v1 2226621 1 + 4234846 t i manLeu1.NW_012102865v1 I 438 C 0 s calJac3.chr21 21945915 1 + 50472720 t i calJac3.chr21 I 432 C 0 s saiBol1.JH378168 5046640 1 + 13128814 T i saiBol1.JH378168 C 0 I 1341 s cebCap1.NW_016107322v1 9624537 1 - 14377064 t i cebCap1.NW_016107322v1 I 433 C 0 s aotNan1.NW_018487195v1 8762475 1 + 9889416 t i aotNan1.NW_018487195v1 I 433 C 0 s micMur3.chr31 19213231 1 + 47401472 T i micMur3.chr31 C 0 I 1203 s proCoq1.NW_012144079v1 1110736 1 + 2694913 T i proCoq1.NW_012144079v1 C 0 I 485 s otoGar3.GL873528 20764796 1 - 38779656 t i otoGar3.GL873528 I 444 C 0 e dasNov3.JH568778 3629180 939 - 6883506 I e canFam3.chr31 13839761 663 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I e colAng1.NW_012120598v1 229377 443 - 13750039 I a score=61651.000000 s hg38.chr21_KI270874v1_alt 108259 8 + 166743 AACATAGT s panTro5.chr21 3733905 8 + 33445071 aacatagt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359720 8 + 46275980 aacatagt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299114 8 - 13858734 aacatagt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482230 8 + 32716333 aatatagt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437046 8 - 185818997 aacatagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261363 4 - 192294377 aaca---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742354 8 + 9440265 aacatagt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471867 8 + 21915920 aacatagt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046650 8 - 90373283 aacatagt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226622 8 + 4234846 aacatagt i manLeu1.NW_012102865v1 C 0 C 0 s calJac3.chr21 21945916 8 + 50472720 aacatagt i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9624538 8 - 14377064 aacatagt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762476 8 + 9889416 aacataat i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20764797 7 - 38779656 aacatag- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840424 8 + 39895921 agcataat i canFam3.chr31 I 663 C 0 e proCoq1.NW_012144079v1 1110737 485 + 2694913 I e dasNov3.JH568778 3629180 939 - 6883506 I e micMur3.chr31 19213232 1203 + 47401472 I e saiBol1.JH378168 5046641 1341 + 13128814 I e mm10.chr16 78136405 103 + 98207768 I e colAng1.NW_012120598v1 229377 443 - 13750039 I a score=228545.000000 s hg38.chr21_KI270874v1_alt 108267 28 + 166743 -TAGAGCTCAATCAACTATACTTG----CAAAA s panTro5.chr21 3733913 28 + 33445071 -tagagctcaatcaaCTATACTTG----CAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359728 28 + 46275980 -tagagctcaatcaaCTATACTTG----CAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299122 28 - 13858734 -tagagctcaatCAACTATACTTG----CAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482238 28 + 32716333 -tacagctcaatcaaCTGTACTTG----CAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437054 28 - 185818997 -tagagttcaGTCAACTATAATTG----CAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261367 28 - 192294377 -tagAGTTCAGTCAACTATAATTG----CAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742362 28 + 9440265 -tagagttcaGTCAACTATAATTG----CAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471875 28 + 21915920 -tagagttcaGTCAACTATAATTG----CAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046658 28 - 90373283 -tagagctcaatCAACTATAATTG----CAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226630 28 + 4234846 -tagagttcaGTCAACTATAATTG----CAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229820 28 - 13750039 -tagagctcaatcaaCTATAATTG----CAAAA i colAng1.NW_012120598v1 I 443 C 0 s calJac3.chr21 21945924 27 + 50472720 -tagggctcaatCAACTATACTTG-----AAAA i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9624546 27 - 14377064 -tagggctcaatCAACTATACTTG-----AAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762484 27 + 9889416 -tagggctcaatCAACTATACTTG-----AAaa i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20764804 28 - 38779656 ----agctcagtcaactagaactattatCAAA- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840432 32 + 39895921 taagagctcaatCACCTACAGCTTTTATTAAA- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1110737 485 + 2694913 I e dasNov3.JH568778 3629180 939 - 6883506 I e micMur3.chr31 19213232 1203 + 47401472 I e saiBol1.JH378168 5046641 1341 + 13128814 I e mm10.chr16 78136405 103 + 98207768 I a score=82144.000000 s hg38.chr21_KI270874v1_alt 108295 6 + 166743 TAGTAG s panTro5.chr21 3733941 6 + 33445071 TAGTAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359756 6 + 46275980 TAGTAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299150 6 - 13858734 TAGTAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482266 6 + 32716333 TAGTAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437082 6 - 185818997 TAGTAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261395 6 - 192294377 TAGTAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742390 6 + 9440265 TAGTAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471903 6 + 21915920 TAGTAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046686 6 - 90373283 TAGTAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226658 6 + 4234846 TAGTAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229848 6 - 13750039 TAGTAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945951 6 + 50472720 TAGTAG i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9624573 6 - 14377064 TAGTAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762511 6 + 9889416 tagtag i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1111222 6 + 2694913 TAGTGG i proCoq1.NW_012144079v1 I 485 C 0 s otoGar3.GL873528 20764832 6 - 38779656 TAGtag i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840464 6 + 39895921 TGGTAG i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3629180 939 - 6883506 I e micMur3.chr31 19213232 1203 + 47401472 I e saiBol1.JH378168 5046641 1341 + 13128814 I e mm10.chr16 78136405 103 + 98207768 I a score=2530642.000000 s hg38.chr21_KI270874v1_alt 108301 207 + 166743 cacttgtttgtacttcgtagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatattattagtctggtttagagctgagaaaacaaaggcccaaggacatgctgtcagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctat s panTro5.chr21 3733947 207 + 33445071 cacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatgtatattattagtctggtttagagctgaggaaacaaaggcccaaggacatgctatcagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359762 207 + 46275980 cacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacacgtatattattagtctggtttagagctgaggaaacaaaggcccaaggacatgctatcagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299156 207 - 13858734 cacttgtttgtacttcgtagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatattattagtctggtttagagctgaggaaacaaaggcccaaggacatgctatcagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482272 207 + 32716333 cacttgtttgtactttgtagtttacaagttcttttcacatgtaacattcagaaccttgtaaaatcttgtgacttaggaaggacacatacatattattagtctggtttagagctgaggaaacaaaggcccaaggacatgctatcagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcctttctaG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437088 204 - 185818997 cacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatagtatgaatctggtttagagttgaggacacaaaggcccaaggaTATGCTATCAGAA-AGGATCAAAGCCAGAA-TTGAATTCAAGGTTTCTGAATAT--ATTTCAAATATTTTCTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261401 207 - 192294377 CGCTTGTTTgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatagtatgaatctggtttagagttgaggacacaaaggcccaaggaTATGCTATCAGAA-AGGATCAAAGCCAGAATTTGAATTCAAGGTTTCTGAATATGAATTTCAAATATTTTCTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742396 207 + 9440265 cacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatagtatgaatctggtttagagttgaggacacaaaggcccaaggatatgctatcagaa-aggatcaaagccagaatttgaattcaaggtttctgcatatgaatttcaaaTATTTTCTAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8471909 207 + 21915920 cacttgtttgtacttcatagtttaccagttcttttcacatgtgacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatagtatgaatctggtttagagttgaggacacaaaggcccaaggatgtgctatcagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatattttctat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046692 207 - 90373283 cacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtggcttaggaagaacacatacatattatgaatctggtttagagttgaggacacaaaggcccaaagacatgctatcagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatattttctat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226664 207 + 4234846 cacttgtttgtacttcatagtttaccagttcttttcagatgtgacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatattatgaatctggtttagagttgaggacacaaaggcccaaggatatgctatcagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatattttctat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 229854 207 - 13750039 cacttgtttgtacttcatagtttacaagttcttttcacatgtaacattcagaatcttgtaaaatcttgtgacttaggaaggacacatacatattatgagtctggtttagagttgaggaaacaaaggcccaaggacttgctatcagaa-aggatcaaagccagaacgtgaattcaaggtttctgaatcTGATTTTCAAATATTTTCTAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21945957 206 + 50472720 caattgtttatacttcatagtttacaagttcttttcaaatgtaacattcagaatctcataaaaccttgtgacttaggaaggacatgtacatattattagtctgttttcaagttgaggaaacaaaggcccaaggacatgctatttgaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatTTCAAATCTTTTCTT- i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 9624579 204 - 14377064 cacttgtttgtacttcatagtttacaagttcttttcacatgta--attcagaatctcataaaaccttgtgacttaagaaagacatgtacatattattggtctgtttttgagttgaggaatcaaaggcccaaggacatgctattagaa-aggatcaaagccagaatttgaattcaaggtttctgaatctgaatttcaaatcttttcTT- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762517 206 + 9889416 cacttatttgtacttcatagtttacgagttcttttcacatgtaacattcagaatctcataaaaccttgtgacttaggaaggacatgtacatattattagtctgttttcgacttgaggaaacaaaggcccaaggacatgctattagaa-aggatcaaagccagaacttgaattcaaggtttctgaatctgaatttcaaatcttttcTT- i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1111228 208 + 2694913 CACTTCTTTgtacttcccagcttacaaattattttcacatataacattcagactctcataaaatcttgtgacctaggtagaacaagtgtatattattagcctgatttagagttgaagaaacaaaggcccaaggtcacactatcagaagaaaatcaaagccagaaccttaattcaaggtttctgaatctgaattccaaattttttccac i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20764838 206 - 38779656 cacttctttatagtatacaggttat-ggttgttttcacctataacattcagaattttataaaatcttgtaacctaggtagaacaactacatattatgagcctgatttatggttaaagaaacagaagcccaaggtcacactatcagaa-aaaatcaaagccacatctttaattcaaagtttctgaatctgaattccaaattgtttccac i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840470 205 + 39895921 CACTTAAGCgtacttcagaattcacaagttc-tttcacatctaacattcagaatctcaccaagttttgtgacataggtaagataagtacctactataatcctggtttacagttgaagcaacaaaggcccaaggttacactatgaaaa-aaga-aaaagccaaaacttgactccaaagtgtctgaatctgaattccaaatcttttccgc i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3630119 194 - 6883506 cACTTCTTTgcgctttattgtgtacaagttcttttcacagatagcattcagaatctcataaaatcttgtgatcttggtagaacatgtacatgctattagccttatttatagttgaagaaacaaaggtccaaggtcacattatcaaaa-aggaaaaaagctagaacttgaactcaaggtttctgaataggaattac------------- i dasNov3.JH568778 I 939 C 0 e micMur3.chr31 19213232 1203 + 47401472 I e saiBol1.JH378168 5046641 1341 + 13128814 I e mm10.chr16 78136405 103 + 98207768 I a score=639274.000000 s hg38.chr21_KI270874v1_alt 108508 57 + 166743 tataTATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATAGTACCTGAAA-TGT-GA s panTro5.chr21 3734154 57 + 33445071 tatacATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATAGTACCTGAAA-TGT-GA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17359969 57 + 46275980 tatacATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATAGTACCTGAAA-TGT-GA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299363 57 - 13858734 tataTATAACTGGAAAAGAGTATCTGGATTCCTTACCTAATAGTACCTGAAA-TGT-GA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482479 58 + 32716333 TATGTATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATAGTACCTGAAA-TGTGGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437292 57 - 185818997 TAACTATAACTGG-AAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAATTGT-GA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261608 57 - 192294377 TACATATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAA-TGT-GA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742603 57 + 9440265 TACATATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAA-TGT-GA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472116 57 + 21915920 tacaTATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAA-TGT-GA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046899 57 - 90373283 tacaTATAACTGGAAAAGACCATCTGGATTCTTTACCTAATACTACCTGAAA-TGT-GA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226871 57 + 4234846 tacaTATAACTGGAAAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAA-TGT-GA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230061 57 - 13750039 CACATATGACTGGAAAAGAGTATCTGGATTCTTTACCTAATACTACCTGAAA-TGT-GA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946163 57 + 50472720 TATATATAACTGGAAAAGATTCTCTGGATTCTTTACCTAATGCTATCGGAAA-TGT-GA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5047982 57 + 13128814 tatatataACTGGAAAAGATTCTCTGGATTCTTTACCTAATGCTATCTGAAA-TGT-GA i saiBol1.JH378168 I 1341 C 0 s cebCap1.NW_016107322v1 9624783 57 - 14377064 TATATATAACTGGAAAAGATTCTCTGGATTCTTTACCTAATGCTATCTGAAA-TGT-GA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762723 57 + 9889416 TATATATAACTGGAAAAGATTCTCTGGATTCTTTACCTAATGCTATCTGAAA-TGT-GA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1111436 57 + 2694913 tATGTATAGCTGGAAAAGATTATTTGGACTTTTTACCTAATAGTTTCTGAAA-TGT-GA i proCoq1.NW_012144079v1 C 0 I 87 s otoGar3.GL873528 20765044 57 - 38779656 tataTACAGCTGGAAAAGATTCTTTGGATTCTTTCTCTAGTCATTTCTGAAA-TGT-GA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840675 53 + 39895921 tataTAGAGATGGAAGGCATTGTTTTGATTCTCTCCCTAACAGTACCTGAGG-A----- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3630313 16 - 6883506 -------------------------------ttttcc--acagtacGTA---------- i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19213232 1203 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=940327.000000 s hg38.chr21_KI270874v1_alt 108565 84 + 166743 GTATACATATTGAATAACTATGATAGGGCTATTGGGACTCACCAGTCTCAGTGACCAAATTGTGG-CAG-AAAAAAAT-AACATAAT s panTro5.chr21 3734211 84 + 33445071 GTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGTCACCAAATTGTGG-CAG-AAAAAAAT-AACATAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360026 84 + 46275980 GTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGTGACCAAATTGTGG-CAG-AAAAAAAT-AACATAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299420 84 - 13858734 GTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGTGACCAAATTGTGG-CAG-AAAAAAAT-AACATAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482537 84 + 32716333 GTATACATGTGGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGTGACCAAATTGTGG-CAG-AAAAAAAT-AACATAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437349 84 - 185818997 AGATACATATTGTA-AACCATGATAGGACTATTGGGACTCACCAGTCTCA-GGACCAAATTGTGGCCAG-AAAAAAATAAACATAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261665 84 - 192294377 GTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGGGACCAAATTGTGG-CAG-AAAAAAAT-AACATAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742660 84 + 9440265 GTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGGGACCAAATTGTGG-CAG-AAAAAAAT-AACATAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472173 85 + 21915920 GTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGGGACCAAATTGTGG-CAG-AAAAAAAATAACATAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15046956 86 - 90373283 GTATACATATTGAATAACCATGATAGGACTATTGGAACTCACCAGTCTCAGGGACCAAATTGTGG-CAGAAAAAAAAATAACAGAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2226928 85 + 4234846 GTATACATATTGAATAACCATGATAGGACTACTGGGACTCACCAGTCTCAGGGACCAAATTGTGG-CAG-GAAAAAAATAACAGAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230118 85 - 13750039 GTATACATATTGAATAACCATGATAGGACTATTGGGACTCACCAGTCTCAGGGACCAAATTGTGG-CAG-AAAGAAAATAACATAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946220 84 + 50472720 GTGTACATATTGAATAACCATGACAGGCCTACTGAGGCATACTACACTCAGTGACCAAATTGTGG-CAG-AAAAAAAT-AAAATAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048039 84 + 13128814 GTATACATATTGAATAACCATGATAGGACTATTGAGACATACTACCCTCAGTGACCAAATTGTGG-CAG-AAAAAAAT-AAAATAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624840 85 - 14377064 GTATACATATTGAATAACCATGATAGGACTATTGAGACATACTACTCTCAGTGACTAAATTGTGG-CAGAAAAAAAAT-AAAATAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762780 84 + 9889416 GTATACATATTGAATAACCATGATAGGACTATTGAGACATACTACCCTCAGTGACCAAATTGTGG-CAG-AAAAAAAT-AAAATAAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20765101 69 - 38779656 -------------TTAATCAGGATAGGATGACTGGGATTCACTACTCTCAGCAATCAACTTGTGG-CAG-AAAAAATT-AAACTC-- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840728 83 + 39895921 ATATCAATACTGAATAACCACAGTAGAACTGTTGGGGTTCACTGCTCTCAGTGACCGAATTGTAG-TAG-AAATATA--AACATAAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3630329 84 - 6883506 GTATAGACATTGAATAGTCATGGTAGAACTGTTTGGATTCACTACTCTTAATGACTGAGTTGTGA-CAG-AGAAAATT-AATGTAAT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1111493 87 + 2694913 I e micMur3.chr31 19213232 1203 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=93710.000000 s hg38.chr21_KI270874v1_alt 108649 10 + 166743 GAATGATTGG-------- s panTro5.chr21 3734295 10 + 33445071 GAATGATTGG-------- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360110 10 + 46275980 GAATGATTGG-------- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299504 10 - 13858734 GAATGATTGG-------- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482621 10 + 32716333 GAATGATTGG-------- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437433 10 - 185818997 GAATCACTGG-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261749 10 - 192294377 GAATCACTGG-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742744 10 + 9440265 GAATCACTGG-------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472258 10 + 21915920 GAATCACTGG-------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047042 10 - 90373283 GAATCACTGG-------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2227013 10 + 4234846 GAATCACTGG-------- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230203 10 - 13750039 GAATCACTGG-------- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946304 10 + 50472720 GAACAATTGG-------- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048123 10 + 13128814 GAATGATTGG-------- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624925 10 - 14377064 GAATGATTGG-------- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762864 10 + 9889416 GAATGATTGG-------- i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1111580 10 + 2694913 TAATGATCAC-------- i proCoq1.NW_012144079v1 I 87 I 2 s otoGar3.GL873528 20765170 10 - 38779656 TAAAGATCTG-------- i otoGar3.GL873528 C 0 I 3 s canFam3.chr31 13840811 10 + 39895921 GAATGATCAG-------- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3630413 18 - 6883506 GAGTGATTACAAAAAGTG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19213232 1203 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=12444.000000 s hg38.chr21_KI270874v1_alt 108659 9 + 166743 --TTTCTTT----TT s panTro5.chr21 3734305 9 + 33445071 --TTTCTTT----TT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360120 9 + 46275980 --TTTCTTT----TT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299514 8 - 13858734 --TTTC-TT----TT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482631 8 + 32716333 --TTTC-TT----TT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437443 6 - 185818997 --TTTC-TT------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261759 7 - 192294377 --TTTCTTT------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742754 7 + 9440265 --TTTCTTT------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472268 7 + 21915920 --TTTCTTT------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047052 9 - 90373283 --TTTCTTTTT---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2227023 9 + 4234846 --TTTCTTTTT---- i manLeu1.NW_012102865v1 C 0 I 3762 s colAng1.NW_012120598v1 230213 9 - 13750039 --TTTCTTT--TT-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946314 7 + 50472720 --TTTCTTT------ i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5048133 7 + 13128814 --TTTCTTT------ i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9624935 7 - 14377064 --GGTTTTT------ i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8762874 7 + 9889416 --TTTCTTT------ i aotNan1.NW_018487195v1 C 0 I 1 s micMur3.chr31 19214435 7 + 47401472 --TCTTTTT------ i micMur3.chr31 I 1203 C 0 s proCoq1.NW_012144079v1 1111592 7 + 2694913 --TCTTTTT------ i proCoq1.NW_012144079v1 I 2 C 0 s otoGar3.GL873528 20765183 7 - 38779656 --CTTTTTT------ i otoGar3.GL873528 I 3 C 0 s canFam3.chr31 13840821 7 + 39895921 --TTTCCTT------ i canFam3.chr31 C 0 I 2 s dasNov3.JH568778 3630431 9 - 6883506 ATTACCTTT------ i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78136405 103 + 98207768 I a score=23837.000000 s hg38.chr21_KI270874v1_alt 108668 2 + 166743 TT s panTro5.chr21 3734314 2 + 33445071 TT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360129 2 + 46275980 TT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299522 2 - 13858734 TT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482639 2 + 32716333 TT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437449 2 - 185818997 TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261766 2 - 192294377 TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742761 2 + 9440265 TT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472275 2 + 21915920 TT i cerAty1.NW_012002954v1 C 0 C 0 s calJac3.chr21 21946322 2 + 50472720 TT i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5048141 2 + 13128814 TT i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9624943 2 - 14377064 TT i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8762882 2 + 9889416 TT i aotNan1.NW_018487195v1 I 1 C 0 s micMur3.chr31 19214442 2 + 47401472 TT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1111599 2 + 2694913 TT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20765190 2 - 38779656 CT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840830 1 + 39895921 -T i canFam3.chr31 I 2 C 0 s dasNov3.JH568778 3630440 2 - 6883506 TT i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78136405 103 + 98207768 I e colAng1.NW_012120598v1 230222 0 - 13750039 C e manLeu1.NW_012102865v1 2227032 3762 + 4234846 I e chlSab2.chr2 15047061 0 - 90373283 C a score=491128.000000 s hg38.chr21_KI270874v1_alt 108670 34 + 166743 CAGTGATTTGCTTTTGCAGTCATTGA-TGATTCTT s panTro5.chr21 3734316 34 + 33445071 CAGTGATTTGCTTTTTCAGTCATTGA-TGATTCTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360131 34 + 46275980 CAGTGATTTGCTTTTTCAGTCATTGA-TGATTCTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299524 34 - 13858734 CAGTGATTTGCTTTTGCAGTCATTGA-TGATTCTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482641 34 + 32716333 CAGTGATTTGCTTTTGCAGTCATTGA-TGATTCTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437451 35 - 185818997 CAGGGTTGGCCTCTTGCAGTCATTGACCGATTCTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261768 34 - 192294377 CAGGGATTTGCTCTTGCAGTCATTGA-CGATTCTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742763 34 + 9440265 CAGGGATTTGCTCTTGCAGTCATTGA-CGATTCTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472277 34 + 21915920 CAGGGATTTGCTCTTGCAGTCATTGA-TGATTCTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047061 34 - 90373283 CAGGGATTTGCTCTTGCAGTCACTGA-TGATTCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2230794 34 + 4234846 CAGGGATTTGCTCTTGCAGTCATTGA-CGATTCTT i manLeu1.NW_012102865v1 I 3762 C 0 s colAng1.NW_012120598v1 230222 34 - 13750039 CAGGGATTTGCTCTTGCAGTCATTGA-TGATTCTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946324 34 + 50472720 CAGTGATTTGCTCTTGCAGTCACTGA-TGATTCTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048143 34 + 13128814 CAGTGATTCGCTCTTGCATTCGTTGA-TGATTCTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624945 34 - 14377064 CAGTGATTTGCTCTTGCAGTCGTTGA-TGATTCTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762884 34 + 9889416 CAGTGATTTGCTCTTGCAGTCATTGA-TGATTCTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19214444 34 + 47401472 CTGTGATTTGCTCATGTGGTCATAGA-TGATTCTT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1111601 34 + 2694913 CAGTGATTTTCTCATGTGGTCATAGA-TGATTCCT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20765192 34 - 38779656 CAGTGATTTGCTCATGCGGTTACAGG-TGATTCTT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840831 34 + 39895921 CAGTGATTTTCTCATGTGATCATGGG-TAATTTGT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3630442 34 - 6883506 CAGTGATTTGCTTATGTAGTCATGAC-TGATTCTT i dasNov3.JH568778 C 0 M 715 e mm10.chr16 78136405 103 + 98207768 I a score=1000691.000000 s hg38.chr21_KI270874v1_alt 108704 80 + 166743 AAGTG-CCAGTCTTCCTGTGCACTATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAA---GGAAGAAA s panTro5.chr21 3734350 80 + 33445071 AAGTG-CCAGTCTTCCTGTGCACTATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAA---GGAAGAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360165 80 + 46275980 AAGTG-CCAGTCTTCCTGTGCACTATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAA---GGAAGAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299558 80 - 13858734 AAGTG-CCAGTCTTCCTGTGCACTATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAA---GGAAGAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482675 79 + 32716333 AAGCA-CCAGTCTTCCTGTGCACCAT-ACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAA---GGAAGAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437486 84 - 185818997 AGGTGCCCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCGGAGATTCCTATCTTAAAGCGAAAGAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261802 80 - 192294377 AGGCG-CCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGATCCTAATCTAAA---GGAAGAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742797 80 + 9440265 AGGTG-CCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGATCCTAATCTAAA---GGAAGAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472311 80 + 21915920 AGGTG-CCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGATCCTCATCTAAA---GGAAGAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047095 80 - 90373283 AAGTG-CCAGTCTTCCTGTGCACCCTAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAA---GGAAGAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2230828 80 + 4234846 AGGTG-CCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGATCCTAATCTAAA---GGAAGAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230256 80 - 13750039 AAGTG-CCAGTCTTCCTGTGCACCATAACACAGGCTGACAGGTACTGCCTCCCCTCAGAGCTCCTAATCTAAA---GGAAGAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946358 80 + 50472720 AAGCA-TCAGTCTTCTTGAGCACCATAACACAGGCTGACAGGTACTGCTTGCACTCAGAGCTCCTAACCTAAA---AGAAGAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048177 80 + 13128814 AAGCC-TCTGTCTTCTTGAGCACCATAACACAAGCTGACAGATACTGCTTGTACTCAGAGCTCCTAATCTAAA---AGAGGAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9624979 80 - 14377064 AAGCA-TCAGTATTCTTGAGCACCATAACTCAGGCTGACAGGTACTGCTTGCACTCAGAGCTCCTAATCTAAA---AGAAGAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762918 80 + 9889416 AAGTG-TCAGTCTTCTTGAGCACCATAACACAGGCTGATCGGTACTGCTTGCACTCAGAGCTCCTAATCTAAA---AGAAGAAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19214478 80 + 47401472 AAGCA-TCAGTCTTGCTGCGCATCCTAACACAGGCTGACAGGTATTGcctgccctcagagcttatactctaaa---agaagaaa i micMur3.chr31 C 0 I 1981 s proCoq1.NW_012144079v1 1111635 80 + 2694913 AAGCA-TCAGTCTTGTTGAGCATCCTAACACAGGCTGACAGGTACTGcctgccctcagagcttataatctaaa---agaagaaa i proCoq1.NW_012144079v1 C 0 I 75 s otoGar3.GL873528 20765226 77 - 38779656 CAGTA-TCAGGCTTGCTGAGCACCCTCACACAGGTTGACAGGTCCTGCCTGCCCTCAGAACTTGTCATCTAGG---AGAAA--- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840865 44 + 39895921 AAGCA-CCAGTCTTGCTCAGCACTGTAACATGGGTTGACAAG----------------------------AAA----------- i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3630476 715 - 6883506 M e mm10.chr16 78136405 103 + 98207768 I a score=571786.000000 s hg38.chr21_KI270874v1_alt 108784 72 + 166743 TACAGTA----------------------CATATCTGTGCATCCAGAACATGGAGAGGTGCTGTAGCAGAGTGTC-----AAA--AAAGAATAAGCCACAT s panTro5.chr21 3734430 72 + 33445071 TACAGTA----------------------CATATCTGTGCATCCAGAACATGGAGAGGTGCTGTAGCAGAGTGTC-----AAA--AAAGAATAAGCCACAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360245 72 + 46275980 TACAGTA----------------------CATATCTGTGCATCCAGAACATGGAGAGGTGCTGTAGCAGAGTGTC-----AAA--AAAGAATAAGCCACAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299638 72 - 13858734 TACAGTA----------------------CATAACTGTGCATCCAGAACATGGAGAGGTGCTGTAACAGAGTGTC-----AAA--AAAGAATAAGCCACAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482754 72 + 32716333 TACAATA----------------------CATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGAGTGTC-----AAA--AAAGAATAAGTCACAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437570 86 - 185818997 TACAATAAcccccccccccccccccccccAATATCTGTGCATCTAGAACATG--AGAGTGCTGTAGCA-GGTGTC-----AA-------GATAAGCCACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261882 69 - 192294377 TACAATA----------------------CATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGGGTGTC-----AA-----AGAATAAGCCACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742877 69 + 9440265 TACAATA----------------------CATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGGGTGTC-----AA-----AGAATAAGCCACAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472391 69 + 21915920 TACAATA----------------------CATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGGGTGTC-----AA-----AGAATAAGCCACAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047175 69 - 90373283 TACAATA----------------------CATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGGGTGTC-----AA-----AGAATAAGCCACAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2230908 69 + 4234846 TACAATA----------------------CATATCTGTGCATCTAGAACATGGAGAGGTGCTGTAGCAGGGTGTC-----AA-----AGAATAAGCCACAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230336 69 - 13750039 TGCAATA----------------------CATATCTGTGCATCTATAACATGGAGAGGTGCTGTAGCAGGGTGTC-----AA-----AGAATAAGCCACAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946438 75 + 50472720 TACAATA----------------------CATAA-TGTGGATCTAGAACATGGAGAGGTGCTGTAGT-GGGTGCTAGACAAAA--AAAGAATAAGCCACAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048257 74 + 13128814 TACAATA----------------------CATAA-TATGGATCTAGAACATGGAGAGGTGCTGTAGT-GGGTGTTAGAC-AAA--AAAGAATAAGCCACAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9625059 74 - 14377064 TACAATA----------------------CATAA-TATAGATCTAGAACATGGAGAGGTGCTGTAGT-GGGTGTTAGAC-AAA--AAAGAATAAGCCACAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8762998 74 + 9889416 TACAATA----------------------CATAA-TGTGGATCTAGAACATGGAGAGGTGCTTTAGT-GGGTGTTAGAT-AAA--AAAGAATAAGCCACAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20765303 62 - 38779656 -----------------------------CA----CGTGCGTACATATGATGGTGAGGAACTGTAGA-GGACGTC-----AGATGAAAGAAGGTGCAGCCT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840909 73 + 39895921 TAGGATC----------------------TATAA-CATGCATACATAACATGGAGAGGTGTTGCAGAGAAGTGTC-----AGCCAAAAGAACATGCAGCAT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1111715 75 + 2694913 I e dasNov3.JH568778 3630476 715 - 6883506 M e micMur3.chr31 19214558 1981 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=1211795.000000 s hg38.chr21_KI270874v1_alt 108856 101 + 166743 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGCGAAAGAACT----TGTCATCTTAG s panTro5.chr21 3734502 101 + 33445071 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGCGAAAGAACT----TGTCATCTTAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360317 101 + 46275980 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGCGAAAGAACT----TGTCATCTTAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299710 101 - 13858734 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAGCTTGGCAGATGCCTGCAGTCCCTTCCCAGTGAAAGAACT----TGACATCTTAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482826 101 + 32716333 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGAGAAAGAACT----TGTCATCTTAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437656 96 - 185818997 AGAG-AGAGAAAT-CTGAG-AAATA-TGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGT-CCTTCCCAGTGAAAGAACT----TGTCGTCTTCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162261951 101 - 192294377 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAAGAACT----TGTCATCTTCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8742946 101 + 9440265 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAAGAACT----TGTCGTCTTCG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472460 101 + 21915920 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAAGAACT----TGTCGTCTTCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047244 101 - 90373283 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAAGAACT----TGTCATCTTCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2230977 100 + 4234846 AGAGAAGGGAAATCCTGAAAAAATATTGTGGTATATAGTAGATCGCCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGTGAAA-AACT----TGTCATCTTCG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230405 101 - 13750039 AGAGAAGAGAAATCCTGAGAAAATATTGTGGTATATAGTAGATCACCAGAACTTGGCAGATGCCTGGGGTCCCTTCCCAGCGAAAGAACT----TGTCATCTTAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946513 101 + 50472720 AGAGAAGATCAATCCTGAGAAAATATTGTGGTATATAATAGATCACCAGAACTTGACAGATGCCTGGGGTCCCTTCTCTGGGAAAGAACT----TGCCATCTTGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048331 100 + 13128814 AGAGAAGATAAATCCCGAGAAAATA-CGTGGTATATAATAGATCACCGGAACTTGACAGATGCCTGGGGTCCCTTCCCTGGGAAAGACCT----TGCCATCTTGG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9625133 100 - 14377064 AGAGAAGATAAATCCTGAGAAAATA-TGTGGTACATAATAGATCACCAGAACTTGACAGATGCCTGGGGTCCCTTCTCTGGGAAAGAACT----TGCCATCTTGG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8763072 101 + 9889416 AGAGAAGATAAATCCTGAGAAAATATTGTGGGATATAATAGATCACCAGAACTTGACAGATGCCTGGGGTCCCTCCTCTGGGAAAGAACT----TGCCATCTTGG i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1111790 105 + 2694913 AGAGAAGAGAAATGCTGAGAAAACATTGTGGTACGTAATAAATTACCAGAACTTGCCAGATGCCTGGCGTCCCTTCCTAGGAAAAGAATTTGTCTGTCACCTTGG i proCoq1.NW_012144079v1 I 75 C 0 s otoGar3.GL873528 20765365 100 - 38779656 --AGAAAAAAAGTGCAGAG-CAACATTGCTGAATATGATCGATCACCAGAACCAGCCAGATGCTGG--GGCCTTTCCTAGGAAAAGAACTGACCTATCATCTTGG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13840982 100 + 39895921 AGAAAAGAGAAATGCTGAG-AAACATTGTAGTCTGTAATAGTTTACCGGAACCTGGCATATGCCTAGGGTTCCTTCCTAGGAAAGAAACA----TGTCATTTTGA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3630476 715 - 6883506 M e micMur3.chr31 19214558 1981 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=1030701.000000 s hg38.chr21_KI270874v1_alt 108957 78 + 166743 ACTAATGCATATAAGATCAGTGGATCTTGTCTTCATCCTTTGTAAAACTAATGTGTAGATTTCTAA-GACAATTTCTAG s panTro5.chr21 3734603 78 + 33445071 ACTAATGCATATAAGATCAGTGGATCTTCTTTTCATCCTTTATAAAACTAATGTGTAGATTTCTAA-GACAATTTTTAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360418 78 + 46275980 ACTAATGCATATAAGATCAGTGGATCTTCTTTTCATCCTTTATAAAACTAATGTGTAGATTTCTAA-GACAATTTTTAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299811 78 - 13858734 ACTAATGCATATAAGATCAGTGGATCTTGTTTTCATCCTTTATAAAACTAATGTGTAGATTTCTAA-GACAATTTTTAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4482927 78 + 32716333 ACTAACGCATATAAGATCAGTGGATCTTGTTTTCATCCTTTATAAAACTAACGTGTAGATTTCTAA-CACAATTTTTAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437752 78 - 185818997 ACTAATGCATATAAGATCAGCGGACATTGTTTTCATCCTTTATAAAACGAATGTGTAGATTTCTAA-GACAATTTTTAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162262052 78 - 192294377 ACTAATGCATGTAAGATCAGCGGACCTTGTTTTCATCCTTTATAAAACGAATGTGTAGATTTCTAA-GACAATTTTTAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8743047 78 + 9440265 ACTAATGCATATAAGATCAGCGGACCTTGTTTTCATCCTTTATAAAACGAATGTGTAGATTTCTAA-GACAATTTTTAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472561 78 + 21915920 ACTAATGCATATAAGATCAGTGGACCTTGTTTTCATCCTTTATAAAACGAATGTGTAGATTTCTAA-GACGATTTTTAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047345 78 - 90373283 ACTAATGCATATAAGATCAGTGGACCTTGTTTTCATCCTTTATAAAACTAATGTGTAGATTTCTAA-GATGATTTTTAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2231077 78 + 4234846 ACTAATGCATATAAGATCAGTGGACCTTGTTTTCATCCTTTATAAAACTAATGTGTAGATTTCTAA-GACGATTTTTAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230506 78 - 13750039 ACTAATGTGTATAACATGAGTGGACCTTGTTTTCATCCTTTATAAAACTAAGGTGTAGATTTCTAA-GACAATTTTTAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946614 78 + 50472720 ACTAATGCATATGAGATCAGTGGACCTTGTTTTCATCCTTTATAAAACCAGTGTGTGGATTTCTAC-GACAATTTCCAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048431 78 + 13128814 ACTAATCCATATAAGATCAGTGGACCTTGTTTTCATCCTTTATAAAACTACTGTGTGGATTTCTAT-GACAATTTCCAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9625233 78 - 14377064 ACTAATGTATATAAGATCAGTGGACCATGTTTTCATCCTTTATAAAACTAATGTGTGGATTTCTAA-GACAATTTCCAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8763173 77 + 9889416 ACTAATGCATATAAGATCAGTGGACC-TGTTTTCATCCTTCATAAAACTAATGTGTGGATTTCTAA-GACAATTTCCGG i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1111895 78 + 2694913 ACTAATACATGTAAGATCAGTGAGACTTCTTTTCATCCTTTGTAAAACTGAAGTGTGGGTTTCTAA-GACAATTTCCAG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20765465 76 - 38779656 GATAATACATGTAAAACCGGCGAGCCTCATTTTCTTCCTTTATAATACTGA--TGTGACTTTCTAA-GACATTTTCCAG i otoGar3.GL873528 C 0 I 294 s canFam3.chr31 13841082 77 + 39895921 ATTAATGCACATAAAACCAGTGGGTCTTGTTTTCACCTTATGTGAAACTGAATTGTGGATCTCTAA--ACAATGTCCAG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3631191 79 - 6883506 ATTGACTCACTTAGAATCACTGGGCCGTATTTTCATCTGCTATAAAACTGAGGAGTGGATCTCTAAAGATAATTTTCAG i dasNov3.JH568778 M 715 C 0 e micMur3.chr31 19214558 1981 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=1386247.000000 s hg38.chr21_KI270874v1_alt 109035 109 + 166743 --CTTC------AC-ATTATTATTATCCTATactctcatacaccattggaggagtatcaat---tagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaacatgt--acacattgac s panTro5.chr21 3734681 109 + 33445071 --CTTC------AC-ATTATTATTATCCTATactctcatacactattggaggagtatcaat---tagtaaaatc-tttttggtgaacgacttgcaaaatcaaaaaaccacgt--acacattgac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360496 109 + 46275980 --CTTC------AC-ATTATTATTATCCTATactctcatacactattggaggagtatcaat---tagtaaaatc-tttttggtgaacgacttgcaaaatcaaaaaaccacgt--acacattgac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299889 108 - 13858734 --CTTC------AC--TTATTATTATCCTATactctcatacactattggaggagtatcaat---tagtaaaatc-tttttggtgaacaacttgcaaaatcaaaaaaccacgt--acacattgac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483005 111 + 32716333 --CTTC------AC-ATTATTATTATCCTATattctcatacaccattggaggagtgtcaat---tagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccacgtacacacattgac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437830 109 - 185818997 --CTTC------AC-ATTATTATTATCCTATCctctcatacacctttggaggagcatcagt---tagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162262130 109 - 192294377 --CTTC------AC-ATTATTATTATCCTATactctcatacacctttggaggagcatcagt---tagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8743125 109 + 9440265 --CTTC------AC-ATTATTATTATCCTATactctcatacacctttggaggagcatcagt---tagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472639 109 + 21915920 --CTTC------AC-ATTATTATTATCCTATactctcatacacctttggaggagcatcagt---tagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacactgac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047423 109 - 90373283 --CTTC------AC-ATTATTATTATCCTATactctcatacacctttggaggagcatcagt---tagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2231155 106 + 4234846 --CTTC------AC----ATTATTATCTTATactctcatacacctttggaggagcatcagt---tagtaaaatc-tttttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230584 109 - 13750039 --CTTC------AC-ATTATTATTATCCTATactctcatacacttttggaggagcatcaat---tagtaaaatc-ttcttggagaacaacttgcaaaatcaaaaaaccatgt--acacattgac i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946692 116 + 50472720 --CTTCATATTATT-ATTATTATTATCCTATactctcatacatccttggaggggtgtcaat---tagtaaaatcttttttggagaacaacttgcaaaatcaaaaaaccacat--gcacattgac i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048509 110 + 13128814 --CTTC------CC-ATTATTATTATCCTATactgttatacatccttggaggagtgtcaat---tagtaaaatcttttttggagaagaacttgcaaaatcaaaaaaccacat--gcacattgac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9625311 110 - 14377064 --CTTC------AC-ATTATTATTATCCTATactctcatacatacttggaggagtgtcaaa---tagtaaaatctttttttgggaacaacttgcaaaatcaaaaaaccactt--gcacattgac i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8763250 109 + 9889416 --TTTC------AC-ATTATTATTATCCTATactctcatacatccttggaggagtgtcaat---tagtaaaatc-tttttggagaacaacctgcaaaatcaaaaaaccacat--gcacattgac i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1111973 105 + 2694913 --TTTT------AC-ATTATTCTTA---TAtactctcatataccatt-aaagagtgtaaat---tactaaaatc-tgtttggagaacaacttgcaaaattgaaaaaccacat--acacactgac i proCoq1.NW_012144079v1 C 0 I 859 s otoGar3.GL873528 20765835 102 - 38779656 --CTTT------AC-ATTATTCTTA---TATACACTCATATACCACT-GAAGAATGAAAAT---TATGAAAATC-TGTTTGGAA---AACTTGAAAAATTCAAAAAACACAT--ATATACTGAC i otoGar3.GL873528 I 294 C 0 s canFam3.chr31 13841159 104 + 39895921 --CTTT------AC-ATTGTTATAA---TATactttcacacaccatgtgaggaatgtaaat---tagtaaaaat-cttttgaggg--aatttgcaaaatgaaagaaacacat--acacattgtc i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3631270 114 - 6883506 CTTTTC------ATTATTATTATTATTATgtactctcatacaccactgaaatattgtaaatatataaaataatc-tttttggagaacaacttgcaaaattgaa-aaccacgt--acacattgac i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19214558 1981 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=356328.000000 s hg38.chr21_KI270874v1_alt 109144 28 + 166743 tctgcaatttcactGGATccacttattt s panTro5.chr21 3734790 28 + 33445071 tctgcaatttcactGGATccacttattt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360605 28 + 46275980 tctgcaatttcactGGATccacttattt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3299997 28 - 13858734 tctgcaatttcactGGATccacttattt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483116 28 + 32716333 tctgcaatgtcactGGATccacttattt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437939 28 - 185818997 tctgcaatttcactGGATccacttattt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162262239 28 - 192294377 tctgcaatttcactGGATccacttattt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8743234 28 + 9440265 tctgcaatttcactGGATccacttattt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472748 28 + 21915920 tctgcaatttcactGGATccacttattt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047532 28 - 90373283 tctgcaatttcactGGATccacttattt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2231261 28 + 4234846 tctgcaatttcactGGATccacttattt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230693 28 - 13750039 tctgcaatttcgctGGATccacttattt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946808 28 + 50472720 tctgcaatttcactGAATccacttattc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048619 28 + 13128814 tctgcaatttcactGAATccacttattt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9625421 28 - 14377064 tctgcaatctcactGAATccacttattt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8763359 28 + 9889416 tctgcaatttcactGAATccacttattt i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20765937 28 - 38779656 CTAGCAGTTTCACAGTGTGCACtttttt i otoGar3.GL873528 C 0 I 175 s canFam3.chr31 13841263 28 + 39895921 ccagcaGTTTTGCTGGGTctacttcttt i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3631384 27 - 6883506 -ctggcaattccTTGGGTTCATTAattt i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1112078 859 + 2694913 I e micMur3.chr31 19214558 1981 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=7730468.000000 s hg38.chr21_KI270874v1_alt 109172 700 + 166743 ccacctctactattagggctggtcaaagtcacaatcatgtcttatctggactacaatggtagccttcttacactggtcctcctgcttccacttcagtgccactacagtatcttctttctacagtgatgggagaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttacgataacacttgaaagaaaattcaaatttcttctctgacttacaaagcccccagaagtctgtctttgtttctaatctcaatcattctact--ctcttgcatgc---accacacattgactaccctggccttctttctgtttct---acatttgggctttgcacaagctgtcccatctgcctcaaataccc-tt--ctgtgcttatcccttcaaatttcaac-ttaaatgtcacctcttcaaacgggctgtacctgacaacccaatctaaaggtgactacctaaccaatctgcagcatatcac---tgttttaattctctgcacggcattatccacaatgtgatactttccttatttatttatttatACAATTA-ATTTTTCATGCATCTATTTTTGAATATATGTATGCATGTTCAtacatattttctatttatttgtttat---tttttccttccctctatgcactccagagaatttaagtttataagaacagggaATccgggcatggtggcgcatgcctgt s panTro5.chr21 3734818 688 + 33445071 ccacctctactattagggctggtcaaagtcacaatcatgtcttatctggactacaatggtagccttcttacactggtcctcctgcttccacttcagtgccactacagtatcct-----------gatgggagaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatgataatacttgaaagaaaattcaaatttcttctctgacttacaaagcccc-agaagtctgtctttgtttctaatctcaatcattctact--ctcttgcatgc---accacacattgactaccttggccttctttctgtttct---acattcgggctttgcacaagctgtcccatctgcctcaaataccc-tt--ctgtgcttatcccttcaaatttcaac-ttaaatgtcacctcttcaaacgggctgtacctgacaacccaatctaaaggtgactacctaaccaatctgcagcatatcac---tgttttaattctctgcacagcattatccacaatgtgatactttccttatttatttatttatACAATTA-ATTTTTCATGCATCTATTTTAGAATATATGTATGTCTGTTCAtacatattttctatttatttgtttat---tttttccttccctctatgcactccagagaatttaagtttataagaacagggaATccgggcatggtggcgcatgcctgt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17360633 688 + 46275980 ccacctctactattagggctggtcaaagtcacaatcatgtcttatctggactacaatggtagccttcttacactggtcctcctgcttccacttcagtgccactacagtatcct-----------gatgggagaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatgataatacttgaaagaaaattcaaatttcttctctgacttacaaagcccc-agaagtctgtctttgtttctaatctcaatcattctact--ctcttgcatgc---accacacattgactaccttggccttctttctgtttct---acattcgggctttgcacaagctgtcccatctgcctcaaataccc-tt--ctgtgcttatcccttcaaatttcaac-ttaaatgtcacctcttcaaacgggctgtacctgacaacccaatctaaaggtgactacctaaccaatctgcagcatatcac---tgttttaattctctgcacagcattatccacaatgtgatactttccttatttatttatttatACAATTA-ATTTTTCATGCATCTATTTTTGAATATATGTATGCCTGTTCAtacatattttctatttatttgtttat---tttttccttccctctatgcactccagagaatttaagtttataagaacagggaATccgggcatggtggcgcatgcctgt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300025 696 - 13858734 ccacctctactattagggctggtcaaagtcacaatcatgtcttatctggactacaatggtagccttcttacactggtcctcctgcttccacttcagtgccactacagtatcttctttctacagtgatgggagaaatcatcctaaatggcaaatcagatggtactacttccctacttaaaaatctcctcatgattt---ataatacttgaaagaaaattcaaatttcttctctgacttacaaagcccc-agaagtctgtctttgtttctaatctcaatcattctact--ctcttgcatgc---accacacattgactaccctggccttctttctgtttct---acattcgggctttgcacaagctgtcccatctgcctcaaataccc-tt--ctgtgcttatcccttcaaatttcaac-ttaaatatcacctcttcaaacaggctgtacctgacaacccaatctaaaggtgactacctaaccaatctgcagcatatcac---tgttttaattctctgcacagcattatccacaatgtgatactttccttatttatttatttatACAATTA-ATTTTTCATGCATCTATTTTTGAATATATGTACGCATGTTCAtacatattttctatttatttgtttat---tttttccttccctctatgcactccagagaatttaagtttataagaacagggaATccgggcatggtggcgcatgcctgt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483144 702 + 32716333 ccacctctactattagggctcgtcaaagtcacaatcatgtcttatctggactactatggtacccttcttacactggtcctcctgcttccacttcagtgccactacagtatcttctttctacagtgatgggagaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatgataatactagaaagaaaattcaaatttcttctctgacttacaaagcccc-agaagtctgtctttgtttctaatctcaatcattctact--ctcttgcatgc---accacacattgattaccctggccttctttctgtttct---acatttgggctttgcacaagctgtcccatctgcctcaaataccc-tt--ctgtgctcatcctttcaaatttcaac-ttaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaaggtgactacctaaccaatctccagcatatcactgttgttttaattctctgcacagcattatccacaatgtgatactttccttatttatttatttatACAATTA-ATTTTTCATACATCTATTTTTGAATATATGTATGCATGTTCAtacatattttctatttatttgtttat---tttttccttccctctatgcactccagaggatttaactttataagaacagagaATctgggcatggtggcgcatgcctgt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155437967 695 - 185818997 gcgcctctactattagggctggtcaaaatcacaagcatgtcttatctggactactatggtagccttctt--agtggtcctcctgcttctacttcagtgccaccacaagatcttctttctacagtaatgggggaaatcatcctaaaaggcaaatcagatggtagtacttccctacttaaaaatctcctcatgatttatcataatacatgaaagaaaattcaaatttctcctctgactgacaaagcccc-agaagtttgtttttgtttctcatctcaatcattccact--gtcttccatac---accacacattgactaccctggccttctttctgtttct---acatttgagctttgcaccagctgtcccatctgcctcaaatactc-tt--ctgtgctcatccattcaaatttcaac-ctaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaatgtgaccacctaaccagtctccagcatatcactgtcgttttaattctctgtacagcattatccatgatgtgatactttcc----ttatttatttatACAATTA-ATTTTTCATACATCTATTTTTGAATATACATATGCATGTTCAtacatattttctatttatttgtttat---ttttt-tttccctttatgcactccagagaatttaagtttatcagaacagggaagccaggcgtggtggcgcatgccttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162262267 695 - 192294377 gcgcctctactattagggctggtcaaaatcacaagcatgtcttatctggactactatggtagccttctt--agtggtcctcctgcttctacttcagtgccaccacaagatcttctttctacagcaatgggggaaatcatcctaaaaggcaaatcagatggtagtacttccctacttaaaaatctcctcatgacttatcataatacataaaagaaaattcaaatttctcctctgactgacaaagcccc-agaagtttgtttttgtttctcatctcaatcattccact--gtcttccatac---accacacattgactaccctggccttctttctgtttct---acatttgagctttgcaccagctgtcccatctgcctcaaatactc-tt--ctgtgctcatccattcaaatttcaac-ctaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaatgtgaccacctaaccagtctccagcatatcactgtcgttttaattctctgtacagcattatccatgatgtgatactttcc----ttatttatttatACAATTA-ATTTTTCATACATCTATTTTTGAATATACATATGCATGTTCAtacatattttctatttatttgtttat---ttttt-cttccctttatgcactccagagaatttaagtttatcagaacagggaagccaggcgtggtggcgcatgccttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8743262 693 + 9440265 gcgcctctactattagggctggtcaaaatcacaagcatgtcttatctggact--tatggtagccttctt--tgtggtcctcctgcttctacttcagtgccaccacaagatcttctttctacagcaatgggggaaatcatcctaaaaggcaaatcagatggtagtacttccctacttaaaaatctcctcatgatttatcataatacatgaaagaaaattcaaatttctcctctgactgacaaagcccc-agaagtttgtttttgtttctcatctcaatcattccact--gtcttccatac---accacacattgactaccctggccttctttctgtttct---acatttgagttttgcaccagctgtcccatctgcctcaaatactc-tt--ctgtgctcatccattcaaatttcaac-ctaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaatgtgaccacctaaccagtctccagcatatcactgtcgttttaattctctgtacagcattatccatgatgtgatactttcc----ttatttatttatACAATTA-ATTTTTCATACATCTATTTTTGAATATACATATGCATGTTCAtacatattttctatttatttgtttat---ttttt-cttccctttatgcactccagagaatttaagtttatcagaacagggaagccaggcgtggtggcgcatgccttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8472776 690 + 21915920 gcgcctctactattagggctggtcaaaatcacaagcatgtcttatctggactactatggtagccttctt--agtggtcctcctgcttccacttcagtgccaccacaagatcttctttctacagcgatgggggaaatcatcctaaaaggcaaatcagatggtagtacttccctacttaaaaatctcctcatgatttatcataatacttgaaagaaaattcaaatttctcctctgactgacatagcccc-agaagtttgtctttgtttctcatctcaatcattccact--gtcttccatac---accacacattgactaccctggccttctttctgtttct---acatttgagctttgcaccagctgtcccatctgcctcaaataccc---------actcatccattcaaatttcaac-ctaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaatgtgaccacctaaccaatctccagcatatcactgttgttttaattcgctgtacagcattatccatggtgtgatactttcc----ttatttatttgtACAATTA-ATTTTTCATACATCTATTTTTGAATATATGTATGCATGTTCAtacatattttctatttatttgtttat---tttttccttccctttatgcactccagagaatttaagtttataagaacagggaagccaggcgtggtggcgcatgccttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15047560 687 - 90373283 gcatctctactattagggctggtcaaaatcacaagcatgtcttatctggactactatggtagccttcat--agtggtcctcctgcttccacttcagtgccactacaagatcttctttctacagcgatgggggaaatcatcctaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatcataatacttgaaagaaaattcaaatttctcctctgactgacaaagcccc-agaagtttgtttttgtttctaatctcaatcattccact--gtcttccatac---accacacatcgactaccctggccttctttctgtttct---acatttgagctttgcaccagctgtcccatctgccccaaataccc-tt--ctgtgctcatccattcaaatttcaac-ctaaatgtcacctcttcaaacagg------ctgacaacccaatctaaatgtgactacctaaccaatctccagcatatcactgttgttttaattctctgtacagcattatcca---tgtgatactttcc----ttatttatttatACAATTA-ATTTTTCATACATCTATTTTTGAATATAAATATGCATGTTCAtacatattttctatttatttgtgtat---tttttccttccctttatgcactccagagaatttaagtttataagaacagggaagccaggcgtggtggtgcatgccttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2231289 690 + 4234846 gcgcctctactattagggctgatcaaaatcacaagcatgtcttatctggactactatggtagccttctt--agtggtcctcctgcttccacttcagtgccactacaagatcttctttctacagcgatgggggaaatcatcctaaaaggcaaatcagatggtagtacttcccgacttaaaaatctcctcatgatttatcataatacttgaaagaaaattcaaatttatcctctgactgacaaagcccc-agaagtttgtctttgtttctcatctcaatcattccact--gtcttccatac---accacacattgactaccctggccttctttctgtttct---acatttgaactttgcaccagctgtcccatctgcctcaaataccc---------actcatccattcaaatttcaac-ctaaatgtcacctcttccaacaggctgtacctgacaacccaatctaaatgtgaccacctaaccaatctccagcatatcactgttgttttaattcgctgtacagcattatccatggtgtgatactttcc----ttatttatttgtACAATTA-ATTTTTCATACATCTATTTTTGAATATATGTATGCATGTTCAtacatattttctatttatttgtttat---tttttccttccctttatgcacgccagagaatttaagtttataagaacagggaagccaggcgtggtggcgcatgccttt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 230721 696 - 13750039 gcacctgtactattagggctggtcaaaatcacaagcatgtcttatctggattactatggtagccttctt--agtggtcctcctgcttccacttcagtgccactacaagatcttctgtctacagtgatgggggaaatcatcttaaaaggcaaatcagatggtactacttccctacttaaaaatctcctcatgatttatcataatacttgaaagaaaactcaaatttctcctctgactgacaaagcccc-agaagtttgtctttgtttctaatctcaatcattgcact--gtcttccatac---accacacattgactatcctggccttctttctgtttct---acatttgagctttgcaccagctctcccatctgcctcaaataccc-tt--ctgtgctcattcattcaaatttcaac-ttaaatgtcacctcttcaaacaggctgtacctgacaacccaatctaaatgtgactacctaaccaatctccagcatatcactgttgttttaattctctgtatagcattatccatgatgtgatactttcc----ttatttatttatACAATTA-ATTTTTCATACATCTATTTTTGAATATACATATGCATGTTCAtacatattttctatttatttgtttat---ttttttcttccctttatgcactccagagaatttaagtttataagaacagggaagccaggcatggtggcacatgccttt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21946836 679 + 50472720 ccacctctactatgagggctggtcaaagtcacaagcacgccttatctggactactatggtagccttctt--actgctcctcctgcttccacttcagtgccactgcaatctcttctttctacagggatggggacaatcatcctaaaatgcaaatcagatggtactactttcctacttaaaaatatcctcatgatttatcataatacttgaaagaaaattctaatttcttctctgacttacaaagcccc-agaagtctgtctttgtttctgatctaagtcattccact--gtcttgcatgt---accatacatcgactacc-tgaccttctttctgtttct---atgtttggaccttgcacaagctgtcccatctccgtcaaataccc-tt--ctgtgctcatccattcaaatttcaac-ttaaatgtaacctcttcaaacaggctgtacctgacaacccaatctaaaggtgtctacctagccaatctccagcatatcactgttgttttaattctctgcacagcgttatccacaatgtgatgctttcc----ttat------------tta-atttttcatacatctatttTTGAATATATGTATGAGTGTTCAtatatattttgtattta----tttat---tttttccttccctctatgcactccatagaatttaagtttataagagtagggaGGCCACTcatggtggtgcatggctgt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5048647 664 + 13128814 ccacctctactatgagggctggtcaaagtcacaagtatggcttatctgg---actatggtagccttctt--attgctcctcctgcttccacttcaacgccactacaatctcttctttctacagtgatggagacaatcatcctaaaatgcaaatcggatggtactacctccctacttaaaaatatcctcatggtttattataatactagaaagaaaattctaatttcttgtctgacttacaaagcccc-agaagtctgtctttttttctgatctaagccattccact--ctcttgcatgt---accatacatcaactacc-tggccttctttctgtttct---acatttgggccttgcacaagctgtcccatctccctcaaatatgc-tt--ctgtgctcatccattcaaatttcaacaaaaaatgtcacctctttaaacagggtgtacctgacaacccactctaaaggtgtctacctagccaatctctagcatatcactgttgttttagttctctgcacagcaatatccacaatgtgatgctttcc----ttat------------tta-atttttcatacatctatttTTGAATATATGTATGAGTGTTCATACATATTT----------------T---TTTTTCCTTCCCTCTATGCACTCCA-GGAATTTAAGTTTATAAGAACAgggaggccaggcatggtggtaaatggctgt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9625449 675 - 14377064 ccacctctgctatgagggctggtcaaagtcacaagcatgttttatctggactactatgtgagccttctt--actgctcctcctgcttccacttcagtgccactacaatctcttctttctacagtgatggggacaatcgtcctaaaacgcaaatcagatggtactacttccctacttaaaaatatcctcatgatttatcataatacttgaaagaaaattctaatttcttctctgacttacgaagcccc-agaagtctgtctttgtttctgatctaagccattccact--ctcttgcatat---accatacatcgactaca-tggccttctttctgtttct---acgtttgggccttgcacaagctgtcccatctccctcaaataccc-tt--ctgtgctcatccattcaaattttaac-ttaaatatcacctcttcaaacaggctgtacctgacaacccaatctaaatgtgtctacctagccaatctccagcatatcactattgttttaattctctgcacagcattatccacaatgtgaTGCTTTCC--------------------TTA-ATTTTTCATACATCTATTTTTGAATATATGTATGAGTGTTCAtacatattttatattta----tttac---tttttccttccctctatgcactccagagaatttaagtttataagaacagggaGgccaggcatggtggtgcatggctgt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8763387 674 + 9889416 ccacctctactatgagggctggtcaaagtcacaagcatgtcttatctggactactacggtagtcttctt--actgctcctcctgcttccacttcagtgccactacaa--tcttccttctacagtgatggggacaatcatcctaaaacgcaaatcagatggtactacttccctacttaaaactatcctcatgatttaccataatacttgaaagaaaattctaatttcttctctgacttacaaagcccc-ggaagtctgtctttgtttctgatctaagtcattccact--ctcttgcacgt---accacacatcaactacc-tggcattctttctgtttct---atgtttggaccttgcacaagctgccccatctacctcaaataccc-tt--ctgtgctcgtccattcaaatttcaac-ttaaatgtcacctcttcaaacaggctctacctgacaactcaatctaaaggtgtctacctagccaatctccagcatatcactgttgttttaattctctgcacagcattatcCACAATGTGATGCTTTCC--------------------TTA-ATTTTTCATACATCTATTTTTGAATATATGTATGAGTGTTCATACATATTTTGTATTTAT---TTTTT---TTTTTCCTTCCCTCTATGCACTCCAGAGAATTTAAGTTTATAAGAACAGGGAGgccaagcatggtggtgcgtggctgt i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20766140 666 - 38779656 ccatctctaccttcagaactggtcaaagccaccaacatgtcttacctgggcaaccataatagccttctt--actagtgcccctatgtccacaccagcccccttacaatccattcttcacacaccaatggga-tagtcatcctaaaaggcaaatcagactgtaaaatcagactccttaaaa-tcttctaatcacttctcaaaacacttgaaagaaaatacaaatttcttccatgacttacaaagccct-agaaatctgcccttacttctgacctcaggcataccatt--ctctctcacacactactacacatcaaccactctagccttctttctacgttt---tcttcagggcctcgcatgagctgtcccttctgcctcaaatgctc--t--ctctgatcacctattcaaatttcaac-ttaaatgtcacctgttcaaacaggctctacctgataaccccatctaaa-gtcactaactgagcaatctcaggcacatc-ctgttattttaattctctgcacagcactat-cacaatgcaatgctttct----ttacttat--------tta-atttttcatatatctatttTTGAACGTAGGTGTGCATGTTGGtacatatttaatatgactttgcttgt---ttttcttctttatccacccacttcagagaattgaagtttataataacagtga------gcctgat------------- i otoGar3.GL873528 I 175 C 0 s canFam3.chr31 13841291 651 + 39895921 tcatctccattattagcactgatcaaagttgccatcatgtcttgcccaaactattccagtaaccttctc--actgagcagcctaattccactctggcaccactacaactcattcttcatacagcaactagagcaatcattctaaaacatacatcagattgtcccactactctccttaaaa-tcccccaatgccttttcatcacacttgggaaaaaggctaaattctttccgcaacttacaaagcgct-agggatttgcctatatttctgatctcaatcataccact--ttcttgcat-----accacacttcaaccactctggtcttctttctgttcctaagacacaagttgtttgctgaagttgttacatatgcctcaaatattcttt--ctctgcttatccatttagatttcaac-ttaaatgtcacc--ttcaaatcgg-tatacctggcaacccaggctata---gactgcctaatcaatctccaggacatcactgttattttaattctctacacagcactct-cattatatgatgctttct---------------------ta-tttacttattcaacaatttttcaatgtatgcatgcatgttggtacatatttagcatttatttatttg-----tttcccctccctctacttactccagagaatttaagtttatgagaaaagaga--------------------gcttgt i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3631411 644 - 6883506 ccatctctaccattag------tcaaagccatcatcgtgtcttgcctggactactacgatagtcttctt--accagtcc-cctgcttccactccagtctcaatacaatccatccttcatacagcaactggattggccatggtaaaatgtaaataaaatcatgctactcccctgcttaaaa-tcctccagtagtttctcatcatacttggaagaaaacccaaatgttttcaatgtcttaaaatgtcct-aggaatccacctatgtctctgattcagaccaaagcacttggccattcctta---accaagctttagcccctctgaccttcttcct-------------------------caagctcttccatctgttcagaatactc-tttcctctgcccatcta-tcaaatctcaat-ttaaatgtcacctgttcaagtagattgtatctgacaacccaatctgag-gtaactacctaatgactctctagcacatcact-ttactctatttctctacacactgccat-catgatgtaatgctttcc----ttatttatttagtcaatcatgtttttcatacattcatgtgtgaatgtaagtctgcatattagcatatgtttagcatttaattgtttgtttattttctcctccccccagtcattccagggaagttcagatcataagaaccggga-------------------------- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1112078 859 + 2694913 I e micMur3.chr31 19214558 1981 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=161943.000000 s hg38.chr21_KI270874v1_alt 109872 15 + 166743 aatcctagcaactca s panTro5.chr21 3735506 15 + 33445071 aatcctagcaactca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361321 15 + 46275980 aatcctagcaactca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300721 15 - 13858734 aatcctagcaactca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483846 15 + 32716333 aatcccagcaactca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155438662 15 - 185818997 aatcccagcaactca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162262962 15 - 192294377 aatcccagcaactca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8743955 15 + 9440265 aatcccagcaactca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473466 15 + 21915920 aatcccagcaactca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048247 15 - 90373283 aatcccagcaactca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2231979 15 + 4234846 aatcccagcaactca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231417 15 - 13750039 aatcccagcaactca i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21947515 15 + 50472720 aatcccagcaactca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5049311 15 + 13128814 aatcccagcaactca i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626124 15 - 14377064 catcccagcaactca i cebCap1.NW_016107322v1 C 0 I 341 s aotNan1.NW_018487195v1 8764061 15 + 9889416 aatcccagcaactcA i aotNan1.NW_018487195v1 C 0 I 382 e proCoq1.NW_012144079v1 1112078 859 + 2694913 I e dasNov3.JH568778 3632055 0 - 6883506 C e micMur3.chr31 19214558 1981 + 47401472 I e otoGar3.GL873528 20766806 0 - 38779656 C e canFam3.chr31 13841942 0 + 39895921 C e mm10.chr16 78136405 103 + 98207768 I a score=96773.000000 s hg38.chr21_KI270874v1_alt 109887 15 + 166743 ggaggctgaggcatg s panTro5.chr21 3735521 15 + 33445071 ggaggctgaggcatg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361336 15 + 46275980 ggaggctgaggcatg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300736 15 - 13858734 ggaggctgaggcatg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483861 15 + 32716333 ggaggctgaggcatg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155438677 15 - 185818997 ggaggctgaggcatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162262977 15 - 192294377 ggaggctgaggcatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8743970 15 + 9440265 ggaggctgaggcatg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473481 15 + 21915920 ggaggctgaggcatg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048262 15 - 90373283 ggaggctgaggcatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2231994 15 + 4234846 ggaggctgaggcatg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231432 15 - 13750039 gaaggctgaggcatg i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3632055 5 - 6883506 ----------gcatg i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1112078 859 + 2694913 I e micMur3.chr31 19214558 1981 + 47401472 I e otoGar3.GL873528 20766806 0 - 38779656 C e aotNan1.NW_018487195v1 8764076 382 + 9889416 I e cebCap1.NW_016107322v1 9626139 341 - 14377064 I e saiBol1.JH378168 5049326 0 + 13128814 C e calJac3.chr21 21947530 0 + 50472720 C e canFam3.chr31 13841942 0 + 39895921 C e mm10.chr16 78136405 103 + 98207768 I a score=709465.000000 s hg38.chr21_KI270874v1_alt 109902 114 + 166743 agaatcgctggaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggcagtggcagcaagacaccatctcaaaa--ataaataaataaaataag s panTro5.chr21 3735536 114 + 33445071 agaatcgctggaacctgggaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggcagtggcagcaagacaccatctcataa--ataaataaataaaataag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361351 114 + 46275980 agaatcgctggaacctgggaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggcagtggcagcaagacaccatctcataa--ataaataaataaaataag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300751 114 - 13858734 agaatcgctggaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggcagtggcagcaagacaccatctcaaaa--ataaataaataaaataag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483876 114 + 32716333 agaatcgctggaacccgggaggcagaggttgcagtgagccgagactgtgccactgcactccagcctgggcagtggcagcaagacactatctcaaaa--ataaataaataaaataag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155438692 116 - 185818997 agaataactggcacttgggaggcagaggttgcagtgagtcaagattgtgccactgcactccagtctgggcagtggcagcaagactccatctcaaaaaaataaataaataaaataag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162262992 116 - 192294377 agaataactggcacttgggaggcagaggttgcagtgagtcaagattgtgccactgcactccagtctgggcagtggcagcaagactccatctcaaaaaaataaataaataaaataag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8743985 116 + 9440265 agaataactggcacttgggaggcagaggttgcagtgagtcaagattgtgccactgcactccagtctgggcagtggcagcaagactccatctcaaaaaaataaataaataaaataag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473496 116 + 21915920 agaatcactggcacttgggaggcagaggttgcagtgagccaagattgtgccactgcactccagtctgggcagtggcagcaagactccatcccaaaaaaataaataaaTAATATAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048277 115 - 90373283 agaatcactggcacttggga-gcagaggttgcagtgagccaagattgtgccactgcactccagtctgggcagtggcagcaagactccatcccaaaaaCATAAATAAATAATATAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232009 116 + 4234846 agaatcactggcacttgggaggcagaggttgcagtgagccaagattgtgccactgcactccagtctgggcagtggcagcaagactccatcccaaaaaaataaataaataaaataag i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231447 115 - 13750039 agaatcactggcatttgggaggcagaggttgcagtgagctgagattgtgccactgcactccagtctgggcagtggcagcaagattccatctcaaaaa-ataaataaataaaataag i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21947530 91 + 50472720 ----------------------Tggaagctgcagtgagccaagattgttctactgcactccagcctcgacagtggcagcaagactccatctcaaaa--aaaaattaa-aaaataag i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5049326 89 + 13128814 ----------------------aggaagttgcagtgagccgagattgttctactgcactccagcctcgacagtggcagtaagactccatctcaaaa--aaaa--taa-aaaataag i saiBol1.JH378168 C 0 C 0 s otoGar3.GL873528 20766806 6 - 38779656 ------------------------------------------gattgt-------------------------------------------------------------------- i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1112078 859 + 2694913 I e dasNov3.JH568778 3632060 0 - 6883506 C e micMur3.chr31 19214558 1981 + 47401472 I e aotNan1.NW_018487195v1 8764076 382 + 9889416 I e cebCap1.NW_016107322v1 9626139 341 - 14377064 I e canFam3.chr31 13841942 0 + 39895921 C e mm10.chr16 78136405 103 + 98207768 I a score=44760.000000 s hg38.chr21_KI270874v1_alt 110016 4 + 166743 aaGT s panTro5.chr21 3735650 4 + 33445071 aaGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361465 4 + 46275980 aaGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300865 4 - 13858734 aaGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483990 4 + 32716333 aaGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155438808 4 - 185818997 aagt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263108 4 - 192294377 aaGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744101 4 + 9440265 aaGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473612 4 + 21915920 AAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048392 4 - 90373283 AAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232125 4 + 4234846 aaGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231562 4 - 13750039 aaGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21947621 4 + 50472720 aaGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5049415 4 + 13128814 aaGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626480 4 - 14377064 AAGT i cebCap1.NW_016107322v1 I 341 C 0 s aotNan1.NW_018487195v1 8764458 4 + 9889416 AAGT i aotNan1.NW_018487195v1 I 382 C 0 e proCoq1.NW_012144079v1 1112078 859 + 2694913 I e dasNov3.JH568778 3632060 0 - 6883506 C e micMur3.chr31 19214558 1981 + 47401472 I e otoGar3.GL873528 20766812 0 - 38779656 C e canFam3.chr31 13841942 0 + 39895921 C e mm10.chr16 78136405 103 + 98207768 I a score=11504.000000 s hg38.chr21_KI270874v1_alt 110020 1 + 166743 C s panTro5.chr21 3735654 1 + 33445071 C i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361469 1 + 46275980 C i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300869 1 - 13858734 C i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483994 1 + 32716333 C i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155438812 1 - 185818997 c i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263112 1 - 192294377 C i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744105 1 + 9440265 C i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473616 1 + 21915920 C i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048396 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232129 1 + 4234846 C i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231566 1 - 13750039 C i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21947625 1 + 50472720 T i calJac3.chr21 C 0 I 296 s saiBol1.JH378168 5049419 1 + 13128814 C i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626484 1 - 14377064 C i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764462 1 + 9889416 C i aotNan1.NW_018487195v1 C 0 C 0 s dasNov3.JH568778 3632060 1 - 6883506 c i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1112078 859 + 2694913 I e micMur3.chr31 19214558 1981 + 47401472 I e otoGar3.GL873528 20766812 0 - 38779656 C e canFam3.chr31 13841942 0 + 39895921 C e mm10.chr16 78136405 103 + 98207768 I a score=12637.000000 s hg38.chr21_KI270874v1_alt 110021 1 + 166743 c s panTro5.chr21 3735655 1 + 33445071 c i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361470 1 + 46275980 c i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300870 1 - 13858734 c i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483995 1 + 32716333 c i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155438813 1 - 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263113 1 - 192294377 c i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744106 1 + 9440265 c i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473617 1 + 21915920 c i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048397 1 - 90373283 c i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232130 1 + 4234846 c i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231567 1 - 13750039 c i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21947922 1 + 50472720 c i calJac3.chr21 I 296 C 0 s saiBol1.JH378168 5049420 1 + 13128814 C i saiBol1.JH378168 C 0 I 296 s cebCap1.NW_016107322v1 9626485 1 - 14377064 c i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764463 1 + 9889416 c i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1112937 1 + 2694913 c i proCoq1.NW_012144079v1 I 859 C 0 s canFam3.chr31 13841942 1 + 39895921 c i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3632061 1 - 6883506 t i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19214558 1981 + 47401472 I e otoGar3.GL873528 20766812 0 - 38779656 C e mm10.chr16 78136405 103 + 98207768 I a score=920825.000000 s hg38.chr21_KI270874v1_alt 110022 67 + 166743 tgttccattcacgagtgtatccccagatccaataacaatgcctgactcataattggcacttaatCAC s panTro5.chr21 3735656 67 + 33445071 tgttccattcaccagtgtatccccagctccaataacaatgcctgactcataattggcacttaatCAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361471 67 + 46275980 tgttccattcaccagtgtatccccagctccaataacaatgcctgactcataattggcacttaatCAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300871 67 - 13858734 tattccattcaccagtgtatccccagctccaataacaatgcctgactcataattggcacttaatCAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4483996 67 + 32716333 tgttccattcatgagtgtatccccagctccaataaaaatgcctggctcataattggcacttaatcac i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155438814 67 - 185818997 tgttccattcaccaatgtatccccagctccaataacaatgcctggctcatgactggcacttaatCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263114 67 - 192294377 tgttccattcaccagtgtatccccagctccaataacaatgcctggctcatgactggcacttaatCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744107 67 + 9440265 tgttccattcaccagtgtatccccagctccaataacaatgcctggctcatgactggcacttaatCAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473618 67 + 21915920 tgttccattcaccagtgtatccccagctccaataacaatgcctgactcatgactggcacttaatCAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048398 67 - 90373283 tgttccattcaccagtgtatccccagccccagtaacaatgcctggctcatgactggcacttaatCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232131 67 + 4234846 tgttccattcaccagtgtatccccagctccaataacaatgcctggctcatgactggcacttaatCAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231568 67 - 13750039 tgttccattcaccagtgtatccccagctccaataacaatgcctggctcatgattggcacttaatCAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21947923 67 + 50472720 tgttccattcaccggtgtatccccagctccaataacaatgcctggctcataattggcacttaataaT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5049717 67 + 13128814 tgttccattcacctgtgtatccctagctccaataacaatgcctggctcataattggcacttaataaC i saiBol1.JH378168 I 296 C 0 s cebCap1.NW_016107322v1 9626486 67 - 14377064 tgttccattcaccagtgtatccgcagctctaataacaatggctggctcatacttggcacttaataaC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764464 67 + 9889416 tgttccattcaccagtgcatccccagctccaataacaatgcctggctcataattggcacttaataac i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1112938 67 + 2694913 tgttctgttcaccagtgtatccccacttccaataacaatgcctggcacataacaggcacttaatcaa i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20766812 61 - 38779656 ------cttcgtcagtgtaaacccatctgtaataatgatgcctcacacataacaggtacttaatcaa i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13841943 56 + 39895921 tattctattca-----------ccagctccaataacaatgcctagcatgtaataggcacttagtcaa i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3632062 67 - 6883506 tgttctgttcaccactgcatccccagctcctatgacaatgcctaccatacaatagatacttactcaa i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19214558 1981 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=2820738.000000 s hg38.chr21_KI270874v1_alt 110089 195 + 166743 TGAATTTTTAATTC-----TAATAATGTAACCTGTGGGCATTTTTCCATGCACTAT--GGTTCCAAGTATGCACAAAGAGTAAATTTCCA-GCTTCCTTAACTCATGCATTAAGTGCCTACTAGTTGTGATGCCTGAAGAACTGGGAATAAAATCGGTGTGGGATGAATATCAGATGA-CCTAGAAGAAAATTTGAATTCACAT s panTro5.chr21 3735723 195 + 33445071 TGAATTTTTAATTC-----TAATAATGTAACCTGTGGGCATTTTTCCATGCACTAT--GGTTCCAAGTATGCACAAAGAGTAAATTTCCA-GCTTCCTTAACTCATGCAGTAAGTGCCTACTAGTTGTGATGCCTGAAGAACTGGGAGTAAAATGGGTGTGGGATGAATATCAGATGA-CCTAGAAGAAAATTTGAATTCACAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361538 195 + 46275980 TGAATTTTTAATTC-----TAATAATGTAACCTGTGGGCATTTTTCCACGCACTAT--GGTTCCAAGTATGCACAAAGAGTAAATTTCCA-GCTTCCTTAACTCATGCAGTAAGTGCCTACTAGTTGTGATGCCTGAAGAACTGGGAGTAAAATGGGTGTGGGATGAATATCAGATGA-CCTAGAAGAAAATTTGAATTCACAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3300938 195 - 13858734 TGAATTTTTAATTC-----TAATAATGTAACCTGTGGGCATTTTTCCATGCACTAT--GGTTCCAAGTATGCACAAAGAGTAAATTTCCA-GCTTCCTTAACTCATGCAGTAAGTGCCTACTAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAATATCAGATGA-CCTAGAAGAAAATTTGAATTCACAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484063 195 + 32716333 tgaatttttaaatC-----TAATAATGTGACCTGTGGGCATTTTTCCATGCACTAT--GGTTCCAAGTATGCACATAGGGTAAATTTCCA-GTTTCCTTAACTCATGCATTAAGTTCCTACTAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAATATCAGATGA-CCTAGAAGaaaatttaaattcacat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155438881 194 - 185818997 TGAATTTTTAATTC-----TAATAATGTAA-CTATGAGCATTTTTCCATGCACTGT--GGTTCCAAGTATGCACATAGACTAAATTTCCA-GTTTCCTTAACTCATGTTTTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGA-CCTAGAAGAAAATTTGAATTCACAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263181 194 - 192294377 TGAATTTTTAATTC-----TAATAATGTAA-CTATGAGCATTTTTCCATGCACTGT--GGTTCCAAGTATGCACATAGACTAAATTTCCA-GTTTCCTTAACTCATGTTTTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGA-CCTAGAAGAAAATTTGAATTCACAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744174 194 + 9440265 TGAATTTTTAATTC-----TAATAATGTAA-CTATGAGCATTTTTCCATGCACTGT--GGTTCCAAGTATGCACATAGACTAAATTTCCA-GTTTCCTTAACTCATGTTTTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGA-CCTAGAAGAAAATTTGAATTCACAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473685 195 + 21915920 TGAATTTTTAATTC-----TAATAATGTAA-CTATGAGCATTTTTCCATGCACTGT--GGTTCCAAGTGTGCACATAGACTAAATTTCCA-GTTTCCTTAACTCATGTTTTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGTGATGGATTGAACATCAGATGACCCTAGAAGAAAATTTGAATTCACAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048465 194 - 90373283 TGAATTTTTAATTC-----TAATAATGTAA-CTATGTGCATTTTTCCATGCACTGT--GGTTCCAAGTATGCACATAGACTAAATTTCCA-GTTTCCTTAACTCATGTATTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGA-CCTAGAAGAAAATTTGAATTCACAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232198 194 + 4234846 TGAATTTTTAATTC-----TAATAATGTAA-CTATGAGCATTTTTCCATGCACTGT--GGTTCCAAGTATGCACATAGACTAAATTTCCA-GTTTCCTTAACTCATGTTTTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGA-CCTAGAAAAAAATTTGAATTCACAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231635 194 - 13750039 TGAATTTTTAATTC-----TAATAATGTAA-CTATGAGCATTTTGCCATGCACTGT--GGTTCCAAGTATGCACACAGAGTGAATTTCCA-GTTTCCTTAACTCATGCATTAAGTTCCTACCAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAACATCAGATGA-CCTAGAAGAAAAATTGAATTCACAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21947990 195 + 50472720 TGAATTTTTAATTC-----TAATAATGTAACCTAAGAGCATTTTTTCATGCACTGT--CATTCCAAATATGCACATAGAGTAAATTTCCA-GTTTCCTTAACTCATGCATTAAGTTCCTACTAGTAGTGATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGATGAATATCAGATGT-CCTAGACAAAAATTCGAATTCACAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5049784 195 + 13128814 TGAATTTTTAATTC-----TAATAATGTAACCTAAGAGCATTTTTTCATGCACTGT--TGTTCCAAATATGCACATAGAGTAAATTTCCA-GTTTCCTTAACTCATGAATTAAGTTCCTACTAGTTGCAATGCCTGAAGAACTGGGAATAAAATGGGTGTGGGGTGAATATCAGATGT-CCTAGAAGGAAATTTGAATTCACAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626553 195 - 14377064 TGAACTTTTAATTC-----TAATAATGCAACCTAAGAGCACTTTTTCATGCACTGT--TGTTCCAAATATGCACATAGAGTAAATTTCTA-GTTTTCTTAACTCATGCATTAAGTTCCTACTAGTTGTGATGCCTGAAGAACTGGGAATAAAATGGATGTGGGATGAATAACAGATGT-CCTAGAAGGAAATTTGAATTCACAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764531 195 + 9889416 tgaatttttaattC-----TAATAATGTAACCTAAGAGCATTTTTTCATACACTGT--CATTCAAAATATGCACATAGAGTAAATTTCCA-GTTTCCTTAACTCATGCATTAAGTTCCCACTAGTTGTGATGCCTGAAGAACTGGAAATAAAATGGGTGTGGGATGAATATCAGATGT-CCTAGAAGAAAATTTGAATTCACAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19216539 190 + 47401472 tgaatgtttAATTC-----TGGTAATGTAACCCATGAACATTTTTCCATGCACTAT--GGTTCTAAGTAGGCACCTAGAGTAAATTTCCA-GA-----TAACTTATACATTAAGTTCCTCCTACTTCCACAGTTTGAGGAACTGGGAATAAAGTGGATATGGGATGAATATCAGATGA-GCTAGAAGAAAATTCAAGTTCACAT i micMur3.chr31 I 1981 I 362 s proCoq1.NW_012144079v1 1113005 190 + 2694913 tgaatgtttaatTC-----TAGTAATGTAACCTATGAGCATTTTTCCATGCACTAT--GGTTTCAAGTAGGCACCTAGAATAAATTTTCA-GA-----TAACTTATGCATTAACTTCCTCCTACTTCCACTGTTTGAAGAACTGGGAATAAAATAGGTATGGGATGAATATTAGATAA-GCTAGAAGAAAATTCGAGTTCACAT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20766873 186 - 38779656 tGAATTTCTAATTCTAGTATAGTATTGTAACCTATGAGCATTTTTCCCTCCACCAGTAGGCACTAAGTAGGCACTTAGAGTAAATTTTCA-GA-----TATCTTATGCATTA----------ACTGTCACTATCT-AAGAACTAGGCCTAAAATGGGTGTGGGATGAATATGACTTGA-GCTAGAAGAAAACTCAAGTTCACAT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13841999 195 + 39895921 tgaatatttAGTTC-----TGGTAATACAACCTATGAGCATTTTTCCATGCATTAT--GTTTTCAAATAGAGACATAGAGTAAATTTCCA-GTTTAACAAATTCACTCATTAAGTTTCTCCTAGTTCTGCTGTTTGAGGAATTAGGAACAAAATGGGTGTGAAATGAATATCAGATGA-CCTAAAAGAAAACTTGAGTTCACAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3632129 195 - 6883506 tTAGGGCTTAATTC-----TAAGATTATAACCTATAAGTATTTCTCTATGTATTAT--GGTTCCAAGTATGCACATAGAGTAAACCCACAGGTTTACGTAACACATTTATAAAGTTCCTACTAGTTTCATTGTTTGAGGAACTGGGAATAAAATGGGAGTGAGAAGTATATCAGATG--CGTGAAAGATAATTTGAGTTCACAT i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78136405 103 + 98207768 I a score=693818.000000 s hg38.chr21_KI270874v1_alt 110284 77 + 166743 TGAAAAGTGTGAAATT--AAAAAAAAAA---------------------------GAAAAACA-------CCTaatataaaacaaaattgaaatgttatatagggttcattct s panTro5.chr21 3735918 77 + 33445071 TGAAAAGTGTGAAATT--AAAAAAAAAA---------------------------GAAAAACA-------CCTaatataaaacaaaatttaaatgttatatagggttcattct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361733 76 + 46275980 TGAAAAGTGTGAAATT---AAAAAAAAA---------------------------GAAAAACA-------CCTaatagaaaacaaaatttaaatgttatatagggttcattct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301133 76 - 13858734 TGAAAAGTGTGAAATT---AAAAAAAAA---------------------------GAAAAACA-------CCTaatataaaacaaaatttaaatgttatatagggttcattct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484258 76 + 32716333 tgaaaagtgtgaaatt---aaaaaaaaa---------------------------gaaaaaCA-------CCTaatataaaacaaaatttaaatgttatatagggttcattct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439075 79 - 185818997 TGAAAAGAGTGAAATTTAAAAAAATAAA---------------------------GAAAAACA-------CCTAACATAAAACAAAATTGAAATGTTATATAGGGTTCCTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263375 79 - 192294377 TGAAAAGAGTGAAATTAaaaaaaataaa---------------------------gaaaaaca-------cctaatataaaacaaaattgaaatgttatatagggttccttct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744368 79 + 9440265 TGAAAAGAGTGAAATTAAAAAAAATAAA---------------------------GAAAAACA-------CCTAATATAAAACAAAATTGAAATGTTATATAGGGTTCCTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473880 74 + 21915920 TG-AAAGAGTGaaatt-aaaaaaataaa---------------------------gaaaca----------ctaatataaaacaaaatTGAAATGTTATATAGGGTTCCTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048659 78 - 90373283 TGAAAAGAGTGAAATT-TTAAAAATAAA---------------------------GAAAAACA-------CCTaatataaaacaaaattgaaatgttatatagggttccttct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232392 79 + 4234846 TGAAAAGAGTGAAATTAaaaaaaataaa---------------------------gaaaaaca-------cctaatataaaacaaaattgaaatgttatatagggttccttct i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231829 78 - 13750039 TGAAAAGAGTGAAATT-TTAAAAATAAA---------------------------GAAAAACA-------CCTAATATAAAACAAAATTGAAATGTTATATAGGGTTCCTTCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948185 70 + 50472720 TGAaaagcatgaaaga---------aaa---------------------------gaaaaaca-------tctaatataaaagaaaatttaaatgttagatagggtttatttt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5049979 70 + 13128814 TGAAAAGCACGAAAGA---------AGA---------------------------GAAAAACA-------CCTaatataaaagaaaatttaaatgttacatagggtttatttc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626748 70 - 14377064 TGAaaagcacaaaaga---------aaa---------------------------gaaaaaca-------cctaatataaaagaaaatttaaatgttatatagggtttatttt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764726 70 + 9889416 TGAAAAGCACGAAAGA---------AAA---------------------------GAAAAACA-------CCTAATATAAAAGAAAATTTAAATGTTACATAGGGTTTATTTT i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1113195 73 + 2694913 ATAAAAGCTTGACAGC-----AAAAAAG---------------------------AAAAATCA-------TCTaatat-gaaaaaaatttaaatgttatataggatcaattct i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20767059 99 - 38779656 ATAAAAGCTTGAAAGT-----AAAAAAAGATAGATTAAAAATGATTTAAATGATTAAAAATCA-------TTTAATAC--AAAAGTATTATAATGTTATATaggatcaattct i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13842194 90 + 39895921 CCAAGAACACAAAAGGTAAAAAAAAAAAAAAAGTTAAGA----------------AAAAGACA-------TTTAATAAGAAAGAAAATTTAggggtcctagctgggtcagttg i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3632324 82 - 6883506 CCAAGATTATGAAAAG-AAAAAAAAAAA---------------------------GATAAAGAGAAGATCTTTAATAAGAAAGGTGATTAAAA-GT--CATAGGGTTAAACCT i dasNov3.JH568778 C 0 I 11131 e micMur3.chr31 19216729 362 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=267464.000000 s hg38.chr21_KI270874v1_alt 110361 24 + 166743 ---gggcatccaacattc-atctaa-tgg s panTro5.chr21 3735995 24 + 33445071 ---gggcatccaacattc-atctaa-tgg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361809 24 + 46275980 ---gggcatccaacattc-atctaa-tgg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301209 24 - 13858734 ---gggcatccaacattc-atctaa-tgg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484334 24 + 32716333 ---aggcatccaacattc-atctaa-tgg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439154 24 - 185818997 ---GGGCAtccaacactc-atctag-tgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263454 24 - 192294377 ---gggcatccaacactc-atctag-tgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744447 24 + 9440265 ---GGGCATCCAACACTC-ATCTAG-TGg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473954 24 + 21915920 ---GGGCATCCAACACTC-ATCTAG-TGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048737 24 - 90373283 ---gggcatccaacattc-atctag-tgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232471 24 + 4234846 ---gggcatccaacactc-atctag-tgg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231907 24 - 13750039 ---AGGCAtccaacattc-acctag-tgg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948255 24 + 50472720 ---gggcatccaatattt-atttaa-tgg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050049 24 + 13128814 ---gggcatccaatattc-atttaa-tgg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626818 24 - 14377064 ---gggcatccaatattc-atttaa-tgg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764796 24 + 9889416 ---GGACATCCAATATTC-ATTTAA-TGG i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1113268 25 + 2694913 ---ggacatgcaatttcc-ttgtaattag i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20767158 25 - 38779656 ---ggacatccagcgtcc-atgtaattgg i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13842284 28 + 39895921 gtagagcatgtgacatttgatcttg-tag i canFam3.chr31 C 0 I 25 e dasNov3.JH568778 3632406 11131 - 6883506 I e micMur3.chr31 19216729 362 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=27529.000000 s hg38.chr21_KI270874v1_alt 110385 4 + 166743 aata s panTro5.chr21 3736019 4 + 33445071 aata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361833 4 + 46275980 aata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301233 4 - 13858734 aata i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484358 4 + 32716333 aata i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439178 4 - 185818997 aaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263478 4 - 192294377 aaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744471 4 + 9440265 aaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473978 4 + 21915920 AAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048761 4 - 90373283 aaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232495 4 + 4234846 aaaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231931 4 - 13750039 aaaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948279 4 + 50472720 aata i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050073 4 + 13128814 aata i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626842 4 - 14377064 aatg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764820 4 + 9889416 AATA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1113293 4 + 2694913 ggta i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20767183 4 - 38779656 ggtg i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3632406 11131 - 6883506 I e micMur3.chr31 19216729 362 + 47401472 I e canFam3.chr31 13842312 25 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=568863.000000 s hg38.chr21_KI270874v1_alt 110389 51 + 166743 atagaagaaggaacagagaagacaaaatgaaagaaaaacatc-------aaaaaaaaa- s panTro5.chr21 3736023 51 + 33445071 atagaagaaggaacagagaagacaaaatggaagaaaaacatc-------aaaaaaaaa- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361837 51 + 46275980 atagaagaaggaacagagaagacaaaatggaagaaaaacatc-------aaaaaaaaa- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301237 51 - 13858734 atagaagaaggaacagagaagacaaaatggaagaaaaatatc-------aaaaaaaaa- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484362 51 + 32716333 atagaagaaggaacagagaagacaaaatggaagaaaaacatc-------aaaaaaaaa- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439182 51 - 185818997 atagaagaaggaacagagaagacaaaatggaagaaaaacacg-------aaaaaaaaa- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263482 51 - 192294377 atagaagaaggaacagagaagacaaaatggaagaaaaacacg-------aaaaaaaaa- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744475 55 + 9440265 atagaagaaggaacagagaagacaaaatggaagaaaaacacg---aaaaaaaaaaaaa- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8473982 55 + 21915920 ATAGAAGAAGGAACAGAGAAG-CAAAATGGaagaaaaacatg--aaaaaaaaaaaaaa- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048765 54 - 90373283 atagaagaaggaacagagaagacaaaatggaagaaaaacatg----aaaaaaaaaaaa- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232499 58 + 4234846 atagaagaaggaacagagaagacaaaatggaagaaaaacacgaaaaaaaaaaaaaaaa- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231935 57 - 13750039 atagaagaaggaacagagaagacaaaatggaagaaaaacatc-aaaaaaaaaaaaaaa- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948283 46 + 50472720 atagaagaaggaacagagaagacaaagtggaaaaaaaacac------------ataaa- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050077 46 + 13128814 atagaagaaggaacagagaagacaaagtggaagaaaaacat------------aaaaa- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626846 51 - 14377064 atagaagaaggaacagagaagacaaagtggaagaaaaacatt-------aaaaaaaaa- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764824 51 + 9889416 ATAGAAGAAGGAACAGAGAAGACAAAGTGGaaaaaaaaatca-------aaaaaaaga- i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1113297 51 + 2694913 ataaaagagagaacagagaaaacaaaatggaagaaaaacatc-------aaagaaaca- i proCoq1.NW_012144079v1 C 0 I 165 s otoGar3.GL873528 20767187 49 - 38779656 atagaggagagaacatagaagagaaaatggaagaaaaacatc-------aaagaag--- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13842337 52 + 39895921 atagagaaagaaagaaagaaagaaagaaagaaagaaagaaag-------aaagaaagaa i canFam3.chr31 I 25 C 0 e dasNov3.JH568778 3632406 11131 - 6883506 I e micMur3.chr31 19216729 362 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=51895.000000 s hg38.chr21_KI270874v1_alt 110440 21 + 166743 -aaaaaaaaaaacacagaaaaa------ s panTro5.chr21 3736074 15 + 33445071 -aaaaa------cacagaaaaa------ i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361888 12 + 46275980 -aa---------cacagagaaa------ i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301288 10 - 13858734 ------------cacagaaaaa------ i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484413 12 + 32716333 -ca---------cacagaaaaa------ i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439233 14 - 185818997 -aaaa-------aacagaaaaa------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263533 14 - 192294377 -aaaa-------cacagaaaaa------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744530 14 + 9440265 -aaaa-------cacagaaaaa------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474037 14 + 21915920 -aaac-------cacagaaaaa------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048819 14 - 90373283 -acca-------cacagaaaaa------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232557 14 + 4234846 -aaca-------cacagaaaaa------ i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 231992 14 - 13750039 -aaaa-------cacagaaaaa------ i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948329 11 + 50472720 -aa----------aaagaaaaa------ i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050123 12 + 13128814 -aa---------gaaaaaaaaa------ i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626897 12 - 14377064 -aa---------gaaagaaaaa------ i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764875 12 + 9889416 -aa---------aacagaaaaa------ i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20767236 10 - 38779656 ------------cacagaataa------ i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13842389 21 + 39895921 agaaa-------gaaagaaagaaaggaa i canFam3.chr31 C 0 I 246 e proCoq1.NW_012144079v1 1113348 165 + 2694913 I e dasNov3.JH568778 3632406 11131 - 6883506 I e micMur3.chr31 19216729 362 + 47401472 I e mm10.chr16 78136405 103 + 98207768 I a score=1062835.000000 s hg38.chr21_KI270874v1_alt 110461 113 + 166743 ttctttgaaagctaaggaaaaa--ca--agtctccaaaatgaaaagtgcctattaagtcctaagcaggcagaattaaGCTAAG----AAAA---AAAAAA------GT------ACATGTATTTTCATGAAGGCTC s panTro5.chr21 3736089 114 + 33445071 ttctttgaaagctaaggaaaaa--ca--agtctccaaaatgaaaagtgcctattaagtcctaagcaggcagaattaaGCTAAG----AAAA---AAAAAAA-----GT------ACATGTATTTTCATTAAGGCTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17361900 114 + 46275980 ttctttgaaagctaaggaaaaa--ca--agtctccaaaatgaaaagtgcctattaagtcctaagcaggcagaattaaGCTAAG----AAAA---AAAAAAA-----GT------GCATGTATTTTCATTAAGGCTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301298 114 - 13858734 ttatttgaaagttaaggaaaaa--ca--agtctccaaaatgaaaagtgcctattaagtcctaagcaggcagaattaaGCTAAG----AAAA---AAAAAAA-----GC------ACATGTATTTTCATGAAGGCTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484425 113 + 32716333 ttctttgaaagctaaggaaaaa--ca--agtctccaaaatgagaagtgcctattaagtcctaagcaggcagaattaaGCTAAG----AAAA---AAAAAA------GT------ACATGTATTTTCATTAAGGCTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439247 114 - 185818997 ttctttgaaagctaaagaaaaa--caagagtctccaaaatgaaaagtgcctattcagtcctaagcagTCACAATTAAGCTAAG----AAAA---AAAAA-------GT------ACATGTATTTTCATTAAGGCTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263547 114 - 192294377 ttctttgaaagctaaagaaaaa--caagagtctccaaaatgaaaagtgcctattcagtcctaagcagTCACAATTAAGCTAAG----AAAA---AAAAA-------GT------ACATGTATTTTCATTAAGGCTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744544 114 + 9440265 TTCTTTGAAAGCTAAAGAAAAA--CAAGAGTCTCCAAAATGAAAAGTGCCTATTCAGTCCTAAGCAGTCACAATTAAGCTAAG----AAAA---AAAAA-------GT------ACATGTATTTTCATTAAGGCTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474051 114 + 21915920 -TCTTTGAAAGCTAAAGAAAAAAGCAAGAGTCTCC-AAATGAAAAGTGCCTATTCAGTCCTAAGCAGTCACAATTAAGCTAGA----AAAA---AAAAG-------TT------ACATGTATTTTCATTAAGGCTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048833 113 - 90373283 ttctttgaaagctaaagaaaaa--caagagtctccaaaatgaaaagtgcctattccgtcctaagcagTCAGAATTAAGCTAAG-----AAA---AAAAA-------GT------ACATGTGTTTTCATTAAGGCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232571 114 + 4234846 ttctttgaaagctaaagaaaaa--caagagtctccaaaatgaaaagtgcctattcagtcctaagcagTCACAATTAAGCTAAG----AAAA---AAAAA-------GT------ACACGTATTTTCATTAAGGCTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232006 117 - 13750039 ttctttgaaagctaaagaaaaa--caagagtctccaaaatgaaaagtgcctattcagtcctaagcagTCAGAATTAAGCTAAGAAAAAAAA---AAAAA-------GT------AC-TGTATTTTCATTAAGGCTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948340 117 + 50472720 ttctttgaaaactaaggaaaaa--caagagtctgcaaactgaaaagtccctattaagtcctaagtaggcagaattaaactaag----aaaaatgaaaaa-------gg------acatgtattttcattaaggctc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050135 123 + 13128814 ttatttgaaagctaaggaaaaa--caagagtctccaaactgaaaagtccctattaagtcctaagtaggcagaattaaGCTAAG----AAAAATGAAAAA-------GAAAAAGCACATGTATTTTCATTAAGGCTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9626909 117 - 14377064 ttctttgaaagctaaggaaaaa--caagagtctccaaactgaaaagtccctattaagttctaagtaggcagaattaaGCTAAG----AAAAATGAAAAA-------GT------ACATGTATTTTCATTAAGGCTC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8764887 123 + 9889416 TTCTTTGAAAGCTAAGGAAAAA--CAAGAGTCTCCAAACTGAAAAGTCCCTATTAAGTCCTAAGTAGGCAGAATTAAGCTAAG----AAAAATGAAAAA-------GAAAAAGTACATGCATTTTCATTAAGGCTC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20767246 120 - 38779656 ct-tctgaaagctgaagagagt--taagagtctgcaaacccgaagaagcacactgaatcttaagcaggcaaaccaaagaaaaa----agaa---gaaaaagcaaactt------acacatattttaattaaaattc i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1113348 165 + 2694913 I e dasNov3.JH568778 3632406 11131 - 6883506 I e micMur3.chr31 19216729 362 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=280766.000000 s hg38.chr21_KI270874v1_alt 110574 25 + 166743 AGATAAATAGGAGATTGTAAACATA s panTro5.chr21 3736203 25 + 33445071 AGATAAATAGGAGATTGTAAACATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362014 25 + 46275980 AGATAAATAGGAGATTGTAAACATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301412 25 - 13858734 AGATAAATAGGAGATTGTAAACATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484538 25 + 32716333 AGATAAATAGAAGATTGTAAACATt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439361 25 - 185818997 AGATAAATAGAATATTGTAAACATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263661 25 - 192294377 AGATAAATAGAATATTGTAAACATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744658 25 + 9440265 AGATAAATAGAATATTGTAAACATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474165 25 + 21915920 AGATAAATAGAATATTGTAAACATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048946 25 - 90373283 AGATAAATAGAATATTGTAAACATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232685 25 + 4234846 AGATAAATAGAATATTGTAAACATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232123 25 - 13750039 AGATAAATAGAAGATTGTAAACATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948457 25 + 50472720 agataaatagaagattgtaaaTGTt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050258 25 + 13128814 AGATAAATAGAAGATTGTAAATGTt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627026 25 - 14377064 AGATAAACAGAAGATTGTAAATATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765010 25 + 9889416 AGATAAATAGAAGATTGTAAATGTT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20767366 25 - 38779656 agataaatagaagaccttaaaCCTA i otoGar3.GL873528 C 0 I 1 s dasNov3.JH568778 3643537 25 - 6883506 AAATAAATAAAAGATCCTAATCTTA i dasNov3.JH568778 I 11131 C 0 e proCoq1.NW_012144079v1 1113348 165 + 2694913 I e micMur3.chr31 19216729 362 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=11745.000000 s hg38.chr21_KI270874v1_alt 110599 3 + 166743 -CCT s panTro5.chr21 3736228 3 + 33445071 -CCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362039 3 + 46275980 -CCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301437 3 - 13858734 -CCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484563 3 + 32716333 -cct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439386 3 - 185818997 -CTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263686 3 - 192294377 -CTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744683 3 + 9440265 -CTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474190 3 + 21915920 -CTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15048971 3 - 90373283 -CTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2232710 3 + 4234846 -CTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232148 3 - 13750039 -CTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948482 3 + 50472720 -cct i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050283 3 + 13128814 -cct i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627051 3 - 14377064 -CCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765035 3 + 9889416 -CCT i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1113513 2 + 2694913 -ct- i proCoq1.NW_012144079v1 I 165 I 1 s otoGar3.GL873528 20767392 2 - 38779656 -CT- i otoGar3.GL873528 I 1 C 0 s dasNov3.JH568778 3643562 3 - 6883506 ACT- i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19216729 362 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=2683664.000000 s hg38.chr21_KI270874v1_alt 110602 204 + 166743 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTAGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGTGGTCCAAAAAATTCTA------GAACAACACGGGAGCTCAG----TAAAAAGGAGACCCAATATTATGGCTATGAAATAGACTTGAAACCAACGGATACCAATTAGAAAAGCAAATAGGAGAACTCCAGAAAAAAA s panTro5.chr21 3736231 204 + 33445071 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTAGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGTGGTCCAAAAAATTCTA------GAACAACACGGGAGCTCAG----TAAAAAGGAGACCCAATATTATGGCTATGAAATAGACTTGAAACCAATGGATACCAATTAGAAAAGCAAATAGGAGAACTCCAGAAAAAAA i panTro5.chr21 C 0 I 1 s panPan2.chr21 17362042 204 + 46275980 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTAGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGTGGTCCAAAAAATTCTA------GAACAACACGGGAGCTCAG----TAAAAAGGAGACCCAATATTATGGCTATGAAATAGACTTGAAACCAATGGATACCAATTAGAAAAGCAAATAGGAGAACTCCAGAAAAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301440 204 - 13858734 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTAGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGTGGTCCAAAAAATTCTA------GAACAACACAGGAGCTCAG----TAAAAAGGAGACCCAATATTATGGCTATGAAATAGACTTGAAACTAAAGGATACCAATTAGAAAAGCAAATAGGAGAACTCCAGGAAAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484566 204 + 32716333 --acacactcttcctaaaaattacttgaggatccactctagcaaaataaataagaaaatatcaaaaaataaaa----------cacaagtggtccaaaaaattgta------gaacaacacaggagctcag----taaaaaggagacccaatattatggctataaaatagacttgaaaccaatggataccaattagaaaagcaaataggagaactccagaaaaaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439389 201 - 185818997 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGGGGTCCAAAAAATTGCC------GAACAACATAGGAGCTCAA----TAAAAAGGAGACCCAATATTATGGCTATGAAGTAGACTTGAAACCAATGGATACCGATTAGAAGAGCAAGT---AGAACTCCAGAAAAAAA i rheMac8.chr3 C 0 I 3 s macFas5.chr3 162263689 201 - 192294377 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGGGGTCCAAAAAATTGCC------GAACAACATAGGAGCTCAA----TAAAAAGGAGACCCAATATTATGGCTATGAAGTAGACTTGAAACCAATGGATACCGATTAGAAGAGCAAGT---AGAACTCCAGAAAAAAT i macFas5.chr3 C 0 I 3 s macNem1.NW_012019910v1 8744686 201 + 9440265 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGGGGTCCAAAAAATTGCC------GAACAACATAGGAGCTCAA----TAAAAAGGAGACCCAATATTATGGCTATGAAGTAGACTTGAAACCAATGGATACCGATTAGAAGAGCAAGT---AGAACTCCAGAAAAAAT i macNem1.NW_012019910v1 C 0 I 3 s cerAty1.NW_012002954v1 8474193 200 + 21915920 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGGGGTCCAAAAAATTGCC------AAACAACATAGGAGCTCAA----TAAAAAGGAGACCCAATATTATGGCTATGAAGTAGACTTGAAACCAATGGATACCGATTAGAAGAGCAAGT---AGAACTCCAGAAAAAA- i cerAty1.NW_012002954v1 C 0 I 3 s chlSab2.chr2 15048974 201 - 90373283 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAGAAAGTAAAA----------GACAAGGGGTCCAAAAACTTGCA------GAACAACATAGGAGCTCAA----TAAAAAGGAGATCCAATATTATGTCTATGAAGTAGACTTGAAACCAATGGATACCAATTAGAAGAGCAAGT---AGAACTCCAGAAAAAAA i chlSab2.chr2 C 0 I 4 s manLeu1.NW_012102865v1 2232713 201 + 4234846 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGGCAAAATAAATAAGAAAATATCAAAAAGTAAAA----------GACAAGGGGTCCAAAAAATTGCC------GAACAACATAGGAGCTCAA----TAAAAAGGAGACCCAATATTATGGCTATGAAGTAGACTTGAAACCAATGGATACCGATTAGAAGAGCAAGT---AGAACTCCAGAAAAAAA i manLeu1.NW_012102865v1 C 0 I 479 s colAng1.NW_012120598v1 232151 201 - 13750039 --ACACACTCTTCCTAAAAATTACTTGAGGATCCACTCTGACAAAATAAATAAGAAAATATTAAAAAGTAAAA----------GACAAGTGGCCCAAAAAATTGCA------GAACAACATAGGAACTCAA----TAAAAAGGAGACCCAATATTATGACTACGAAGTAGACTTGAAACCAATGGATACCGATTAGAAGAGCAAGT---AGAACTCCAGAAAAAAA i colAng1.NW_012120598v1 C 0 I 8 s calJac3.chr21 21948485 204 + 50472720 --acacactcttcccgaaaattactttaggatccactctagcaaactaaataagaaaatatcaaaaagtgaaa----------gataaggggtccaaaaaacggca------gaacaacataggagctaag----taaaaaggagacccagtattctggCTATGAAATAGATTTGAAACCAATGGATAGCGATTAGAAGAGCAAGTAAGAGAACTCCAGAAAAAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050286 203 + 13128814 --acacactcttcctgaaaattac-ttaggatccactctagcaaaataaataagaaaatatcaaaaagtgaaa----------ggcaaggggtccaaaaaagggca------gaacaacataggagctaag----taaaaaggagacccaatattctggCTATGAAATACACTTGAAACTAACGGATACCGATTAGAAGAGCAAGTGAGAGAACTCCAGAAAAAAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627054 204 - 14377064 --ACACACTCTTCCTGAAAATTACTTTAGCATCCACTCTAGCAAAATAAATAAGAAAATATCAAAAAGTGAAA----------GACAAGAGGTCCAAAAATGGGCA------GAACAGCATAGGAGCTAAG----TAAAAAGGAGACCCAGTATTCTGGCTATGAAATAGATTTGAAACCAATGGATACCGATTAGAAGAACAAGTAGGAGAACTCCAGAAAAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765038 204 + 9889416 --ACACACTCTTCCTGAAAATTACTTTAGGATCCACTCTAGCAAAATAAACAAGAAAATATCAAAAAGTGAAA----------GACAAGGGGTCCAAAAAATGGCA------GAACAACATAGGAGCTAAG----TAAAAAGGAGACCCAATATTCTGGCTATAAAACAGATTTGAAACCAATGGATACCGATTAGAAGAGCAAGTAGGAGAACTCCAGGAAAAAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19217091 202 + 47401472 --ACACACTCTTCCTGAAAATTACATGAGGATCCACTCTAGCAAAATAAATAAGAAAATATCAAAAAGAAAAA----------GATGTGTGGTCCAAAAAATGATG------GAACCAAATAGGAAATCAG----TAAAAAGGAGACCCAATGTTACAGCTATGAAACAAACTTAAAACCAATGGATACAAATTAGAGAAA-AAGTAGGAGAACTGTATGAAAAA- i micMur3.chr31 I 362 C 0 s proCoq1.NW_012144079v1 1113516 201 + 2694913 --acgcactcttcctgaaaattacttgaggatccactctagcaaaataaataagaaaatatcaaaaagaagaa----------gacgtctgctctaaaaaatgatg------gaacaacataggagCTCAG----TAAAAAGGAGACACAATATCATGGCTATTAAACAAACTTGAAACCAATGGACAGAAATTAGAG-AG-AAGTAGGAGAACTCTACAAAAAA- i proCoq1.NW_012144079v1 I 1 C 0 s otoGar3.GL873528 20767394 195 - 38779656 --------TTTTCCTGAACATCATTTGAGGATTCACTCTAGAAAAATAAATAAGACAATGTCGAGGAGAAATA-----------ACATGTGATCCAAAAAATGAGG------GAACATCATGGGAGCTCGG----GAAAAAGGAGACCCAATATCATGGCTATAAAATGAACTTAAAACCAATGGACGCAAATTAGCAACA-AAGTAGGAGAACTCTAAGAAAAA- i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3643565 219 - 6883506 ACTTATACACTTCCTAAAAATTACTTGAAGATTAAATCCAGCAAATTGAATACAAATATGTTAAAAAAAAAAAAAAAGATAAAGACAAGGGGTCCAAATAACAGACTAATGTAAACAACATAGGAACTTAGGTGTTGAAGA------CCATGATTATGATTATGCAACAAGTTTGAAAACAATGGGTATAGATTATAAGAGAATGTAGGAGGACTCCATCAAAAA- i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=933956.000000 s hg38.chr21_KI270874v1_alt 110806 68 + 166743 TGTCTTTAGGACAAAGAATGAAACAGAAATCATAACAGATTATATG-TCAAGA----ATCTAAAAGATCTTAA s panTro5.chr21 3736436 68 + 33445071 TGTCTTTAGGACAAAGAATGAAACAGAAATCATAATAGATTATATG-TCAAGA----ATCTAAAAGATCTTAA i panTro5.chr21 I 1 C 0 s panPan2.chr21 17362246 68 + 46275980 TGTCTTTAGGACAAAGAATGAAACAGAAATCATAATAGATTATATG-TCAAGA----ATCTAAAAGATCTTAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301644 68 - 13858734 TGTCTTTAGGACAAAGAATGAAACAGAAATCATAATAGATTATATG-TCAAGA----ATCTAAAAGATCTTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484770 68 + 32716333 tgtctttaggacaaagaatgaaacagaAATCATAATAGATTATATG-TCAAGA----ATCTAAAAGATCTTAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439593 68 - 185818997 TGTCTTTAAGACAAAGAATGAAACAGAAATCGTAATAGATTTTATG-TCAAGA----ATCTAAAAGATCTTAA i rheMac8.chr3 I 3 C 0 s macFas5.chr3 162263893 68 - 192294377 TGTCTTTAAGACAAAGAATGAAACAGAAATCGTAATAGATTTTATG-TCAAGA----ATCTAAAAGATCTTAA i macFas5.chr3 I 3 C 0 s macNem1.NW_012019910v1 8744890 68 + 9440265 TGTCTTTAAGACAAAGAATGAAACAGAAATCGTAATAGATTTTATG-TCAAGA----ATCTAAAAGATCTTAA i macNem1.NW_012019910v1 I 3 C 0 s cerAty1.NW_012002954v1 8474396 68 + 21915920 TGTCTTTAAGACAAAGAATGAAACAGAAATTGTAATTGATTTTATG-TCAAGA----ATCTAAAAGATCTTAA i cerAty1.NW_012002954v1 I 3 C 0 s chlSab2.chr2 15049179 68 - 90373283 TGTCTTTAAGACAAAGAATGAAACAGAAATCATAATAGATTTTATG-TCAAGA----ATCTAAAAGATCTTAA i chlSab2.chr2 I 4 C 0 s manLeu1.NW_012102865v1 2233393 68 + 4234846 TGTCTTTAAGACAAAGAATGAAACAGAAATCGTAATAGATTTTATG-TCAAGA----ATCTAAAAGATCTTAA i manLeu1.NW_012102865v1 I 479 C 0 s colAng1.NW_012120598v1 232360 68 - 13750039 TGTCTTTAGGACAAAGAATGAAACAGAAATCATAATAGATGTTATG-TCAAGA----ATCTAAAAGATCTTAA i colAng1.NW_012120598v1 I 8 C 0 s calJac3.chr21 21948689 66 + 50472720 -GTCTTTAGGACAAAGAATAAAACAG-AATTATAATAGATTATATG-TCAATA----ATCTAAAAGATCTTAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050489 67 + 13128814 -GTCTTTAGGACAAAGAATAAAACAGAAATTATAATAGATTATATG-TCAATA----ATCTAAAAGATCTTAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627258 67 - 14377064 -GCCTTTAGGACAAAGAATAGAACAGAAATTATAATAGATTATATG-TCAATA----ATCTAAAAGATCTTAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765242 67 + 9889416 -GTCTTTAGGACAAAGAATAAAACAGAAATTATAATAGATTATATG-TCAATA----ATCTAAAAGATCTTAA i aotNan1.NW_018487195v1 C 0 I 38 s micMur3.chr31 19217293 69 + 47401472 TGTCTTTAGGACAAAGACTGAAATGGGAATAATAATAGATTATATGACTAATA----ATCGAAAAGATCTTAA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1113717 69 + 2694913 TGTCTTTAGGACAAAGATTGAAATGGGAATCATAATAGATTATATGATTAATA----ATCTAAAAGATCTTAA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20767589 73 - 38779656 TGTCTTTAGGACAAAGGATGAAATGGGGATCACAATGGATTATATGATTAATAATGTATTGATAAAATCCTAA i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3643784 64 - 6883506 TGTC---AAGAC-AAGAATGAAATGGGAATCATAACAGATTGAGTGATTAATA----ATCTA-AATATCTTAA i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=26475.000000 s hg38.chr21_KI270874v1_alt 110874 3 + 166743 TTA s panTro5.chr21 3736504 3 + 33445071 TTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362314 3 + 46275980 TTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301712 3 - 13858734 TTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484838 3 + 32716333 TTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439661 3 - 185818997 TTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263961 3 - 192294377 TTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744958 3 + 9440265 TTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474464 3 + 21915920 TTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049247 3 - 90373283 TTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233461 3 + 4234846 TTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232428 3 - 13750039 TTA i colAng1.NW_012120598v1 C 0 C 0 s micMur3.chr31 19217362 3 + 47401472 TTA i micMur3.chr31 C 0 I 199 s proCoq1.NW_012144079v1 1113786 3 + 2694913 TTA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20767662 3 - 38779656 TTT i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3643848 3 - 6883506 TGA i dasNov3.JH568778 C 0 C 0 e aotNan1.NW_018487195v1 8765309 38 + 9889416 I e cebCap1.NW_016107322v1 9627325 0 - 14377064 C e saiBol1.JH378168 5050556 0 + 13128814 C e calJac3.chr21 21948755 0 + 50472720 C e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=424720.000000 s hg38.chr21_KI270874v1_alt 110877 39 + 166743 AGTGATAAGTAAAACAACGTAGAAGTCAATTAGAAACtc s panTro5.chr21 3736507 39 + 33445071 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362317 39 + 46275980 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301715 39 - 13858734 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484841 39 + 32716333 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439664 39 - 185818997 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162263964 39 - 192294377 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8744961 39 + 9440265 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474467 39 + 21915920 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAGCtc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049250 39 - 90373283 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233464 39 + 4234846 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232431 39 - 13750039 AGTGATAAGTAAAACAATGTAGAAGTCAATTAGAAACtc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948755 35 + 50472720 -CTGATAAATAAAACAATGTAGAA---AATTAGAAACTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050556 35 + 13128814 -CTGATAAATAAAACAATGTAGAA---AATTAGAAACTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627325 35 - 14377064 -CTGATAAATAAAACAATGTAGAA---AATTAGAAACTC i cebCap1.NW_016107322v1 C 0 C 0 s proCoq1.NW_012144079v1 1113789 39 + 2694913 TATGGTAAGGAAAACAATATAGAAGTCAATTTGAAATTC i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20767665 39 - 38779656 TGCAGTAAAGAAGACAATGTAGAAATCAATTGAAAATTC i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3643851 39 - 6883506 TATAATGATAAAGATAATGTAGAAGGCAATTAGAAATTC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19217365 199 + 47401472 I e aotNan1.NW_018487195v1 8765309 38 + 9889416 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=25976.000000 s hg38.chr21_KI270874v1_alt 110916 2 + 166743 ca s panTro5.chr21 3736546 2 + 33445071 ca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362356 2 + 46275980 ca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301754 2 - 13858734 ca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484880 2 + 32716333 ca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439703 2 - 185818997 ca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264003 2 - 192294377 ca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745000 2 + 9440265 ca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474506 2 + 21915920 ca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049289 2 - 90373283 ca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233503 2 + 4234846 ca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232470 2 - 13750039 ca i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948790 2 + 50472720 CA i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5050591 2 + 13128814 CA i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9627360 2 - 14377064 CA i cebCap1.NW_016107322v1 C 0 I 1 s proCoq1.NW_012144079v1 1113828 2 + 2694913 CA i proCoq1.NW_012144079v1 C 0 I 12 s dasNov3.JH568778 3643890 2 - 6883506 CA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19217365 199 + 47401472 I e otoGar3.GL873528 20767704 0 - 38779656 C e aotNan1.NW_018487195v1 8765309 38 + 9889416 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=573133.000000 s hg38.chr21_KI270874v1_alt 110918 100 + 166743 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagat s panTro5.chr21 3736548 100 + 33445071 gttttagctttctgcatatggctagccagttttcccaacgccatttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362358 100 + 46275980 gttttagttttctgcatatggctagccagttttcccaacgccatttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301756 100 - 13858734 gttttagttttctgcatatggctaggcagttttcccaacgccatttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484882 100 + 32716333 gttttagttttctgcatatggctagccagttttcccaacgccatttattaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439705 100 - 185818997 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcccattgcttgtttttgtcagatttgtcaaagat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264005 100 - 192294377 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcccattgcttgtttttgtcagatttgtcaaagat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745002 100 + 9440265 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcccattgcttgtttttgtcagatttgtcaaagat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474508 100 + 21915920 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcccattgcttgtttttgtcagatttgtcaaagat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049291 100 - 90373283 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcctattgcttgtttttgtcagatttgtcaaagat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233505 100 + 4234846 gttttagttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcccattgcttgtttttgccagatttgtcaaagat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232472 100 - 13750039 gttttcgttttctgcatatggctagccagttttcccaacaccatttattaaatagggaatccttttcccattgcttgtttttgtcagatttgtcaaagat i colAng1.NW_012120598v1 C 0 C 0 s dasNov3.JH568778 3643892 7 - 6883506 ---------------------------------------------------------------------------------------------CAAAAAT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1113830 12 + 2694913 I e micMur3.chr31 19217365 199 + 47401472 I e otoGar3.GL873528 20767704 0 - 38779656 C e aotNan1.NW_018487195v1 8765309 38 + 9889416 I e cebCap1.NW_016107322v1 9627362 1 - 14377064 I e saiBol1.JH378168 5050593 1 + 13128814 I e calJac3.chr21 21948792 1 + 50472720 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=572479.000000 s hg38.chr21_KI270874v1_alt 111018 124 + 166743 caggtggttgtagatgtgtggtgttatttctgagggctctgtcctgttccattggtctatatatctgttttggtaccagtaccatgctgttttggttccagtaccatgctgttttggttattgt s panTro5.chr21 3736648 102 + 33445071 caggtggttgtagatgtgtggtgttatttctgagggctctgtcctgttccattggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362458 102 + 46275980 caggtggttgtagatgtgtggtgttatttctgagggctctgtcctgttccattggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301856 124 - 13858734 caggtggttgtagatgtgtggtgttatttctgaggcctctgtcctgttccatttgtctatatatctgttttggtaccagtaccatgctgttttggttccagtaccatgctgttttggttattgt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4484982 102 + 32716333 cagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttccattggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439805 102 - 185818997 cagattgttgtagatgtgtggtgttatttctgaggcatctgttccgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264105 102 - 192294377 cagattgttgtagatgtgtggtgttatttctgaggcatctgttccgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745102 102 + 9440265 cagattgttgtagatgtgtggtgttatttctgaggcatctgttccgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474608 102 + 21915920 cagattgttgtagatgtgtggtgttatttctgaggcatctgttctgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049391 102 - 90373283 cagattgttgtagatgtgtggtgttatttctgaggcctctgttctgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------attgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233605 102 + 4234846 cagattgttgtagatgtgtggtgttatttctgaggcatctgttctgttccatcggtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------actgt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232572 102 - 13750039 cagattgttgtagatgtgtggtgttatttctgaggcctctgttctgttccatcagtctatatatctgttttggtaccagtaccatgctgttttggtt----------------------acttt i colAng1.NW_012120598v1 C 0 C 0 e proCoq1.NW_012144079v1 1113830 12 + 2694913 I e dasNov3.JH568778 3643899 0 - 6883506 C e micMur3.chr31 19217365 199 + 47401472 I e otoGar3.GL873528 20767704 0 - 38779656 C e aotNan1.NW_018487195v1 8765309 38 + 9889416 I e cebCap1.NW_016107322v1 9627362 1 - 14377064 I e saiBol1.JH378168 5050593 1 + 13128814 I e calJac3.chr21 21948792 1 + 50472720 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=7098.000000 s hg38.chr21_KI270874v1_alt 111142 1 + 166743 a s panTro5.chr21 3736750 1 + 33445071 a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362560 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301980 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485084 1 + 32716333 a i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439907 1 - 185818997 a i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264207 1 - 192294377 a i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745204 1 + 9440265 a i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474710 1 + 21915920 a i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049493 1 - 90373283 a i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233707 1 + 4234846 a i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232674 1 - 13750039 a i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20767704 1 - 38779656 A i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1113830 12 + 2694913 I e dasNov3.JH568778 3643899 0 - 6883506 C e micMur3.chr31 19217365 199 + 47401472 I e aotNan1.NW_018487195v1 8765309 38 + 9889416 I e cebCap1.NW_016107322v1 9627362 1 - 14377064 I e saiBol1.JH378168 5050593 1 + 13128814 I e calJac3.chr21 21948792 1 + 50472720 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=241035.000000 s hg38.chr21_KI270874v1_alt 111143 49 + 166743 gaattgtagtatagtttgtagccaggtagcatgatgcctccagctttgt s panTro5.chr21 3736751 49 + 33445071 gaattgtagtatagtttgaagccatgtagcatgatgcctccagctttgt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362561 49 + 46275980 gaattgtagtatagtttgaagccaggtagcatgatgcctccagctttgt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3301981 49 - 13858734 gaattgtagtacagtttgaagccaggtagcatgatgcctccagctttgt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485085 49 + 32716333 gacttgtagtatagtttgaagccaggtagcatgatgcctccagctttgt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439908 49 - 185818997 gacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264208 49 - 192294377 gacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745205 49 + 9440265 gacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474711 49 + 21915920 gacttgtaggatagtttgaagccaggtagcatgatggctccagttttgt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049494 49 - 90373283 gacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233708 49 + 4234846 gacttgtaggatagtttgaagccaggtagcatgatggctccagctttgt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232675 49 - 13750039 gacttgtaggatagtttgaagtcaggtagcatgatgcctccagctttgt i colAng1.NW_012120598v1 C 0 C 0 s otoGar3.GL873528 20767705 3 - 38779656 GAA---------------------------------------------- i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3643899 8 - 6883506 AAATTATA----------------------------------------- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1113830 12 + 2694913 I e micMur3.chr31 19217365 199 + 47401472 I e aotNan1.NW_018487195v1 8765309 38 + 9889416 I e cebCap1.NW_016107322v1 9627362 1 - 14377064 I e saiBol1.JH378168 5050593 1 + 13128814 I e calJac3.chr21 21948792 1 + 50472720 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=128951.000000 s hg38.chr21_KI270874v1_alt 111192 12 + 166743 AGAATG----CTATAC s panTro5.chr21 3736800 12 + 33445071 AGAATG----CTATAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362610 12 + 46275980 AGAATG----CTATAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302030 12 - 13858734 AGAATG----CTATAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485134 16 + 32716333 AGAATGCTCCCTATAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439957 12 - 185818997 AGAATG----CTATAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264257 12 - 192294377 AGAATG----CTATAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745254 12 + 9440265 AGAATG----CTATAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474760 12 + 21915920 AGAATG----CTATAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049543 12 - 90373283 AGAATG----CTATAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233757 12 + 4234846 AGAATG----CTATAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232724 12 - 13750039 AGAATG----CTATAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948793 12 + 50472720 AGAATG----CTATAC i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5050594 12 + 13128814 AGAATG----CTGTAC i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9627363 12 - 14377064 AGAATG----CTGTAC i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8765347 12 + 9889416 AGAATG----CTGTAC i aotNan1.NW_018487195v1 I 38 C 0 s otoGar3.GL873528 20767708 10 - 38779656 --AAAG----CTATAG i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1113830 12 + 2694913 I e dasNov3.JH568778 3643907 0 - 6883506 C e micMur3.chr31 19217365 199 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=1756687.000000 s hg38.chr21_KI270874v1_alt 111204 151 + 166743 AAGTAATTCATGGTTCAAATATAAAATAAACTAAAATTAAGCATCATTTTGAG-AAAATGATAGaaagacaatccatttaatcttgata--tttgaaacaatctatataaaggaggattatttcaatgacttagaattatatttattagctgta s panTro5.chr21 3736812 151 + 33445071 AAGTAATTCATGGTTCAAATATTAAATAAACTAAAATTAAGCATTATTTTGAG-AAAATGATAGaaagacaatccatttaatcttgata--tttgaaacaatctatataaaggaggattatatcaatgacttagaattatatttattagctgta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362622 151 + 46275980 AAGTAATTCATGGTTCAAATATAAAATAAACTAAAATTAAGCATTATTTTGAG-AAAATGATAGaaagacaatccatttaatcttgata--tttgaaacaatctatataaaggaggattatatcaatgacttagaattatatttattagctgta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302042 151 - 13858734 AAGTAATTCATGGTTCAAATATAAAATAAACTAAAATTAAGCATCATTTTGAG-AAAATGATAGAAAGACAATCCATTTAATCTTGATA--TGTGAAACAATCTATATAAAGGAGGATTATTTCAATGACTTAGAATTATATTTATTAGCTGTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485150 151 + 32716333 AAGTAATTCATGGTTCAAATATAAAATAAACTAAAATTAAGCATCATTTTGAG-AAAATTATAGAAAGGCAATCCATTTAATCTTGATA--TTTGAAACAATCTATAAAAAGGAGGATTATTTCAGTGACTTAGAATTATATTTATTAGCTGTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155439969 151 - 185818997 AAGTAATTCATGGTTCATATATAAAATAAACTAAAATTAAGCATCATCTTAAG-AAAATGATAGGaagataatccgtttaatcttgata--tttgaaacaatctatataaaggaggattatttcagtgacatagaagtatatttattagctgta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264269 151 - 192294377 AAGTAATTCATGGTTCATATATAAAATAAACTAAAATTAAGCATCATCTTAAG-AAAATGATAGGaagataatccatttaatcttgata--tttgaaacaatctatataaaggaggattatttcagtgacatagaattatatttattagctgta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745266 151 + 9440265 AAGTAATTCATGGTTCATATATAAAATAAACTAAAATTAAGCATCATCTTAAG-AAAATGATAGGaagataatccatttaatcttgata--tttgaaacaatctatataaaggaggattatttcagtgacatagaattacatttattagctgta i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474772 151 + 21915920 AAGTAATTCATGGTTCATATATAAAATAAACTAAAAGTAAGCATCATCTTAAG-AAAATGATAGGaagataatccatttaatcttgata--tttgaaacaatctatataaaggaggattatttcagtgacatagaattatatttattagctgta i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049555 151 - 90373283 AAGTAATTCATGGTTCATATATAAAATAAACTAAAATTAAGCATCATCTTAAG-AAAATGATAGGaagataatccatttaatcttgata--tttgaaacaatctatataaaggaggattatttcagtgacatagaattatatttattagctata i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233769 151 + 4234846 AAGTAATTCATAGTTCATATATAAAATAAACTAAAATTAAGCATCATCTTAAG-AAAATGATAGGaagataatccatttaatcttgata--tttgaaacaatctatataaaggaggattatttcagtgacatagaattatatttattagctgta i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232736 151 - 13750039 AAGTAATTCATGGTTCGTATATAAAATAAACAAAAATTAAGCATCATCTTGAG-AAAATGATAGGaagataatccatttaatcttgaca--tttgaaaaaatctgtataaaggaggattatttcagtgacatagaattatatttattagctgta i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948805 149 + 50472720 AAGTAACTCATGGTCCAAATATAAACTAAACTAAAATTAAGCATCATTTTGAGAAAAATGAT-AAAAGGTAATCCATTTAATCTTGTCA--TTTGGAACAATCTATATAGAGGAGGATTA--TCAATGACAAAGAATTGTATTTATTGCCTGTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050606 150 + 13128814 AAGTAACTCATGGTCCAAATATAAAATAAACTAAAATTAAGCATCATTTTGAGaaaaatgataaaaagataatccatttaatcttgata--tttggaataatttatatagaggaggatta--tcaatgacaaagaattgtatttattgcctgta i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627375 151 - 14377064 AAGTAACTCATGGTCCAAATATAAAATAAACTAAAATTAAGCACCATTTTGAGaaaaatgataaaaagataatccatttaatcttgatatttttggaacaatctatatagaggaggatta--tcaatgacaaagaattatatttattgcct-ta i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765359 150 + 9889416 GAGTAACTCATGGTCCAAATATAAAATAAACTAAAATTAAGCATCATTTTGAGaaaaatgataaaaagataatccatttaatcttgata--tttggaacaatctatatagaggaggatta--tcaatgacaaagaattgtatttattgcctgta i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1113842 151 + 2694913 AAGTACTTCATGGTCCAAATATGAAATAAACTAAAATTAAGAATCATTTTGAG-CAAATGATGGaaagataatataattaatattgaca--tttgaaatattctacctagaggataacacttttaatgacctaagaccatatttattgaccata i proCoq1.NW_012144079v1 I 12 I 2 s otoGar3.GL873528 20767718 149 - 38779656 AAGTAACTCATGGTCC-AATAAGAAGTAAACTAAAATTAAGAATCATTTGGAA-CAAATGTTGGAAAGATAACATTATTAACACTAGca--tttggaatattctacctagtggagaac-ctttcagtgacataggacaatatttattgcctcta i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3643907 145 - 6883506 -----ACTCAAGGTCCTAGTATGAAGTAAACTAGAACAGAGTGTCATTTTAGA-CAAATGGTGGaaagaaagcccatttaatcttaata--ttt-ccacattctacttagtggagaacacttttagtggcatagacttacatttatttgatgtg i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19217365 199 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=1238178.000000 s hg38.chr21_KI270874v1_alt 111355 94 + 166743 aatccaattacact-acctgattttatagtaaataacacttacattttcaaagtattgcaaaactctttgctttcagtattcagaatcagtgt----ac s panTro5.chr21 3736963 94 + 33445071 gatccaattacact-acctgactttatagtaaataacacttacattttcaaagtattgcaaaactctttgctttcagtattcagaatcagtgt----ac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362773 94 + 46275980 gatccaattacact-acctgattttatagtaaataacacttacattttcaaagtattgcaaaactctttgctttcagtattcagaatcagtgt----ac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302193 94 - 13858734 AATCCAATTACACT-ACCTGATTTTATAGTAAATAACACTTACATTTTCAAAGTATTGCAAAACTCTTTGCTTTCAGTATTCAGAATCAGTGC----AC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485301 94 + 32716333 AATCCAATTACACT-ACCTGATTTTATAGTAAATAACACTTACATTTTCAAAGTATTGCAAAACTCTTCGCTTTCAGTATTCAGAATCAGTGT----AC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155440120 94 - 185818997 aatacagttacact-acctgattttatagtaaataacagttacattttcaaagtattacaaaactctttgctttcagtattcagaatcagtgt----ac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264420 94 - 192294377 aatccagttacact-acctgattttatagtaaataacagttacattttcaaagtattacaaaactctttgctttcagtattcagaatcagtgt----ac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745417 94 + 9440265 aatccagttacact-acctgattttatagtaaataacagttacattttcaaagtattacaaaactctttgctttcagtattcagaatcagtgt----ac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8474923 94 + 21915920 aatccagttacact-acctgattttatagtaaataacagttacattttcaaagtattacaaaactctttgctttcagtattcagaatgagtgt----ac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049706 94 - 90373283 aatccagttacact-acctgattttatagtaaataacatttacattttcaaagtattacaaaactctttgctttcagtattcagaatcagtgt----ac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2233920 94 + 4234846 aatccagttacact-acctgattttatagtaaataacagttacattttcaaagtattacaaaactctttgctttcagtattcagaatcagtgt----ac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232887 94 - 13750039 aatccaattacact-accggattttatagtaaataacatttaccttttcaaagtattacaaaactctttgctttcagtattcagaatcagtgt----ac i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21948954 91 + 50472720 AAGTCAATTACACC-ACCTGATTATATAGTAAAC---ATTTACATTTTCAAAGAATTACAAAACTCTTTGGTTTTGATATTCAGAGTCAGTGT----TC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050756 87 + 13128814 aagccaattacact-acctgattttatagtaaat---atttacattttcaaagaattacaaaactctttgctttcagtattcag----agtgt----ac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627526 91 - 14377064 aagccaattacact-acctgattttatagtaaat---atttacattttcaaagaattacaaaactctttgctttcaatattcagagttagtgt----aa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765509 91 + 9889416 aagccaattacact-acctgattttatagtaaat---atttacattttcaaagaattacaaaactctttgctttcagtattcagagtcagtgt----ac i aotNan1.NW_018487195v1 C 0 I 4 s micMur3.chr31 19217564 98 + 47401472 aagccaattacact-acctgattttatagtaaataacatttgcattttcgaagtattataaaactctttgcttccagcatttaaaatcaccatatagac i micMur3.chr31 I 199 C 0 s proCoq1.NW_012144079v1 1113995 90 + 2694913 aagccaattacacc-acctgattttatagtaaataacatttgcattttcaaagtattataaaactctttgcttctagcatttagaatca--------gt i proCoq1.NW_012144079v1 I 2 C 0 s otoGar3.GL873528 20767867 96 - 38779656 aagccaactacagtaacctgattttatagt-aataaca-tcacattttcaaaatattataaaactgtttgcttccaaaatttagaattgttataca-ga i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3644052 89 - 6883506 aagtcagttacact-atttgattctatagtaaataa-actcacatttttagagaatt---aagctcttc-ttcacaacatttagaatcagtgt----at i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136405 103 + 98207768 I a score=1185001.000000 s hg38.chr21_KI270874v1_alt 111449 84 + 166743 ----aaagtgcctaaaatgattatatttgcaca-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAG-A s panTro5.chr21 3737057 84 + 33445071 ----aaagtgcctaaaataattatatttgcaca-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAG-A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362867 84 + 46275980 ----aaagtgcctaaaataattatatttgcaca-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAG-A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302287 84 - 13858734 ----AAAGTGCCTAAAATAATTATATTTGCACA-ATAAAATGTAAACTTTATACTTTGAGAGTGAAGATGTAG----TTGACAGGAGTTTAG-A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485395 84 + 32716333 ----AAAATGCCTAAAATAATTATATTTGCACA-ATAAAATGTAAACTTTATACTTTGAGAGTGAAGATGTAG----TTGACAGGAGTTTAG-A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155440214 85 - 185818997 ----aaagtgcctaaaataattatatttgcata-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTCACAGGAGTTTAGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264514 85 - 192294377 ----aaagtgcctaaaataattatatttgcata-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745511 85 + 9440265 ----aaagtgcctaaaataattatatttgcata-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8475017 85 + 21915920 ----aaagtgcctaaaataattatatttgcata-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049800 85 - 90373283 ----aaagtgcctaaaataattatatttgcata-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2234014 85 + 4234846 ----aaagtgcctaaaataattatatttgcata-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 232981 85 - 13750039 ----aaagtgcctaaaataattatatttgcata-ataaaatgtaaactttatactttgagagtgAAGATGTAG----TTGACAGGAGTTTAGAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21949045 80 + 50472720 ----AAAGTGCCTAAAATAATTATATTTGCATA-ATACAATATAAACTTTATACTTCAAGAGTAAAGATGTAG----TTGAC---AGTTTAG-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050843 80 + 13128814 ----aaagtgcctaaaataattatatttgcata-atacaatgtaagctttatactttgaGAGTTAAGATGTAG----TTGAT---AGTTTAG-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627617 80 - 14377064 ----aaagtgcctaaaataattatacttgcata-atacaatgtaaactttatactttgagagtgAAGATGTAG----TTGAC---AGTTTAG-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765604 80 + 9889416 ----aaagtgcctaaaataattatatttgcata-atacaatgtaaactttatactttgagagtgAAGATGTAG----TTGAC---AGTTTAG-- i aotNan1.NW_018487195v1 I 4 C 0 s micMur3.chr31 19217662 85 + 47401472 ----aaagtacctgaaataattatatttgcatatatataatgcaatgtttatattttgacaatAAAGATGTAG----TTGACAGGAGGTTAGA- i micMur3.chr31 C 0 I 168 s proCoq1.NW_012144079v1 1114085 84 + 2694913 ----aaagtacctgaaataattatattggcata-atataatgcaaagtttatacttagacaatAAAGATGTAA----TTGACAGGAGGTTAGA- i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20767963 83 - 38779656 ----aaagtacctgaaataattatatttgcata-atataatgtaaagtttatactctgacaataaaggtatag----ttgataggaggttag-- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78136508 88 + 98207768 ----AAGGTACCTAAAGGAATGATGTGTGCATA-GTGTGGCTTCCTCTTTAGAATTTGACAGTAAAGTTGCAGGTACTTGGCAGCACTTTAGA- i mm10.chr16 I 103 I 1 s dasNov3.JH568778 3644141 85 - 6883506 agctagagtactcaaa---attatattttcata-atatgatgtaaatgttatactttgagagtaaagttgtag----ctgacagaagctagaa- i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I a score=492533.000000 s hg38.chr21_KI270874v1_alt 111533 49 + 166743 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT s panTro5.chr21 3737141 49 + 33445071 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17362951 49 + 46275980 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302371 49 - 13858734 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485479 49 + 32716333 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155440299 49 - 185818997 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162264599 49 - 192294377 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745596 49 + 9440265 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8475102 49 + 21915920 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15049885 49 - 90373283 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2234099 49 + 4234846 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 233066 49 - 13750039 AGTGGAGACTTGTGAGAAGCATGCCAAAAAGTATCAA-----TTTTCTCTTTCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21949125 28 + 50472720 ---------------------TGCCAGAAAGTATGCA-----TTTTTTCTTTCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050923 28 + 13128814 ---------------------TGCCAGAAAGTATGAA-----TTTTTTCTTTCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627697 28 - 14377064 ---------------------TGCCAGAAAGTATGAA-----TTTTTTCTTTCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765684 28 + 9889416 ---------------------TGCCAGAAAGTATGAA-----TTTTTTCTTTCT i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1114170 49 + 2694913 AGTGAAGGCTTGTGGGAATGGTGCTAGAAAGTATTAA-----TTTCTTCTTTCT i proCoq1.NW_012144079v1 I 1 C 0 s otoGar3.GL873528 20768046 47 - 38779656 --tgaaggaaggtgggaagcatgctgggaagtactaa-----tttcctctttct i otoGar3.GL873528 C 0 I 288 s mm10.chr16 78136597 43 + 98207768 AGTAAAGACTCATGGAAAAAGTG------AATAGTTC-----TTTTTAGTTTCC i mm10.chr16 I 1 C 0 s dasNov3.JH568778 3644226 54 - 6883506 agcgaagactggcagggagggtgcaagaaagtataagggtattcatttctttat i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19217747 168 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I a score=1119006.000000 s hg38.chr21_KI270874v1_alt 111582 103 + 166743 ----------------------------------AAATGA---AAAAAAGAACTAAAAATTTACA-TTTTGTATCTCGAGTTATAAATGCTACCAATAGAA-AAA-CA---AACATAATATATAATAGGTAAATTAAAGATTCTGA s panTro5.chr21 3737190 103 + 33445071 ----------------------------------AAATGA---AAAAAAGAACTAAAAATTTATA-TTTAGTATCTCGAGTTATAAATGCTACCAATAGAA-AAA-CA---AACATAATATATAATAGGTAAATTAAAGATTCTGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363000 103 + 46275980 ----------------------------------AAATGA---AAAAAAGAACTAAAAATTTATA-TTTAGTATCTCGAGTTATAAATGCTACCAATAGAA-AAA-CA---AACATAAtatataacaggtaaattaaagattctga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302420 103 - 13858734 ----------------------------------AAATGA---AAAAAAGAACTAAAAATTTATA-TTTAGTATCTCGAGTTATAAGTGCTACCAATAGAA-AAA-CA---AACATAATATATAATAGGTAAATTAAAGATTCTGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485528 103 + 32716333 ----------------------------------AAATGA---AAAAAAGAACTAAAAATTTATA-TTTAGTATCTCAAGTTATAAATGCTACCAATAGAA-AAA-TA---AACATAATATATAATAGGTAAATTAAAGATTCTGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155440348 103 - 185818997 ----------------------------------AAATG----AAAAAGGAACTAGAATTTTATATTTTAGTGTCTCAAGTTATAAATACTACCAATAGAA-AAA-GA---AACAAAAtatataataggtaaattaaagattctga i rheMac8.chr3 C 0 I 3 s macFas5.chr3 162264648 102 - 192294377 ----------------------------------AAATG----AAAAAGGAACTAGAATTTTATA-TTTAGTGTCTCAAGTTATAAATACTACCAATAGAA-AAA-GA---AACAAAAtatataataggtaaattaaagattctga i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745645 102 + 9440265 ----------------------------------AAATG----AAAAAGGAACTAGAATTTTATA-TTTAGTGTCTCAAGTTATAAATACTACCAATAGAA-AAA-GA---AACAAAAtatgtaataggtaaattaaagattctga i macNem1.NW_012019910v1 C 0 I 3 s cerAty1.NW_012002954v1 8475151 102 + 21915920 ----------------------------------AAATG----AAAAAAGAACTAGAATTTTATA-TTTAGTGTCTCAAGTTATAAATACTACCAATAGAA-AAA-GA---AAAAAAAtatataataggtaaattaaagattctga i cerAty1.NW_012002954v1 C 0 I 3 s chlSab2.chr2 15049934 102 - 90373283 ----------------------------------AAATG----AAAAAAGAACTAGAATTTTATA-TTTAGTGTCTCAAGTTATAAATGTTACCAATAGAA-AAA-GA---AACAAAATATATAATAGGTAAATTAAAGATTCTGA i chlSab2.chr2 C 0 I 3 s manLeu1.NW_012102865v1 2234148 102 + 4234846 ----------------------------------AAATG----AAAAAAGAACTAGAATTTTATA-TTTAGTGTCTCAAGTTATAAATACTACCAATAGAA-AAA-GA---AACAAAAtatataataggtaaattaaagattctga i manLeu1.NW_012102865v1 C 0 I 3 s colAng1.NW_012120598v1 233115 102 - 13750039 ----------------------------------AAATG----AAAAAAGAACTAGAATTTTATA-TTTAATATCTCAAGTTATAAATGCTACCAGTAGAA-AAA-GA---AACAAAATATATAATAGTTAAattaaagattctga i colAng1.NW_012120598v1 C 0 I 3 s calJac3.chr21 21949153 101 + 50472720 ----------------------------------ACAT-----AAAAAAGAACTAGAAATTTATA-TTTAGTATCTAGAGATATAAATGCTACCAATAGAA-AAA-CA---AACACAAtatataattggtaaattaaagattctga i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5050951 102 + 13128814 ----------------------------------ACATA----AAAAAAGAACTAGAAATTTATA-TTTAGTATCTAGAGATATAAATGCTACCAATAGAA-AAA-CA---AACACAATATATAATTGGTAAATTAAAGATTCTGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627725 101 - 14377064 ----------------------------------ACAT-----AAAAAAGAACTAGAAATTTATA-TTTAGCATCTGGAGATATAAATGCTACCAATAGAA-AAA-CA---AACACAAtatataattggtaaattaaagattctga i cebCap1.NW_016107322v1 C 0 I 3 s aotNan1.NW_018487195v1 8765712 100 + 9889416 ----------------------------------ACAT------TAAAAAAAGTAGAAATTTATA-TTTAGTATCTAGAGATATAAATGCTACCAATAGAA-AAA-CA---AACACAAtatataattggtaaattaaagattctga i aotNan1.NW_018487195v1 C 0 I 3 s proCoq1.NW_012144079v1 1114219 98 + 2694913 ------------------------------------ATGT---GGAAAATAACCAGAAATTTATA-TTTAGTATATAGAGTTATAAATGCTACCAGTAGAGAAAA-CA---AAC--AATACATAATTGGTAAACT--AGagtctga i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20768381 99 - 38779656 ----------------------------------aaaaaa---aaaaaaTAACCAGAAATTTACA-CTTAGTATATAGAATTATAAAGGCTACCA-TAGAACAAC-CA---AACATAATCCATAATCAGTAAACT----agtctga i otoGar3.GL873528 I 288 C 0 s mm10.chr16 78136640 92 + 98207768 ----------------------------------ACATG----AAAAAATATTATGACATTTACA-CTTAGTTCTGAAAGTTATAATTGGTACCAAAAAAA-AAA-AAATGAACGTGATACTCATTTGGTAAA------------- i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3644280 130 - 6883506 actacatagagaggattcagaagaaactatgtaaagatgatggaaaaaagatccagggatttgca-tttaatacttaaagttataaatattatcagtagaa-aagtca---agtataaTCTATAATTGgt---ttgaa-------- i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19217747 168 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I a score=-11799.000000 s hg38.chr21_KI270874v1_alt 111685 10 + 166743 TTCCTGTTTG s panTro5.chr21 3737293 10 + 33445071 TTCCTGTTTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363103 10 + 46275980 ttcctgtttg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302523 10 - 13858734 TTCCTGTTTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485631 10 + 32716333 TTCCTATTTG i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162264750 3 - 192294377 --act----- i macFas5.chr3 C 0 C 0 s calJac3.chr21 21949254 3 + 50472720 --act----- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051053 3 + 13128814 --ACT----- i saiBol1.JH378168 C 0 C 0 s proCoq1.NW_012144079v1 1114317 3 + 2694913 -----atc-- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20768480 3 - 38779656 -----atc-- i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3644410 7 - 6883506 ---ctacttg i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19217747 168 + 47401472 I e aotNan1.NW_018487195v1 8765812 3 + 9889416 I e cebCap1.NW_016107322v1 9627826 3 - 14377064 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78136732 0 + 98207768 C e colAng1.NW_012120598v1 233217 3 - 13750039 I e cerAty1.NW_012002954v1 8475253 3 + 21915920 I e macNem1.NW_012019910v1 8745747 3 + 9440265 I e manLeu1.NW_012102865v1 2234250 3 + 4234846 I e chlSab2.chr2 15050036 3 - 90373283 I e rheMac8.chr3 155440451 3 - 185818997 I a score=274347.000000 s hg38.chr21_KI270874v1_alt 111695 21 + 166743 ATCCAGAATcaaacaggaatg s panTro5.chr21 3737303 21 + 33445071 ATCCAGAATcaaacaggaatg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363113 21 + 46275980 atccagaatcaaacaggaatg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302533 21 - 13858734 ATCCAGAATCACACAGGAATG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485641 21 + 32716333 ATCCAGAATCAAACAGGAATG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155440454 21 - 185818997 acccagaatcaaacaggaatg i rheMac8.chr3 I 3 C 0 s macFas5.chr3 162264753 21 - 192294377 acccagaatcaaacaggaatg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8745750 21 + 9440265 acccagaatcaaacaggaatg i macNem1.NW_012019910v1 I 3 C 0 s cerAty1.NW_012002954v1 8475256 21 + 21915920 acccagaatcaaacaggaatg i cerAty1.NW_012002954v1 I 3 C 0 s chlSab2.chr2 15050039 21 - 90373283 ACCCAGAATCAAACAGGAATG i chlSab2.chr2 I 3 C 0 s manLeu1.NW_012102865v1 2234253 21 + 4234846 acccagaatcaaacaggaatg i manLeu1.NW_012102865v1 I 3 C 0 s colAng1.NW_012120598v1 233220 21 - 13750039 acccagaatcaaacaggaatg i colAng1.NW_012120598v1 I 3 C 0 s calJac3.chr21 21949257 21 + 50472720 acccagaatcaaataggaata i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051056 19 + 13128814 ACCCAGAATCAAACA--AATA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627829 21 - 14377064 acccagaatcaaacaggaata i cebCap1.NW_016107322v1 I 3 C 0 s aotNan1.NW_018487195v1 8765815 21 + 9889416 acccagaatcaaacaggaata i aotNan1.NW_018487195v1 I 3 C 0 s proCoq1.NW_012144079v1 1114320 21 + 2694913 agctagaatcaaacaagaatg i proCoq1.NW_012144079v1 C 0 I 5 s otoGar3.GL873528 20768483 21 - 38779656 atctagaatcaaacaagaatg i otoGar3.GL873528 C 0 I 5 s mm10.chr16 78136732 20 + 98207768 AGTTGGAGCTAGTCAGGAAC- i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3644417 16 - 6883506 -----gatacaaacaggaatg i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19217747 168 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I a score=2705843.000000 s hg38.chr21_KI270874v1_alt 111716 211 + 166743 -----attttcctctgaaagttgccttcagtcatactct--gaggtttctctttccttccattactaatatc--tgagcacatcctttggctctctggtcactttcacttaCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACGTAA-----------------------------------TTTTGT-AATAAAAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- s panTro5.chr21 3737324 211 + 33445071 -----attttcttctgaaagttgccttcagtcatactct--gaggtttctctttccttccattactaatatc--tgagcacatcctttggctctctggtcactttcatttaCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACATAA-----------------------------------TTTTGT-AATAACAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363134 211 + 46275980 -----attttcctctgaaagttgccttcagtcatactct--gaggtttctctttccttccattactaatatc--tgagcacatcctttggctctctggtcactttcatttaCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACATAA-----------------------------------TTTTGT-AATAACAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302554 211 - 13858734 -----attttcctctgaaagttgccttcagtcatactct--gaggtttctctttccttccattactaatatc--tgagcacatcctttggctctctggtcactttcacttaCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACGTAA-----------------------------------TTTTGT-AATAAAAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485662 211 + 32716333 -----ATTTTCGTCTGAAAGTtgccttcagtcatactct--gaggtgtctctttccttccattactaatatc--tgagcacatcctttgcctctctggtcactttcacttatAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACGTAA-----------------------------------TTTTGT-AATAACAGACTT--CTGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155440475 211 - 185818997 -----attttccttggaaagttgccttcagtcatactct--gaggtttctctttccttccgttactaatatc--tgagcacatcctttggctctctggtcactttcacttatAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTCT-AATAAAAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i rheMac8.chr3 C 0 I 317 s macFas5.chr3 162264774 211 - 192294377 -----attttccttggaaagttgccttcagtcatactct--gaggtttctctttccttccgttactaatatc--tgagcacatcctttggctctctggtcagtttcacttatAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTCT-AATAAAAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i macFas5.chr3 C 0 I 319 s macNem1.NW_012019910v1 8745771 211 + 9440265 -----attttccttggaaagttgccttcagtcatactct--gaggtttctctttccttccgttactaatacc--tgagcacatcctttggctctctggtcagtttcacttatAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTCT-AATAAAAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i macNem1.NW_012019910v1 C 0 I 321 s cerAty1.NW_012002954v1 8475277 211 + 21915920 -----attttccttggaaagttgccttcagtcatactct--gaggtttctctttccttccgttactaatatc--tgagcacatcctttggctctctggtcactttcacttatAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTGT-AATAAAAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAAAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr2 15050060 211 - 90373283 -----ATTTTCTTTGGAAAGTtgccttcagtcatactct--gaggtttctctttccttccgttactaatatc--tgagcacatcctttggctctctggtcactttcacttatAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTGT-AATAAAATACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012102865v1 2234274 212 + 4234846 -----attttccttggaaagttgccttcagtcatactct--gaggtttctctttccttccattactaatatc--tgagcacatcctttggctctctggtcactttcacttatAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACTTAA-----------------------------------TTTTGTAAAAAAAAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i manLeu1.NW_012102865v1 C 0 I 1 s colAng1.NW_012120598v1 233241 211 - 13750039 -----attttcctcggaaagttgccttcagtcatactct--gaggtttctctttccttccgttactaatatc--tgagcacatcctttgactctctggtcactttcacttatAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTGT-AATAACAGACTT--ATGTTGAAAAGATATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTTATCTCAA- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21949278 211 + 50472720 -----atttttctctgaaagttgccttcagtcatacttt--gagatttttctttcctcccattactaatatc--tgagcacatcctttggctctctggtcattttcacttaCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTGT-AATAACAGACTT--ATGTCGAAAAGGTATACTTCTGTCTAAATCAGAATTTCAAATTCGTATCCAATTCAAACATCTCCCTTTATTTCAA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051075 211 + 13128814 -----atttttctctgaaagttgccttcagtcatacttt--gagatttttcttttcttccattactagtatc--tgagcacatcctttggctctctggtcactttcacttaCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTGT-AATAACAGACTT--ATGTTGAAAAAGCATACTTTTGTCTATATCAGAATTTCAAATTCGTATCGAATTCAAACATCTCCCTTTATTTCAA- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9627850 211 - 14377064 -----atttttttctgaaagttgccttcagtcatacttt--gagatttttctttccttccattgctaatacc--tgagcacatcctttggctctctggtcactttcacttaCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACCTAA-----------------------------------TTTTGT-AATAACAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTCGTATCCAATTCAAACATCTCCCTTTATTTCAT- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8765836 210 + 9889416 -----atttttctctgaaagttgccttcagtcagacttt--gagatttctctttccttccattactaatat---tgagcacatcctctggctctctggtcactttcacttaCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAACATAA-----------------------------------TTTTGT-AATAACAGACTT--ATGTTGAAAAGGTATACTTTTGTCTAAATCAGAATTTCAAATTTGTATCCAATTCAAACATCTCCCTTCATTTCAA- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19217915 214 + 47401472 -----atttttctctgaaagctggcttcagtcatgctctgtgagatttccctccccttccattactaatatc--tgagcagatcccttagctctctggtcaatttcacttatgga----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aaCAAACCTAA----------------------------------TTTTTAT-AATAATGGactttcaagttgaaaaggtacaatttagtctaaatcaaaacttc-aactcacatccaattcaaa-atctcccttcatctcaa- i micMur3.chr31 I 168 C 0 s proCoq1.NW_012144079v1 1114346 205 + 2694913 -----atttttctctaaaagctggcttcaatcatgctctgtgatatttcccttccctcccattactaatatc--tgagcagatcccttagctctctggtcaatttcacttagaga----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aacaaacttaa----------------------------------tttttat-aataatggactctcaagttgaaaagg-------tagtcgaagtcaaaacttc-aactcacatccaattcaaa-atctccctccatctc--- i proCoq1.NW_012144079v1 I 5 C 0 s otoGar3.GL873528 20768509 213 - 38779656 -----gtttttctctaaaaactaccttcaatcatgctctg-ggggcctccctgcccttccatcactaatatc--taagcttgtcccttagctctctggtcagtttcacttataga----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aacaaatctaa----------------------------------tttTTGT-AATAATGGACTCACAAATTAAAAAGGTATATTTTGGTTTAAACCAAAACTTC-AACTCCCATCCAGTTCAAC-ATTTCCCTTCATCTCAA- i otoGar3.GL873528 I 5 C 0 s mm10.chr16 78136752 155 + 98207768 -----------------------CCATC------TCTGT--GAGAATCC-----CCTTATATTACTAATATCCTTTAGTGAATGC-TTAGCTCTCAGGTT-TTGTTTCTTTCAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGG----------------------------------------CTTTGC-AAT-------TT--------AAAAGATAAACTT--------GTCACCATACCAAATCAATATCCAATTCAAA-GTACCCCGTTGCCTTTA- i mm10.chr16 C 0 I 1 s dasNov3.JH568778 3644433 517 - 6883506 atatcatttgtctctaaaaatttccttcgaacattctgt--cag-----tgtttgcttccatgactaacatg--tggacagatcccttagttttctggtcactttcagttttaaaacaagtcTggacattatatatcctgccataatgcactgaatgtactagcagagagtgtaaactacaatgtaaactataatccatgcggtgcagcagtgctccaaaatgtattcaccaaatgcaatgaatgtgccataatgatgaaagaggttgttgatgtgggtggagtggggggtgggggattgggtatgtgagaacctcatattatttaatgtaatattTTTTGTGATCTATGTACCTTAAAAAAAGACaatttaattaaaaaaatagaaaacttaaaaatttttaaaaaaCACAAAAATAACAAGTCTGACTTTTAT-TATTAAGAACTTCCAAATTGGAAAGCTATAATAGGATCTAAATCAAAACTTCAAATTCATATCCAATTCAAAAATTTTATCTTCTCCTCAT i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I a score=9100.000000 s hg38.chr21_KI270874v1_alt 111927 1 + 166743 G s panTro5.chr21 3737535 1 + 33445071 G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363345 1 + 46275980 G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302765 1 - 13858734 G i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485873 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s colAng1.NW_012120598v1 233452 1 - 13750039 G i colAng1.NW_012120598v1 C 0 I 1 s calJac3.chr21 21949489 1 + 50472720 G i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051286 1 + 13128814 G i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628061 1 - 14377064 G i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766046 1 + 9889416 G i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19218129 1 + 47401472 g i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20768722 1 - 38779656 G i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78136908 1 + 98207768 G i mm10.chr16 I 1 C 0 s dasNov3.JH568778 3644950 1 - 6883506 G i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1114551 0 + 2694913 C e canFam3.chr31 13842410 246 + 39895921 I e cerAty1.NW_012002954v1 8475488 1 + 21915920 I e macNem1.NW_012019910v1 8745982 321 + 9440265 I e manLeu1.NW_012102865v1 2234486 1 + 4234846 I e chlSab2.chr2 15050271 1 - 90373283 I e macFas5.chr3 162264985 319 - 192294377 I e rheMac8.chr3 155440686 317 - 185818997 I a score=2493.000000 s hg38.chr21_KI270874v1_alt 111928 1 + 166743 C s panTro5.chr21 3737536 1 + 33445071 G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363346 1 + 46275980 G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302766 1 - 13858734 G i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485874 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s calJac3.chr21 21949490 1 + 50472720 G i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051287 1 + 13128814 G i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628062 1 - 14377064 G i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766047 1 + 9889416 G i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19218130 1 + 47401472 g i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20768723 1 - 38779656 G i otoGar3.GL873528 C 0 I 1 s mm10.chr16 78136909 1 + 98207768 A i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3644951 1 - 6883506 A i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1114551 0 + 2694913 C e canFam3.chr31 13842410 246 + 39895921 I e colAng1.NW_012120598v1 233453 1 - 13750039 I e cerAty1.NW_012002954v1 8475488 1 + 21915920 I e macNem1.NW_012019910v1 8745982 321 + 9440265 I e manLeu1.NW_012102865v1 2234486 1 + 4234846 I e chlSab2.chr2 15050271 1 - 90373283 I e macFas5.chr3 162264985 319 - 192294377 I e rheMac8.chr3 155440686 317 - 185818997 I a score=2661790.000000 s hg38.chr21_KI270874v1_alt 111929 190 + 166743 -CCCTTCTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAAC-TTgggggaggaat----ggg---gaagtataaattagataaatttaccatcttttataccatgaaatctattactactcttataaagttaacatatcaagaaatagaggtataagt s panTro5.chr21 3737537 190 + 33445071 -CCCTTCTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAaatgtaatcaacaaaac-ttgggggaggaat----ggg---gaagtataaattagataaatttaccgtcttttataccatgaaatcaattactactgttataaagttaacatatcaagaaatagaggtataagt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363347 190 + 46275980 -CCCTTCTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAaatgtaatcaacaaaac-ttgggggaggaat----ggg---gaagtataaattagataaatttaccatcttttataccatgaaatcaattactactgttataaagttaacatatcaagaaatagaggtataagt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302767 190 - 13858734 -CCCTTCTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAAC-TTgggggaggaat----ggg---gaagtataaattagataaatttaccatcttttataccatgaaatcaattactgctgttataaagttaacatatcaagaaatagaggtacaagt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4485875 190 + 32716333 -CCCTTTTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGTTTTCATT--CAACACCC----------TGTTACAAATGTAATCAACAAAAC-TTgggggaggaat----ggg---gaattataaactagataaatttatcatcttttataccatgaaatcaattaccactgttataaagttaacatatcaagaaatagaggtataagt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441003 190 - 185818997 -CCCTTCTTTAGCA-AGCTCTAAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAAC-TTgaaggaggaat----ggg---gaagtataaattagataaatgtatcatcttgtataccataaaatcaattactactgctataaagttaacatatcaagaaatagaggtataagt i rheMac8.chr3 I 317 C 0 s macFas5.chr3 162265304 190 - 192294377 -CCCTTCTTTAGCA-AGCTCTAAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAAC-TTgaaggaggaat----ggg---gaagtataaattagataaatgtatcatcttgtataccataaaatcaattactactgctataaagttaacatatcaagaaatagaggtataagt i macFas5.chr3 I 319 C 0 s macNem1.NW_012019910v1 8746303 190 + 9440265 -CCCTTCTTTAGCA-AGCTCTAAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAAC-TTgaaggaggaat----ggg---gaagtataaattagataaatgtatcatcttgtataccataaaatcaattactactgctataaagttaacatatcaagaaatagaggtataagt i macNem1.NW_012019910v1 I 321 C 0 s cerAty1.NW_012002954v1 8475489 190 + 21915920 -CCCTTCTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAAC-TTgaaggaggaat----ggg---gaagtataaattagataaatgtatcatcttgtataccaggaaatcaattactactgctataaagttaacatatcaagaaatagaggtataagt i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr2 15050272 190 - 90373283 -CCCTTCTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAAT-TTgaaggaggaat----ggg---gaagtgtaaattagataaatgtatcatcttgtataccatgaaatcaattactactgctataaagttaacatatcaagaaatagaggtataagt i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012102865v1 2234487 190 + 4234846 -CCCTTCTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAATGTAATCAACAAAAC-TTgaaggaggaat----ggg---gaagtataaattagagaaatgtatcatcttgtataccatgaaatcaattactactgctataaagttaacatatcaagaaatagaggtataaat i manLeu1.NW_012102865v1 I 1 C 0 s colAng1.NW_012120598v1 233454 190 - 13750039 -CCCTTCTTTAGCA-AGCTCTGAGCCTTGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCG----------TGTTACAAATGCAATCAACAAAAT-TTgaaagaggaat----ggg---gaagtataaattagataaatgtatcatcttgtataccatgaaatcaattactaccgctataaagttaacatatcaagaaatagaggtataaat i colAng1.NW_012120598v1 I 1 C 0 s calJac3.chr21 21949491 190 + 50472720 -CCCTTCTTTAACA-AGCTCTAAGCCTGTGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAAGTGTAATCAACAAAAC-TTGGGAGGAAAAT----Agg---gaagtataaattagataaatttctcctcttttatatcattaaatcaattactactattataaagttaacatatcaagaaatagaagtataagt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051288 190 + 13128814 -CCCTTCTTTAGCA-AGCTCTGAGCCTGGGGTC----------------AAAGGAGAAGCTTTCATT--AAACATCC----------TGTTACAaatgtaatcaacagaac-ttgggaggaaaat----ggg---gaaatataaattagataaatttctcatcttttatatcatgaaatcaattactactgttataaagttaacatatcaagaaatagaagaataagt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628063 190 - 14377064 -CCCTTCTTTAGCA-AGCTCTGAGCCTGGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAaacgtaatcaacaaaac-ttgggaggaaaat----ggg---gaagtataaattagataaatttctcatcttttttatcatgaagtcaattactactgttataaagttaacatatcaagaaatagaagtataaga i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766048 190 + 9889416 -CCCTTCTTTAGCA-AGCTCTGAGCCTGGGGTC----------------AAAGGAGAAGCTTTCATT--CAACATCC----------TGTTACAaatgtaatcaacaaaac-ttgagaggaaaat----ggg---gaagtataaattagataaatttctcatcttttatatcatgaaatcaattactactgttataaagttaacatatcaagaaatagaagtataagt i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19218131 192 + 47401472 -tctttccttggca-agctctgagcctggggTC----------------AAAGGAGAATCTCCCATT--CAATATCC----------TGTTACAAACATAATCAACAAAAC-TTGACAGGGAGAC----AGGTAAGAAGTATAAGTGAGATAAATTTCTCATCTTTTGTACCATGAAATCAATTGTTACTGCT-TAAAGTTAATATATCAATAAACATAGGTATAAGT i micMur3.chr31 C 0 I 335 s proCoq1.NW_012144079v1 1114551 187 + 2694913 ------ccttggca-agctctgagccttgggTT----------------GAAGGAGAAGCTTCCATT--CAACATCC----------TGTTACAaacacaatcaacaaaac-ttgggagggagac----aggtaaaaagcataagtgagataaatttctcatcttttataccataaaatcaattgttactgtt-taaagttaacatatcaataaagataggtaaaagt i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20768725 190 - 38779656 -TTTCTCCTTGGTG-AACTCTGAGCCTTCCATC----------------AAAGGAAAAGCTCCCGTT--CAACATCC----------TGTTACAAac--aatcaagaaaac-ttgggaaggggac----aggtaagaagtataagtgagacaaatttctcttctttcataccatgaaatcaattgtcatggct-taaagttattatgtcaataaagagaagtataaat i otoGar3.GL873528 I 1 C 0 s mm10.chr16 78136910 203 + 98207768 -ACTTTGTGTAGCA-GGCTCTAAACTT--AGTC----------------AACTGATGCATTTCCCTCAGCCGCATTCCATAATGGGGCATTTCAAATTCAATGACTAATTC-TTGGTGGTGGGTCGCTAGAA---AAAGAATGTGGGAGGTCAATGTGTAGTTCTCCATTCCTTGACATCATATGCCTCCATT-TATTGTTAATAGATCACGAAAGAAAAGCACATTG i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3644952 204 - 6883506 CTCTTCCTTAAGTACAACTCTGAATCTTGGGTCAACTCTAAGCCAGGTGAAGGCAGAGGCTTCCATT--CAACTTCa----------tgacacaaatatattgaatgaaatgctagtagaggaaa----gga-aagaagtataagtaagataaatttctcatctttcatagcaagaaatcaattact-------taaagttgatatatcaagaaacaaaggtataagt i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I a score=1855462.000000 s hg38.chr21_KI270874v1_alt 112119 153 + 166743 acactgctgaaaattatgatagtaaccactacaacacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA--TTTTTTCCTTCCATTTAATAATACCTTGTAGCCTATGACCATAGTTATGCTGAACATATATGAC s panTro5.chr21 3737727 153 + 33445071 acactgctgaaaattatgatagtaaccactacaacacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA--TTTTTTCCTTCCATTTAATAATACCATGTAGCCTATGACCATAGTTATGCTGAACATATATGAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363537 153 + 46275980 acactgctgaaaattatgatagtaaccactacaacacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA--TTTTTTCCTTCCATTTAATAATACCATGTAGCCTATGACCATAGTTATGCTGAACATATATGAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3302957 153 - 13858734 acactgctgaaaattatgatagtaaccaccacaacacctaaaaacagaaataagt--agttaccctatagagagggactgtgaACAGGTGA--TTTTTTCCTTCCATTTAATAATACCGTGTAGCCTATGACCATAGTTATGCTGAACATATATGAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486065 153 + 32716333 acactgctgaaaattatgatagtaaccactacaacacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaAGAGTTGA--TTTTTTCCTTCCATTTAATAATACCATGTAGCCTATGACCATAGTTATGCTGAACATGTATTAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441193 154 - 185818997 acactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA-TTTTTTTCCTTCCATTAAATAATACCACGTAGCCTATAACCATAGATGCACTGAACATATATTAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162265494 154 - 192294377 acactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA-TTTTTTTCCTTCCATTAAATAATACCACGTAGCCTATAACCATAGACGCACTGAACATATATTAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8746493 154 + 9440265 acactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA-TTTTTTTCCTTCCATTAAATAATACCACGTAGCCTATAACCATAGACGCACTGAACATATATTAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8475679 154 + 21915920 acactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA-TTTTTTTCCTTCCATTTAATAATACCACGTAGCCTATAACCATAGACGCACTGAACATATATTAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15050462 153 - 90373283 acactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA--TTTTTTCCTTCCATTTAATAATACCGTGTAGCCTATAACCATAGACAAACTGAACATATATTAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2234677 153 + 4234846 acactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA--TTTTTTCCTTCCATTTAATAATACCACGTAGCCTATAACCATAGACGCACTGAACATATATTAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 233644 153 - 13750039 acactgtggaaaattatgatagtaaccactgcaatacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGA--TTTTTTCCTTCCATTTAATAATACCATGTAGCCTATAACCATAGACACACTGAACATATACTAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21949681 153 + 50472720 acactgcagaaaattatgaaggtaaccactacaacacctaaaagcagaaataagc--agttcccctagagagtgggactgtgaaCAAGTGA--TTTTTTTCTTCCATTTGATAATATTATGTAGCCTATGACCATAGTTACCCTGAACATATATTAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051478 154 + 13128814 acactgcagaaaattatgatggtaaccactacaacacctaaaaacagaaataagt--agttaccctacagagcgggactgtgaACAGGTGA-TTTTTTTTCTTCCCTTTAATAATATTACGTAGCCTACGACCATAGTTACACTGAACATATATTAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628253 154 - 14377064 acactgcagaaaattatgatggtaaccactacaacacctaaaaacagaaataagt--agttaccctatagagtgggactgtgaACAGGTGG-GTTTTTTTCTTCCATTTATTAATATTATGTAGCCTATGACCATAGTTACCCTGAACATATATTAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766238 155 + 9889416 acactgcagaaaattatgatagtaaccactacaacacctaaaaacggaaataagt--agttaccctagagagtgggactgTCAACAGGTGATTTTTTTTTCTTCCATTTAATAATATTATGTAGCCTATGACCATAGTTTCCCTGAACATATATTAC i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1114738 150 + 2694913 atactattgaaaattacaatgg-aactactaggagacctaaaaatggaaataa----agttaccctagagagcgagactgtgaACAAGTGA--CTTTTCCTGTCCATTTAATACCATTGTAGAGCCTACGACCATATTCACCCTGTGTGTGTATTAC i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20768915 140 - 38779656 atattcctaaaaattacaatggtaactaccaggatacctaaaaacagaaataa----agttaccctagagagtgggactgtgaACAGGTGA--CTTTTCCTGT----------CCATTGTGGAGCCCTCAACCATTTTCA-CCTGTACATATATTAC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78137113 129 + 98207768 --ACATATAAACATTGTAATAGCAACCACCAAGAAATC------CAGAGATAACT--GCTCATACCATGAAG---------------ATGG--CTTTTCCTATCCATTACAAATTATTACATACCCTATAGCCATA-TTACCCTGTGTGTATATTAC i mm10.chr16 C 0 I 89 s dasNov3.JH568778 3645156 154 - 6883506 gtaccattgaaaattatgatgggagccactaggaaatttaaaaacagaaatcggtaaagttactctg-ggagtcagactgtggacaggtga--tctttactttccatttaatatcattatatactatatggatatttttgtcctctgcatgtattat i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19218323 335 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I a score=1791653.000000 s hg38.chr21_KI270874v1_alt 112272 155 + 166743 ATTCATATGAATAAACAAGTGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagatcatcaaatttctttgaggagtcaaagtaaaataagaattg-aaaataatcatgggatttagcaacatgaaggtcattg s panTro5.chr21 3737880 155 + 33445071 ATTCATATGAATAAACAAGTGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcaaagtaaaataagaattg-aaaataatcatgggatttagcaacatgaaggtcattg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363690 155 + 46275980 ATTCATATGAATAAACAAGTGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcaaagtaaaataagaattg-aaaataatcatgggatttagcaacatgaaggtcattg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303110 155 - 13858734 ATTCATACGAATAAACAAATGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagctaagattgtcagaccatcaaatttctttgaggagtcaaagtaaaataagaattg-acaataatcatgggatttagcaacatgaaggtcattg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486218 155 + 32716333 ATTCATACGAAAAAACAAATGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcaaagtaaaataagaattg-aaaataatcatggaatttagtaacatgaaggtcattg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441347 155 - 185818997 ATTCATACTAATAAACAAATGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcgaagtaaagtaagaattg-aaaacaatcatggaatttagcaacatgaaggtcattg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162265648 155 - 192294377 ATTCATACTAATAAACAAATGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcgaagtaaaataagaattg-aaaacaatcatggaatttagcaacatgaaggtcattg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8746647 155 + 9440265 ATTCATACTAACAAACAAATGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcgaagtaaaataagaattg-aaaacaatcatggaatttagcaacatgaaggtcattg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8475833 155 + 21915920 ATTCATACTCATAAACAAATGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcgaagtaaaataagaattg-aaaacaatcatggaatttagcaacatgaaggtcattg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15050615 155 - 90373283 ATTCATACTAATAAACAAATGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttcttggaggagtcaaagtaaaataagaattg-aaaataatcatggaatttagcgacataaaggtcattg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2234830 155 + 4234846 ATTCATACTAATAAACAAATGATGAAAGAAATAATAGAGCACaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcgaagtaaaataagaattg-aaaacaatcatggaatttagcaacatgaaggtcattg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 233797 155 - 13750039 ATTCATACTAATAAACAAATGATGAAAGAAATaataaagcacaatgttagaag---aagggagtagttaagattgtcagaccatcaaatttctttgaggagtcgaagtaaaataagaattg-aaaataatcctggaatttagcaacatgaaggtcattg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21949834 144 + 50472720 ATTCTTACTAATAAACAAATGATGAAAGTAATTATAAAGCACAATGGTagaag---aagggattcgttaagactgtcagaccatcaaata-----------tcagagtaaaagaaaaattg-aaaataatcatgaaatttagtaacatgaaggtcatta i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051632 155 + 13128814 ATTCATACTAATAAACAAACAATGAAAGTAATTATAAAGCACAATGGTagaag---aagggattagttaagattgtcagaccatcaaatatctttgaggagtcaaagtaaaagaaaacttg-aaaatgatcatgaaatttagtaacatgaaggtcatta i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628407 149 - 14377064 ATTCATACTAATAAACAAATGATGAAAGTAATTATAAAGCACAATGGTagaag---aagggattagttaagattgtcagaccatcaaatatctttgaggagtc------aaagaaaaattg-aaaataatcatgaaatttagtaacatgaaggtcatta i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766393 155 + 9889416 ATTCATACTAATAAACAGATGATGGAAGTAATTATAAAGCACAATGGTagaag---aagggattagttaagattgtcagaccatcaaatatctttgaggagtcaaagtaaaagaaaaattg-aaaataatcatgaaatttagtaacatgaaggtcatta i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1114888 156 + 2694913 ATTCATACTAATAACCAAATGATGAAAATAATAATCAAGCACCATATTAGaaggagaaaggagtggttaagaatgtcaaaatgtcaaatactgctgagaaatcaaagtaaaataagaattgaaaaataatcactggatttagcaatatgaaggtc---g i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20769055 134 - 38779656 ATTCATACTAATAATCGAATAATGAAAAGAATaataaagcacaatattagaaggacgaaggcatagttaagaatgtcaaactatcaactactgctgagaagtcaaagtaaa--aagaattgaaaaataatcactgg----------------------- i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3645310 118 - 6883506 atttgtactaaaataTAA-TGATGTAAATAATAATAa-----------aggag---gaaagagtggtcatgaatgtcaaagtgccaaatattgctgagaagt-aaagtaatataataattg-ttgatgatcactg------------------------ i dasNov3.JH568778 C 0 I 31 e micMur3.chr31 19218323 335 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=295836.000000 s hg38.chr21_KI270874v1_alt 112427 28 + 166743 ttcacattaactaagaaaattttactgg s panTro5.chr21 3738035 28 + 33445071 ttcatattaactaagaaaattttactgg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363845 28 + 46275980 ttcatattaactaagaaaattttactgg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303265 28 - 13858734 ttcatattaactaagaaaattttactgg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486373 28 + 32716333 ttcatattaactaagaaaattttactgg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441502 28 - 185818997 ttcctattaactaagaaaattttattgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162265803 28 - 192294377 ttcctattaactaagaaaattttattgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8746802 28 + 9440265 ttcctattaactaagaaaattttattgg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8475988 28 + 21915920 ttcctattaactaagaaaattttattgg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15050770 28 - 90373283 ttcctattaactaagaaaattttattgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2234985 28 + 4234846 ttcctattaactaagaaaattttattgg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 233952 28 - 13750039 ttcctactaactatgaaaattttattgg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21949978 28 + 50472720 tttatattaaccaagaaaattttactgg i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051787 28 + 13128814 tttatattcaccaagaaaattttactgg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628556 28 - 14377064 tttatattaaccaagaaaattttactgg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766548 28 + 9889416 tttatattaaccaagaaaattttacggg i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1115044 28 + 2694913 ttcatattaactaaaatagttttactgg i proCoq1.NW_012144079v1 C 0 I 79 e dasNov3.JH568778 3645428 31 - 6883506 I e micMur3.chr31 19218323 335 + 47401472 I e otoGar3.GL873528 20769189 0 - 38779656 C e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=1175456.000000 s hg38.chr21_KI270874v1_alt 112455 123 + 166743 agtggccaggcgcagtggctcacacctataatctcagcactttgggagacctgggcaggtgga-tcccttgagctcaggagttcgagaccaacctgggcaacatgacaaaaccccatctctata s panTro5.chr21 3738063 123 + 33445071 agtggccaggcgcagtggctcacacctataatctcagcactttgggagacctgggcaggtgga-tcccttgagctcaggagttcgagaccaacctgggcaacatgacaaaaccccatctctata i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363873 123 + 46275980 agtggccaggcgcagtggctcacacctataatctcagcactttgggagacctgggcaggtgga-tcccttgagctcaggagttcgagaccaacctgggcaacatgacaaaaccccatctctata i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303293 123 - 13858734 agtggccaggcacagtggctcacacctataatctcagcactttgggagacctgggcaggtgga-tcccttgagctcaggagttcgagaccaacctgggcaacatgacaaaaccccatctctata i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486401 123 + 32716333 agtggccaggtgcagtggctcacacctgtaatctcagcactttgggagacctgggcaggtgga-tcccttcagctcaggagttcgagaccaacccgggcaatatgacaaaaccccatctctata i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441530 123 - 185818997 agtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtgga-tcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162265831 123 - 192294377 agtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtgga-tcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8746830 123 + 9440265 agtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtgga-tcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476016 124 + 21915920 agtggccaggtgcagtggctcacacctataatctcagccctttgggagatctgtgcaggtggattcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15050798 123 - 90373283 agtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtaga-tcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235013 122 + 4234846 agtggccaggtgcagtggctcacacctataatctcagcactttgggagacctgtgcaggtgga-tcccttgagcgcaggagttagagactaacc-gggcaacatgacaaaaccccatctctatt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 233980 123 - 13750039 agcggccaggtgcagtggctcacatctataatctcagcactttgggagacctgtgcaggtgga-tcccttgagcgcaggagttcgagactaacctgggcaacatgacaaaaccccatctctatt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950006 123 + 50472720 agtggccaggcacagtggctcacacctataatcacagcacttcgggagacctggacaggcaga-tcccttgagctcaggaattcgagactaacctgggcaacatgatagaacaccatctctatt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051815 123 + 13128814 agtggccagacacggtggctcacacctgtcatcgcagcactttgggagacctggacaggcaga-tcccttgagctcaggaattcaagaccaacctgggcaacatggcaaaacaccatctctatt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628584 122 - 14377064 agtggccaggcacggt-gctcacacccgtaatcgcaacactttgggatacctggacaggcaga-tcccttaagctcaggaattcgagaccaacctgggcaacatggcaaaacaccatctctatt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766576 123 + 9889416 agtggccaggcacagtggctcacgcctgtaatcgcagcactttgggagacctggacaggcaga-tcccttgagctcaggaattcgagaccaacctgggcaacatggcaaaacaccatctctatt i aotNan1.NW_018487195v1 C 0 I 48 s otoGar3.GL873528 20769189 24 - 38779656 --------------------------------------------------------------------------------attca------------gcaatatgaagg-------tctctgt- i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1115072 79 + 2694913 I e dasNov3.JH568778 3645428 31 - 6883506 I e micMur3.chr31 19218323 335 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=191472.000000 s hg38.chr21_KI270874v1_alt 112578 50 + 166743 aaacaaacaaacaaac-aaaaaa-----tcagccaggtattgtggcatgcacgcat s panTro5.chr21 3738186 50 + 33445071 aaacaaacaaacaaac-aaaaaa-----tcagccaggtattgtggcatgcacccat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17363996 50 + 46275980 aaacaaacaaacaaac-aaaaaa-----tcagccaggtattgtggcatgcacccat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303416 51 - 13858734 aaacaaacaaacaaacaaaaaaa-----tcagccaggtattgtggcatgcacccat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486524 46 + 32716333 aaacaaacaaac-----aaaaaa-----tcagccgggtgtggtggcatgcacccat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441653 40 - 185818997 -------aaaaaaaaa-aaaaaa-----tcagccgggcatgggggcatgcacc--- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162265954 38 - 192294377 ---------aaaaaaa-aaaaaa-----tcagccgggcatgggggcatgcacc--- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8746953 38 + 9440265 ---------aaaaaaa-aaaaaa-----tcagccgggcatgggggcatgcacc--- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476140 47 + 21915920 taaaaaaaaaaaaaaa-aaaaac-----tcagccgggcatgggggcatgcacc--- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15050921 45 - 90373283 --ttaaaaaaaaaaaa-aaaaaa-----tcagccaagcatgggggcatgcacc--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235135 41 + 4234846 ------aaaaaaaaaa-aaaaaa-----tcagctgggcatgggggcatgcacc--- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234103 41 - 13750039 ------taaaaaaaaa-aaaaaa-----tcagccgggcatgggggcatgcacc--- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950129 37 + 50472720 -------ttaaaaaaa------------acagctgggtgtggtagcatgcatccac i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051938 42 + 13128814 -------ttaaaaaaa-aaaa------cacagttgtgtgtggtagcatgcatccac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628706 48 - 14377064 -------taaaaaaaa-aaaaaaaaaccacagctgagtgtggtagcatgcatccac i cebCap1.NW_016107322v1 C 0 C 0 e proCoq1.NW_012144079v1 1115072 79 + 2694913 I e dasNov3.JH568778 3645428 31 - 6883506 I e micMur3.chr31 19218323 335 + 47401472 I e otoGar3.GL873528 20769213 0 - 38779656 C e aotNan1.NW_018487195v1 8766699 48 + 9889416 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=82608.000000 s hg38.chr21_KI270874v1_alt 112628 13 + 166743 agtctcatctact s panTro5.chr21 3738236 13 + 33445071 agtctcatctact i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364046 13 + 46275980 agtctcatctact i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303467 13 - 13858734 agtctcatctact i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486570 13 + 32716333 agtcccatctact i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441693 8 - 185818997 -----cacctact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162265992 8 - 192294377 -----cacctact i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8746991 8 + 9440265 -----cacctact i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476187 8 + 21915920 -----catctact i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15050966 8 - 90373283 -----catctact i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235176 8 + 4234846 -----catctact i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234144 8 - 13750039 -----catctact i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950166 13 + 50472720 agtcccagctact i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051980 13 + 13128814 agtcccagctact i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628754 13 - 14377064 agtcctagctact i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766747 13 + 9889416 agtcccagctact i aotNan1.NW_018487195v1 I 48 C 0 s otoGar3.GL873528 20769213 11 - 38779656 --tcacattaact i otoGar3.GL873528 C 0 C 0 e proCoq1.NW_012144079v1 1115072 79 + 2694913 I e dasNov3.JH568778 3645428 31 - 6883506 I e micMur3.chr31 19218323 335 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=792042.000000 s hg38.chr21_KI270874v1_alt 112641 84 + 166743 cggggagctgaggtgggaggatcacttgatccaccgggtggttgaggttgcagtgagccgagatagcaccactgcactccagcc s panTro5.chr21 3738249 84 + 33445071 cggggagctgaggtgggaggatcacttgatccgccgggtggttgaggctgcagtgagccgagatagcaccactgcactccagcc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364059 84 + 46275980 cggggagctgaggtgggaggatcacttgatccgccgggtggttgaggctgcagtgagccgagatagcaccactgcactccagcc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303480 84 - 13858734 tggggagctgaggtgggaggatcacttgatccgccgggtggttgaggctgcagtgagctgagatagcaccactgcactccagcc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486583 84 + 32716333 cggggagctgaggtgggaggatcacttgatccgctgggtggttgaggctgcagtgagctgagatagcaccactgcactccagcc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441701 84 - 185818997 gggggagctgaggtgggaggatcacttgagccaccgggtggctgaggatgcagtgagccgagatagcaccactgcactccagcc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266000 84 - 192294377 gggggagctgaggtgggaggatcacttgagccaccgggtggctgaggatgcagtgagccgagatagcaccactgcactccagcc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8746999 84 + 9440265 gggggagctgaggtgggaggatcacttgagccaccgggtggctgaggatgcagtgagccgagatagcaccactgcactccagcc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476195 84 + 21915920 gggggagctgaggtgggaggatcacttgagccaccaggtggctgaggatgcagtaagccgagatagcaccactgcactccagcc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15050974 84 - 90373283 gggggagctgaggtgggaggatcacttgagccaccgggtggctgaggatgcagtgagccgagatagcaccactgcactccagcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235184 84 + 4234846 gggggaactgaggtgggaggatcacttgagccaccgggtggctgacgatgcagtgagccaagataacaccactgcactccagcc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234152 84 - 13750039 gggggagctgaggtgggaagatcacttgaaccactgggtggctgaggatacagtgagccgagatagcaccactgcactccagcc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950179 82 + 50472720 caggaagttgaggtgggaggatcacttgagccac-aggtgattgaggctgcagtgagccaagattgcaccact-ttttccagcc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5051993 83 + 13128814 cagaaagctgaggtgggagaatcacttgggccac-aggtggttgaggctgcagtgagccaagactgcatcactgctctccagtc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628767 83 - 14377064 caggaagctgaggtgggaggatcacttgggccac-aggtggttggggctgcagtgagccaagattgcaccactgctctccagcc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766760 83 + 9889416 agggaagctgaggtgggaggatcacttgggccac-aagtggttgaggctgcagtgagccaagattgcaccactgctctccagcc i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1115072 79 + 2694913 I e dasNov3.JH568778 3645428 31 - 6883506 I e micMur3.chr31 19218323 335 + 47401472 I e otoGar3.GL873528 20769224 0 - 38779656 C e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=361841.000000 s hg38.chr21_KI270874v1_alt 112725 42 + 166743 tggacgataga----gtgagactttgtctc--aaaaacaagaaaataa s panTro5.chr21 3738333 46 + 33445071 tggacgatagatagagtgagactttgtctc--aaaaacaagaaaataa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364143 46 + 46275980 tggacgatagatagagtgagactttgtctc--aaaaacaagaaaataa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303564 46 - 13858734 tggacgatagatagagtgagactttgtctc--aaaaacaagaaaataa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486667 46 + 32716333 tggatgatagatagagtgagactttgtctc--aaaaacaagaaaataa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441785 46 - 185818997 tgggcaatacatagagtgagaccttgtctc--aaaaacaagaaaagaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266084 46 - 192294377 tgggcaatacatagagtgagaccttgtctc--aaaaacaagaaaagaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8747083 46 + 9440265 tgggcaatacatagagtgagaccttgtctc--aaaaacaagaaaagaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476279 46 + 21915920 tgggcaatacatagagtgagaccttgtctc--aaaaacaagaaaagaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15051058 46 - 90373283 tgggcaatacatagagtgagaccttgtctc--aaaaacaagaaaagaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235268 46 + 4234846 tgggcaatacatagagtgagaccttgtctc--aaaaacaagaaaagaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234236 46 - 13750039 tgggcaatacatagagtgagaccttgtctc--aaaaacaagaaaagaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950261 42 + 50472720 tgggtgata----gagtgagaccttgtctc--aaaaaaaaggaaagaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5052076 42 + 13128814 tgggtaata----gagtgagaccttgtctc--aaaaaaaaggaaagaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628850 44 - 14377064 tgggtgata----gagtgagaccttgtctcaaaaaaaaaaggaaagaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766843 42 + 9889416 tgggtgata----gagagagaacttgtctc--aaaaacaaggaaagaa i aotNan1.NW_018487195v1 C 0 C 0 s dasNov3.JH568778 3645459 13 - 6883506 ---------------------------------taaatgagagagt-- i dasNov3.JH568778 I 31 C 0 e proCoq1.NW_012144079v1 1115072 79 + 2694913 I e micMur3.chr31 19218323 335 + 47401472 I e otoGar3.GL873528 20769224 0 - 38779656 C e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=328955.000000 s hg38.chr21_KI270874v1_alt 112767 31 + 166743 aagaaaattttactggaataattggtgtagg s panTro5.chr21 3738379 31 + 33445071 aagaaaattttactggaataattggtgtagg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364189 31 + 46275980 aagaaaattttactggaataattggtgtagg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303610 30 - 13858734 aagaaaattttac-ggaataattggtgtagg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486713 30 + 32716333 aagaaaattttactggag-aattggtgtagg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441831 31 - 185818997 aagaaaattttactggagtaattggtgtagg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266130 31 - 192294377 aagaaaattttactggagtaattggtgtagg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8747129 31 + 9440265 aagaaaattttactggagtaattggtgtagg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476325 31 + 21915920 aagaaaattttactggagtaattggtgtagg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15051104 31 - 90373283 aagaaaattttactggagtaattggtgtagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235314 31 + 4234846 aagaaaattttactggagtaattggtgtagg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234282 31 - 13750039 aagaaaattttactggagtaattggtgtagg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950303 31 + 50472720 aagaaaattttactgaagtaatgagtgaagg i calJac3.chr21 C 0 I 9 s saiBol1.JH378168 5052118 31 + 13128814 aagaaaattttactggagtaatgggtgtagg i saiBol1.JH378168 C 0 I 9 s cebCap1.NW_016107322v1 9628894 31 - 14377064 aagaaaatttgactggagtaacgggtacagg i cebCap1.NW_016107322v1 C 0 I 9 s aotNan1.NW_018487195v1 8766885 31 + 9889416 aagaaaattttactggagtaatgggtgtagg i aotNan1.NW_018487195v1 C 0 I 6 s otoGar3.GL873528 20769224 31 - 38779656 aagaaagtttccgtggagtcatggcagctgg i otoGar3.GL873528 C 0 I 8 s dasNov3.JH568778 3645472 24 - 6883506 -------tttaaccagagtaacaggggcaga i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1115072 79 + 2694913 I e micMur3.chr31 19218323 335 + 47401472 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=715658.000000 s hg38.chr21_KI270874v1_alt 112798 57 + 166743 --------tgaagtaggct-gagaatgagtaagcagtgagaaatacaagacaacaaatactaactc s panTro5.chr21 3738410 57 + 33445071 --------tgaagtaggct-gagaatgagtaagcagtgagaaatacaagacattaaatactaactc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364220 57 + 46275980 --------tgaagtaggct-gagaatgagtaagcagtgagaaatacaagacattaaatactaactc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303640 57 - 13858734 --------tgaagtaggct-gagaatgagtaagcagtgagaaatacaagacattaaatactaactc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486743 57 + 32716333 --------tgaagcaggct-gagaatgagtaagcagtgagaaatacaagacattaaataccaactc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441862 57 - 185818997 --------tgaagcaggca-gagaatgagtaagcagtgagaaatacaagacagtaaataccaactc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266161 57 - 192294377 --------tgaagcaggca-gagaatgagtaagcagtgagaaatacaagacagtaaataccaactc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8747160 57 + 9440265 --------tgaagcaggca-gagaatgagtaagcagtgagaaatacaagacagtaaataccaactc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476356 57 + 21915920 --------tgaagcaggca-gagaatgagtatgcagtgagaaatacaagacagtaaataccaactc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15051135 57 - 90373283 --------tgaagcaggca-gagaatgagtatgcggtgagaaatacaagacagtaaataccaactc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235345 57 + 4234846 --------tgaagcaggca-gagaatgagtatgcggtgagaaatacaagacagtaaataccaactc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234313 57 - 13750039 --------tgaagcaggta-gagaatgagtaagcggtgagaaatacaagacagtaaataccagctc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950343 57 + 50472720 --------tgaagcaggtt-gagaatgagtaagcagtgagaaatacaagacagtaaatatcaactc i calJac3.chr21 I 9 C 0 s saiBol1.JH378168 5052158 57 + 13128814 --------tgaagcaggtt-gaaaataagcaagcagtgagaaatacaagacagtaaatatcaactc i saiBol1.JH378168 I 9 C 0 s cebCap1.NW_016107322v1 9628934 57 - 14377064 --------tgaagcaggtt-gagaatgagcaagcagtgagaaatacaaaacagtaaatatcaactc i cebCap1.NW_016107322v1 I 9 C 0 s aotNan1.NW_018487195v1 8766922 57 + 9889416 --------tgaggcaggtt-gagaatgagtaagcagtgagaaatacaagacagtaaatatcaactc i aotNan1.NW_018487195v1 I 6 C 0 s micMur3.chr31 19218658 56 + 47401472 --------tgaagcaggtt-gagaatgactaggtagtgaggaatacaagacagC-AATACCAACTC i micMur3.chr31 I 335 I 4 s otoGar3.GL873528 20769263 58 - 38779656 --------tgaagcagggtagagaatgagcaggtagtcaggaatgccagacggtgaatatcaactc i otoGar3.GL873528 I 8 I 4 s dasNov3.JH568778 3645496 64 - 6883506 tgccaaattgaagt-ggtt-tggaatgactaggtgatgtggcatgcaagagagtgaatatcaactc i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1115072 79 + 2694913 I e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=1387507.000000 s hg38.chr21_KI270874v1_alt 112855 110 + 166743 tctcaagatatttggcttcaaggaggagaatagaaatagggctatagttt-----gaaagtggagt---acatactacttgcagtctttgacattt-ttattttaagataagagatact s panTro5.chr21 3738467 110 + 33445071 tctcaagatatttggcttcaaggaggagaatagaaatagggctatagttt-----gaaagtggagt---acatactacttgcagtctttgacattt-ttattttaagataagagacact i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364277 110 + 46275980 tctcaagatatttggcttcaaggaggagaatagaaatagggctatagttt-----gaaagtggagt---acatactacttgcagtctttgacattt-ttattttaagataagagacact i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303697 110 - 13858734 tctcaagatatttggcttcaaggaggagaatagaaatagggctatagttt-----gaaagtggagt---acatactacttgcagtctttgacattt-ttattttaagatgagagatact i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486800 110 + 32716333 tttcaagatatttggcttcaaggaggagaatagaaatagggctatagttt-----gaaagtggagt---acatactatttacagtctttgccattt-ttattttaagataagagatact i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155441919 110 - 185818997 tctcaagatctttggcttccaggaggagaaaagaaagagggcaatagttt-----gaaagtggaat---gcatactacttgtagtctttgccactt-ttattttaagacaagagatact i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266218 110 - 192294377 tctcaagatctttggcttccaggaggagaaaagaaagagggcaatagttt-----gaaagtggaat---gcatactacttgtagtctttgccactt-ttattttaagacaagagatact i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8747217 110 + 9440265 tctcaagatctttggcttccaggaggagaaaagaaagagggcaatagttt-----gaaagtggaat---gcatactacttgtagtctttgccactt-ttattttaagacaagagatact i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476413 110 + 21915920 tctcaagatctttggcttccaggaggagaaaagaaagagggcaatagttt-----gaaagtggaat---acataccacttgtagtctttgccactt-ttattttaagacaagagatact i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15051192 110 - 90373283 tctcaagatctttggcttccaggaggagaaaagaaagagggctatagttt-----gaaagtgaaat---acatactacttgtagtctttgccactt-tcattttaagacaagagatact i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235402 110 + 4234846 tctcaagatctttggcttccaggaggagaaaagaaagagggctatagttt-----gaaagtggaat---acatactacttgtagtctttgccactt-ttattttaagacaagagatact i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234370 108 - 13750039 tctcaagaactttggcctcaaggaggagaaaagaaagagggctatagttt-----gaaagtggaat---acatactacttgtagtc--tgtcactt-ttattttaagacaagaaatact i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950400 110 + 50472720 tctcaagatatttggcttcaaggagaagaatagaaatagggctgtagtta-----gaaagtggagg---tcatactacttgcagtctttgccattt-ttagtttaagataagagatact i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5052215 110 + 13128814 tcttaagatatttggcttccaggaggagaatggaaatagggctgtagtta-----gaaagtggagg---tcatactacttgcagtctttgccattt-ttattttaagataagagatact i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9628991 110 - 14377064 tctcaagatatttggcttcaaggaggagaatagaaatagggctgtagtta-----gaaagtggagg---tcatactacttgtagtctttgccattt-ttagtttaagataagagatact i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8766979 110 + 9889416 tcttaagatatttggcttcaaggaggagaatagaaatagggttgtagtta-----gaaagtggagg---tcatactacttgtagtctttgccattt-ttggtttaagataagagatatt i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19218718 108 + 47401472 TCTCAAGATAGTTGGCTTCAAGGAGAAGGATAGAAATAGGGCTATAGTTA-----GAATATGCAGTTGATGATACTACTTTTAGTCTTTGCCATTT-CTACTT-----TAAGAGCCACT i micMur3.chr31 I 4 C 0 s proCoq1.NW_012144079v1 1115151 111 + 2694913 tctcaagatagttggctttaaggagaaggacagaaatagggctatcgtta-----gaatgtggagt---caatactatttttagtctttgtcatttgctacttgaaaataagagacact i proCoq1.NW_012144079v1 I 79 C 0 s otoGar3.GL873528 20769325 94 - 38779656 tctcaagatagctgacttcaaggagacgagcagaaataagattatagtca-----gaatgtggagt---caatactatttttaatctttgccattg-ctactt---------------- i otoGar3.GL873528 I 4 C 0 s dasNov3.JH568778 3645560 111 - 6883506 --tcaagatatttagcttaaaggaggaaaatagaaatgtgtctatggttataaaggaaagtctagc---aaatattgtttttagtttttgttattg-ctattttaagatgagaaaca-- i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13842410 246 + 39895921 I e mm10.chr16 78137242 89 + 98207768 I a score=1847394.000000 s hg38.chr21_KI270874v1_alt 112965 137 + 166743 taaacacatttaaatgtacatg----gaaatgattgagtagaggaatcctg-gt---ttagtgactggggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------aggaatataatcagaag-ca-agagatggaagactgg s panTro5.chr21 3738577 137 + 33445071 taaacacatttaaatgtacatg----gaaatgattgagtagaggaatcctg-gt---ttagtgactggggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------aggaatataatcagaag-ca-agagatggaagactgg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364387 137 + 46275980 taaacacatttaaatgtacatg----gaaatgattgagtagaggaatcctg-gt---ttagtgactggggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------aggaatataatcagaag-ca-agagatggaagactgg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303807 137 - 13858734 taaacacatttaaatgtacatg----gaaatgattgagtagaggaatcctg-gt---ttagcgactggggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------aggaatataatcagaag-ca-agagatggaagactgg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4486910 137 + 32716333 taaacacatttaaatgtacatg----gaaatgattgagtagaggaatcatg-gt---ttagtgactggggaaa------------------------------gagaaggtaagttaataagtttcctgagaaggatagc----------------------------------------aggaatataatcagaag-ca-agaggtggaagactgg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442029 137 - 185818997 taaacacatttaaatatacatg----gaaacgattgagtagaggaatcatg-gt---ttagtgacttgggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------agggatataatcagaag-ca-ggaggtggaagactaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266328 137 - 192294377 taaacacatttaaatatacatg----gaaacgattgagtagaggaatcatg-gt---ttagtgacttgggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------agggatataatcagaag-ca-ggaggtggaagactaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8747327 137 + 9440265 taaacacatttaaatatacatg----gaaacgattgagtagaggaatcatg-gt---ttagtgacttgggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------agggatataatcagaag-ca-ggaggtggaagactaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476523 137 + 21915920 taaacacatttaaatatacaag----gaaacgattgagtagaggaatcatg-gt---ttagtgacttgggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------agggatataatcagaag-ca-ggaggtggaagactaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15051302 137 - 90373283 taaacacatttaaatatacatg----gaaacgattgagtagaggaatcatg-gt---ttagtgacttgggaaa------------------------------gaggaggtaagctaataagtttcctgagaaggatagc----------------------------------------agggatataatcagaag-ca-agagatggaagactga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235512 137 + 4234846 taaacacatttaaatatacatg----gaaacgattgagtagaggaatcatg-gt---ttagtgacttgggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------agggatataatcagaag-ca-ggaggtggaagactaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234478 137 - 13750039 taaacacatttaaatatacacg----gaaatgattgagtacaggaatcatg-gt---ttagtgacttgggaaa------------------------------gagaaggtaagctaataagtttcctgagaaggatagc----------------------------------------agggatataatcagaag-ca-agaagtggaagactga i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950510 136 + 50472720 taaacacacctaaatgtacatg----gaaaggattgagtaaaggaatcata-gt---ttaatgacttgagaaa------------------------------gagaaggtaagctactaagtttcctgagaagggtagc----------------------------------------aggaatataattggaag-ca-agaggtggaagact-g i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5052325 137 + 13128814 taaacacacctaaatgtacatg----gaaaggactgagtagaggaatcatg-gt---ttaatgacttgggaca------------------------------gagaaggtaagctaataagtttcctgagaagggtagc----------------------------------------aggaatataattggacg-ca-agaggtgggagactgg i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629101 137 - 14377064 taaacacacctaaatgtacatg----gaaaggactgagtggaagaatcatg-gt---ttaatgacttgggaaa------------------------------gagaaggtaagctaataagtttcctgaaaagggtagc----------------------------------------aggaatataattggaag-ca-agaggtggaagactgg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8767089 177 + 9889416 taaacacacctaaatgtacatg----gaaaggattgagtagacgaatcgtg-gt---ttaatgacttgggaaa------------------------------gagaaggtaagctaataagtttcctgagaagggtagcaggaaacttattatttggaataataataagtttatatagaaggaatataattggaag-ca-agaggtggaagactgg i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19218826 138 + 47401472 TAaacacatttaaatgtagatg----ggaaagaccaagtagaggaggcaggagt---tgaattacttgggaaa------------------------------gagaaggtgtgctaataaatttccttagaagagtaaa----------------------------------------aggaatataattggaaa-ca-agaggtagaagactgg i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1115262 137 + 2694913 taaacacatttaaatgcagatg----ggaaggaccaagtcgaggaggcagg-gt---tgactgacttgggaaa------------------------------gagaaggtatgctaataaatttcctgagaagggtaga----------------------------------------aggaatataattgtcag-ca-agagatagaaggctgg i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20769419 140 - 38779656 -aaccatatttaaatatagatgtgaaggaaggaccatgtagagcaggttga-gt---tgaatgatttgggaag------------------------------gagaaggtatgctaataaacctcccaagaggggtaga----------------------------------------agaaatataattagaag-ca-agaaatagaagactga i otoGar3.GL873528 C 0 I 291 s canFam3.chr31 13842656 164 + 39895921 taaaaataaataaaTGTAGATG----GGAAGGATCAAGTAGAGACGGCAGG-gtaagccaattccttattataaatcttctgtgtatatattctgcttctctggagaactctgactaata-------caAAAagctaaga----------------------------------------aggaatatgattagaaacca-agaggcggaagcctgg i canFam3.chr31 I 246 C 0 s dasNov3.JH568778 3645671 118 - 6883506 --aacacattcacatgtctgta----ggaaagattgga--------------gc---tgaat-atttgggaaa------------------------------gaaaagcta----aatgagtttacaaagaaatgtaaa----------------------------------------gggaatatgatagggag-cagagatatggaggactgg i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78137242 89 + 98207768 I a score=1672913.000000 s hg38.chr21_KI270874v1_alt 113102 134 + 166743 accttagctagaaagaagaatagtac-tatcttgtacaagagaac-tgaagacaaaatgaaggtagatacatccgtctat-------gagtacatgaatagatttggtgacaaaaagttgagaagactcacccagtggttttt s panTro5.chr21 3738714 134 + 33445071 accttagctagaaagaagaatagtac-tatcttgtacaagagaac-tgaagacaaaatgaaggtagatacatccatctat-------gagtaaatgaatagatttggtgacaaaaagttgagaagactcacccagtggttttt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364524 134 + 46275980 accttagctagaaagaagaatagtac-tatcttgtacaagagaac-tgaagacaaaatgaaggtagatacatccatctat-------gagtaaatgaatagatttggtgacaaaaagttgagaagactcacccagtggttttt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3303944 131 - 13858734 accttagctaga---aagaatagtac-tatcttgcacaagagaac-tgaagacaaaatgaaggtagatacatccatctat-------gagtaaatgaatagatttggtgacaaaaagttgagaagactcacccagtggttttt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487047 134 + 32716333 accttagctagaaataagaatattac-tgtcttgtacaagagaac-taaagacaaaatgaaggtagatgcatccatctat-------gattaaatgcatagatttggtgacgaaaagttgaaaagactcacccagtggttttt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442166 133 - 185818997 accttagctagaaagaagaatagtac-ttctttgtacaagagaac-tgaagacaaaatgaagctagatgcatccgtctat-------gagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtggttttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266465 133 - 192294377 accttagctagaaagaagaatagtac-ttctttgtacaagagaac-tgaagacaaaatgaagctagatgcatccgtctat-------gagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtggttttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8747464 133 + 9440265 accttagctagaaagaagaatagtac-ttctttgtacaagagaac-tgaagacaaaatgaagctagatgcatccgtctat-------gagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtggttttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476660 133 + 21915920 atcttagctagaaagaagaatagtac-ttctttgtacaagagaac-tgaagacaaaatgaagctagatgcatccgtctat-------gagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtggttttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15051439 134 - 90373283 accttagctagaaagaagaatagtactttctttgtacaagagagc-tgaagacaaaatgaagctagatgcatccgtctat-------gagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtggtcttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235649 133 + 4234846 accttagctagaaagaagaatagtac-ttctttgtacaagagaac-tgaagacaaaatgaagctagatgcatccgtctat-------gagtaaacgcatagatttggtgacaaaaaattgagaagactca-ccagtggttttt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234615 133 - 13750039 accttagctagaaagaagaatagtgc-ttcttcgtacaagagaac-tgaagacaaaatgaaggtagatgcatccgtctat-------gagtaaatgcatagatttggtgacaaaaaattgagaagactca-ccagtgtttttt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950646 131 + 50472720 accttagctaga---aaagatagtacattctttgtacaagagaac-tgaagacaaaatgaatacagatgcatccatcttt-------gagtaaatgcacagatttggtggcaaaaacttgagaagagtcacctagtggt-ttt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5052462 130 + 13128814 accttagctaga---aaggacagtacattctttgtacaagagaac-tgaagac-aaatgaatacagatgcatccatctat-------gagtaaatgcacagacttggtgacaaaaacttggaaagagtcacctagtggt-ttt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629238 130 - 14377064 accttagctaga---aaggatagtacattctttgttcaagagaac-tgaagac-aaatgaatacagatgcatccatctgt-------gagtaaatgcacagacttggtgacaaaaacttggaaagagtcacctagtggt-ttt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8767266 131 + 9889416 accttaactaga---aaggatagtacattctttgtacaagagaac-tgaagacaaaatgaatacagatgcatccgtctat-------gagtaaatgcacagatttgttgacaaaaacttgggaagagtcacctagtggt-ttt i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19218964 125 + 47401472 gccttagccaggaagaaggatagttcattgtttgtacaggagaac-tgaagagaaaatgaatgcaaatgcatccatctat-------gagtaaatgcatagatttg----------gtgaagaaaattcacctattggtttct i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1115399 120 + 2694913 accttagctaggaagaaggctagttcattctttgtacaagagaac-tgaagagaaaatgaatgcaaatgcatccatctattttggtggagaaaa----------------------gttgagaaaattcacctagtggtttct i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20769850 135 - 38779656 accctagctgggagctaggatagttcattcttcgtacaggagaac-tggagagaaaatgaatgcgaacttgttcatctat-------gagtaagcacatagatttggtgaagaaaagttgagaaaatttgcctagtggtttct i otoGar3.GL873528 I 291 C 0 s canFam3.chr31 13842820 132 + 39895921 acctcagctagg---aagaacaattcatcttccatagaggagaccatgaagagagaatgaatacagattcatcaatgtat-------gggtaagtgcatagattccatgatgaaaggt-gaggaaattcgtctactggtttcc i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3645789 131 - 6883506 gtcttacctggg---aaggtcagttcctcctttatactggagaaa-tggataaagaatgaatgcagatgcatcaatctat-------gggaaagtgcatcgatttgataaggaaaggttga-aaaattaatctagtggtttct i dasNov3.JH568778 C 0 I 236 e mm10.chr16 78137242 89 + 98207768 I a score=4495089.000000 s hg38.chr21_KI270874v1_alt 113236 319 + 166743 atatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaaaagttgtgaaatattttttgcacagaatgggagagggttgaccagtaaagtgtagcaggctcactggtcaatattaa-ggtccaagtaaggaactaatgaatggaagttgaaagcactatgctgag-ttcattattttct-ct--------atgagtgct-cgtttgcttatgcacattcttagagaaaccaggtatttcaggtgatgaagggctggta-ctttgccagagagaagtgatgaaagacagaagggcaaggcaattTTGCCTATTTTT s panTro5.chr21 3738848 319 + 33445071 atatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaaaagttgcgaaatattttttgcacagaatgggagagggttgaccagtaaagtgtagcaggctcactggtcaatattaa-ggtccaagtaaggaactaatgaatggaagttgaaagcaatatgctgag-ttcattattttct-ct--------atgagtgct-cgtttgcttatgcacattcttagagaaaccaggtatttcaggtgatgaagggctggtg-ctttgccagagagaagtgatgaaagacagaagggcaaggcaattTTGCCTATTTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364658 319 + 46275980 atatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaaaagttgtgaaatattttttgcacagaatgggagagggttgaccagtaaagtgtagcaggctcactggtcaatattaa-ggtccaagtaaggaactaatgaatggaagttgaaagcaatatgctgag-ttcattattttct-ct--------atgagtgct-cgtttgcttatgcacattcttagagaaaccaggtatttcaggtgatgaagggctggtg-ctttgccagagagaagtgatgaaagacagaagggcaaggcaattTTGCCTATTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304075 319 - 13858734 acatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaaaagttgtgaaatattgtttgcacagaatgggagagggttgaccagtaaagtgtagcaggctcactggtcaatattaa-ggtccaagtaaggaactaatgaatggaagttgaaagcaatatgctgag-ttcattattttct-ct--------atgagtgct-cgtttgcttatgcacattcttagagaaaccaggtatttcaggtgatgaagggctggtg-ctttgccagagagaagtgatgaaagacagaagggcaaggcaattTTGCCTATTTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487181 319 + 32716333 atatactctgtgaag-aatgtaacaaagttacatgcagaagtttaaggagagtagaaaagttgtgaaatattttttgcacagaatgggagagggttggccagtaaagtgtagcaggctcactggtcagtattaa-ggtccaagtaaggaactaatgaatgggagttgaaagcaatatgctgag-ttcattattttct-ct--------aggagtgct-cgtttgcttatgcacatgcttagagaaaccaggtatttcaggtgatgagggactggtg-ctttgccagagagaagtgatgaaagacaaaagggcaaggcaattTTGCCTATTTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442299 319 - 185818997 atatactctgtgaag-aatgtaacaaagttacatgcagaagttcgaggagagtagaacatttgtgaaatattttttgcacagaatgggagacggttgactagtaaagtggagcaggctcactggtcaatattaa-ggtccaagtaaggaactaacaaatgcaagttgaaggcaatatgctgag-ttcattattttct-ct--------agtagtgct-cgtctgcttatgcgcatgcttagagaaagcaggtattttgggtgatgaagggttggtg-ttttgccagagagaagtgatgaaagacagaagagcaaggcaattTTGCCTATTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266598 319 - 192294377 atatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaacatttgtgaaatattttttgcacagaatgggagacggttgactagtaaagtggagcaggctcactggtcaatattaa-ggtccaagtaaggaactaacaaatgcaagttgaaggcaatatgctgag-ttcattattttct-ct--------agtagtgct-cgtctgcttatgcgcatgcttagagaaagcaggtattttgggtgatgaagggttggtg-ttttgccagagagaagtgatgaaagacagaagaacaaggcaattTTGCCTATTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8747597 319 + 9440265 atatactctgtgaag-aatataacaaagttacatgcagaagtttgaggagagtagaacatttgtgaaatattttttgcacagaatgggagacggttgactagtaaagtggagcaggctcactggtcaatattaa-ggtccaagtaaggaactaacaaatgcaagttgaaagcaatatgctgag-ttcattattttct-ct--------agtagtgct-cgtctgcttatgcgcatgcttagagaaagcaggtattttgggtgatgaagggttggtg-ttttgccagagagaagtgatgaaagacagaagagcaaggcaattTTGCCTATTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8476793 319 + 21915920 atatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaagatttgtgaaatattttttgcacagaatgggagacggttgactagtaaagtggagcaggctcactggtcaatattaa-ggtccaagtaaggaactaacaaatgcaagttgaaagcaatatgctgag-ttcattattttct-ct--------agtagtgct-cgtctgcttatgagcatgcttagagaaagcaggtattttgggtgatgaagggttagtg-ttttgccagagagaagtgatgaaagacagaagagcaaggcaattTTGCCTATTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15051573 317 - 90373283 atgtactctgtgaag-aatgtaacaaaattacatgcagaagtttgaggagagtagaacatttgtgaaatatttgttgcacagaatgggagacggttgactagtaaaatggagcaggctcactggtcaatattaa-ggtccaagtaagggactaacaaatgtaagttgaaagcaatatgctgag-ttcattattttct-ct--------agtagtgct-cgtctgcttatgcgcatgcttagagaaagcaggtatttcgggtgatgaagggttggtg-ttttgccagagagaagtgatgaaagacagaagagcaaggcaattttgccta--tat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2235782 319 + 4234846 atatactctgtgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaacatttgtgaaatattttttgcacagaatgggagacggttgactagtaaagtggagcaggctcactggtcaatattaa-ggtccaagtaagggactaacaaatgcaagttgaaagcaatatgctgag-ttcattattttct-ct--------agtagtgct-cgtctgcttatgcgcatgcttagagaaagcaggtatttcgggtgatgaagggttggtg-ttttgccagagagaagtgatgaaagacagaagagcaaggcaattTTGCCTATTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 234748 317 - 13750039 atatactc--tgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaaaatttgtgaaatattttttgcatagaatgggagacagttgaccagtaaagtggagcaggctcactggtcaatattaa-ggtccaagtaaggaactaacaaatgcaagttgaaagcaatatgctgag-ttcattattttct-ct--------agtagtact-cgtctgcttatgcgcatgcttagagaaagcaggtatttcgggtgatgaagggttggtg-ttttgccagagagaagtgatgaaagacagaagagcaaggcaattTTGCCTATTTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21950777 303 + 50472720 atatactctatgaag-aaggtaacaaagttacatgcagaactttgaggagagtagaaaagttttcaaatattttttgcacagaatgggagagggttgactagtaaagtatagcaggctcactggtcaatattaa--gtccaagtaaggaactaatcaatgtaagttgaaagcgatctgctgaa-ttcactattttct-ct--------agtagtgcc-gattt-tttatgtacatgcttagagaaagcagatatttcaagtga---------------tttgccagagagaaatgatgaaagacagaagggcaagacaatttagCCTATTTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5052592 318 + 13128814 atgtactctatgaag-aatgtaacaaagttacatgcagaagtttgagtagagtagaaaagtcttcaaatattttttgcacagaatgggagagggttgaccagtaaagtatagcaggctcaatagtcaatattaa--gtccaagtaaggaactaatgaatataagttgaaaacaatctgctagg-ttcactattttct-ct--------agtagtact-gatttgtttacgtacatgcttagagaaagcagatatttcaagtgatgcagggttggtg-ttttgccagagagaaatgatgaaaggcagaagggcaagacaattCTGCCTATTTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629368 317 - 14377064 atg-actctatgaag-aatgtaacaaagttacatgcagaagtttgaggagagtagaaaagtcttcaaatattttttgcgcagaatgggagagggttgaccagtaaaatatagcaggctcaatggtcaatatgaa--gtccaagtaaggaactaatgaatgtcagttgaaaacaatctgctaag-tttgctattttct-ct--------agtagtact-gatttgtttatgtacatgcttagagaaagcagatatttcaagtgatgcagggttggtg-ttttaccagagagaaatgatgaaagacagaagggcaagacaattTTGCCTATTTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8767397 318 + 9889416 atatactctatgaag-aatgtaacaatgttacacgcagaagtttgaggagagtagaaaagttttcaaatattttttgcacagaatgggagagggttgaccagtaaagtatagcagtctcactggtcaatattaa--gtccaagtaaggaactaatgaatgtaagttgaaagcaatctgctgag-ttcactattttct-ct--------agtagtgct-gatgtgtttatgtacaagcttagagaaagcagatatttcaagtgatgcagggttggtg-ttttgccagagagaaatgatgaaagacagaagggcaagacaattTTGCCTATTTTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19219089 314 + 47401472 acatactctgtgaat-aatgtaacaaagttaaatccagaagtttgagaagagtagaaaaattttgaagtgttttctacacagaatatgagagagttgaccattaaagtgcagcaggctcg-----tagtgttaagggtcccagtaaggaactcataaatttatgttggaagcagtttgctgag-ttgatcatgttct-tt--------agtggtgtt-tgtttgctcatgcgcatccttagagaaagcagatatttaggttgatgcagggttggtg-tcttgctagagagatggaatgaaagacagaaagg-aaggcaattTTGCCTATTTTT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1115519 313 + 2694913 acatactctgcgaag-aatgtaacaaagttacatccagaagtttgagaagagtag-aaaatcctgaagcgttttctacacagaatatgagagagttgaccagtacagagcagtaggctcg-----cagtgttaagggttcaagtaaggaactcgtgaatttatgttaaaagcaacctgctgag-ttcgtgatgttct-tt--------agcagtgct-tgtttgcttgtgcacatccatagagaaagcagatatttaggttgatgcagggttggtg-ttgtgccagagagatggaatgaaagacagaaagg-aaggcaattTTGCCTATTTTT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20769985 311 - 38779656 acatactctccaaag-aatgtaagaaagttacacctaggaatttgagaagaatagaaaatttttgaaatattttctgcacaatatatgagagagttgaccagtaaagtgcggcaggcttg-----cagtgggaaaggtccaaataaggcacttgtgaatctctgttagca----tctgccgag-tttgcgatgttctgtt--------agcagagct-tgtttgctcgtgcgcatgctcagagaaggcagctatttagggtgacgcgtggctggtg-ttttgccagagagatgtaatgaaagatggagagg-aagccaattttgcctattttc i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13842952 322 + 39895921 atatactctatgaagaaatgtaacaaagttgcatccagaagtttaaggagagtagaaaagttttgaaataatttctgtcttgagtggaaga-agttggccggtaaaatatagcaggcttgctgagtagtgttag-agtccaagcaaggaactaatgattttatgtgggaagcaatctgctgaa-ttcataatattct-ttatgcactcatttgcact-catttgctcatgcacatgcttcggagaagctgatacttggattgatgcagag-tggtg-ttttgtcagaaagacgtgatgacaaacagaagaacaaggtaatt----CTATGTTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3646156 316 - 6883506 atgtactctttgaag-agtataataaaggtacattcaaaggaaagaggaaagtacaaaagttctgaaataatttctacactgagtagaagattgttaaccaacaaagtatagcaggctctttgagcaatgttcaatgtccaagtgaggaactaacaaatttatgttagaaacaatctgatgagtttcacaattttct-ac--------aaaggtgccacatttatccatttgcagtcttagagaaagcaaatatttggactgatgcaggatttgtgttttttccagagagatgtgatgaaaga-------acaaagAAATGTTGCCTATTTTT i dasNov3.JH568778 I 236 C 0 e mm10.chr16 78137242 89 + 98207768 I a score=1774047.000000 s hg38.chr21_KI270874v1_alt 113555 118 + 166743 AGAGAGGTATTGAA------ACTGGCGTAGATACGTAATTTA-TGAAA---AGCAATATAACATTCTATTTTTCTCTAACTGAACTTGATTTTACTTTCAATCACCATTTATCCCTGAGGTGGAAAAT s panTro5.chr21 3739167 118 + 33445071 AGAGAGGTATTGAA------ACTGGCGTAGATACGTAATTTA-TGAAA---AGCaatataacattctatttttctctaactgaacttgattttactttcaatcaccatttatccctgaggtggaaaat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17364977 118 + 46275980 AGAGAGGTATTGAA------ACTGGCGTAGATACGTAATTTA-TGAAA---AGCaatataacattctatttttctctaactgaacttgattttactttcaatcaccatttatccctgaggtggaaaat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304394 118 - 13858734 AGAGAGGTATTGAA------ACTGGCGTAGATACATAATTTA-TGAAA---AGCaatataacattctatttttctctaactgaacttgattttactttcaatcaccatttatccctgaggcagaaaat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487500 114 + 32716333 AGAGAGGTATTGAA------ACTGGCATAGATACGTAATTTA-TGaa-------aatataacattctatttttctctaactgaacttgattttaccttcaatcaccatttatccctgaggcagaaaat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442618 118 - 185818997 AGATAGGTATTGAA------ACTGGAATAGATACGTAACTTA-TGAAA---AGCAATATAACATTCTGTTTTTCTCTAACTGAACTTGATTTTACTTTCAATCACCATTTATCCCTGAAGCAGAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162266917 118 - 192294377 AGATAGGTATCGAA------ACTGGAATAGATACGTAACTTA-TGAAA---AGCAATATAACATTCTGTTTTTCTCTAACTGAACTTGATTTTACTTTCAATCACCATTTATCCCTGAAGCAGAAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8747916 118 + 9440265 AGATAGGTATTGAA------ACTGGAATAGATACGTAACTTA-TGAAA---AGCaatataacattctatttttctctaactgaacttgattttactttcaatcaccatttatccctgaagcagaaaat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8477112 118 + 21915920 AGATAGGTATTGAA------ACTGGAATAGATACGTAACTTA-TGAAA---AGCaatataacattctatttttctctaactgaacttgattttactttcaatcaccatttatccctgaagcagaaaat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15051890 118 - 90373283 agataggtattgaA------ACTGGAACAGATACGTAATTTA-TGAAA---AGCAATATAACATTTTATTTTTCTCTAACTTAACTTGATTTTACTTTCAATCACCATTTATCCCTGAAGCAGAAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2236101 118 + 4234846 AGATAGGTATTGAA------ACTGGAATAGATACGTAACTTA-TGAAA---AGCaatataacattctatttttctctaactgaacttgattttactttcaatcaccatttatccctgaagcagaaaat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 235065 118 - 13750039 AGATAGGTATTGAA------ACTGGAATAGATACGTAATTTA-TGAAA---CGCAATATAACATTCTATTTTTCTCTAACTGAACTTGATTTTACTTTCAATCATCATTTATCCCTGAAGCAGAAAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21951080 118 + 50472720 AGAGAGGCATTGAA------ACTGGCATAGATATGTAATTtg-tgaaa---agcaacataacatcttatttttctctaactgaacttgattttactttcaatcaccatttatccctgaggcagaaaTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5052910 116 + 13128814 AGAGAGGTATTGAA------ACTGGCATAGATATGTAATTTG-TGAAA---AGCAATATAACATCCTATTTTTCTCTAACTGAACTTGATTTTACTTTAAATCACCATGTATCCCTGAGGCGAAA--T i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629685 117 - 14377064 AGAGAGGTATTGAA------ACTGGCATAGATATGTAATTTG-TGAAA---AGCAATATAACATCCTATTTTTCTCTAACTGAACTTGATTTTACTTTCAATCACCATTTATCCCTGAGGCGAAA-TT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8767715 118 + 9889416 AGAGAGGTATTGAA------ACTGGCATAGATATGTAATTtg-tgaaa---agcaatataacatcctttttttctctaactgaacttgattttactttcaatcaccatttatccctgaggcagaaaTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19219403 118 + 47401472 AGAGAGATATTGAA------ATTGATATAGATGAATAATTtg-tgaaa---aacaatgtaacattctatttttctctgactgaacttgatttcactttcagtcaccatttagcccagaggcagaaaaT i micMur3.chr31 C 0 I 826 s proCoq1.NW_012144079v1 1115832 118 + 2694913 AGAGAGGTATTGAA------ATTGATATAGATGAGTAATTtg-tgaaa---aacaatgtaacattctatttttctctgactgaacttgatttcactttcaatcaccatttagcccagaggcagaaaat i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20770296 126 - 38779656 agcgaagtattaaaatTGGTATTGGTATGGATGAGTAATTTG-TGAAAAACAACAACGCACCattctattttcctgtaactgaacttgatttcactttcaatcaccatttagcct-gaggcagaaaTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78137331 66 + 98207768 AGTGAAGGGTTAAA------ATTGGTCTAGGTACATAATTTGTTTAAA---AACAATAGAATAGTCTAATTATCT----------------------------------------------------- i mm10.chr16 I 89 C 0 s canFam3.chr31 13843274 117 + 39895921 AGAGAGGTATTAAA------ATTG-TATAGGTATGTCATTTG-TGAAA---AGTAATATAACATTCTATTTTTCTCTAACCAAACTTGATTCTACTACTCATCTCCATTTAGCCCAGGGGGAGGAAAA i canFam3.chr31 C 0 I 3 s dasNov3.JH568778 3646472 115 - 6883506 --AGAGTTATGGAA------AGAGTAGTAGATATAGTATTTG-TGAAT---ATATATATAACTTTCT-TTTTTCTCTAGCTGAGCTTAATTTGTCTCTCAATCTCCATTTATCCCACAGGCAGaaaaa i dasNov3.JH568778 C 0 C 0 a score=72415.000000 s hg38.chr21_KI270874v1_alt 113673 8 + 166743 ---TTTtattc s panTro5.chr21 3739285 8 + 33445071 ---ttTtattc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365095 8 + 46275980 ---ttGtattc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304512 8 - 13858734 ---ttTTATTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487614 8 + 32716333 ---ttTtattc i nomLeu3.chr25 C 0 I 1 s rheMac8.chr3 155442736 8 - 185818997 ---TTTTATTC i rheMac8.chr3 C 0 I 3 s macFas5.chr3 162267035 8 - 192294377 ---TTTTATTC i macFas5.chr3 C 0 I 3 s macNem1.NW_012019910v1 8748034 8 + 9440265 ---ttTtattc i macNem1.NW_012019910v1 C 0 I 2 s cerAty1.NW_012002954v1 8477230 8 + 21915920 ---ttTTATTC i cerAty1.NW_012002954v1 C 0 I 4 s chlSab2.chr2 15052008 8 - 90373283 ---TTTTATTC i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012102865v1 2236219 8 + 4234846 ---ttTtattc i manLeu1.NW_012102865v1 C 0 I 1 s colAng1.NW_012120598v1 235183 8 - 13750039 ---TTTTATTC i colAng1.NW_012120598v1 C 0 I 207 s calJac3.chr21 21951198 8 + 50472720 ---TTTtattc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053026 8 + 13128814 ---TTTTATTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629802 8 - 14377064 ---TTTtattc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8767833 8 + 9889416 ---TTTTATTC i aotNan1.NW_018487195v1 C 0 I 1 s proCoq1.NW_012144079v1 1115950 8 + 2694913 ---ttTTATTT i proCoq1.NW_012144079v1 C 0 I 3 s otoGar3.GL873528 20770422 4 - 38779656 ---TTTT---- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78137397 3 + 98207768 ----TTT---- i mm10.chr16 C 0 C 0 s canFam3.chr31 13843394 4 + 39895921 ---TTTT---- i canFam3.chr31 I 3 C 0 s dasNov3.JH568778 3646587 10 - 6883506 aaatttcttt- i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19219521 826 + 47401472 I a score=454595.000000 s hg38.chr21_KI270874v1_alt 113681 33 + 166743 aaaaaaaattactaatgcatggaatctaagcca s panTro5.chr21 3739293 33 + 33445071 aaaaaaaattactaatgcatggaatctaagcca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365103 33 + 46275980 aaaaaaaattactaatgcatggaatctaagcca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304520 32 - 13858734 -AAAAAAATTACTAATGcatggaatctaagcca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487623 33 + 32716333 aaaaaaaattactaatgcatggaatctaagcca i nomLeu3.chr25 I 1 C 0 s rheMac8.chr3 155442747 33 - 185818997 AAAAAAAATTACTAATGCATGGAATCTAAGCCA i rheMac8.chr3 I 3 C 0 s macFas5.chr3 162267046 33 - 192294377 AAAAAAAATTACTAATGcatggaatctaagcca i macFas5.chr3 I 3 C 0 s macNem1.NW_012019910v1 8748044 33 + 9440265 aaaaaaaattactaatgcatggaatctaagcca i macNem1.NW_012019910v1 I 2 C 0 s cerAty1.NW_012002954v1 8477242 33 + 21915920 AAAAAAAAGTACTAATGcatggaatctaagcca i cerAty1.NW_012002954v1 I 4 C 0 s chlSab2.chr2 15052017 33 - 90373283 AAAAAAAATTACTAATGTGTGGAATCTAAGCCA i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012102865v1 2236228 33 + 4234846 aaaaaaaattactaatgcatggaatctaagcca i manLeu1.NW_012102865v1 I 1 C 0 s colAng1.NW_012120598v1 235398 33 - 13750039 aaaaaaaaTTACTAATGcgtggaatctaagcca i colAng1.NW_012120598v1 I 207 C 0 s calJac3.chr21 21951206 33 + 50472720 aaaaaaaattactaatgcatggaatctaagcca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053034 33 + 13128814 AAAAAAAATTACTAATGCATGGAACCTAAGCCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629810 33 - 14377064 aaaaaaaattactaatgcatggaatctaagcca i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8767842 33 + 9889416 AAAAAAaatgactaatgcatggaatctaagcca i aotNan1.NW_018487195v1 I 1 C 0 s proCoq1.NW_012144079v1 1115961 33 + 2694913 AAAAAAAATTATTAAGACATGTAATCTATGCTG i proCoq1.NW_012144079v1 I 3 C 0 s otoGar3.GL873528 20770426 32 - 38779656 -AAAAACCTTATGAAGACCTGTAATCTACGCTG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78137400 16 + 98207768 --AAAA----ACTAAACCATAG----------- i mm10.chr16 C 0 C 0 s canFam3.chr31 13843398 31 + 39895921 --AAACAATTATTAATACGTGGAATCTGAGCTG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3646597 30 - 6883506 ---aaaaaatattaataCATGGAAACTAAGCTG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19219521 826 + 47401472 I a score=2143959.000000 s hg38.chr21_KI270874v1_alt 113714 146 + 166743 gataggaagcaaagtgaagacagtaaagggataaCAACAAGGGAGATGACACAAGA-----GAGA------CTAAGCCTAATTCTCACCTA---TGGATGATTATGGGTCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT s panTro5.chr21 3739326 146 + 33445071 gataggaagcaaagtgaagacagtaaagggataaCAACAAGGGAGATGACACAAGA-----GAGA------CTAAGCCTAATTCTCACCTA---TGGATGATTATGGGGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365136 146 + 46275980 gataggaagcaaagtgaagacagtaaagggataaCAACAAGGGAGATGACACAAGA-----GAGA------CTAAGCCTAATTCTCACCTA---TGGATGATTATGGGGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304552 146 - 13858734 gataggaagcaaagtgaagacagtaaagggataaCAACGAGGGAGATGACACAAGA-----GAGA------CTAAGCCTAATTCTCACCTA---TGGATGATTATGGGGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487656 145 + 32716333 gataggaaggaaagtgaagacaggaaagggataaCAACGAGGGAGATGACACAAGA-----GAGA------CTAAGCCTAATTCTCACCTA---TGGATGATTATGGGGCTATAAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACT-GATAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442780 146 - 185818997 GACAGGAAGGGCAGTGAAGACAGGAAAGGGATAACAACAAAGGAGATGACATAAGA-----GAGA------CTAAGTCTAATTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267079 146 - 192294377 gataggaagggcagtgaagacaggaaagggataaCAACAAAGGAGATGACATAAGA-----GAGA------CTAAGTCTAATTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748077 146 + 9440265 gataggaaggacagtgaagacaggaaagggataaCAACAAAGGAGATGACATAAGA-----GAGA------CTAAGTCTAATTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8477275 146 + 21915920 gataggaaggagagtgaagacaggaaagggataaCAACAAAGGAGATGACATAAGA-----GAGA------CTAAGTCTAATTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052050 146 - 90373283 GATAGGAAAGAGAGTGAAGACAGGAAAGGGATAACAACAAGGGAGATGACATAAGA-----GAGA------CTAAGTCTAATTTTCACCTG---TGGATGAATATGGCGCTATGAATGTTCTGCCAACTTGGTTCAGAATTGGCTCCATAACTGGATAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2236261 146 + 4234846 gataggaaggagagtgaagacaggaaagggataaCAACAAAGGAGATGACATAAGA-----GAGA------CTAAGTCTAATTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCCAGCCTGGTTCAGAATTGGCTCCATAACTGGATAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 235431 136 - 13750039 gataggaaggaaagtgaagacaggaaagggataaCAACAAAGGAGATGACACAAGA-----GAGA------CTAAGCCTAATTCTCACCTA---TGGATGATTATGGCACTATGAATGTTCTGCCACCCTGGTTCAGAATTGGCTCC----------AAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21951239 146 + 50472720 cataggaaggaaagtgaagacaggagaggTATAACAACAAGGGAGATGATACGAGA-----GAAA------CTAAGCCTAATTCTCACCTA---TGGATGATAATGGGGCTATGAAGGTTCTGCTAGCCTGGTTCAGAATTGGCTCCATAACTGGCTAAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053067 146 + 13128814 CATAGGAAGGAAAGTGAAGACAGGAGAGGTATAACAATGAGGGAGATGACATGAAA-----GAAA------CTAAGCCTAATTCTCACCTA---TGGATTATTATGGGGCTATGAATGTTCTGCTAGCCTGGTTCAGAATTGGCTCCATAACTGGCTAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629843 146 - 14377064 cataggaaggaaagtgaagacaggagaggTATAACAACGAGGGAGATGACACGAAA-----GAGA------CTAAGCCTACTTCTCACCTA---TGGATGATTATGGCGCTATGAATGTTCTGCTAGCCTGGTTCAGAATTGGCTCCGTAACTGGCTACC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8767875 146 + 9889416 cataggaaggaaagtgaagacaggagaggTATAACAACGAGGGAGATGACACGAGA-----GAGA------CTAAGCCTAATTCTCACCTA---TGGATGATTATGGGGCTATGAATGTTCTGCTAGCCTGGTTCAGAATTGGCTCCATAACTGGCTAAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19220347 145 + 47401472 GATAGGAAGGAAAGGGAAGACTGAAGAGGGATAATGATAAAGGAGATGACAC-AGA-----ATGA------CTGAGCCTGATTCTCACCTA---TGGATGATTGTGGGGCTCTGAATGTTCTGCCAGCCTGATCCATAATCAGCTCCATAACCGGATAAT i micMur3.chr31 I 826 C 0 s proCoq1.NW_012144079v1 1115994 145 + 2694913 GATAAGAAGGAAAGGGAAGACTGGAGAGGGATAATGATTAGGGAGATGACAC-AGA-----GCGA------CTGAGCCGGATTCCCACCTA---TGGATGATTGTGGGACTCTGAATTTTCTGCCAGCCTGATCCATAATCAGCTCCATAACTGGACAAT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20770458 138 - 38779656 GATAGGGAGGAGCGAGAAGCCTGGAGCGCGATAACAAGGAGGAAG-----CC-AGA-----GTGA------CTGAGCCTGATTCCCACCTC---TGGATGACCAT-GGCCTCTGAATGTTCTGCCAGCCCGG-CAGTAATCAGCTCCATAACCGTATAGC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78137416 126 + 98207768 GATACAAATAAAAATGAGGTCTAGAGAGAAATAATGATTAGGATCAAG-TACAAGA------------------------AGTCCCAACTACAGTGATGGACTACAGGGCCTTGAACATTCTGTAAGCCTGGTCAAGAACTGACTTCCTAT--------- i mm10.chr16 C 0 C 0 s canFam3.chr31 13843429 144 + 39895921 GATAGGAAGAAA----ATGTTGGAAATGGGATAATGATGAGGAAAATGACATAAGACAACTGGAT------CTAAG--TAATTCCCACCTA---TGGATGATTAT-GAGCTATAAATGTTCAGCCAGCCTGGTCTAGAATTGGCTCCAAAACTGGATAAT i canFam3.chr31 C 0 I 226 s dasNov3.JH568778 3646627 150 - 6883506 GATAAGAATGAATCTGAAGATTGAAGAGGGATAACAATTAGGGAGATGACACAAAA-----GAGAATGGCTTTAAG--TAATTCTCACCTA---TGGATGATTATGGGGCTATGAATGTCCTGCCAGCCAGATCCATAATTGTTTCCAAAATTGAATAAC i dasNov3.JH568778 C 0 C 0 a score=5075.000000 s hg38.chr21_KI270874v1_alt 113860 1 + 166743 -G s panTro5.chr21 3739472 1 + 33445071 -G i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365282 1 + 46275980 -G i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304698 1 - 13858734 -G i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487801 1 + 32716333 -G i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442926 1 - 185818997 -G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267225 1 - 192294377 -G i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748223 1 + 9440265 -G i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8477421 1 + 21915920 -G i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052196 1 - 90373283 -G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2236407 1 + 4234846 -G i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 235567 1 - 13750039 -G i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21951385 1 + 50472720 -G i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053213 1 + 13128814 -G i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629989 1 - 14377064 -A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768021 1 + 9889416 -G i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19220492 1 + 47401472 -G i micMur3.chr31 C 0 I 45 s proCoq1.NW_012144079v1 1116139 1 + 2694913 -G i proCoq1.NW_012144079v1 C 0 I 29 s otoGar3.GL873528 20770596 1 - 38779656 -A i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13843799 1 + 39895921 -G i canFam3.chr31 I 226 C 0 s dasNov3.JH568778 3646777 1 - 6883506 T- i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78137542 0 + 98207768 C a score=308217.000000 s hg38.chr21_KI270874v1_alt 113861 26 + 166743 CT-GGATCTGAAGGTGCTG-GACTCCCA- s panTro5.chr21 3739473 26 + 33445071 CT-GGATCTGAAGGTGCTG-GACTCCCA- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365283 26 + 46275980 CT-GGATCTGAAGGTGCTG-GACTCCCA- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304699 26 - 13858734 CT-GGATTTGAAGGTGCTG-GACTCCCA- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487802 26 + 32716333 CT-GGATCTGAAGGTGCTG-GACTCCCA- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442927 27 - 185818997 CTGGGATCTGAAGGTGCTG-GAGTCCCA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267226 27 - 192294377 CTGGGATCTGAAGGTGCTG-GAGTCCCA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748224 26 + 9440265 CT-GGATCTGAAGGTGCTG-GAGTCCCA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8477422 26 + 21915920 CT-GGATCTGAAGGTGCTG-GAGTCCCA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052197 26 - 90373283 CT-GGATCTGAAGGTGCTG-GAGTCCCA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2236408 26 + 4234846 CT-GGATCTGAAGGTGCTG-GAGTCCCA- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 235568 26 - 13750039 CT-GGATCTGAAGGTGCTG-GAGTCCCA- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21951386 26 + 50472720 CT-GGATCTGAAGGTGCTG-GACTCCCA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053214 26 + 13128814 CT-GGATCTGAAGGTGCTG-GACTCCCA- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9629990 26 - 14377064 CT-GGATCTGAAGGTGCTG-GACTCCCA- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768022 26 + 9889416 CT-GGATCTGAAGGTGCTG-GACTCCTA- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20770597 16 - 38779656 --CAGGCCTGAAGGTGCT----------- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78137542 27 + 98207768 TT-GGACCTGAATGTCCTACAACTCCCT- i mm10.chr16 C 0 C 0 s canFam3.chr31 13843800 26 + 39895921 CT-GGACCTGAAGGTGTTG-GAACTCTC- i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3646778 27 - 6883506 CT-GGGCCTGATGGTCCTG-GAACTCCCT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1116140 29 + 2694913 I e micMur3.chr31 19220493 45 + 47401472 I a score=242531.000000 s hg38.chr21_KI270874v1_alt 113887 16 + 166743 AACTCCAAATAATCCA s panTro5.chr21 3739499 16 + 33445071 AACTCCAAATAATCCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365309 16 + 46275980 AACTCCAAATAATCCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304725 16 - 13858734 AACTCCAAATAATCCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487828 16 + 32716333 AACTCCAAATAATCCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442954 16 - 185818997 AACTCCAAATAATCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267253 16 - 192294377 AACTCCAAATAATCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748250 16 + 9440265 AACTCCAAATAATCCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8477448 16 + 21915920 AACTCCAAATAATCCG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052223 16 - 90373283 AACTCCAAATAATCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2236434 16 + 4234846 AACTCCAAATAATCCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 235594 16 - 13750039 AACTCCAAATAATCCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21951412 16 + 50472720 AACTCCAGATAATCCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053240 16 + 13128814 AACTCCAGATAATCCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9630016 16 - 14377064 CACTCCAGATAATCCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768048 16 + 9889416 AACTCCAGATAATCCA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1116169 16 + 2694913 AATTCCAGATGATCCA i proCoq1.NW_012144079v1 I 29 C 0 s otoGar3.GL873528 20770613 16 - 38779656 CATTCCAGATGATCTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78137569 16 + 98207768 GACACCAGGTGATTCA i mm10.chr16 C 0 C 0 s canFam3.chr31 13843827 16 + 39895921 TACTCTAGATGATCAA i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3646805 16 - 6883506 GACTCCAGATGATTGG i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19220493 45 + 47401472 I a score=10726575.000000 s hg38.chr21_KI270874v1_alt 113903 617 + 166743 TACTAGGGAAAACAGGGGCTGACAATAAGAAACTGCCAGAAGCATAAGCTGACTAGAATATTAATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----CTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGACGGAGAATAAAGATATGTGGTCATTATGCTAG-TTTCACTGGATGCTTTAAA-ACTAATGCCACTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGGCTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCCTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCTACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACAATATAGGACAAATAATTTAAAGAAATTCCACTTTAAATTTGAACTTACGTTGACTAGTCAAGGCTCTTTTCCAAATCAAATCAGTAAAATAGT s panTro5.chr21 3739515 617 + 33445071 TACTAGGGAAAACAGGGGCTGACAATAAGAAACTGCCAGAAGCATAAGCTGACTAGAATATTAATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----CTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGACGGAGAATAAAGATATGTGGTCATTATGCTAG-TTTCACTGGATGCTTTAAA-ACTAATGCCACTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGGCTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCCTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCTACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACAATATAGGACAAATAATTTAAAGAAATTCCACTTTAAATTTGAACTTACGTTGACTAGTCAAGGCTCTTTTCCAAATCAAATCAGTAAAATAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365325 617 + 46275980 TACTAGGGAAAACAGGGGCTGACAATAAGAAACTGCCAGAAGCATAAGCTGACTAGAATATTAATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----CTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGACGGAGAATAAAGATATGTGGTCATTATGCTAG-TTTCACTGGATGCTTTAAA-ACTAATGCCACTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGGCTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTAACATTTGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCCTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCTACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACAATATAGGACAAATAATTTAAAGAAATTCCACTTTAAATTTGAACTTACGTTGACTAGTCAAGGCTCTTTTCCAAATCAAATCAGTAAAATAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3304741 617 - 13858734 TACTAGGGAAAACAGGGGCTGACAATAAGAAACTGCCAGAAGCATAAGCTGACTAGAATATTAATAAGTTCATATCTTGGCAACTATAATACCCAAAGGTCTTT-CTATCCA----CTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGAGGGAGAATAAAGATATGTGGTCATTATGCTAG-TTTCACTGGATGCTTTAAA-ACTAATGCCACTTTCAATTCTTGTTTCTAAGACAAGTGAAATTACCTCTGGCTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCCTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCTACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACACTATAGGACAAATAATTTAAAGAAATTCCACTTTAAATTTGAACTTACATTGACTAGTCAAGGCTCTTTTCCAAATCAAATCAGTAAAATAGt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4487844 617 + 32716333 TACCAGGGAAAACAGAGGCTGACAATAAGAAACTGCCAGAAGCATAAGCTGATTAAAATATTAATAAGTCCATGTCTTGGTAATTATAATACCCAAAGGCCTTT-CTATCCA----CTCTTGTCCATTTCACTTTTGTCATGTGATTTTCATTTAGACAGAGAATAAAGATATGTGGTCATTATGCTAG-TTTCACTGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTATCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAGGTGAATCACAGCCACAAAAGCTTACTCATCTGGGGTGTTTCCTAATCCTATCAACACAAGTCAGAGTCAACTTTTTCCACCTACATACACTTAGCTTTCAAATCAAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGGCAGGATTTGTCACACCATAGGACAAATAATTTAAAGAAATTCCACTTTAAATTTGAACGTACATTGACTAGTTAAGGCTCTTTTCCAAATCAAAGCAGTAAAAtagt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155442970 617 - 185818997 TACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAAGCATAAGCTGACTAGAATATTAAGAAGTCCCTATCTTGGCAATTATAACACCCAAAGCCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATATAGATATGTGGTCATTATGCTAG-TTTCACCAGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTGAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACTCCCTATCTTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAATCATCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAAGATTTGTCACACTATAAGACAAATAATTTAAAGAAATTTCACTTAAAATTTGAACTTACATTGACTATTCAAAGCTCTTTTCCAAATCAAATCAGTAACATAGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267269 617 - 192294377 TACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAAGCATAAGCTGACTAGAATATTAAGAAGTCCCTATCTTGGCAATTATAACACCCAAAGCCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATATAGATATGTGGTCATTATGCTAG-TTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTTGGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACTCCCTATCTTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAATCATCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAAGATTTGTCACACTATAAGACAAATAATTTAAAGAAATTTCACTTAAAATTTGAACTTACATTGACTATTCAAAGCTCTTTTCCAAATCAAATCAGTAACATAGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748266 617 + 9440265 TACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAAGCATAAGCTGACTAGAATATTAAGAAGTCCCTATCTTGGCAATTATAACACCCAAAGCCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATATAGATATGTGGTCATTATGCTAG-TTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACTCCCTATCTTTTGCATTTTAAGTGAGTCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAATCATCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAAGATTTGTCACACTATAAGACAAATAATTTAAAGAAATTTCACTTAAAATTTGAACTTACATTGACTATTCAAAGCTCTTTTCCAAATCAAATCAGTAACATAGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8477464 617 + 21915920 TACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAAGCATAAGCTGACTAGAATATTAAGAAGTCCATATCTTGGCAATTATAACACCCAAAGCCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATATAGATATGTGGTCATTATGCTAG-TTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTTAGTGGCCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACTCCCTATCTTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAATCATCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTAAGACAGGATTTGTCACACTATAAGACAAATaatttaaagaaatttcactttaaatttgaacttacattGACTATTCAAAGCTCTTTTCCAAATCAAATCAGTAACATAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052239 617 - 90373283 TACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAAGCATAAGCTGACTAGAATATTAAGAAGTCCATATCTTGGCAATTATAACACCCAAAGGCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGGTGGAGAATAAAGATATGTGGTCATTATGCTAG-TTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTTAGTAGTCT-AAATCTCCCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACTCCCTATCCTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAGTCGTCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACACTGTAAGACAAATAATTTAAAGAAATTTCACTTTAAATTTGAACTTACATTGACTATTCAAAGCTCTTTTCCAAATCAGATCAGTAACATAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2236450 617 + 4234846 TACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAAGCATAAGCTGACTAGAATATTAAGAAGTCCATATCTTGGCAATTATAACACCCAAAGCCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATATAGATATGTGGTCATTATGCTAG-TTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTTGGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTATACAACCCCCTATCTTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAATCATCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAAGATTTGTCACACTATAAGACAAATAATTTAAAGAAATTTCACTTAAAAGTTGAACTTACATTGACTACTCAAAGCTCTTTTCCAAATCAAATCAGTAACATAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 235610 617 - 13750039 TACTAGGGAAAACAGAGGCTGACAATAAGCAACTGCCAGAAACATAAGCTGACTAGAATATTAATAAGTCCATATCTTGGCAATTGTAACACCCAAAGGCCTTT-CTATCCA----TTTTTGCCCATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATAAAGATATGTGGTCATTATGCTAG-TTTCACCGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTCGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTGTTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTGACATTAGTTACACAACTCCCTACCCTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCCATCAACTCAAGTCACAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAATCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACACTATAAGATAAATAATTTAAAGAAATTTCACTTTAAATTTGAACTTACATTGACTATTCAAAGCTCTTTTCCAAATCAAATCAGTAACATAGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21951428 615 + 50472720 TACTTGGGTAGACAGAGGCTGACAATAAGCAACTGCCAGACGCATAAGCTGACCAGAATAATCATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----TTCTTGCCAATTTCAGTTTTATCATGTGATTTTCATTTAGATGGAGAAT--GGATACTTGGTCATTGTGCTAG-TTTCAACAGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTATTTCTAAAACAAGTGAAATTCTCTCTGACTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCTTGTATTTAAAATTGTTCTCTGTCTCTAACATTAGTCATACAACTCTCTACCCTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAGTCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACACTATAGGACAAGTCATTTAAAGAAATTCCACTTTCAATTTGAACTTACATTGACTAGCCAAGGTTCTTTTCCAAATCAAATCAGTAAAATAGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053256 616 + 13128814 TACTAGGATAGCCAGAGGCTGACAATAAGCAACTGCCAGAAGCGTAAGCTGACCAGAATAATCATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----TTTTTGCCTATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAAAATAAAGATACTTGGTCATTCTGCTAGTTTTCAATGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGG--TCTGTCTTTAATATTAGTTATACAACTCTCTACCCTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAGTCTGAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGGCAGGATTTGTCACACTATAGGACAAGTAATTTAAAGAAATTCCGCTTTAAATTCGAACTTACATTGACTGGTCAAGGTTCTTTTCCAAATCAAATCAGTAAAATAGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9630032 617 - 14377064 TACTAGGGTAGACAGAGGCTGACAATAAGCAACTGCCAGAAGCGTAAGCTGACCAGAATAATCATAAGTCCATATCTTGGCAATTATAATACCCAAAGGCCTTT-CTATCCA----TTTTTGCCAATTTCAGTTTTGTCATGTGATTTTAATTTAGATGGAGAATAAAGATACTTGGTCATTGTGCTAG-TTTCAACGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTGTGTTTAAAATTGGTCTCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAACTGGGGTGTTTCTTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAGTCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACACTATAGGACAAGTCATTTAAAGAAATTCCACTTTAAATTTGAACTTACATTGACTAGCCAAGGTTCTTTTCCAAATCAAATCAGTAAAATAGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768064 617 + 9889416 TACTAGGGTAGACAGAGGCTGACAATAAGCAACTGCCAGAAGCATAAGCTGACCAGAATAATCATAAGTCCATATCTTGGCAATTATAATACCCAAAGCCCTTT-CTATCCA----TTTTTGCCAATTTCAGTTTTGTCATGTGATTTTCATTTAGATGGAGAATAAAGATACTTGGTCATTGTGCTAG-TTTCAACAGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAAGTGAAATTATCTCTGACTGCAT--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTGTATTTAAAATTGGTCTCTGTCTCTAACATTAGTTATACAACTCTCTACCCTTTGCATTTTAAGTGAATCACAGCCACAAAAGCTTACTCAGCTGGGGTGTTTCTTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAGTTGAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACACTATAGGACAAGTAATTTAAAGAAATTCCACTTTAAATTTGAACTTACATTGACTAGCCAAGATTCTTTTCCAAATCAATTCAGTAAAATAGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19220538 611 + 47401472 TACTAGGGAAACCATGGGCTGACAATAAGCTACTGCCAGATGCAAAAGCGGACCAGATTAATAAGAAGTGCATGTCTTGGCAATTGCAATACCCAAGGGCCTTT-CCAGCCA----TTTTCGCCATTTCCAGTTTTGTCATGTGATTTTCATTTAGGTAGAGAATGAAGATACTTGATCATTATACTAG-TTTTATTGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCTAAGACAGGTGAAGTTATTTCTGACTCCAG--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTATATTTAAAATTG------GTCTCTAACATTAGTTATACAACTGTCTGCCCTTTGCATTTTAAGTAAATCACAGCCACAAAAGCTTCCTCAGCTGAGTTGTTTCTTAATCCCATCAACTCAAGTCAGAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAGTCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTCTGAGACAGGATTTGTCACACTGTAGGGCAAATAATTTAAAGAAATTCCACTGTAAAGTTGAACTTACATTGGCTAGTCAAGGCTCTTTTCCAAATCAAATCAGTAAAATAGT i micMur3.chr31 I 45 C 0 s proCoq1.NW_012144079v1 1116185 617 + 2694913 TAACAGGGAAACCATGGGCTGACAATAAGCTACTGCCAGATGCAAAAGTGGACCGGAATAATCAGAAGTGCATGTCTTGGCAATTGCAATACCCAAGGGCCTTT-CCAGCCA----TTTTCGCCACTTCCAGTTTTGTCATGTGATTTTCATTTAGGTAGAGAATGAAGATACTTGGTCATTGTACTAG-TTTTATTGGATGCTTTAAA-ACTAATGCCATTTTCAATTCTTGTTTCCAAGACAAGTGAAATTATTTCTGACTCCAG--AAGCAAGGTGGTATTTAGTAGTCT-AAATCTCTCTCCTATATTTAAAATTGGTCTCTGTCTCTAACATTAGTTATACAACTGTCTGCCCTTTGCATTTTAAGTAAATCACAGCCACAAAAGCTTCCTCAGCTGAGTCGTTTCTTAATCCCATCAACTCAAGTCAGAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAGTCTAAAATCCAAAGAAATATTTAAATTATTAAAGTCAATCTTCTGAGACAGGATTTGTAACACCGTAGAGCAAATAATTTAAAGAAATTCCACTGTAAAGTTAAACTTACATTGGCTAGCCAAGGCTCTTTTCCAAATCAAATCAGTAAAATAGT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20770629 610 - 38779656 -CACTGGGGAGGCAGGGGCTGACAGTAAGCCACCGCCTGATGCAAAAGCTGACC-GAATAATGAGAAGTGCACGTCTCGGCAAGTGCAACCTCCAAGGGCCTTT-CCATCCA----TTTTTGCCGTTTCCAGTTTCGTCATATGA-TTTCATTTCGACAAA----GAAGATACTTGGTCATTGTACTAC-CTTTACTGGACACCTTAAA-ACCAATGCCACTTCCGATTCTTCTTTCCAAGACAAGTGCAATTATTTCCAACTCCAT--AAGCAAGGTGGTATTCAGTAGTCT-AAATCTCTCTCCTCTATTTAAAATTGGTCTCTGCCTCTAACATTAGTTATACAACTGTCTACCCTTTGCATTTTAAGTAAATCACAGGCACAAAAGCTTCCTTAGCTGAGTTGTTTCTTAATCCTATCAACTCAAGTCAGAGTCATCTTTTTCCACCCACATACACTTAGCTTTCAAGGCTAAAATCCAGAGAAACATTTAAATTATTGAAGTCAGTCTTCTGAGACAGGATTTGTCACACTGGAGGGCAAATAATTTAAAGAAATCCCGCTGTAAATTTGAACTTATATTGGCTAGCCAACGCTCTTCTCCAAATCAAATCAGTAAAATAGT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78137585 607 + 98207768 CAGTAGAAAAGACAGAGGCTAGAAGTAAGCCATTGTCCAAAGCAAACATTGAGCAGAACGGTAAGAAGCCTCTGTCACGATAATTATAATACACAAAGGGCTTTCCTATCTC----TTTCTGTCAATCCTAGTTCTATCATATGATTTTCATTTAGATGAACAATGAAGATACTTTATCATTGTACCGG-TTTCATTGCACCCTTTAAATGCAAATGTCATTTTTAATTCTTGTTTA-AGGACAAGTGGAATCACTTCAGACTGCAT--AAGCAAGATGATATTTAATAGTCT-AAACTCCTCTCC-ATATTTGAAATTGGTCTGTCTCTCTAGCACTTGTGACATGTGCGTCTACCCTTTGCATTTTAAATGAATTGCTGCCACCGAAGCCTGCCCAGCTGAGTCACCTCATAATCCTATCAATTTCAGTCAACATCATC-CTATACACCTACATATACTTTGCTATCAAGTATAAAAACCAAAGAAACATTTATATTATTAAAGTCAATCTTGTGAAACAA-ATTTGTCTCTATGTAGAACAAATAATTTAAACAAATTTCACTGTATATTTGATCTTATGTTAGCT----AAGACTC----CCAAATCAAATTGGTAAAGTAAT i mm10.chr16 C 0 I 5616 s canFam3.chr31 13843843 615 + 39895921 CACTGGGAAAAA-----GCTGACAGTAAACTACTGCCAGATGCA-AAGCTGACCAGAATATTAAGAAGCCCATGTCTTGGCAGTTTAACTACCCACAG-CCTTT-CCATCCGTTTTTTTTTTTCCATCCCTGTTTTGTCATATGATTTTTATTTAGACAGAGAATGAAGACACTCCATCATTGTACTAG-TTTTATTGGCTGCTTTAAA-GGTAATGCCACTTCCGATTCTTGTTTAGAAGAAAAGTGAAATTATTTCTGACTGCATAAAAGCAAGGTGCTATTTAGTAGTCT-AAACCCCTCTCCTATATTTAAAATCATTCTCTGTCTCTAACATTAGTTACACAACTATCTACCCTTTGCATTTTAAGTGAATTGGAGCCACAAAAGCTTACTCAGCTGGGTTGTTTCTTAATCCTATCAATTCAAGTCAGAATCATCCTTTTCCACCCACATACACTTAGCTTTCAAGTCTAAAATCCAAAGAAACATTTAAATTATTAAAGTCAATCTTGTGAGACAGGATTTGTCACAGTGTAGG-CAAGCAATTTAAAGAAACTCTGACATAAATTTCAACTTACGCTGACCAGCCAAGGCTCATTCCCAAATCAAACCAGTGAACTAAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3646821 605 - 6883506 TACTGGGGAAGATTGGTACTGACAGTGGGCTATTGCCAGATGTAAAAGCTGACCACAATATTAAGAAGCCCTTGTCTTGGAAATTGTAATATCCAAGGACTTTT-CCATACA----TTTTT-TCCATCTCAGTTTTGTTACATGATTTTCATTTAGATGAAGAATAAAATTATTTGGTCATTGTACTAG-CTTTATTGGCTGTCTTAAA-GCTAATGTTATTTTCAATTCTTGTTTGGAAGAAAAGTGAAATGATTTCTGACAGCAT--AATCAAGGTGCTATTCAGTAGTCTAAAATCCCTCTCCTCTACCTAAAATTGGTCTCTTTCTCTAGCATTAGTTATACGACTG--TAACCTTTGCATTTTAAGTGAATCACAGACACAGAAG-----GAAACTGGCTTGTTTCTTAATCCTATAAACTCCAGTCAGAATCATCCTTTTCCACCCCCACACACTTAGTCTTCAAGTCTAAAATCCATAGAAATGTTTAAATTATTGAAGTCAATCTTGTGAGACAGGATTTGTCACACTGTAAG-CAAATAATTTCAAGAAATTCCAATGTAAATTTTAACTTACATTGGCTAGCCAAGTCTC----CCAAATCAAATCAATAAAATAAT i dasNov3.JH568778 C 0 C 0 a score=184951.000000 s hg38.chr21_KI270874v1_alt 114520 15 + 166743 ATTTGCTATGTTTTA-------- s panTro5.chr21 3740132 15 + 33445071 ATTTGCTATGCTTTA-------- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365942 15 + 46275980 ATTTGCTATGCTTTA-------- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3305358 15 - 13858734 atttgttatgtttta-------- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4488461 15 + 32716333 atttgttatgtgtta-------- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155443587 15 - 185818997 ATTTGTTATGTTTTC-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267886 11 - 192294377 A----TTATGTTTTC-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748883 15 + 9440265 ATTTGTTATGTTTTC-------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478081 15 + 21915920 CTTTGTTATGTTTTC-------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052856 15 - 90373283 ATTTGTTATGTTTTC-------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237067 15 + 4234846 ATTTGTTATGTTTTC-------- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 236227 15 - 13750039 ATTTGTTATGTTTTC-------- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21952043 15 + 50472720 ATTTGTTATGTTTTA-------- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053872 15 + 13128814 ATTTGTTATGTTTTA-------- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9630649 15 - 14377064 ATTTGTTATGTTTTA-------- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768681 15 + 9889416 ATTTGTTATGTTTTA-------- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19221149 15 + 47401472 ATTTGTTATGTTTTG-------- i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1116802 15 + 2694913 ATTTGTTATGTTTCG-------- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20771239 15 - 38779656 ATTCATTGTGTTCCG-------- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13844458 15 + 39895921 ATTTGTTTTGTTTTG-------- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3647426 23 - 6883506 ATTTGTGGGGTTTTTTTTCTTTG i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78138192 5616 + 98207768 I a score=937574.000000 s hg38.chr21_KI270874v1_alt 114535 76 + 166743 GCATTTTGTTTTAATGATCATGTTT----------------------------------------------------------------------GGGCATTGTTTTTATGTTTTATTA-TTT--TTACTACTCCCATAATATGGA-TTT s panTro5.chr21 3740147 76 + 33445071 GCATTTTGTTTTAATGATCATGTTT----------------------------------------------------------------------GGGCATTGTTTTTATGTTTTATTA-TTT--TTACTACTCCCATAATATGGA-TTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17365957 76 + 46275980 GCATTTTGTTTTAATGATCATGTTT----------------------------------------------------------------------GGGCATTGTTTTTATGTTTTATTA-TTT--TTACTACTCCCATAATATGGA-TTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3305373 76 - 13858734 gcattttgttttaatgatcatattt----------------------------------------------------------------------gggcattgtttttatgttttatTA-TTT--TTACTACTCCCATAATATGGA-TTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4488476 76 + 32716333 gcattttgttttaatgatcatgttt----------------------------------------------------------------------ggacattatttttatgttttatTA-GTT--TTACTACTCCTATAATGTGGA-TTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155443602 77 - 185818997 GCATTTTGTTTTAATGATCAAGTCT----------------------------------------------------------------------GGACGTTATTTTTATGTTTTATTA-TTT--TTACTACTCCTTTAATATGGAGTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267897 77 - 192294377 GCATTTTGTTTTAATGATCAAGTCT----------------------------------------------------------------------GGACGTTATTTTTATGTTTTATTA-TTT--TTACTACTCCTTTAATATGGAGTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748898 77 + 9440265 GCATTTTGTTTTAATGATCAAGTCT----------------------------------------------------------------------GGACGTTATTTTTATGTTTTATTA-TTT--TTACTACTCCTTTAATATGGAGTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478096 77 + 21915920 GCATTTTGTTTTAATGATCAAGTCT----------------------------------------------------------------------GGACGTTATTTTTATGTTTTATTA-TTT--TTACTACTCCTTTAATATGGAGTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052871 77 - 90373283 ACATTTTGTTTTAATGATCAAGTCT----------------------------------------------------------------------GGACGTTATTTTTATGTTTTATTA-TTT--TTACTACTCCTTTAATATGGAGTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237082 77 + 4234846 GCATTTTGTTTTAATGATCAAGTCT----------------------------------------------------------------------GGACGTTATTTTTATGTTTTATTA-TTT--TTACTACTCCTTTAATATGGAGTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 236242 75 - 13750039 GCATTTTGTTTTAATGATCAAGTTT----------------------------------------------------------------------GGGCGTTATTTT--TGTTTTATTA-TTT--TTACTACTCCTTTAATATGGAGTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21952058 77 + 50472720 ACATCTTGTTTGCATGATCAAGTTT----------------------------------------------------------------------GGACATTATTTTTATGTTTTATTA-TTT--TTACTACTCCTATAATATGGAGTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053887 77 + 13128814 ACATCTTGTTTATATGATCAAGTTT----------------------------------------------------------------------GGACATTATTTTTATGTTTTATTA-TTT--TTACTGCTCCTATAATATGGAGTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9630664 77 - 14377064 ACATCTTGTTTCTATGAGCAAGTTT----------------------------------------------------------------------GGACAATGTTTTTATGTTTTATTA-TTT--TTACTACTTCTATAATATGGAGTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768696 77 + 9889416 ACATCTTGTTTGTATGATCAAGTTT----------------------------------------------------------------------GGACGTTATTTTTATGTTTTATTA-TTT--TTACTACTCCTATAATATGGAGTTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19221164 71 + 47401472 A-----TGCTTTAATGACCAAGTTT----------------------------------------------------------------------GAGCATTATTTGTATGTTTTATTA-TTT--TTATTACTCCCATAATATAGAATT- i micMur3.chr31 C 0 I 1 s proCoq1.NW_012144079v1 1116817 72 + 2694913 A-----TGCTTTAATGACCAAGTTT----------------------------------------------------------------------AAGCattatttgtatattttattatttt--ttattattCCCATAATATAGAGTT- i proCoq1.NW_012144079v1 C 0 I 33 s otoGar3.GL873528 20771254 66 - 38779656 A-----TCCTTTAATGAGCAAATAT----------------------------------------------------------------------GAACATTAGTTTTATGTTTTA------T--TTATCACTCCCATAATATAGAGTT- i otoGar3.GL873528 C 0 I 1 s mm10.chr16 78143808 64 + 98207768 gtatactctttTAACTACCAGGATG----------------------------------------------------------------------GGGCATTACCTTT------------TTC--TTATTAC-ATTGCAATGTAGACTT- i mm10.chr16 I 5616 I 7 s canFam3.chr31 13844473 78 + 39895921 ATGTTTTGTTTTCATGACCGAGTTT----------------------------------------------------------------------GGGCATTATTTTCATGTGTAATTA-TTTTATTATGAACTCTGtattatagaatt- i canFam3.chr31 C 0 I 9 s dasNov3.JH568778 3647449 145 - 6883506 ATGCTTTGGTTTAATGACTGAGTTTCTAGCTCTAGCTAGAAAACTCAGAAATTTCGTGGAACTTAAGTTGAAGGTATAGAGAAATGTTGATGTAAAGGCattatttttacattttatta-ttt--tt-ttacttctataatatggaatt- i dasNov3.JH568778 C 0 C 0 a score=154382.000000 s hg38.chr21_KI270874v1_alt 114611 18 + 166743 ----------------ATAATGTAACAACTATCT s panTro5.chr21 3740223 18 + 33445071 ----------------ATAATGTAACAACTATCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17366033 18 + 46275980 ----------------ATAATGTAACAACTATCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3305449 18 - 13858734 ----------------ATAATGTAACAACTATCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4488552 18 + 32716333 ----------------ATAATGTAACAACTATCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155443679 18 - 185818997 ----------------ATAATGTAGCAACTATAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267974 18 - 192294377 ----------------ATAATGTAGCAACTATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748975 18 + 9440265 ----------------ATAATGTAGCAACTATAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478173 18 + 21915920 ----------------ATAATGTAGCAACTATAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052948 18 - 90373283 ----------------ATAATGTAGCAACTATAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237159 18 + 4234846 ----------------ATAATGTAGCAACTATAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 236317 18 - 13750039 ----------------ATAATGTAGCAACTATAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21952135 14 + 50472720 ----------------ATAATGTAACAAC----T i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053964 14 + 13128814 ----------------ATAATGTAACAAC----T i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9630741 14 - 14377064 ----------------ATAATGTAACAAC----T i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768773 14 + 9889416 ----------------ATAATGTAACAAC----T i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19221236 17 + 47401472 ----------------ATAATAATAAAATAATT- i micMur3.chr31 I 1 I 10 s otoGar3.GL873528 20771321 17 - 38779656 ----------------ATAATTAAAAAATGTTT- i otoGar3.GL873528 I 1 I 9 s mm10.chr16 78143879 18 + 98207768 ----------------ATAATAAAGTAACTACCT i mm10.chr16 I 7 I 1 s canFam3.chr31 13844560 18 + 39895921 ----------------ataataaaaCAAATATCT i canFam3.chr31 I 9 C 0 s dasNov3.JH568778 3647594 34 - 6883506 aataattgtaaaataattaatttGACAAATATCT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1116889 33 + 2694913 I a score=1091551.000000 s hg38.chr21_KI270874v1_alt 114629 80 + 166743 ATTTTATATCTGCTATGCTTGAAATACT-------GTGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTTGCTTTGTA-- s panTro5.chr21 3740241 80 + 33445071 ATTTTATATCTGCTATGCTTGAAATACT-------GTGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTTGCTTTGTA-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17366051 80 + 46275980 ATTTTATATCTGCTATGCTTGAAATACT-------GTGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTTGCTTTGTA-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3305467 80 - 13858734 ATTTTATATCTGCTATGCTTGAAATACT-------GTGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTTGCTTTGTA-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4488570 80 + 32716333 ATTTTGTATCTGCTATGCTTGAAACACT-------ATGTTA-TGTGCCCCAAGCTTAAAAAGTAGAAAGTCACAATTTTCGCTTTGTA-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155443697 80 - 185818997 ATTTTGTATCTGCTATGCTTGAAACACT-------GTGTTA-TGTGCCTCAAGCTTAAAAATTGGAAAGTCACAATTTTTGCTTTATA-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162267992 80 - 192294377 ATTTTGTATCTGCTATGCTTGAAACACT-------GTGTTG-TGTGCCTCAAGCTTAAAAATTGGAAAGTCACAATTTTTGCTTTATA-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8748993 80 + 9440265 ATTTTGTATCTGCTATGCTTGAAACACT-------GTGTTA-TGTGCCTCAAGCTTAAAAATTGGAAAGTCACAATTTTTGCTTTATA-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478191 80 + 21915920 ATTTTGTATCTGCTATGCTTGAAACACT-------GTGTTA-TGTGCCTCAAGCTTAAAAATTGGAAAGTCACAATTTTTGCTTTACA-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15052966 78 - 90373283 ATTTTATATCTGCTATGCTTGAAACAC---------TGTTA-TGTGCCTTAAGCTTAAAAATTGGAAAGTCGCAATTTTTGCTTTACA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237177 80 + 4234846 ATTTTGTATCTGCTATGCTTGAAACACT-------GTGTTA-TGTGCCTCAAGCTTAAAAATTGGAAAGTCACAATTTTTGCTTTATA-- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 236335 80 - 13750039 ATTTTGTACATGCTATGCTTGAAACACT-------GTGTTA-TATGCCTCAAGCTTAAAAATTGGAAAGTCACAATTTTTGCTTTACA-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21952149 78 + 50472720 ATTTTGTATCTGCTATGCTTGAAACACT-------ATGTTA-CATGCCCTATGCTTAAAAAGTGG--AGTCACAATGTTTGTTTTATA-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5053978 77 + 13128814 ATTTTGTATCTGCTATGCTTGAAACACT-------ATGTTA-TATGCCCCATGCTTAAAAAGTAG--AGTCACAATTTTTG-TGTATA-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9630755 78 - 14377064 ATTTTGTATCTGCTATGCTTGAAACACT-------ACGTTA-TGTGCCCCACGCTTAAAAAGTAG--AGTCACAATTTTTGTTTTACA-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768787 78 + 9889416 ATTTTGTATCTGCTATGCTTGAAACACT-------ATGTTA-TATGCCCCACGCTTAAAAAGTAG--AGTCACAACTTTTGTTTTATA-- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19221263 80 + 47401472 ATTTAATATCTGTTATGCTTAAGACACT-------ATGCTA-TGTGCCCCAGGCTTAAAAAATAGGAAGCCACAATTTTTACCTTATA-- i micMur3.chr31 I 10 C 0 s proCoq1.NW_012144079v1 1116922 80 + 2694913 ATTTAGTATTTGTTATGCTTAAGACACT-------ATGCTA-TGTGCCCCAGGCTTAAAGAATAGGAAGTCACAATTTTTACCTTATA-- i proCoq1.NW_012144079v1 I 33 C 0 s otoGar3.GL873528 20771347 80 - 38779656 AGTTAATATCTCTTGTGCTTAAGACACT-------ATGCCA-TGTGACCTAGGTTTAAAAACTAGGAAGTCACAATATTTGCCTTCTA-- i otoGar3.GL873528 I 9 C 0 s mm10.chr16 78143898 86 + 98207768 AACAGATATCTATT-TGTTCTTAGTATTTGACTTGACTTCA-GATTTCAAAAACTTTAAACAAAGGAAGAAATAAGCCTTGCTCTCTG-- i mm10.chr16 I 1 C 0 s canFam3.chr31 13844578 81 + 39895921 AGTGAGTATCTAGTAGGCTTAAAACACT-------ATCCTATTGTGCCCCAGACTTAAAAAGCAGAAAGTCATAATTCTTGCGATATA-- i canFam3.chr31 C 0 I 1505 s dasNov3.JH568778 3647628 77 - 6883506 ----ATTATCTCTTATGCTTAAGACACT-------ATGCTA-TGTGCC-CAGGCATAAAAAGCAGGAAGGCATAATTCTTAATATGAGTA i dasNov3.JH568778 C 0 C 0 a score=1336278.000000 s hg38.chr21_KI270874v1_alt 114709 108 + 166743 -------AGTTCTAAAT-CCTT------TGATGTGGAT--ACA------CAAGTA------------------------CACAA-----GTATACCTTACAATAGCACTTGAATTAAGTGTGGAAGGAGTCTTGAGACTGTGAAC--TAAAGCCGAGACAG s panTro5.chr21 3740321 108 + 33445071 -------AGTTCTAAAT-CCTT------TGATGTGGAT--ACA------CAAGTA------------------------CACAA-----GTATACCTTACAATAGCACTTGAATTAAGTGTGGAAGGAGTTTTGAGACTGTGAAC--TAAAGCCGAGACAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17366131 108 + 46275980 -------AGTTCTAAAT-CCTT------TGATGTGGAT--ACA------CAAGTA------------------------CACAA-----GTATACCTTACAATAGCACTTGAATTAAGTGTGGAAGGAGTTTTGAGACTGTGAAC--TAAAGCCGAGACAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3305547 108 - 13858734 -------AGTTCTAAAT-CCTT------TGATGTGGAT--ACA------CAAGTA------------------------CACAA-----GTATACCTTACAATAGTACTTGAATTAAGAGTGGAAGGAGTTTTGAGACTGTGAAC--TAAAGCCGAGATAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4488650 108 + 32716333 -------AGTTCTAAAT-CCTT------TGATGTGGAT--ACA------CAAGTA------------------------CACCA-----GTGTACCTTACAATAGCACTTGAATTAAGTGTGGAAGGAGTTTTGAGACTGTGAAC--TAAAGCCGAGATAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155443777 108 - 185818997 -------AGTTCTAAAT-CTTT------TGATGTGGAT--ACA------CAAGTA------------------------CCCAA-----GTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGAGTATTGAGATTGTGAAC--TAAAGCCGAGATAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162268072 108 - 192294377 -------AGTTCTAAAT-CTTT------TGATGTGGAT--ACA------CAAGTA------------------------CCCAA-----GTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGAGTATTCAGATTGTGAAC--TAAAGCCGAGATAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8749073 108 + 9440265 -------AGTTCTAAAT-CTTT------TGATGTGGAT--ACA------CAAGTA------------------------CCCAA-----GTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGAGTATTGAGATTGTGAAC--TAAAGCCGAGATAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478271 110 + 21915920 -------AGTTCTAAAT-CTTT------TGATGTGGATACACA------CAAGTA------------------------CCCAA-----GTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGAGTATTGAGATTGTGAAC--TAAAGCCGAGATAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15053044 107 - 90373283 -------AGTTCTAAAT-CTTT------TGATGT-GAT--ACA------CAAGTA------------------------CCCAA-----GTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGACTACTGAGATTGTGAAC--TAAAGACGAGATAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237257 108 + 4234846 -------AGTTCTAAAT-CTTT------TGATGTGGAT--ACA------CAAGTA------------------------CCCAA-----GTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGAGTATTGAGATTGTGAAC--TAAAGCCGAGATAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 236415 108 - 13750039 -------AGTTCTAAAT-CTCT------TGATGTGGAT--ACA------TAAGTA------------------------CCCAA-----GTATACCTTACAATAGCACTTGAACTAAGTGTGGAAGGAGCATTGAGATTGTGAAC--TAAAGCCGAGATAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21952227 108 + 50472720 -------GGTTCTAAAT-CTCT------TGATGTGGAT--ACA------CAGGTA------------------------CACAA-----GTATGACTTACAATAGCACTTGAATTAAGTGGGGAAGGAGTACCGAGGCTGTGAAC--TAAAGCCGAGAGAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5054055 108 + 13128814 -------GATTCTAAAT-CTCT------TGATGTGGAT--ACA------CAGGTA------------------------CACAA-----GTGTGCCTTATAATAGCACTTGAACCAAGTGGGGAAGGAGTATTGAGGCGGTGAAC--TAAAGCCGAGAGAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9630833 108 - 14377064 -------GATTCTAAAT-CTCT------TGATGTGGAT--ACA------CAGGTA------------------------CACAA-----GTATGCCTTACAATAGCACTTGAATTAAGTGGGGAAGGAGTATTGAGGCTGTGAAC--TAAAGCCGAGAGAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768865 108 + 9889416 -------GGTTCTAAAT-CTCT------TGATGTGGAT--ACA------CAGGTA------------------------CACAA-----GTATGCCTTACAGCAGCACTTGAATTAAGTGGGGAAGGAGTATTGAGGCTGTGAAC--TAAAGCCGAGAGAG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19221343 105 + 47401472 -------AATTCTAAAT-CTTC------TGATGTGGAT--AAA-----TCAAGTA------------------------CACAA-----GTAGACCTTATGAT-ACACTTGAATTAAGTGGCAAAGGAGTATTGAAG-TGTGAAC--TAAAGTAGTGAT-- i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1117002 107 + 2694913 -------AATTCTAAAT-CCTC------CGATGTGGAT--AAA-----TCAAGTA------------------------CACAA-----GTAGCCCTTACAAT-ACATTTGAATTAAGTGGCAAAGGAGTATTGAAA-TGTGAAC--TAAGGTAGTGATAG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20771427 108 - 38779656 -------AGTTCTAAAT-TCTC------CAATACAGAT--AAG-----TCAAGTA------------------------CACAA-----ATAGACCTTACAATAACACTTGAACAAAGTGGCAAAGGAGTATTGAAG-TGGGATC--TAGGGCAGTGATAG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78143984 104 + 98207768 -------GACTATAGATGCTCA------GGGTATGGGT--GCA------T-----------------------------TCTAA-----TTAGACCTCTCAATAGTTCTTGATCTAA--AATAGAGGCTCATTGAAGCTGTGAACTGTAAACTATTGACAG i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3647705 155 - 6883506 AATCAAGAATACCAAGT-AACTACAATATGTGGAGGAT--ATATCTCATCAAATATTTGCAAAGCAAAGGCTATAATCTCTCAAAAAGGACAGATCTTACAATGGCACTTGAACTAAAGTAGGACAGGGTATTGAGAATGTTTAC--TAAAGAGTGGCTG- i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13844659 1505 + 39895921 I a score=7306144.000000 s hg38.chr21_KI270874v1_alt 114817 468 + 166743 GC----AGAACTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCagagatgaaggactccaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgggtagc-------cagagcttt----------------ggagcgga---------gctgtagatctcggagttatttgcatgaagc-aat-aaaagctgctacaatcttaa-tggtgagaattggataaaaacaa-attgtgcatgggg---tggggtggtg-----gtatgaggatagaaatctggagcatttgggg-aagaagaaaaaaa--cgcaacaa-aaggaga--cagtaagggacataaatatgaaactagttgtcagagatacc s panTro5.chr21 3740429 468 + 33445071 GC----AGAACTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCagagatgaaggactccaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgggtagc-------cagagcttt----------------ggagcgga---------gctgtagatctcggagttatttgcatgaagc-aat-aaaagctgctacaatcttaa-tggtgagaattggataaaaacaa-attgtgcatgggg---tggggtggtg-----gtatgaagatagaaatctggagcatttgggg-aagaagaaaaaaa--cacaacaa-aaggaga--cagtaagggacataaatatgaaactagttatcagagatacc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17366239 468 + 46275980 GC----AGAACTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCagagatgaaggactccaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgggtagc-------cagagcttt----------------ggagcgga---------gctgtagatctcggagttatttgcatgaagc-aat-aaaagctgctacaatcttaa-tggtgagaattggatgaaaacaa-attgtgcatgggg---tggggtggtg-----gtatgaggatagaaatctggagcatttgggg-aagaagaaaaaaa--cacaacaa-aaggaga--cagtaagggacataaatatgaaactagttatcagagatacc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3305655 467 - 13858734 GC----AGAACTTAAAA-ATGGAAAGGAAGAA-GAGATATCTAATT---AGGCAGATATGAaggactccaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttattttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gtct------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgggtagc-------cagagcttt----------------ggagcgga---------gctgtagatctcggagttatttgcatgaagc-aat-aaaagctgctaaaatcttaa-tggtgagaattggataaaaacaa-attgtgcatgggg---tggggtggtg-----gtatgaggatagaaatctggagcatttgggg-aagaagaaaaaaa--cacaacaa-aaggaga--cagtaagggacataaatatgaaactagttgtcagaggtacc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4488758 468 + 32716333 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCAGAGCTGAaggactccaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatctggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgacaaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgcggaacatgcaaataatgatgtctagcaagcagttggaaatgtgtggc-------cagagcttt----------------ggggcgga---------gctgtagaactcggagttatttgcatgaagc-aat-aaaagctgctacaatcttaa-aggtgagaactggataaaaacaa-attgtgcatgggg---tggggtggtg-----ctatgaggatagaaatctggagcatttgggg-aagaagaaaaaaa--cacaacaa-aaagaga--cagtaagggacataaatacaaaactagttgtcagagatacc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155443885 467 - 185818997 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATACCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagagcttt----------------ggagcgga---------gctgtagaacttggagttatttgcatgaaat-aat-aaaagctgctacaatcttaa-tggtgagaattggataaaaacaa-tttgtgcatgggg---tagggtggtg-----gtatgaggacggaaatctggagtatttttgg-aagaag-aaaaaa--cacagcaa-aaggaga--cagtaagggacataaatacaaaactagttgtcagagatacc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162268180 467 - 192294377 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATACCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagagcttt----------------ggagcgga---------gctgtagaacttggagttatttgcatgaaat-aat-aaaagctgctacaatcttaa-tggtgagaattggataaaaacaa-tttgtgcatgggg---tagggtggtg-----gtatgaggacggaaatctggagtatttttgg-aagaag-aaaaaa--cacagcaa-aaggaga--tagtaagggacataaatacaaaactagttgtcagagatacc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8749181 467 + 9440265 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATACCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagagcttt----------------ggagcgga---------gctgtagaacttggagttatttgcatgaaat-aat-aaaagctgctacaatcttaa-tggtgagaattggataaaaacaa-tttgtgcatgggg---tagggtggtg-----gtatgaggacggaaatctggagtatttttgg-aagaag-aaaaaa--cacagcaa-aaggaga--cagtaagggatataaatacaaaactagttgtcagagatacc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478381 465 + 21915920 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATACCTAATT---AGGCAGAGCTGAAGGA--CTAACAAAaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagagcttt----------------ggagcgga---------gctgtagaacttggagttatttgcatgaaat-aat-aaaagctgctacaatcttaa-tgatgagaattggataaaaacaa-attgtgcatgggg---tggggtggtg-----gtatgaggacggaaatcaggagtatttttgg-aagaag-aaaaaa--cacagcaa-aatgaga--cagtaagggatataaatacaaaactagttgtcagagatacc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15053151 467 - 90373283 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagagcttt----------------ggagcgga---------gctgtagaactcggagttatttgcatgaaat-aat-aaaagctgctacaatcttaa-tggtgagaattggataaaaacaa-attgtgcatgggg---tggggtggtg-----gtatgaggacggaaatctggagtatttttgg-aagaag-gaaaaa--cacagcaa-aaggaga--cagtaagggatataaatacaaaactagttgtcagagatacc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237365 467 + 4234846 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATACCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagagcttt----------------ggagcgga---------gctgtagaacttggagttatttgcatgaaat-aat-aaaagctgctacaatcttaa-tgatgagaattggataaaaacaa-attgtgcatgggg---tggggtggtg-----gtatgaggacggaaatcaggagtatttttgg-aagaag-aaaaaa--cacagcaa-aatgaga--cagtaagggatataaatacaaaactagttgtcagagatacc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 236523 467 - 13750039 GC----AGAATTTAAAAGATGGAAAGGAAGAA-GAGATATCTAATT---AGGCAGAGCTGAaggactctaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagagcttt----------------ggagggga---------gctgtagaactcgcagttatttgcatgaaat-aat-aaaagctgctacaatcttaa-tggtgagaattggataaaaacaa-attgtacatgggg---tggggtggtg-----gtatgaggacagaaatctggagtattttggg-aagaaa-aaaaaa--cacagcaa-aaagaga--cagtaagggatataaatataaaactagttgtcagagatacc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21952335 474 + 50472720 GC----AG-ATTTAAAAGAT-GGAAGGAAGCA-GAGATATCTGATT---Agacagagataaagggctccaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattgggtatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------tgaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagctggaaatgtgtagc-------cggagattt----------------ggagcaga---------gctgtagaactgggagttatTTGAGTGAAAG-AAT-AAAAGCTGCTACAATCTTAAATAGTGAAAATTGGATAAAAACAAAATTTTGCATGGGG---TGGGGTGGGGTGGTTGTATGAGGACAGAAATCAGGAGTATTGGCGGAAAGAAGAAAAAAA---ACAGCAAGACGGAGA--CAGTAAAGGACATAAATACAAAACTAGTTGTCAGAGATACC i calJac3.chr21 C 0 I 8528 s saiBol1.JH378168 5054163 471 + 13128814 GC----AGAATTTAAAAGATGGGAAGGAAGCA-GAGATACCTAATT---Agacagagatgaagggctccaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttgtatttggcagaaattgggtatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------tgaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataacgatgtctagcaggcagttggaaatgtgtagc-------cggagcttt----------------ggagcaga---------gctgtagaaccgggagttatctgagtgaaag-aat-aaaaactgctacaatcttaagtagtgagaattggataaaaacaacattgtgcatgggg---tggggtggtg-----gtatgaagacagaaatcaggagtattagcggaaagaagaaaaaaa--cacagcaa-atggaga--cagtaaaggtcataaatacaaaaccagttgtcagagatacc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9630941 471 - 14377064 GC----AGAATTTAAAAGATGGGAAGGAAGCA-GAGATACCTAATT---Agacagagatgaagggctccaacaaaaccccata-tttctcaggctgagtcaatggaag-aaaagtgttatatttggcagaaattgggtatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------tgaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cggagcttt----------------ggagcgga---------gctgtagaaccgggagttatttgagtgaaag-aat-aaaatctgctacaatctgaagtagtgagaattggataaaaacaaaattgtgcatgggg---tggggtggtg-----gtatgaggacagaaatcaggagtattggtggaaagaagaaaaaaa--cacagcaa-acggaga--cagtaaaggacataaatacaaaaccagctgtcagagatact i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8768973 467 + 9889416 GC----AGAATTTAAAAGATGGGAAGGAAGCA-GAGATATCTAATT-------agagatgaagggctccaacaaaaccccata-tttctcaggctgagtcaatagaag-aaaagtgttatatttggcagaaattgggtatttaggaatagtgagttgttttgtggaggaaggtgataaatctgttttg---------cgaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtggaacatgcaaataatgatgtctagcaggctgttggaaatgtgtagc-------tggagcttt----------------ggagcaga---------gctgtagaactgggagttatttgagtgaaag-aat-aaaagctgctacaatcttaaatagtgagaattggatagaaacaaaattgtgcatgggg---tagggtggtg-----gtatgaggacagaaatcaggagtattggcggaaagaagaaaaaaa--cacagcaa-acggaga--cagtaaaggacataaatacaaaagtagttgtcagagatacc i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19221448 461 + 47401472 ------AGAATTAAAAAGAAGAGAAGGAAGAAGGAGATATCTAATT---Agacagagatggaggactccaacaaaactccata-tttttcaggctgagtcaatgggag-aaaagtgttatatttggcagaaattggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagtaac-tgtgcaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagcgcttt----------------aaagcaga---------gctgcagaactgggagtcatttgcatgaagc-aat-aaaagctgctacaatcttaaatggtgagaattggataaaaacaa-attgtgcat-------ggggagagtg-----gtatgaggatagaaatctagggtatcgtggg-aagaaaaaga-----cacagaga-aaggaaa--cagaaaaggacataaaaacaaaatgagtagctgtagatagc i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1117109 468 + 2694913 TC----AGAATTAAAAAGAAGGGAAAGAAGAAGGAGATATCTAATT---Agacagagatgaaggactccaacaaaactccata-tttttcaggctgagtcaatgggag-aaaagtgttatatttggcagaaactggatatttaggaataatgagttgttttgtggaggaaggtgataaatctgttttg---------agaaattttta---------------------------------------------------------------------gttt------------------------------------------------------aaagaaac-tgtgcaacatgcaaataatgatgtctagcaggcagttggaaatgtgtagc-------cagagcttt----------------gaagcaga---------gctgtggaactgggagtcatttgcatgaagc-aat-aaaagctgctacaatcttaaatggtgagaattggataaaaacaa-attgtgcat-------gaggggagtg-----gtatgaggatagaaatctcgggtatcgtggg-aagaagaaaaataagtaaagcaa-aaggaga--cagaaaaggacataaatacaaaatgagtagctgtagatagc i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20771535 578 - 38779656 GC----AGAATTAAAAAGATAGGAAGTCAAAAGGAAATATCTAATT---AGGCAGAGATGAAGGACCACAACAAAACTTCACA-TTCTTCAGGCTGAGTCAATGGAGG-AAATGTGTTGTATCTGGCAGAAATTGGATATTTAGGAATCATGAGTTATTTTGTGGAGGAAGGTGATAAATCTATTTTG---------AGAAATTTTTAAAGCAACTGTGCAgatggtgcctatggctgaaggagtcgagagccagccccatatactggaggtggtgggttcaaatctgacccgggccaaaaacttcaaaaaaaAAaaaaaaagaaagaaagaaagaaagaaaT-TGGGCAACATGCAAATAATAGTGTCTAGCAGGCAGTTGGAAAAGTGTAGC-------CAGAGCTCT----------------AC-----------------------------AGTCAGTTGCACAAAGC-CAT-AAAAGCTGCTATAATCTTAAACGATGAGAATTGGATAAAAACAA-TGTGTGCATAGAGTGAGAGGGGAGTG-----ATGTGAGGATAGAAATCTTGGGTATCATGGG-ATGAAGGAAAAGA--CACATCAA-AAAGAGACGCAGAGATACAGATACAAACAAAATGAGTGGTTGTAGATAGC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78144088 482 + 98207768 GCTGCAAGAATTCAAAACTTAGCAAGAAAG---GACATATTTAATTTTAAAACATGGGTG-------CCAAGCAAACTCTATA-TATTTTAAACAGAGTCAAAAGATGAAAAAGTGTTCTATTTGGCAGAAACTTGATGTTTAGAAATAATAAGCTCTTCTGTGGAGGAAGGTGATAAATCAGTTCTGAGAATTTTTAGAAGTTTTTA---------------------------------------------------------------------GTTG------------------------------------------------------AAAGGAACAAGTGGGACATGCAAATAGTGATGTCTAGCAGGAAGTTAAGAAGGTGTGGC-------TGGAGTCTCAGTGAGGGGGCAGGAGGGAGCAAA---------GCTGCAAAACT-GGAATCATTTGCACGAAGC-AGT-AAAAGCTGTTGTGACCATGAATGGTGAGAACTGGAGAGTAGCAA-ACTGTCCATGAGG---TGAGACAGTG--------TGGAGACAGACATGTGGAGAATAGCAGA-AAGAAG------A--CAGGGTGT-GGGGAGG--CAGCAAAGGGACAAGACATCAAATCGGTGGTTAGGAAGC-- i mm10.chr16 C 0 C 0 s canFam3.chr31 13846164 465 + 39895921 GC----AGAATT-AAGCAATGAGAAGGAAGAAGGAGCTGTCTGACT---AGACAGAGATGAAGGACTTCAATGAAACTTCGTA-TTTTTCAGGCTGAGTCAATGGGAG-AAAAGTAATAAAATTGGCAGAAATTGGAAATTTAGTAACAATGAGTTGTTTTGTAGAGAAGGGTGATAAAACTGGTTTG---------ACAAATTTTTC---------------------------------------------------------------------GTTT------------------------------------------------------ACAGAAAC-TGTAGAACATGCAAATAATGATGTCTAGCAGGCAGCTGGAAATGTGTAGC-------TAGAGCTTT----------------GTAGCAAAGGGCATAGGGCGGTGGAACTGGGAGTGATTTACATGAAAC-AATAAAAAGCTGCTATGATCTTGAATGGTGAGAATTAGATAAAAACAA-ATTGTGTATGGGG---------GATG-----ATACGAAGAAAGAAATTTAG-------TAAG-AAGAAGAAAAAGA--TACAGCAA-AGACAGA--CAGCAAAACG-GTAAACACAAAATTAGTATTCAGAAATAGC i canFam3.chr31 I 1505 C 0 s dasNov3.JH568778 3647860 441 - 6883506 GC----AGAATTAAGGAGATAAAAgagagaaa-gagata--tgatt---agacaaagatg---------aacacaactccacattttttcaggcttattcaatggtag--aaagtgttacatttggcagaaattgggagtttaagaataatgagttgtt-tgtggaggaaggtgataaatgtgattta---------agaaaaattta---------------------------------------------------------------------gttt------------------------------------------------------aa---gac-tgtaaaacatgcaaataatgatgtctagcagacagttggaaatgtgtagctttgaagcaaagtcag----------------agagcaga---------gctatagaaat--gagtCACT--CATGAAGCAAAT-AAAAGTTACTACAATCTTGAATAGCAAGAAAATGATCAAAACAC-ATTTTGCATGGGG----------GTG-----GTATGAGAACAAAAACTTTGGAAATTGTGGA-AAGAAGAACAAGT--CACAGCAA-AAGGTGA--CAGCAAAGGGAATAAAGACAAAGTTAACAAT---------- i dasNov3.JH568778 C 0 C 0 a score=141699.000000 s hg38.chr21_KI270874v1_alt 115285 20 + 166743 caaagagccaagataata-t----a s panTro5.chr21 3740897 21 + 33445071 caaagagccaagataata-t---ca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17366707 21 + 46275980 caaagagccaagataata-t---ca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306122 20 - 13858734 caaagagccaagataata-t----c i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489226 20 + 32716333 caaagagccaagataata-t----c i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444352 21 - 185818997 caaagagccaagataata-t---aa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162268647 22 - 192294377 caaagagccaagataatatt---aa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8749648 21 + 9440265 caaagagccaagataata-t---aa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478846 24 + 21915920 caaagagccaagataata-taaaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15053618 24 - 90373283 caaagagccaagatcata-taaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237832 20 + 4234846 caaagagccaagataata-t----a i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 236990 22 - 13750039 caaagagccaagataata-t--aaa i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5054634 20 + 13128814 caaagagccaagataata-t---c- i saiBol1.JH378168 C 0 I 2 s cebCap1.NW_016107322v1 9631412 20 - 14377064 caaagagccaagataata-t---c- i cebCap1.NW_016107322v1 C 0 I 8 s aotNan1.NW_018487195v1 8769440 20 + 9889416 caaagagccaagataata-t---c- i aotNan1.NW_018487195v1 C 0 I 1 s micMur3.chr31 19221909 17 + 47401472 caaagagccaagatatc-------- i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1117577 17 + 2694913 caaagagccaagatatc-------- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20772113 17 - 38779656 CAAGGAGCCAAGTTATC-------- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78144570 20 + 98207768 CAAGAAAGCAAGGGAATGTT----- i mm10.chr16 C 0 C 0 s canFam3.chr31 13846629 20 + 39895921 CAGAGAGCCAAGATAATACC----- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3648301 17 - 6883506 CAAAGAACCAAGATATA-------- i dasNov3.JH568778 C 0 C 0 e calJac3.chr21 21952809 8528 + 50472720 I a score=652049.000000 s hg38.chr21_KI270874v1_alt 115305 46 + 166743 aaaaaaaaatcagaagag-aaaaaattt------------------tcattaagaacagtgtgat s panTro5.chr21 3740918 46 + 33445071 aaaaaaaaatcagaagag-aaaaaattt------------------tcattaagaacagtgtgat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17366728 46 + 46275980 aaaaaaaaatcagaagag-aaaaaattt------------------tcattaagaacagtgtgat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306142 46 - 13858734 aaaaaaaaatcagaagag-aaaaaattt------------------tcattaagaacagtgtgat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489246 46 + 32716333 aaaacaaaatcagaagag-aaaaaattt------------------tcattaagaacagtgtgat i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444373 46 - 185818997 aaaaaaaaatcagaagag-aaaaaattt------------------tcattaagaatggtgtgat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162268669 46 - 192294377 aaaaaaaaatcagaagag-aaaaaattt------------------tcattaagaatggtgtgat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8749669 46 + 9440265 aaaaaaaaatcagaagag-aaaaaattt------------------tcattaagaatggtgtgat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478870 46 + 21915920 aaaaaaaaatcagaagag-gaaaaattt------------------tcattaagaatggtgtgat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15053642 46 - 90373283 aaaaaaaaatcagaagag-aaaaaaatt------------------tcattaagaatggtgtgat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237852 46 + 4234846 aaaaaaaaatcagaagag-aaaaaattt------------------tcattaagaatggtgtgat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237012 46 - 13750039 aaaaaaaaatcagaagac-aaaaaattt------------------tcattaagaatggtgtgat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961337 41 + 50472720 aataaaaaattaaaaaaaaaaAAAAA------------------------AAAGAACAGTGTGAT i calJac3.chr21 I 8528 C 0 s saiBol1.JH378168 5054656 47 + 13128814 aaaaaaaaatcagaagagaaaaaaaatt------------------tcgttaagaacagtgtgat i saiBol1.JH378168 I 2 C 0 s cebCap1.NW_016107322v1 9631440 47 - 14377064 aaaaaaaaatcagaagggaaaaaaattt------------------tcattaagaacagtgtgat i cebCap1.NW_016107322v1 I 8 C 0 s aotNan1.NW_018487195v1 8769461 47 + 9889416 aaaaaaaaatcagaagagaaaaaaattt------------------tcattaagaacagtgttat i aotNan1.NW_018487195v1 I 1 C 0 s micMur3.chr31 19221926 44 + 47401472 --aaagaaatcagatgag-aaaaaattt------------------tccttaagagcaatgtgat i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1117594 44 + 2694913 --aaagaaatcagaagag-aaaaaattt------------------tcattaagagcaatgtgat i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20772130 42 - 38779656 --AAAGAGATCAGAAGAA-AAAAAA--T------------------TCATTAAGAACAATGTGAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78144590 62 + 98207768 --AAAGACATCAGAAAGC-GAAATCATTAAGATTGTGATGATCCCATCAAaaaggacaaagtggt i mm10.chr16 C 0 C 0 s canFam3.chr31 13846649 44 + 39895921 --AAAAAAATCAGAAGAG-AAAAAGTTC------------------TCATTATGAATAGTGAGAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3648318 45 - 6883506 CCAAACAAATCAGAA-AG-GAATTTTTT------------------TCGTTAAGAATACTGTGAT i dasNov3.JH568778 C 0 I 1932 a score=3941486.000000 s hg38.chr21_KI270874v1_alt 115351 295 + 166743 caa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTCAATCTTGGGA-ATATAGCG--T-ATGTTACTCTTAATGAGAGCTA-------CCAATATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGGCAGGGATT-TGCAGGTGTCCCCAGAG-GTGATGACTCCCTTCATCATTGTAATTACACACCCTTTTCTTAC s panTro5.chr21 3740964 295 + 33445071 caa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTCAATCTTGGGA-ATATAGCG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGGCAGGGATT-TGCAGGTGTCCCCAGAG-GTGATGACTCCCTTCATCATTGTAATTACACACCCTTTTCTTAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17366774 295 + 46275980 caa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTCAATCTTGGGA-ATATAGCG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTTTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGGCAGGGATT-TGCAGGTGTCCCCAGAG-GTGATGACTCCCTTCATCATTGTAATTACACACCCTTTTCTTAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306188 295 - 13858734 caa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTCAATCCTGGGA-ATATAGCG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGGCAGGGATT-TGCAGGTGTCCCCAGAG-GTGATGACTCCCTTCATCATTGTAATTACACACCCTTTTCGTAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489292 288 + 32716333 caa-------------------------------------------------------ctctgtcaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTT---CTAAATCACTCAGT------------------------------ATTGTT-ATCTTGGGA-ATCTAGCG--T-ATGTTACTC-----GAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGGCAGGGATT-TGCAGGTG-CCCCAGAG-GTGATGACTCCCTTCGTCATTGTAATTACACAACCTTTTCTTAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444419 295 - 185818997 caa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGTTAGGGATT-TGCAGGTGTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACACATCCCTTTCTTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162268715 295 - 192294377 caa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGTTAGGGATT-TGCAGGTGTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACACATCCCTTTCTTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8749715 295 + 9440265 caa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACACAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGTTAGGGATT-TGCAGGTGTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACACATCCCTTTCTTAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8478916 295 + 21915920 caa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGTTAGGGATT-TGCAGGTGTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACACATCCCTTTCTTAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15053688 295 - 90373283 caa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTCTGGAAATAAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGCAGTCAGGGATT-TGCAGGTGTCCCCAGAG-ATGATGACTCTCTTCGTCATCGTAATTACACATCCCTTTCTTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2237898 295 + 4234846 caa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTTTGGAAATAAATCGTTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGA-ATATAATG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGTTAGGGATT-TGCAGGTGTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACACATCCCTTTCTTAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237058 295 - 13750039 caa-------------------------------------------------------ctctgttaaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---CTAAATCACTCACT------------------------------ATTGTTAATCTTGGGA-ATATAACG--T-ATGTTACTCTTAATGAGAGCTA-------CCAACATT--------------------------------------AATTACTTTTCAAATTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGGATTTGTCTGAGTTGA--GCTTCTCCTTTAGTAGTCAGGGATT-TGTAGGTTTCCCCAGAG-ATGATGACTCCCTTCGTCATCGTAATTACACATCCCTTTCTTAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961378 289 + 50472720 CAA-------------------------------------------------------CTCTGATAAATGCC-----------------ACAGAGATTTTGGAAATAAATCATTTC---TAAAATCACTCAGT------------------------------ATTATTAATCTTGGGA-ATATAAC-----ATGTTACGCTTAATAAGAGCTA-------CCAACAT------------------------------------------GACTTTTCGAACTAATAATTATATTTTAATACTCTCTTCAAGTTTAAGACAGAAACATACACATAAAAAT-----GTATCTGCATTTGTCTAAATTGA--GCTTCTCCTTTAGTAAGCAGAAATT-TGCAGGTGTCCCCAGAG-GTGATGACTCCCTTTGTCATCGTAATTACACACCCCTTTCTTAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5054703 289 + 13128814 caa-------------------------------------------------------ctctgataaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---TAAAATCACTCAGT------------------------------ATTATTAATCTTGGGA-ATATAACA--T-ATGTTACACTTAATAAGAGCTA-------CCAACAT--------------------------------------------TTTTTCAAACTAATAATTATATTTTAATACTCTCTTCAAGTTTAAGAAAGACACATACACATAAAAAT-----GTATCTGCATTTGTCTGAATTAA--GCTACTCCTTTAGTAGGCAGAAATT-TGCAGGTGTCCCCAGAG-GTGATGACTCCCTTTGTCATCGTAATTACACACCCCTTTCTTAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9631487 291 - 14377064 caa-------------------------------------------------------ctctgataaatgcc-----------------acagaGATTTTGGAAATAAATCATTTC---TAAAATCACTCAGT------------------------------ATTATTAATCTTGGGA-ATATAACA--T-ATGTTACACTTAATAAGAGCTA-------CCAACAT------------------------------------------TACTTTTCAAACTAATAATTATATTTTAATACTCTCTTCAAGTTTAAGAAAGACACATACACATAAAAAT-----GTATCTGCATTTGTCTGAATTAA--GCTTCTCCTTTAGTAGGCAGAAATT-TGCAGGTGTCCCCAGAG-GTGATGACTGCCTTTGTCATCATAATTACACACCCCTTTCTTAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8769508 291 + 9889416 caa-------------------------------------------------------ctctgataaatgcc-----------------acagagatttcggaaataagTCATTTC---TAAAATCACTCAGT------------------------------ATTATTAATCTTGGGA-ATATAACA--T-ATGTTATGCTTAATAAGAGCTA-------CCAACAT------------------------------------------TACTTTTCAAACTAATAATTATATTTTAATACTCTCTTCAAGTTTAAGAAAGAAACATACACATAAAAAT-----GTATCTGCATTTGTCTGAATTGA--GCTTCTCCTTTAGTAGGCAGAAATT-TGTAGGTGTCCCCAGAG-GTGATGACTCCCTTTGTCATCGTAATTACACACCCCTTTCTTAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19221970 297 + 47401472 caa-------------------------------------------------------ctctgtcaaatgcC-----------------ATGGAGATTTTGGAAATAAATAATTTC---CTAATTCACTGAGT------------------------------ATTATTAATCTTGGAA---ACAGAG--T-ATGTTACTCCTAATAGGAGTTA-------GCAGCATT--------------------------------------AATTAGTTTTTAAACTAATAATTATATTTTAATTCTCTCTTCAAGTTTAAAAAAGGAACATACACATAAAAGTAATCAGTCTCTGAACTTGTCTGAGTTGA--ATTTCTCCTCTACTAGGGAAGGATT-CACAGATGT-CCCAGAG-GTGATGCCTCCTTTTATCATCATAATTACACACCCTTTTCTTAC i micMur3.chr31 C 0 I 34 s proCoq1.NW_012144079v1 1117638 267 + 2694913 caa-------------------------------------------------------ctctgtcaaatgcc-----------------acggaGATTTTGGAAA-AAATCATTTC---CTAAATCACTCAGT------------------------------ATTGTTAATCTTGGGG-CTATAGAG--T-ATGTTACTCCTAGCAGGAGCTA-------CCAGCATT--------------------------------------CATTAGTTTTCAAACTAATAATTATTT------------------------------ACATACACATAAAAATAATCAGTCTCTGAACTTGTCTGAGTTGA--ATTTCTCCTCTACTAGGGAAGGATT-CACAGATGT-CCCAGAG-GTGATGCCTCC-TTTGTCATCATGATTACACACCCTTTTCTTAC i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20772172 291 - 38779656 CGA-------------------------------------------------------TTCTGTCAAACACC-----------------GCGAAGATTTAGAAAT-AAATCACTTC---CTAAATGACTCAGT------------------------------ATTGTTGATCTTGAGA-ATAAAGAG--TAATGCTACTCCTAATAAGAGCTATTTAATGGCAGCATT--------------------------------------AATTCATTTTCaaattaataattatattttaattttCTCTTCAAGTTTTAAAAAGGAACATACCCCTAAAAACAGTGAGTCTCTGAATTTATCTGGGTTGA--ATTTTTCCTCTGCGAGGCAGGGATG----ACATGTCCCCAGAG-AAGATGCCTCCTTTTGTCAT-------------CCTCTTCTTAC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78144652 429 + 98207768 caaaaaggacaaagtggcagcttatagaatggggaaccattcccttcaccaaccttacctctgacaaaagactgatatccaaaatatataaagaactcaagaaactagatagcaacaaaccaaatagcccaattaaagaatggggtacagagctaaacagagaattctcaacagtggaacctttaatggcc-aagaagcacttaatga-aatga-------tcaacatccttagtcatcagggaagtgcaaatcaaaatgactctgagattcctcctcacaccaatcagaatagctaagctct------aaacctcaggagataccatatgctggcga-------ggatgtggac------aaggagaatactcctccgttactATTTCCCGTCTATGACGATGGCTCTGGAATAGGAAGACTCCTTTC-TTGCTGCAGTAGAATATGGTTTTTGAAC i mm10.chr16 C 0 I 7 s canFam3.chr31 13846693 291 + 39895921 CAA-------------------------------------------------------CTCTGTCAAATGCC-----------------ACAGAGATTTTGGAAATAAATCATTTC---CAAAATCACTCAGT------------------------------ATTATTAATCTTGGGA-ATACAGAG--C-ATGTTATGCCTAATAAGAGCCA-------CCAGTATT--------------------------------------AATTAATTTTCAAACTAATAATTATATCTTAATCCTCTCTTCAAATTTGAGA-GGTAACATACTTATAAGAATGAT--GTCTTTGAACTTGTCTGAGTTGA--GTTTCTCCTTTA-----CAAGGAGT-TGCAGGTATTTCCAGAG-GTG-TGCCTCCTTTTACCATCAGAATTACACACGGTTTCCTAGT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3648363 1932 - 6883506 I a score=466049.000000 s hg38.chr21_KI270874v1_alt 115646 39 + 166743 CATCATTTCCAA-GTACAT-GTCACTGGTCTCGGAGCAGGA s panTro5.chr21 3741259 39 + 33445071 CATCATTTCCAA-GTACAC-GTCACTGGTCTCGGAGCAGGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367069 39 + 46275980 CATCATTTCCAA-GTACAC-GTCACTGGTCTCGGAGCAGGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306483 39 - 13858734 CATCATTTCCAA-GTACAT-GTCACTGGTCTCGGAGCAGGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489580 39 + 32716333 CATCATTTCCAA-GTACAT-GTCACTGGTCTCGGAGCAGGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444714 39 - 185818997 CATCATTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269010 39 - 192294377 CATCATTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750010 39 + 9440265 CATCATTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479211 39 + 21915920 CATCATTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15053983 39 - 90373283 CATCATTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238193 39 + 4234846 CATCATTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237353 39 - 13750039 CATCATTTCCAA-GTACAT-GTCACTGGTCTCAGAGCAGGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961667 40 + 50472720 CATCATTTCCAA-GTATATGGTCACTGGTCTTGGAGCAGGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5054992 40 + 13128814 CATCATTTCCAA-GTATATGGTCACTGGTCTTGGAGCAGGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9631778 40 - 14377064 CATCATTTCCAC-GTATATGGTCACTGGTCTTGGAGCAGGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8769799 40 + 9889416 CACCATTTCCAA-GTATATGGTCACTGGTCTCGGAGCAGGA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1117905 34 + 2694913 CTTTGTTTCCAA-GTAGAT-GT-AATGGTCTCAGAGG---- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20772463 33 - 38779656 AGTTGCCTCCAA-GTACAT-GTCAGTGGTCTCAGG------ i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145088 38 + 98207768 CTCTGTTTCCAGTGCACAT-TTCAC--ACCTTGAAAGCAGA i mm10.chr16 I 7 I 19 s canFam3.chr31 13846984 36 + 39895921 CATCATTTCCAA-ACAGAT-GTCACTGGTCTCAGAATA--- i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3648363 1932 - 6883506 I e micMur3.chr31 19222267 34 + 47401472 I a score=534757.000000 s hg38.chr21_KI270874v1_alt 115685 44 + 166743 AGGCTCCTTCTCCCAATTCAGTGTCTGT-------------------CAGAAGTCTTC-------------------CCTGT s panTro5.chr21 3741298 44 + 33445071 AGGCTCCTTCTCCCAATTCAGTGTCTGT-------------------CAGAAGTCTTC-------------------CCTGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367108 44 + 46275980 AGGCTCCTTCTCCCAATTCAGTGTCTGT-------------------CAGAAGTCTTC-------------------CCTGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306522 44 - 13858734 AGGCTCCTTCTCCCAATTCAGTGTCTGT-------------------CAGAAGTCTTC-------------------CCTGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489619 44 + 32716333 AGGCTCCTTCTCCCAGTTCAGGGTCTGT-------------------CAGAAGTCTTC-------------------CCTGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444753 44 - 185818997 AGGCTGCTTCTCCCAATTCACTATCTGT-------------------CGGAAGTCTTC-------------------CCTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269049 44 - 192294377 AGGCTGCTTCTCCCAATTCACTATCTGT-------------------CGGAAGTCTTC-------------------CCTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750049 44 + 9440265 AGGCTGCTTCTCCCAATTCACTATCTGT-------------------CGGAAGTCTTC-------------------CCTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479250 44 + 21915920 AGGCTGCTTCTCCCAATTCACTGTCTGT-------------------CGGAAGTCTTC-------------------CCTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054022 44 - 90373283 AGGCTGCTTCTCCCAATTCAGTGTCTGT-------------------CGGAAGTCTTC-------------------CCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238232 44 + 4234846 AGGCTGCTTCTCCCAATTCACTGTCTGT-------------------CGGAAGTCTTC-------------------CCTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237392 44 - 13750039 AGGCTCCTTCTCCCAATTCAGTGTCTGT-------------------CGGAAGTCTTC-------------------CCTGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961707 42 + 50472720 CAGCTCCTTCTCCCAATTCAGT-TCTGT-------------------CGGAAG-TTTC-------------------CCTGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055032 40 + 13128814 AGGCTCCTTCTTCCATTTCAGT-TCTGT-------------------CAGA---TTCC-------------------CCTGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9631818 43 - 14377064 AGGCTCCTTCTCCCAGTTCAGT-TCTGT-------------------CGGAAGTTTCC-------------------CCTGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8769839 43 + 9889416 AGGCTCCTTCTCCCAATTCAGT-TCTGT-------------------CGGAAGTTTTC-------------------CCTGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19222301 44 + 47401472 AGGCTCCTTCTCCTAATTCAGTGTCAGC-------------------TGAAAGTCTTC-------------------CCTGT i micMur3.chr31 I 34 I 267 s proCoq1.NW_012144079v1 1117939 44 + 2694913 AGGCTCCTTCTCCTAATTCAGCGTCAGC-------------------TGAAAGTCTTC-------------------CCTGT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20772496 44 - 38779656 AGACTCCTCCTCCCAAGTCAGTGTCGGC-------------------TGAAAGTCTTC-------------------CCCGA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145145 82 + 98207768 TAGTCCATTGTCCCTATCCAGTTTCTTTATTCTAAGACACAAAAACGTGGAAGCCCTCTAAGGATGCCCTTGGAACTCCAGT i mm10.chr16 I 19 I 4 s canFam3.chr31 13847020 37 + 39895921 AGCCTCCTTCTCTT-------TGTCCAC-------------------TAGAGCTCTGC-------------------TCTAT i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3648363 1932 - 6883506 I a score=1672434.000000 s hg38.chr21_KI270874v1_alt 115729 157 + 166743 TCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGAGagccagacttagccagact--tagccagacttGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAA s panTro5.chr21 3741342 147 + 33445071 TCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGA----------CAGCCAGACT--TAGCCAGACTTGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367152 147 + 46275980 TCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGA----------CAGCCAGACT--TAGCCAGACTTGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306566 147 - 13858734 TCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGA----------GAGCCAGACT--TAGCCAGACTTGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489663 147 + 32716333 TCATCAGATTTAGTCACTCAA-------TGCCGCCTAACAGTTGGAG---AAAACATTGA----------GAGCCAGACT--TAGCCAGATTTGTGGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTAACTGAAAAAGAAAATAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444797 147 - 185818997 TCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269093 147 - 192294377 TCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750093 147 + 9440265 TCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479294 147 + 21915920 TCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGAAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054066 147 - 90373283 TCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238276 147 + 4234846 TCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCAGGCCACAGCTGCTAAGGTTCTGA-AAAGCGTT-GCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237436 147 - 13750039 TCATTAGATTTAGTCACTCAA-------TGCTGCCTAACAGTGGGAG---AAAACATTGA----------GAGCCAGACT--TAGCAGGACTTGCCGGCCACAGCTGCTAAGGTTCCGA-AAAGCATT-GCACTGAAAATTAAAACCCACTCACTGAAAAAGAAAATAAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961749 137 + 50472720 TCACCAGATTTAGTCACTCAA-------TTCTGCCTAACAGTTGGAG---AAAACACTGA----------GAGCCA------------GATTTGTGGGCCAAAGCTTCTAAGGTTCTCA-AAAGCATT-GCACTGAAAATTAAAATCCACTAACttaaaaagaaaataaaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055072 137 + 13128814 TCCCCAGATTTAGTCACTCAA-------TTCTGCGTAACAGTTGGAG---AAAACATTGA----------GAGCCA------------GATTTGTGGGCCAAAGCTGCTAAGGTTCTGA-AAAGCATT-GCACCGAAAATTAAAATCCACTAACTTAAAAATAAAATAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9631861 137 - 14377064 TCACCAGATTTAGTCACTCAA-------TTCTGCCTAACAGTTGGAG---AAAACATTGA----------GAGCCA------------GATTTGTGGGCCAAAGCTGCTAAGGTTCTGA-AAAGCATT-GCACCGAAAATTAAAATCCACTAACTTAAAAAGAAAATAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8769882 137 + 9889416 TCACCAGATTTAGTCACTCAA-------TTCTGCCTAACAGTTGGAG---AAAACATTGA----------GAGCCA------------GATTTGTGGGCCAAAGCTGCTAAGGTTCTGA-AAAGCATT-GCACTGAAAATTAAAATCCACTAACTTTAAAAGAAAATAAAA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1117983 131 + 2694913 TTGTCAGCTTTCGATACTCGG-------TGCCCCGAAGCAATTAGAG---AAAGGGTTGA----------GAGCCA------------GGG------GTCATAGCTGCTAAGGTTCTTA-GGAGCATTTGCACTGAAAACTCAAATTAACTAAATC-AAAAGAACATAAAA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20772540 138 - 38779656 TTGTCAGCTTGAGTCACTCCA-------TGCCCCAGACCACTTGGAG---AAAAGGTTGA----------GAACCA------------GGGTCATGAGTCACAGCTGCTAATGTTCTAA-GGAGCATTGGCACTGAAAATTGAGATTAACTAAACAGAAAAGAATATAAAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145231 155 + 98207768 CCATAGTACTTTGACTTCCAGACAACTTTCCTGTTCAGCATTTGCAGCTCAGAACAGTTA----------AACGAAGATTGCTAACA-GAATTGTGGTCCACAGCTGCTACAGTTCTGA-GGAACATTTGCACTTAACTTT----CTAGCCAACTAGAAAAATGGGTAAAA i mm10.chr16 I 4 C 0 s canFam3.chr31 13847057 132 + 39895921 TCTTCATCTTTACTCACTTAA-------TGCCTCAGAAC---TGGAG---AAAGAGTTAA----------GAGCCA------------GAGTTGTGGGTCATAGCTGCTAATGTTCTGAGGAAGCATTTGCACTGAACATTCCAATCTACTAG----AAAAGAAAATAAGA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3648363 1932 - 6883506 I e micMur3.chr31 19222345 267 + 47401472 I a score=248475.000000 s hg38.chr21_KI270874v1_alt 115886 19 + 166743 ATTCACAGAAATTAGTTTC s panTro5.chr21 3741489 19 + 33445071 ATTCACAGGAACTAGTTTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367299 19 + 46275980 ATTCACAGGAATTAGTTTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306713 19 - 13858734 ATTCACAGAAATTAGTTTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489810 19 + 32716333 ATTCATAGAAATTAGTTTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444944 19 - 185818997 ATTCATAGAAATTAGTTTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269240 19 - 192294377 ATTCATAGAAATTAGTTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750240 19 + 9440265 ATTCATAGAAATTAGTTTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479441 19 + 21915920 ATTCATAGAAATTAGTTTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054213 19 - 90373283 ATTCATAGAAATTAGTTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238423 19 + 4234846 ATTCATAGAAATTAGTTTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237583 19 - 13750039 ATTCATAGAAATTAGTTTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961886 19 + 50472720 aattataaaaatGAGTTTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055209 19 + 13128814 AATCCTAGAAATCAGTTTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9631998 19 - 14377064 AATCATAGAAATGAGTTTC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770019 19 + 9889416 AATCATAGAAATTAGTTTC i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1118114 19 + 2694913 ATTTATAGAAATGAGTTTC i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20772678 19 - 38779656 ATTCATAGAAATGAGTTTC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145386 18 + 98207768 ATCCA-AGCCACATGTTCC i mm10.chr16 C 0 C 0 s canFam3.chr31 13847189 19 + 39895921 TTCAAAGGGAATAAGTTTC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3650295 19 - 6883506 ATATATAAGAATGAGTTTC i dasNov3.JH568778 I 1932 C 0 e micMur3.chr31 19222345 267 + 47401472 I a score=576604.000000 s hg38.chr21_KI270874v1_alt 115905 35 + 166743 TAAAGATCATGGCACTTGGTTGAGGAGATATTTAG s panTro5.chr21 3741508 35 + 33445071 TAAAGATCATGGCACTTGGTTGAGGAGATATTTAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367318 35 + 46275980 TAAAGATCATGGCACTTGGTTGAGGAGATATTTAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306732 35 - 13858734 TAAAGATCATGGCACTTGGTTGAGGAGATATTTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489829 35 + 32716333 TAAAGATCAGAGCACTTGGCTGAGGAGATATTTAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444963 35 - 185818997 TAAAGATCATGGCACTTGGTTGAGGAGACATTTAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269259 35 - 192294377 TAAAGATCATGGCACTTGGTTGAGGAGACATTTAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750259 35 + 9440265 TAAAGATCATGGCACTTGGTTGAGGAGACATTTAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479460 35 + 21915920 TAAAGATCATGGCACTTGGTTGAGGAGACATTTAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054232 35 - 90373283 TAAAGATCATGGCACTTGGTTGAGGAGACATTTAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238442 35 + 4234846 TAAAGATCATGGCACTTGGTTGAGGAGACATTTAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237602 35 - 13750039 TAAAGATCATGGCACTTGGTTGGGGAGACATTTAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961905 35 + 50472720 TAAAGCTCATGGCACTTGGTTGAGGAGATATTTAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055228 35 + 13128814 TAAAGCTCATGGCACTTGGTTGAGGAGATATTTAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632017 35 - 14377064 TAAAACTCATGGCACTTGGTTGAGGAGATATTTAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770038 35 + 9889416 TAAAGCTCATGGCACTTGGTTTAGGAGATATTTAG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19222612 35 + 47401472 TAAAGATCATGGCACTTGGTTGAGCAGATATTTAG i micMur3.chr31 I 267 I 103 s proCoq1.NW_012144079v1 1118133 35 + 2694913 TAAAGATCATGGCACTTGGTTGAGCAGATATTTAG i proCoq1.NW_012144079v1 C 0 I 119 s otoGar3.GL873528 20772697 32 - 38779656 TAAATATCATAGCACTTCATTGAGC---TATTTAG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145404 35 + 98207768 TAATGGCCACGACACTCAGTTGAGAATATACTTAG i mm10.chr16 C 0 I 5 s canFam3.chr31 13847208 31 + 39895921 AAAAGATCATGAC----GTTTGAAGAGATACAGGG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3650314 35 - 6883506 TAGAGATCATAATACTTTCTTGAGGAGATATTTAG i dasNov3.JH568778 C 0 I 2 a score=358157.000000 s hg38.chr21_KI270874v1_alt 115940 32 + 166743 AG--AATCGACCCTTAAA-----------ATAACACCACGTAAAC s panTro5.chr21 3741543 32 + 33445071 AG--AACCGACCCTTAAA-----------ATAACACCACGTAAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367353 32 + 46275980 AG--AATCGACCCTTAAA-----------ATAACACCACGTAAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306767 32 - 13858734 AG--AATCGATCCTTAAA-----------ATAACACCATGTAAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489864 34 + 32716333 AGAAAATCGACCCTTAAA-----------ATAACACCATGTAAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155444998 34 - 185818997 AGAAAATCAACCCTTAAA-----------ATAACACCATGTAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269294 34 - 192294377 AGAAAATCAACCCTTAAA-----------ATAACACCATGTAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750294 34 + 9440265 AGAAAATCAACCCTTAAA-----------ATAACACCATGTAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479495 34 + 21915920 AGAAAATCAACCCTTAAA-----------ATAACACCATGTAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054267 34 - 90373283 AGAAAATCGACCCTTAAA-----------ATAACACCATGTAAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238477 34 + 4234846 AGAAAATCAACCCTTAAA-----------ATAACACCATGTAAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237637 34 - 13750039 AGAAAATCGACCCTTAAA-----------ATTACACCATGTAAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961940 34 + 50472720 AGAAAACTGACCCTTAAA-----------ATAACACCATGTAAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055263 34 + 13128814 AGAAAATTGACCCTTAAA-----------ATAACACCATGTAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632052 34 - 14377064 AGAAAATTGACCCTTAAA-----------ATAACACCATATAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770073 34 + 9889416 AGAAAATTGACCCTTAAA-----------ATAACACCATGTAAAA i aotNan1.NW_018487195v1 C 0 I 305 s otoGar3.GL873528 20772729 44 - 38779656 GGAAAAGCACCCCTAAAAATGATCTAAATATAATAACATCTAAA- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145444 29 + 98207768 --AAAATCGCTCCTCAAA-----------ATAACTC---GTAGGA i mm10.chr16 I 5 C 0 s canFam3.chr31 13847239 28 + 39895921 --AGAAGCATCCCTTATA---------------TAGCATGTAGAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3650351 32 - 6883506 --AGAAGCACCCTTTAAA-----------ATAACTCCATTTAGGC i dasNov3.JH568778 I 2 C 0 e proCoq1.NW_012144079v1 1118168 119 + 2694913 I e micMur3.chr31 19222647 103 + 47401472 I a score=780433.000000 s hg38.chr21_KI270874v1_alt 115972 63 + 166743 AAGTTCTAATTTAACATATCCCAAGAGTGACATTGTACTTGAACA----AGTT--TGACTAAGATTATT s panTro5.chr21 3741575 63 + 33445071 AAGTTCTAATTTAACATATCCCAAGAGTGACATTGTACTTGAACA----AGTT--TGACTAAGATTATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367385 63 + 46275980 AAGTTCTAATTTAACATATCCCAAGAGTGACATTGTACTTGAACA----AGTT--TGACTAAGATTATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306799 63 - 13858734 AAGTTCTAATTTAACGTATCCCAAGAGTGACATTGTACTTGAACA----AGTT--TGACTAAGATTATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489898 63 + 32716333 AAGTTCTAATTTAACATATCCCAAGAGTGACACTGTAGTTGAACA----AGTT--TGATTAAGATTATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445032 63 - 185818997 AAGTGCTAAGTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AGTT--TAATTAAGATTATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269328 63 - 192294377 AAGTGCTAAGTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AGTT--TAATTAAGATTATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750328 63 + 9440265 AAGTGCTAAGTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AGTT--TAATTAAGATTATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479529 63 + 21915920 AAGTGCTAATTTAACATATCCCAAGAGTGACATTGTAACTGAACA----AGTT--TAATTAAGATTATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054301 63 - 90373283 AAGTGCTAATTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AGTT--TAATTAAGATTATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238511 63 + 4234846 AAGTGCTAATTTAACATATCTCAAGAGTGGCATTGTAATTGAACA----AGTT--TAATTAAGATTATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237671 63 - 13750039 AAGTTCTAATTTAACATATCCCAAGAGTGACATTGTAATTGAACA----AATT--TAATTAAGATTTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21961974 63 + 50472720 CAGTTCTAATTTAACATATCCCAAGCCTGACATTGTAATTGAACA----AGTT--TGATTAAGATTATT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055297 63 + 13128814 AAGTTCTAATTTAAAATATCCCAAGACTGACACTGTAATTGAACA----AGTT--TGATTAAGATTATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632086 63 - 14377064 AAGTTCTAATTTAACATATCCCAAGACTGACATTGTAATTGAACA----AGTT--TGATTAAGATTATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770412 63 + 9889416 aaGTTCTAATTTAACATATCCCAAGACTGACATTGCAATTGAACA----AGTT--TGATTAAGACTATT i aotNan1.NW_018487195v1 I 305 C 0 s otoGar3.GL873528 20772773 65 - 38779656 AACCTGTTATTTGACTTGTCCTAAAACTGACATTGTTGGTGAACA----AATTACAGATTAATATCATT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145473 64 + 98207768 AACCTCTCATTCAACTTAGTGTAAACCTGAA---GGACTTGAGCGCAGCAAGT--CGATTAAGATGTTT i mm10.chr16 C 0 C 0 s canFam3.chr31 13847267 63 + 39895921 AACCTCTCATTTAACTTATCCTGAAACTGACATTGTAAGTGGACA----AGTT--TGATTGAGGTTATC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3650383 63 - 6883506 AACTTCTACTTTAACTTAATCTAAAACTGACATTGTAAGTTAACA----GGTT--TTATTTAAATTATT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1118168 119 + 2694913 I e micMur3.chr31 19222647 103 + 47401472 I a score=146952.000000 s hg38.chr21_KI270874v1_alt 116035 9 + 166743 CTGTGAATT s panTro5.chr21 3741638 9 + 33445071 CTGTGAATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367448 9 + 46275980 CTGTGAATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306862 9 - 13858734 CTGTGAATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489961 9 + 32716333 CTGTGAATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445095 9 - 185818997 CTGTGAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269391 9 - 192294377 CTGTGAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750391 9 + 9440265 CTGTGAATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479592 9 + 21915920 CTGTGAATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054364 9 - 90373283 CTGTGAATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238574 9 + 4234846 CTGTGAATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237734 9 - 13750039 CTGTGAAtt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962037 9 + 50472720 CTGTGAATT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055360 9 + 13128814 CTGTGAATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632149 9 - 14377064 CTGTGAATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770475 9 + 9889416 CTGTGAATT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19222750 9 + 47401472 CTGTGAATT i micMur3.chr31 I 103 C 0 s otoGar3.GL873528 20772838 9 - 38779656 CTGTTAATT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145537 9 + 98207768 CTGTGATGT i mm10.chr16 C 0 C 0 s canFam3.chr31 13847330 9 + 39895921 TTGTCCATT i canFam3.chr31 C 0 I 162 s dasNov3.JH568778 3650446 9 - 6883506 TCGTGAACT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1118168 119 + 2694913 I a score=57330.000000 s hg38.chr21_KI270874v1_alt 116044 3 + 166743 TTT s panTro5.chr21 3741647 3 + 33445071 TTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367457 3 + 46275980 TTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306871 3 - 13858734 TTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489970 3 + 32716333 TTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445104 3 - 185818997 TTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269400 3 - 192294377 TTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750400 3 + 9440265 TTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479601 3 + 21915920 TTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054373 3 - 90373283 TTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238583 3 + 4234846 TTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237743 3 - 13750039 ttt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962046 3 + 50472720 TTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055369 3 + 13128814 TTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632158 3 - 14377064 TTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770484 3 + 9889416 TTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19222759 3 + 47401472 TTT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20772847 3 - 38779656 TTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78145546 3 + 98207768 TTT i mm10.chr16 C 0 I 937 s canFam3.chr31 13847501 3 + 39895921 TTT i canFam3.chr31 I 162 C 0 s dasNov3.JH568778 3650455 3 - 6883506 TTT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1118168 119 + 2694913 I a score=3594.000000 s hg38.chr21_KI270874v1_alt 116047 1 + 166743 T s panTro5.chr21 3741650 1 + 33445071 T i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367460 1 + 46275980 T i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306874 1 - 13858734 T i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489973 1 + 32716333 T i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445107 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269403 1 - 192294377 T i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750403 1 + 9440265 T i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479604 1 + 21915920 T i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054376 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238586 1 + 4234846 T i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237746 1 - 13750039 t i colAng1.NW_012120598v1 C 0 I 160 s calJac3.chr21 21962049 1 + 50472720 A i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055372 1 + 13128814 A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632161 1 - 14377064 A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770487 1 + 9889416 A i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19222762 1 + 47401472 T i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20772850 1 - 38779656 T i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13847504 1 + 39895921 T i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3650458 1 - 6883506 T i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1118168 119 + 2694913 I e mm10.chr16 78145549 937 + 98207768 I a score=890909.000000 s hg38.chr21_KI270874v1_alt 116048 55 + 166743 AAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTAAAGAGGA s panTro5.chr21 3741651 55 + 33445071 AAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTAAAGAGGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367461 55 + 46275980 AAAGCCATACCACAATGCTATTATTCCAATGCTCGAATCATCTTTCTAAAGAGGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306875 55 - 13858734 AAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTAAAGAGGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4489974 55 + 32716333 AAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTAAAGAGGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445108 55 - 185818997 AAAGCCATACCACAATGCTATTATTCCAACGCTAGAATCATCTTTCTCAAGAGGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269404 55 - 192294377 AAAGCCATACCACAATGCTATTATTCCAACGCTAGAATCATCTTTCTCAAGAGGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750404 55 + 9440265 AAAGCCATACCACAATGCTATTATTCCAACGCTAGAATCATCTTTCTCAAGAGGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479605 55 + 21915920 AAAGCCATACCACAATGCTATTATTCCAACGCTAGAATCATCTTTCTCAAGAGGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054377 55 - 90373283 AAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTCAAGAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238587 55 + 4234846 AAAGCCATACCACAATGCTATTATTCCAACGCTAGAATCATCTTTCTCAAGAGGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237907 55 - 13750039 AAAGCCATACCACAATGCTATTATTCCAATGCTAGAATCATCTTTCTCAAGAGGA i colAng1.NW_012120598v1 I 160 C 0 s calJac3.chr21 21962050 55 + 50472720 AAAGCCATACCGCAATGCTATTATTCCAATGCTAGAATCATCTTTCTCAAGAGGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055373 55 + 13128814 AAAGCCGTACCACAATGCTATTATGCCAATGCTAGAATCACCTTTCTCAAGAGGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632162 55 - 14377064 AAAGCCATACCACAATACTATTACTCCAATGCTAGAATCATCTTTCTCAAGAGGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770488 55 + 9889416 AAAGCCATACCACAATGCTATTATTCCAGTGCTAGAATCATCTTTCTCAAGAGGA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19222763 55 + 47401472 AAAGCCATACTACGATGTTATTATTACAATCCTAGAATCATCTTTCTCAAGAGGG i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1118287 55 + 2694913 AAAGCCATACCACGATGCTGTTATTCCAATCCCAGAATCATCCTTCTCAAGAGGG i proCoq1.NW_012144079v1 I 119 C 0 s otoGar3.GL873528 20772851 55 - 38779656 AAAGCCAAAGCATGCAGCAATTATTCTAGTCCCAGAATTATCTTTCTCAAGAGGG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13847505 55 + 39895921 TAAGATATACCAGGATGTTATTATTTCAGTCCCTGAATCATCTCTCTCAAAAGAG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3650459 55 - 6883506 AAAGCCATAGCAAGATACTATTATTCCAATACAAGAATCACCTTTATCAAGATGG i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78145549 937 + 98207768 I a score=2507623.000000 s hg38.chr21_KI270874v1_alt 116103 186 + 166743 CCTCAAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATGTAGTCTT-T-TCTCTGCATTTCAAAGATTCTCC-TGTTCTAGATTGATGAGGAGATTCCTGATGCCAATATTTTCTAGT-------AGTCTACTTTCACTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TAACTTACATTTG s panTro5.chr21 3741706 186 + 33445071 CCTCAAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATGTAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGATGAGGAGATTCCTGATGCCAATATTTTCTAGT-------AGTCTACTTTCACTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TAACTTACATTTG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367516 186 + 46275980 CCTCAAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATGTAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGATGAGGAGATTCCTGATGCCAATATTTTCTAGT-------AGTCTACTTTCACTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TAACTTACATTTG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3306930 186 - 13858734 CCTCAAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATGTAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGATGAGGAGATTCCTGATGCCAATATTTTCTAGT-------AGTCTACTTTCATTGGTAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TAACTTACATTTG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4490029 186 + 32716333 CCTCAAAGATTCGGCAGGTAGG---GGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCCTC-TGTTCTAGATTGATGAGGAGATTCCTGATGCCAGTATTTTCTAGT-------AGTCTACTTTCATTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TAACTTACATTTG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445163 185 - 185818997 CCTCGAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGACAAGGAGATTCCTGATGCCAATATTTTCTAGT-------AGTCTA-TTTCATTGATAGGAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TGACTTACATTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269459 185 - 192294377 CCTCGAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGACAAGGAGATTCCTGATGCCAATATTTTCTAGT-------AGTCTA-TTTCATTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TGACTTACATTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750459 185 + 9440265 CCTCGAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGACAAGGAGATTCCTGATGCCAATATTTTCTAGT-------AGTCTA-TTTCATTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TGACTTACATTTG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479660 185 + 21915920 CCTCGAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGACAAGGAGATTCCTGATGCGAATATTTTCTAGT-------AGTCTA-TTTCATTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TGACTTACATTTG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054432 185 - 90373283 CCTCGAAGATTTGGCAGGTAGG---GGAGCAG----CCCCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGACAAGGAGATTCCTGATGCCAATATTTTCTAGT-------AGTCTA-TTTCATTGATAGAAGCAGCCAAAGAGAAACCTTA--GTGTGCTGCACACAGCTGGT-TGACTTACATTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238642 185 + 4234846 CCTCGAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAAGATTCTTC-TGTTCTAGATTGACAAGGAGGTTCCTGATGCCAATATTTTCTAGT-------AGTCTA-TTTCATTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TGACTTACATTTG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 237962 188 - 13750039 CCTCGAAGATTTGGCAGGTAGGGGAGGAGTAG----CCTCATATAGTCTT-T-TTTCTGCATTTCAAATATTCTTC-TGTTGTAGATTGACAAGGAGATCCCTGATGCCAATATTTTCTAGT-------AGTCTA-TTGCATTGATAGAAGCAGCCAAAGAGAAATCTTA--GTGTCCTGCACACAGCTGGT-TGACTTACATTTG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962105 182 + 50472720 CATCAAAGATTTGGCAGATAGG---GGAGTAG----CCTCATGTCGCCTTGT-TTTCTGCACTTCAAAGATTCTTC-TGTTCTAGATTAACAAGGAGATTCTTGTTGCCAGTATTTTCTAGT-------AGTCTACTTTCATTGGTAGAAGCAGCCAAAGAGAAATCTTG--GTGTCATGCACACAGCTGG------TTACATCTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055428 184 + 13128814 CATCAAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATGTAGTCTTTT-TTTCTGCACTTCAAAGATTCTTC-TGTTCTAGATTAACAAGGAAATTCCTGTTGCCAGTATTTTCTAGT-------AGTCTACTTTCATTGGTAGA---AGCCAAAGAGAAATCTTA--GTGTCATGCACACAGCTGGT-TAACTTATTTCTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632217 187 - 14377064 CATCAAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATGTAGTCTTTT-TTTCTGCATTTCAAAGATTTTTC-TGTTCTAGATTAACAAGGAGATTCCTGTTGCCAGTATTTTCTAGT-------AGTCTACTTTCATTGGTAGAAGCAGCCAAAGAGAAATCTTA--GTGTCATGCACACAGCTGGT-TAACTTATATCTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770543 187 + 9889416 CATCAAAGATTTGGCAGGTAGG---GGAGTAG----CCTCATGTAGTCTTTT-TTTCTGCACTTCAAAGATTCTTC-TTTTCTAGATTAACAAGGAGATTCCTGTTGCCAGTATTTTCTAGT-------AGTCTACTTTCATTGGTAGAAGCAGCCAAAGAGAAATCTTA--GTGTCATGCACATAGCTGGT-TAACTTATATCTG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19222818 182 + 47401472 CTTTGAAGCTTTGGCACATGGG---GTAGTAC----CCTCTTACAATCTT-T-TCTCTATATTTCAAGGAGTCTTC-TATTTGAGATTGGCAAGGAAATTTCTGTTGCCAGTATTTCCCAGT-------AGTCTACTTTCATTGATAATAG----CAAAGAGAAATGTTA--GTATCATGCACACAGACAAA-TAACTCATATTTG i micMur3.chr31 C 0 I 1 s proCoq1.NW_012144079v1 1118342 189 + 2694913 CTTCAAAGATTTGGCACATGGG---GTAGTAT----CCTCTTACAGTCTT-T-TCTCTATATTTCAAGGAGTCTTC-TATTTGAGATTGGCAAGGAAATTTCTGTGGCCAATATTTGCCAATATTTCCCAGTCTACTCTCATCAATAATAG----CAAAGAGAAATCTTA--GTATCATGCACACGGACAAA-TAACTCATATTTG i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20772906 180 - 38779656 CTTCAAAGATTTGGCATATGGG---GTAGTAG----ACTTTCAGATTCTT-T-TCTCTGTATTTCAAAGAGTCTCCTTATTTGAGATAGGCAAGGAAATCTCTGTGGCAAATGTTTTCCAGT-------AGTCTATTTTTATCAATAGTGG----CAAAGAGAAATCT-----TATTATGCATACGTCCAAT-TAATTCATGTTTg i otoGar3.GL873528 C 0 I 317 s mm10.chr16 78146486 169 + 98207768 CTTTTAAGATTTGGAAAGTAAA---GG-GCAG----CTTC-TACAGTCTT-TAGTTTTGCATCTCAAAGAATCTCC-TGGGCAAGGCT----AGAAATGTCCTGCTG---GATTTTTCTAGC-------TGCCATTTTCCTCTGATAGTAGCCATCAAAGAGGAGCGT-----TGTCTGGCA----GCT--C-TGAATCCCACCTG i mm10.chr16 I 937 I 9 s canFam3.chr31 13847560 176 + 39895921 CATCAGAGATTTGGAAGAT-GG---GGAGTAGTTATTCCCATGT-GTTTT-C-CCTTTGCATTTCAAAGAGCTTTT-CACTTGAGGTACACCAGGAAATCTCTGATGCCACTGTTTTCTACT-------GGTCTCCTTTCATTGATGGTGGTAGTCAAAAAGAAACCTTACCTTATTATATACCCAGCCAG--------------- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3650514 172 - 6883506 CATTAAAGAGTAAGAAGGTAGA---ATTGTAG----TCTC------TTTT-C-CCTCTGCATATCCAAGAGACTTC-TATTTGAGATTGGCAGGGAAATAT-TGTTGACAATTTTTTCAATG-------AGTTAA--TTTGTTGATAGTAG----CAAATAGAAG--TTA--CTATCATACACACAAATGGCATAATTTGCATTTG i dasNov3.JH568778 C 0 C 0 a score=1532433.000000 s hg38.chr21_KI270874v1_alt 116289 119 + 166743 CCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTTCTTTTTT-CTAGAATATGAAAATAGATGCAATTTAAGTTGGGAAAAGT s panTro5.chr21 3741892 119 + 33445071 CCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTTCTTTTTT-CTAGAATATGAAAATAGATGCAATTTAAGTTGGGAAAAGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367702 119 + 46275980 CCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTTCTTTTTT-CTAGAATATGAAAATAGATGCAATTTAAGTTGGGAAAAGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3307116 119 - 13858734 CCTTTACAGATGCATTGTATTTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATGCAATTTAAGTTGGGAAAAGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4490215 119 + 32716333 CCTTTATAGATGCAATGTATTTTTTATCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATGCAGTTTAAGTTGGGAAAAGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445348 119 - 185818997 CCTTTATGGATGCATTGTAATTTTTGTCTTTGAAAGGGCTTGA----TCATCTTTTT-------------------CTTTTTCAAATGCTAT---TTCCTTTTAT-CTAGAATGTGAAGATAGATACAATTTACGTTGGGAAAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269644 119 - 192294377 CCTTTATGGATGCATTGTAATTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATACAATTTACGTTGGGAAAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750644 118 + 9440265 CCTTTATGGATGCATTGTAA-TTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATACAGTTTACGTTGGGAAAATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479845 118 + 21915920 CCTTTATGGATGCATTGTAA-TTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTTCTTTTTT-CTAGAATGTGAAGATAGATACAATTTACGTTGGGAAAAGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054617 119 - 90373283 CCTGTATGGATGCATTGTAATTTTTGTCTTTGAAAGTGCTTAA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATACAATTTACGTTGGGAAAAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238827 116 + 4234846 CCTTTATGGATGCATT---ATTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAACGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATACAATTTACGTTTGGAAAAGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 238150 119 - 13750039 CCTTTATAGATGCATTGTAATTTTTGTCTTTGAAAGTGCTTGA----TCATCTTTTC-------------------CTTTTTCAAATGCTAT---TTCCTTTTTT-CTAGAATGTGAAGATAGATACAATTTAAGTTGGGAAAAGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962287 120 + 50472720 CCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGATTAA----TCATCTTTTC-------------------GTTTTTCAAATGCCGT---TTCCTTTTTTCCTGAAATGTGACAATAGATACTGTTTAAGTTGGGAAAAGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055612 120 + 13128814 CCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGATTAA----TCATCTTTTC-------------------CTTTTTCAAATGCCAT---TTCCTTTTTTCCTGAAATGTGACAATAGATACTATTTAACTTGGGAAAAGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632404 120 - 14377064 CCTTTATAGATGCACTGTATTTTTCGTCTTTGAAAGTGATTAA----TCTTCTTTTC-------------------CTTTTTCAAATGCCAT---TTCCTTTTTTCCTGAAATGTGACAATAGATACTATTTAAATTGGGAAAAGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770730 120 + 9889416 CCTTTATAGATGCATTGTATTTTTTGTCTTTGAAAGTGATTAA----TCATCTTTTC-------------------CTTTCTCAAATGCAGT---TTCCTTTTTTCCTGAAATGTGATGATAGATACTATGTAAGTTGGGAAAAGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19223001 117 + 47401472 AATTTATATGTGCATTGTATTTTCT-TCTTTGAAAGTACTTGA----CCATCTTTT--------------------TTTTCTCAAATGCATT---TTCTTTTTTC-CTGGAATATAAGGATAGAATTTATTTAAGTTGAGAAAAGT i micMur3.chr31 I 1 C 0 s proCoq1.NW_012144079v1 1118532 118 + 2694913 AATTTATGTGTGTATTGTATTTTCT-TCTTTGAAAGTACTTGA----CCATCTTTTC-------------------CCTTCTCAAATGCTGT---TTCTTTTTTC-CTGGAATATGACGATAGAAGTTATTTAAGTTGAGAAAAGT i proCoq1.NW_012144079v1 I 1 C 0 s mm10.chr16 78146664 141 + 98207768 CTTCTCTGCAACCACTGTGTTTTAT-TCTGGGAAAGTGCTTCAAGTGTCTTCTTTtctctctctctctctctctctctctctctctctctct---ctctctctct-ctAAAATGTGAAAATAGATGTAACTAAAGTTGAGAAAAAT i mm10.chr16 I 9 C 0 s canFam3.chr31 13847736 121 + 39895921 CTTTTATATATGCATTATATTTTCT-TCTTTGAAAGTCCTTGA----CCATCTTTTC-------------------CCTTCTCAGGTGTTCGTTATTTTTTTTTT-CTAGAATCTAAGGATAGATGTTATTTAAATTGAGAAAATT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3650686 112 - 6883506 TCTTTATATATGCATTGGATTCTCT-TATGTGAAAGTAGTTGA----AAG------C-------------------ACCTTGAATGTGTTCT---TTTCTTTGTT-GTGTTATATTAAAATAGATGTAAATTAAATTAAGAAAATT i dasNov3.JH568778 C 0 C 0 e otoGar3.GL873528 20773086 317 - 38779656 I a score=1659696.000000 s hg38.chr21_KI270874v1_alt 116408 125 + 166743 CAAAGGTGACAT-TAAAAAATAT----TTCA-CAACTAGGTAAGTAACTGGGGCATGG-GAAAG-----AAGGC-AGTTAG-AAAGGTGGGAAGGCTCTTGGGGAGG-------------------CTCAA-AAGATG----GCCATTTAATAACAGAGAGAG-- s panTro5.chr21 3742011 125 + 33445071 CAAAGGTGACAT-TAAAAAATGT----TTCA-CAACTAGGTAAGTAACTGGGGCATGG-GAAAG-----AAGGC-AGTTAG-AAAGGTGGGAAGGCTCTTGGGGAGG-------------------CTCAA-AAGATG----GCCATTTAATAACAGAGAGAG-- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367821 125 + 46275980 CAAAGGTGACAT-TAAAAAATGT----TTCA-CAACTAGGTAAGTAACTGGGGCATGG-GAAAG-----AAGGC-AGTTAG-AAAGGTGGGAAGGATCTTGGGGAGG-------------------CTCAA-AAGATG----GCCATTTAATAACAGAGAGAG-- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3307235 125 - 13858734 CAAAGGTGACAT-TAAAAAATAT----TTGA-CAACTAGGTAAGTAACTGGGGCATGG-GAAAG-----AAGGC-AGTTAG-AAAGGTGGGAAGGCTCTTGGGGAGG-------------------CTCAA-AAGATG----GCCATTTAATAACAGAGAGAG-- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4490334 125 + 32716333 CAAAGGTGACAT-TAAAAAATAT----TTAA-CAACTAGGTAGGTAACTGGGGCATGG-GAAAG-----AAGGC-AGTTAG-AAAGGTGGGGAGGCTCTTGGGGAGG-------------------CTCAA-AAGATG----GCCATCTAATAATGGAGATAG-- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445467 126 - 185818997 CAAAGGTGACAT-TAAAAAATAT----TTAA-CAACTAGGTAAGTAACTGGGGCATGA-GAAAG-----AAGGC-AGCTAGAAAAGGTGGGAAGGCTCTTGGGGAGG-------------------GTCAA-AAGATG----GCCATTTAATTATGGAGAGAG-- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269763 126 - 192294377 CAAAGGTGACAT-TAAAAAATAT----TTAA-CAACTAGGTAAGTAACTGGGGCATGA-GAAAG-----AAGGC-AGCTAGAAAAGGTGGGAAGGCTCTTGGGGAGG-------------------GTCAA-AAGATG----GCCATTTAATTATGGAGAGAG-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750762 126 + 9440265 CAAAGGTGACAT-TAAAAAATAT----TTAA-CAACTAGGTAAGTAACTGGGGCATGA-GAAAG-----AAGGC-AGCTAGAAAAGGTGGGAAGGCTCTTGGGGAGG-------------------GTCAA-AAGATG----GCCATTTAATTATGGAGAGAG-- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8479963 126 + 21915920 CAAAGGTGACAT-TAAAAAATAT----TTAA-CAACTAGGTAAGTAACTGGGGCATGA-GAAAG-----AAGGC-AGCTAGAAAAGGTGGGAAGGCTCTTGGGGAGG-------------------GTCAA-AAGATG----GCCATTTAATTATGGAGAGAG-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054736 126 - 90373283 CAAAGGTGACAT-TAAAAAATAT----TTAA-CAACTAGGTAAGTAACTGGGGCATGA-GAAAG-----AAGGC-AGCTAGAAAAGGTGGGAAGGCTCTTGGGGAGG-------------------GTCAA-AAGATG----GCCATTTAATCATGGAGAGAG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2238943 126 + 4234846 CAAAGGTGACAT-TAAAAAATAT----TTAA-CAACTAGGTAAGTAACTGGGGCATGA-GAAAG-----AAGGC-AGCTAGAAAACGTGGGAAGGCTCTTGGGGAGG-------------------GTCAA-AAGATG----GCCATTTAATTATGGAGACAG-- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 238269 126 - 13750039 CAAAGGTGACAT-TAAAAAATAT----TTAA-CAACTAGGTAAGTAACTGGGGCACGA-GAAAG-----AAGGC-AGCTAGAAAAGGTGGGAAGGCTCTTGGGGAGG-------------------GTCAA-AAGATG----GCCATTTAATTATGGAGAGAG-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962407 125 + 50472720 CAAAGGTGACAT-TAAAAAATAT----CTAA-CAATTTGGTAAAGAATTGGGGCCTGG-GAGAG-----AAGGC-AGCTAG-AAAGGTGGGAAGGCTCTTGAGTAGG-------------------CTCAA-AATACA----GCCATTGAATAATGAAGAGAG-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055732 126 + 13128814 CAAAGGTGACAT-TAAAAAATAT----CTAA-CAACTAGGTAAATAATTGGTGCCTGGCAAGAG-----AAGGC-AGCTAG-AAAGGTGGGAAGGCTCTTCAGGAGG-------------------CTCAA-AAGATG----GCCATTGAATAATGGAGAGAG-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632524 125 - 14377064 CAAAGGTGACAT-TAAAAAATAT----CTAA-CAACTAGGTAAATAATTGGTGCCTGG-GAGAG-----AAGGC-AGCTAG-AAAGGTGGGAAGGCTCTTGGGGAGG-------------------CTCAA-AGGATG----GCCATTGAATAATGGAGAGAG-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770850 125 + 9889416 CAAAGGTGACAT-TAAAAAATAT----CTAA-CAACTAGGTAAATAATTGGGGCCTGG-GAGAG-----AAGGC-AGCTAG-AAAGGTGGGAAGGCTCTTGGGGAGG-------------------CTCAA-AAGATG----GCCATTGAATAATGGAGAGAG-- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19223118 131 + 47401472 CAAAGGTGATATATAAAAAATAT----TTAA-TAACTAGTTAAATAACTAGGGCCTAC-AAGAGAAGCCAAGAC-AGCCCA-TAAGGTAGGAAGGCTCTTGGAGAGG-------------------CTCAA-AAGATG----GCCATTTAACAATGGAAAGAA-- i micMur3.chr31 C 0 I 6 s proCoq1.NW_012144079v1 1118650 131 + 2694913 CAAAGGTGATATATAAAAAATAT----TTAA-TAATTGGTTAAATAACTAGGGCCTAC-AAGAGACGCCAAGAC-AGCCCA-TAAGGTAGGAAGGCTCTTGGAGAGG-------------------CTCAA-AAGATG----GCCATTTAACAATGGAGAGAA-- i proCoq1.NW_012144079v1 C 0 I 22 s otoGar3.GL873528 20773403 132 - 38779656 CAACGGTGTTACATAAAAAATAT----TTAA-CAACTGGTTAAATAACTAGGGCCTGC-AAGAGAAGTTAAGAC-CACCCA-CCAGTTCGGAAAGCTTTTGGTGAAG-------------------CCCAAGAAGATA----GCCATTCAACCATGGAGAGAA-- i otoGar3.GL873528 I 317 I 6 s mm10.chr16 78146805 129 + 98207768 CAAAGATGACAT-TCTAAAATATATACCTAA-CAAATAGTT--TCTAATAGATCCTGG-GAGAAGAGCCAAGGA-GGCCAA-AGTCATGGAATGGCTTTTGAG--AG-------------------CTATA-AAGGTA-----CCATCAAATACCGGCAGAAT-- i mm10.chr16 C 0 I 4 s canFam3.chr31 13847857 118 + 39895921 CAAAGGT-ATAT-CTTAAAATAT-------------TAGTTAAATAACTAGAGCCTGG-GAGAGAAGCCAAGGC-AATTGG-GGACATAGGAAGGC-------AGGA-------------------CTCAA-AAGGTGGCAGGCTGTTCAATAATGGAGAGAA-- i canFam3.chr31 C 0 I 10 s dasNov3.JH568778 3650798 145 - 6883506 CAAAGGAGATTT-T--------T----TTAATTAATGAATTAAATCACTGGGGCCTGA-AAAAGAAGCCAAGGCAAGTCAG-GGATGTGGGGAAAATATTGGGCAGGGTGGGGAGGTAGAAGGGGTCTCAA-AAGAGA----GCTATTTAGCAACAGATAGTTAT i dasNov3.JH568778 C 0 C 0 a score=151249.000000 s hg38.chr21_KI270874v1_alt 116533 14 + 166743 TTCAGTCG-TCTTTT s panTro5.chr21 3742136 14 + 33445071 TTCAGTCG-TTTTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367946 14 + 46275980 TTCAGTCG-TTTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3307360 14 - 13858734 TTCAGTCA-TTTTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4490459 15 + 32716333 TTCAGTCATTTTTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445593 14 - 185818997 TTCAGTTG-TTTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269889 14 - 192294377 TTCAGTTG-TTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750888 14 + 9440265 TTCAGTTG-TTTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480089 14 + 21915920 TTCAGTTG-TTTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054862 14 - 90373283 TTCAGTTG-TTTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2239069 14 + 4234846 TTCAGTTG-TTTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 238395 14 - 13750039 TTCAGTTG-TTTTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962532 15 + 50472720 TTCAGTTGTTTTTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5055858 14 + 13128814 TTCAGTTG-TTTTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632649 14 - 14377064 TTCAGTTG-TTTTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8770975 14 + 9889416 TTCAGTTG-TTTTTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19223255 14 + 47401472 TCCAGTAT-TTTTTT i micMur3.chr31 I 6 I 3 s otoGar3.GL873528 20773541 14 - 38779656 TCCAGTGT-TTTTTT i otoGar3.GL873528 I 6 I 5 s mm10.chr16 78146938 3 + 98207768 TTC------------ i mm10.chr16 I 4 C 0 s canFam3.chr31 13847985 14 + 39895921 TTCAGGtt-tttttt i canFam3.chr31 I 10 I 15 s dasNov3.JH568778 3650943 12 - 6883506 TTCACTTT-TTTA-- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1118781 22 + 2694913 I a score=1048783.000000 s hg38.chr21_KI270874v1_alt 116547 71 + 166743 AACAAATAGTATGTTCTTATGGGTTCCTACTCTTTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA s panTro5.chr21 3742150 71 + 33445071 AACAAATAGTATGTTCTTATGGGTTCCTACTCTTTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17367960 71 + 46275980 AACAAATAGTATGTTCTTATGGGTTCCTACTCTTTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3307374 71 - 13858734 ATCAAATAGTATGTTCTTATGGGTTCCTACTCTCTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4490474 71 + 32716333 AACAAATAGTAAGTTCTTATGGGTTCCTACTATGTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445607 71 - 185818997 AACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269903 71 - 192294377 AACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750902 71 + 9440265 AACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480103 71 + 21915920 AACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054876 71 - 90373283 AACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2239083 71 + 4234846 AACAAATAGTATGTTCTTATGGGTTCCTGCTATCTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 238409 71 - 13750039 AACAAATAGTATGTTCTTACGGGTTCCTGCTATCTGGATTACCACCCTGAGCAAAC-------TTTTTCTTT--ATATGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962547 71 + 50472720 AACAAATAGTATGTTCTCATGGGTTCTTACTCTCTGGATTACCACCGTGAGCAAAC-------TTTTTCTTT--ATATGG i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5055872 71 + 13128814 AACAAATAATATGTTCTCATGGGTTCTTACTATCTGGATTACCACTGTGAGCAAAC-------TTTTTCTTT--ATATGA i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9632663 71 - 14377064 AACAAATAATATCTTCTCATGGGTTCTTACTATCTGGATTATCACCTTGAGCAAAC-------TTTTTCTTT--ATATGA i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8770989 71 + 9889416 AACAAATAGTAAGTTCTCATGGGTTCTTACTATCTGGATTACCACCATGAGCAAAC-------TTTTTCTTT--ATATGA i aotNan1.NW_018487195v1 C 0 I 1 s micMur3.chr31 19223272 73 + 47401472 AACAAATAGTATGTTCGTACAGGTTCCTATTAGCTGGATTTCCACCCTATGCAAAC-------TTTTTATTTAAAAATGA i micMur3.chr31 I 3 I 1 s proCoq1.NW_012144079v1 1118803 73 + 2694913 AACAAATAGTATGTTCTTACAGGTTCCTACTAGATGGATTTCCACCCTGTGCAAAC-------TTTTTATTTAAAAATGA i proCoq1.NW_012144079v1 I 22 I 1 s otoGar3.GL873528 20773560 63 - 38779656 AACAAATAGT----------AAGTCCCTACTAGCTGGATTTCCACCCTGTACAAAC-------TTTTTATTTAAAAATGA i otoGar3.GL873528 I 5 I 1 s mm10.chr16 78146941 66 + 98207768 ------TATGGTGTTCTTAGGAGTTCTGACTATGTGAGTCCCCACCAT-AGAGAAG-------GTTTGCTTTAAAAATAA i mm10.chr16 C 0 I 1 s canFam3.chr31 13848014 73 + 39895921 aaaaaCTATTGTAGTCAAAGGGGTTTCTACTACCTGAATTTCCACCCGGAGCAAAC-------TTTTCCTTTAAAAATGA i canFam3.chr31 I 15 I 439 s dasNov3.JH568778 3650955 69 - 6883506 AACAAATAGTGT---------GGTTACTACTAGCTGAATTTCCACACTGAGAAAATTACTTTGTTTTTCTTT--AAAAAA i dasNov3.JH568778 C 0 I 3 a score=2038849.000000 s hg38.chr21_KI270874v1_alt 116618 136 + 166743 TTCCCTTAAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCCTTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTGCAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- s panTro5.chr21 3742221 136 + 33445071 TTCCCTTAAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCTTTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTGCAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368031 136 + 46275980 TTCCCTTAAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCTTTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTGCAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3307445 136 - 13858734 TTCCCTTAAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCTTTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTGCAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4490545 135 + 32716333 TTCCCTTGAATCTAAACTCTGATTTGTGAAAACCCAAGAGAAGCTCTCCACATGAT-TTCACTGCTTGCCAGGTTAAACCTACAAAA-ATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445678 135 - 185818997 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCATTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCATGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162269974 135 - 192294377 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCGTTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCATGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8750973 135 + 9440265 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCATTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCATGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480174 135 + 21915920 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCTTTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15054947 135 - 90373283 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCGTTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2239154 135 + 4234846 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CTAAGAGAAGCGTTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGCGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 238480 135 - 13750039 TTCCCTTAAATCTAAACTCTGATTAGTGAAAA-CCAAGAGAAGCTTTCCACATGAT-TTCACTACTTGCCAGGTTAAACCTACAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962619 136 + 50472720 TTCCCTTCAATTTAAACCCTGATTTCTGAAAACCCAAGATAAGCTTTCCATATGAT-TTTTCTACTTGCCAGACTAAACCTACAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5055944 136 + 13128814 TTCCCTTAAATTTAAACCTTGATTTCTGAAAACCCAAGATAAGCTTTCCATATGAT-TTTTCTACTTGTCAGACTAAACCTACAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAATAAGA--------- i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9632735 136 - 14377064 TTCCCTTAAATCTAAACCCTGATTTCTGAAAACCCAAGATAAGCTTTCCATATGAT-TTTTCTACTTGCCAGACTAAACCTACAAAAGATGGTGTATCCATATTTCGTGACTTGGCTCTGGCCAGTTAGAAAAAAGA--------- i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8771061 136 + 9889416 TTCCCTTAAATCTAAACCCTGATTTCTGAAAACTCAAGATCAGCTTTCCATATGAT-TTTTCTACTTGCCAGACTAAACCTACAAAAGATGTTGTATCCATATTTCGTGACTTGGCTCTGTCCAGTTAGAAAAAAGA--------- i aotNan1.NW_018487195v1 I 1 C 0 s micMur3.chr31 19223346 137 + 47401472 TTCCCTTAAATCCAAACTCTTATTTGTGAAAACCCAAGAGAAGCTTTCCATATGCTCTTCTCCACTTGTCAGGTTAAATCTGCTGAAGATGACGTTTCCATACTCCATGACTCAGCTCTGGCCAGACAGAAAAAGAA--------- i micMur3.chr31 I 1 I 45 s proCoq1.NW_012144079v1 1118877 137 + 2694913 TTCCCTTAAATCCAAACTCTTATTTATGAAAATCCAAGAGAAGCTTTCCATATGCTCTTCTCCACTTGTCAGGTTAAATCTGCTGAAGATGACATTTCCATACTCCATGACTCATCTCTGGCCAAACAGAAAAAGAA--------- i proCoq1.NW_012144079v1 I 1 I 8 s otoGar3.GL873528 20773624 137 - 38779656 TCACCTTAAATCCAAACTCTTACTTTTTCAAACCCAAGAGAAGCTTTCCCTATGCTTTTCTCTACTTGCCAGGTTAAACCGGCTACCAATGACGTGTCCCCACTCCATGACTCAGTTCTGGCCAGTTAGAAAGTGAA--------- i otoGar3.GL873528 I 1 I 8 s mm10.chr16 78147008 126 + 98207768 CTCTCTTCGATCCAAACTCTCATGTATCCAAC-TCAGAATCTCATTTCCA-----T-TTCTCCA-TTAATAGACTGAACCTAAGGCAGACAATGTCTCCATGTCCCACAGCTCAGCTCTAGCTAGT---AAAAAGGA--------- i mm10.chr16 I 1 I 1 s canFam3.chr31 13848526 137 + 39895921 TTCTCTTAAATCCAAATTCTTTTTTGTTAAAAGACAAGAAAAGCTCTTCATATGCTCTTCTCTAGTTGTCAGGCTAAGCCTGTTAAAGATGGCATATCCATAGTCCATGGCTCAGCACTGGCCAGTTAGAAACAGGA--------- i canFam3.chr31 I 439 I 8 s dasNov3.JH568778 3651027 140 - 6883506 TTTCCTTAAATCCAAACTTTTATTTGTTAAAATTCAAGAGAAAGTTCCCATATGCTCTTCCCTACTTGCCAGGTTAAACCTTCTAAAGATGG-----CCATAATCCATGACACTGTT-TGGCAAGTTAAAAGAAAGGAGACTAGAG i dasNov3.JH568778 I 3 C 0 a score=613197.000000 s hg38.chr21_KI270874v1_alt 116754 43 + 166743 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- s panTro5.chr21 3742357 43 + 33445071 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368167 43 + 46275980 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3307581 43 - 13858734 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4490680 43 + 32716333 CAAGCATATGGTATTACTTTCCATGACTGATGACTTCGCTCTG- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445813 43 - 185818997 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270109 43 - 192294377 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751108 43 + 9440265 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480309 43 + 21915920 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055082 43 - 90373283 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2239289 43 + 4234846 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 238615 43 - 13750039 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962755 43 + 50472720 CAAGCATATGGTATTACTTTCCATGACTGGTGACTTTGCTCTG- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5056080 43 + 13128814 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632871 43 - 14377064 CAAGCATATGGTATCACTTTCCATGACTGATGACTTTGCTCTG- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8771197 43 + 9889416 CAAGCATATGGTATTACTTTCCATGACTGATGACTTTGCTCTG- i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1119022 43 + 2694913 CAAGCGTGTGGTGCTACTTTCCAATATGGATTACTTTGCCTTC- i proCoq1.NW_012144079v1 I 8 C 0 s otoGar3.GL873528 20773769 43 - 38779656 CAAGCACGTGGCATCACTTTCCACTATGGATTACTTTGCCTTC- i otoGar3.GL873528 I 8 C 0 s mm10.chr16 78147135 37 + 98207768 AAAGC---TGGGAT---TTTCCATTGCTGCTCCTTTTTATCTT- i mm10.chr16 I 1 I 1 s canFam3.chr31 13848671 43 + 39895921 CAAGTGTGAGGCATTAGTTTCCGTAGCTGATTACTTTGCCTTC- i canFam3.chr31 I 8 I 1 s dasNov3.JH568778 3651167 44 - 6883506 CAAAAATGTGGTGCTAAAATACATGATGGATTACTTTGTGCTCC i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19223483 45 + 47401472 I a score=2926446.000000 s hg38.chr21_KI270874v1_alt 116797 186 + 166743 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAT------------GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGTGTTGGTCTGGAAA--GAAAGAACAACCTATTTTTAGTC s panTro5.chr21 3742400 186 + 33445071 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC------------GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAGTTGGTCTGGAAA--GAAAGAACAACCTATTTTTAGTC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368210 186 + 46275980 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC------------GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAGTTGGTCTGGAAA--GAAAGAACAACCTATTTTTAGTC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3307624 186 - 13858734 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC------------GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAGTTGGTCTGGAAA--GAAAGAACAACCTATTTTTAGTC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4490723 186 + 32716333 CTGACACCTTTCCTTCCCACACTGTGTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC------------GTCCTCAGAAGCTCTCAAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155445856 186 - 185818997 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAT------------GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTTTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270152 186 - 192294377 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAT------------GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751151 186 + 9440265 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAT------------GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480352 186 + 21915920 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC------------GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGTCTGGAAA--GAAAGAACAATTTATTTTTAGTC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055125 186 - 90373283 CTGACACCTTTCCTTCCCACGCTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC------------GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAATTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2239332 186 + 4234846 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC------------GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGCGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 238658 186 - 13750039 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC------------GTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21962798 188 + 50472720 CTGACACCTTTCCTTCCCACTCTGTTTACCCTACTAATGTACCCACACA-AAAGAAGTCACCCTAAAAAC----------ATGTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAGCATAAGTTGAAGGTATAAAGATACAGAG-----TCATAGGGTTGGTCTGGAAA--GAAAGAACAACTCATTTTTAGTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5056123 188 + 13128814 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGCCAGCCTAAAAAC----------ATGTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGCTATAAAGATATAGAG-----TCATAGGGTTGGTCTGGAAA--GAAAGAACAACTTATATTTAGTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9632914 184 - 14377064 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGCAGCCACACA-AAAGAAG----CCTAAAAAC----------ACGTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGTGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCACAGAGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8771240 188 + 9889416 CTGACACCTTTCCTTCCCACACTGTTTACCCTACTAATGTAGCCACACA-AAAGAAGTCAGCCTAAAAAC----------ATGTCCTCAGAAGCTCTTGAGTTAGATAACTCAGAAGTTTCTTGAGAACATAAGTTGAAGGTATAAAGATACAGAG-----TCAAAGGGTTGGTCTGGAAA--GAAAGAACAACTTATTTTTAGTC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19223528 178 + 47401472 CTGACACTTTTCTTTCCCCCACTGTTTACCCTGAATATTTATCCACACA-AAAGAAGCCAGCATGAAAAC----------ATGTCCTCAG-AGCTCTTGAGTTAGAAAACTCAGAAATTTC-TATGAACATAAGTTGAGGGTATAAAGAT-------------ATAGAGTTAGTCTGGAAA--GAAAGAACAATTTATTTTTAGTG i micMur3.chr31 I 45 C 0 s proCoq1.NW_012144079v1 1119065 186 + 2694913 CTGACACTTTTCTTTCCCCCACTGTTTACCCTGAAAATTTATCCACACA-AAAGAAGCCAGCATGAAAAC----------ATGCCCTCAG-AGCTCTTGAGTTAG-ATACTCAGAAATTTCTTATGAACACAAGTTGAGTGTGTAAAGATATAGAG-----TCATAGAGTTAGTCTGGAAA--GAAAGAACAATTTATTTTTAGTG i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20773812 170 - 38779656 CTTACATTTTTCTTTCCCCCGCTGTTTGCCCTGAAAATTTATCCACACA-GAAGAAGCCAGCATGAAAAC----------ATGTCCTCAG-AGTTCTTGAGTCACATAACTC--AAATTCCTAATGAACAGAAGTTG-------AAAGGG-------------GTAAAGATAGTCTAGGAA--GAAAGAACCATATATTTTTAGTG i otoGar3.GL873528 C 0 I 440 s mm10.chr16 78147173 198 + 98207768 CCTGCATTATTGCTTCCTCCACTGTTCATCTTGAAAACACACAAACACA-CACTCATGCAGTGTGTAAACAATTCTCAGAAGCTCCTGAGAAGCTCCTAAGGTGGACAGCACAGGAATGTCTTGTAAACATAAACT-AAGATA-AAAGATGTAGAG-----TCATTGACATGGTCAGTTCATTGAAAGAATAATTTCTTATAAGTT i mm10.chr16 I 1 C 0 s canFam3.chr31 13848715 190 + 39895921 CAAATGCTTTTCCTTCCCCCACTGTTCACCCTGCAAATGCATCCACACGCAAAAAAGTCAGCC--AAAAT------------ATCCTCAGAAGCTCTTGAGTTAAATAACATGGAAATTTCTTATAAACATAAGTTGAAGGTATAGAGATATACAGATACAGTATAGAGTTGGTATGGAAA--TGAAGAATCATTTATTTTTGGTT i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3651211 174 - 6883506 CCAACACTTTTTCTTCCCACACCATTCACCCTGCAAATGCATCCATATA-AAA-ATGTAAGCCAGCAAAT----------TTGTCCTCAGAAGCTCT--AGCTAGAAAACTCAGAAATTTCTTGTGAACATAAGTTGAAGGTATAGAGA-----AC-----T------GTTGATGTAAAAG--GGAAGAACAATTTATTTTTAGTT i dasNov3.JH568778 C 0 C 0 a score=2260386.000000 s hg38.chr21_KI270874v1_alt 116983 151 + 166743 ATGGTTAGCACGAACCTATGTCTTGGATCTTACCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAATTTAAAAGTACTTAC---- s panTro5.chr21 3742586 151 + 33445071 ATGGTTAGCACGAACCTATGTCTTGGATCTTACCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i panTro5.chr21 C 0 I 4 s panPan2.chr21 17368396 151 + 46275980 ATGGTTAGCACGAACCTATGTCTTGGATCTTACCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i panPan2.chr21 C 0 I 4 s gorGor5.CYUI01015003v1 3307810 152 - 13858734 ATGGTTAGCACGAACCTATGTCTTGGATCTTACCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGGCTATAA------CAAGTTTTTATATAAAGTTTAAAAGTACTTAC---- i gorGor5.CYUI01015003v1 C 0 I 4 s nomLeu3.chr25 4490909 151 + 32716333 ATGGTTAGCATGAACCTATGTCTTGGATCTTACCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGCTTGAGTCATTGTAGT--CTGGAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i nomLeu3.chr25 C 0 I 4 s rheMac8.chr3 155446042 149 - 185818997 ATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTCTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i rheMac8.chr3 C 0 I 4 s macFas5.chr3 162270338 149 - 192294377 ATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTCTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i macFas5.chr3 C 0 I 4 s macNem1.NW_012019910v1 8751337 149 + 9440265 ATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTCTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i macNem1.NW_012019910v1 C 0 I 4 s cerAty1.NW_012002954v1 8480538 149 + 21915920 ATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i cerAty1.NW_012002954v1 C 0 I 4 s chlSab2.chr2 15055311 149 - 90373283 ATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i chlSab2.chr2 C 0 I 4 s manLeu1.NW_012102865v1 2239518 149 + 4234846 ATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAAGTTTAAAAGTACTTAC---- i manLeu1.NW_012102865v1 C 0 I 1204 s colAng1.NW_012120598v1 238844 149 - 13750039 ATGGTTAGCACGAACC--TGTCTTGGATCTTATCATTTCAAA-TAGC-TTGTGCCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGCCTATAA------CAAG-TTTTATATAAACTTTAAAAGTACTTAC---- i colAng1.NW_012120598v1 C 0 I 4 s calJac3.chr21 21962986 151 + 50472720 ATGGGTAGCATGAACCTATGTCTTGGATCTTACCAATGCAAA-TAGC-TTGTGTCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTGTAGT--CTGTAA-TTAGAGAGCTTATAA------CAAG-TTTTATATAAAGCTTAAAAGTACTTAC---- i calJac3.chr21 C 0 I 4 s saiBol1.JH378168 5056311 151 + 13128814 ATGGTTAGTATGAACCTATGTCTTGGATCTTACTAACGCAAA-TAGC-TTGTGTCA---GTTTTTAAAATCATGTTCACCACTTTTTGGCTGAGTCATTGTAGT--CTGTAA-TTAGAGATCTTATAA------TGAG-TTTTATATAAAGCTTAAAAGTACTTAC---- i saiBol1.JH378168 C 0 I 4 s cebCap1.NW_016107322v1 9633098 151 - 14377064 ATGGTTAGCATGAACCTGTGTCTTGGATCTTACCAATGCAAA-TAGC-TTGTGTCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAATCATTGTAGT--CTGTAA-TTAGAGAGCTTATAA------CGAG-TTTTATATAAAGCTTAAAAGTACTTAC---- i cebCap1.NW_016107322v1 C 0 I 4 s aotNan1.NW_018487195v1 8771428 151 + 9889416 ATGGTTAGCATGAACCTATGTCTTGGATCTTACCAATGCAAA-TAGC-TTGTGTCA---TTTTTTAAAATCATGTTCACCACTTTTTGGTTGAGTCATTATAGT--CTGTAA-TTAGAGAGCTTATAA------CAAG-TTTTATATAAAGCTTAAAAGTACTTAC---- i aotNan1.NW_018487195v1 C 0 I 4 s micMur3.chr31 19223706 157 + 47401472 ATGGCAAGCACAAATTTATGTCCTGGATATGACCATTTCAAAAGAGC-TTGAGCCA---TTTTTTTAAATCTTGTTCACCACTTTTTGGTTCAGTCATTGTAGT--CAGTAA-CTAGAGAGCATATATTAATAACATG-TTTTATATAAAGC-TAAAAGTACTCAT---- i micMur3.chr31 C 0 I 4 s proCoq1.NW_012144079v1 1119251 159 + 2694913 ATGGCAAGCACAAACCTATGTCCTGCATATGACCATTTCAAATGACCATTGGGCCA---TTTTTTTAAATCATATTCACCACTTTTTGGTTCAATCATTGTAGT--CAATAA-CTAGAGAGCATATATTAATAGCATG-TTTTATATAAAGCTTAAAAGTACTCAT---- i proCoq1.NW_012144079v1 C 0 I 4 s otoGar3.GL873528 20774422 152 - 38779656 ATGCTTACTACAAAACTATGCCTTGGATATCACCATTTCCAA-GAGC-TTGGGCCA---TTTTTTTAAATCATGTTCACCACTTTTTGGTTCACTCATTGTAGT--CTGTAA-CTAGAGCACATATGT------CATGTTTTTATATAAAGCTTACAAGTACTGAC---- i otoGar3.GL873528 I 440 I 4 s mm10.chr16 78147371 140 + 98207768 GTGGTTAGCATGAATCTATGCCCTGGGTGTTACAATTTCAAG-TGGC-ATGTGCCATATTGTTTAAAAATAATATTCATCAC--TCAGGCTGACTCACTATAGT--GTTTAACTTAGGGAA-----GA------TGGG-TAGTACGAAAACTCTGAGA------------ i mm10.chr16 C 0 C 0 s canFam3.chr31 13848905 134 + 39895921 ATGGTAAGCATGAACATACATCCTGGATATTATAAGTTCCAA-TAGT-TTGGGCCA---TTTCTTA----TATGTTCACCGCTTTTTTGTTTAGTCTCTGTGGT--GTATAC--------------GA------CAAA-CCTTACATAAAGCATAAAAGTACTTAT---- i canFam3.chr31 C 0 I 9 s dasNov3.JH568778 3651385 153 - 6883506 AATGTTAACACAAACATATGTCCTGGATATTCTAATTTCAAA-TAGC-TTGTGCCA---TTTTTT---ATCATGTTCACCACATTTTGGTTCAGTCACTGCAGTCCCTCTAA-CTATAGAGAATACAA------GAAA-CCTTATATAAATTTTA-AAGTGCTTATGCTC i dasNov3.JH568778 C 0 C 0 a score=2120169.000000 s hg38.chr21_KI270874v1_alt 117134 146 + 166743 TAAAAAAATAAAAGAGTCAAATATAAG-AATAAATACATGGTGAGGGAT-AGGGAAGTGTGGTATCTACAGGAGTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTTATTGAAATAAAG------------------GGCTTGGAAACCTTCTTT s panTro5.chr21 3742741 146 + 33445071 TAAAAAAATAAAAGAGTCAAATATAAG-AATAAACACATGGTGAGGGAT-AGGGAAGTGTGGTATCTACAGGAGTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------GGCTTGGAAACCTTCTTT i panTro5.chr21 I 4 C 0 s panPan2.chr21 17368551 145 + 46275980 T-AAAAAATAAAAGAGTCAAATATAAG-AATAAACACATGGTGAGGGAT-AGGGAAGTGTGGTATCTACAGGAGTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------GGCTTGGAAACCTTCTTT i panPan2.chr21 I 4 C 0 s gorGor5.CYUI01015003v1 3307966 146 - 13858734 TAAAAAAATAAGAGAGTCAAATATAAG-AATAAATACATGGTGAGGGAT-AGGGAAGTGTGGTATCTACAGGAGTCAGATACTTCCTTTGTGCTGCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------GGCTTGGAAACCTTCTTT i gorGor5.CYUI01015003v1 I 4 C 0 s nomLeu3.chr25 4491064 146 + 32716333 TAAAAAAGTAAGAGAGTCAAATATGAG-AATAAATACATGGTGAGGGAC-AGGGAAGTGTGGTATCTACCGGAGTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------GGCTTGGAAACCTTCTTT i nomLeu3.chr25 I 4 C 0 s rheMac8.chr3 155446195 146 - 185818997 TAAAAAAGTAAGAGAGTCAAATATAAG-AATAAATACGTGGTGAAGGAT-AGGGAAGCGTGGAATCTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------AGCTTAGAAACCTTCTTT i rheMac8.chr3 I 4 C 0 s macFas5.chr3 162270491 146 - 192294377 TAAAAAAGTAAGAGAGTCAAATATAAG-AATAAATACGTGGTGAAGGAT-AGGTAAGCGTGGTATCTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------AGCTTAGAAACCTTCTTT i macFas5.chr3 I 4 C 0 s macNem1.NW_012019910v1 8751490 146 + 9440265 TAAAAAAGTAAGAGAGTCAAATATAAG-AATAAATACCTGGTGAAGGAT-AGGGAAGCGTGGAATCTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------AGCTTAGAAACCTTCTTT i macNem1.NW_012019910v1 I 4 C 0 s cerAty1.NW_012002954v1 8480691 146 + 21915920 TAAAAAAGTAAGAGAGTCGAATATAAG-AATAAATACGTGGTGAAGGAT-CGGGAAGTGTGGTATCTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------AGCTTGGAAACCTTCTTT i cerAty1.NW_012002954v1 I 4 C 0 s chlSab2.chr2 15055464 146 - 90373283 TAAAAAAGTAAGAGAGTCAAATATAAG-AATAAATACGTGGTGAAGGAT-AGGGAAGTGTGGTATCTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------AGCTTGGAAACCTTCTTT i chlSab2.chr2 I 4 C 0 s manLeu1.NW_012102865v1 2240871 146 + 4234846 TAAAAAAGTAAGAGAGTCGAATATAAG-AATAAATACGTGGTGAAGGAT-CGGGAAGTGTGGTATCTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------AGCTTGGAAACCTTCTTT i manLeu1.NW_012102865v1 I 1204 C 0 s colAng1.NW_012120598v1 238997 146 - 13750039 TAAAAAAGTAAGACAGTCAAATATAAG-AATAAATACTTGGTGAAGGAT-AGGGAAGTGTGGTATCTACTGGATTCAGATACTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------AGCTTGGAAACCTTCTTT i colAng1.NW_012120598v1 I 4 C 0 s calJac3.chr21 21963141 146 + 50472720 TAAAAAAGTAAGAAAGTCAAATGTAAG-AATAATTATGTGGTGAGAGAT-AGGGAGGTGTGGTATCAACTGGATTCAGATGCTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------ATGTTGAAAACCTTCTTT i calJac3.chr21 I 4 C 0 s saiBol1.JH378168 5056466 146 + 13128814 TAAAAAAGTAAGAAAGTCAAATATAAG-AATAATTATGTGTTGAGAGAT-AGGGAGGTGTGGTATCAACTGGATTCAGATGCTTCCTTTGTGTTTCCTAAATTAATCACA-AAAGATTAATTGAAATAAAG------------------GGGTTGGAAACCTTCTTT i saiBol1.JH378168 I 4 C 0 s cebCap1.NW_016107322v1 9633253 146 - 14377064 TAAAAAAGTAAGAAAGTCAAATGTAAG-AATAATTATGTGGTGAGAGAT-AGGGAGGTGTGGTATCAACTGGATTCAGATGCTTCCTTTGTGCTTCCTAAATTAATCAGG-AAAGATTAATTGAAATAAAG------------------GGGTTGGAAACCTTCTTT i cebCap1.NW_016107322v1 I 4 C 0 s aotNan1.NW_018487195v1 8771583 146 + 9889416 TAAAAAAGTAAGAAAGTCAAATGTAAG-AATAATTATGTAGTGAGAGAG-AGGGAGGTGTGGTATCAACTGGATTCAGATGCTTCCTTTGTGCTTCCTAAATTAATAAGG-AAAGATTAATTGAAATAAAG------------------GGGTTGGAAACCTTCTTT i aotNan1.NW_018487195v1 I 4 C 0 s micMur3.chr31 19223867 146 + 47401472 TGAAAAAGTAAAAGAGCCAACAATAAG-AATAAATACATGGTGAGAAGT-AGGGAAGTGTGGTATCTACTGGATTAAGATGCTTTCTTTGTGTTTTTTTAAATGATTGGG-AAAGATTAACTGAAATAAAG------------------GATTTGGAGACCATCTTT i micMur3.chr31 I 4 I 36 s proCoq1.NW_012144079v1 1119414 146 + 2694913 TGAAAAAGTAAAAGAGCCAACAATAAG-AATAAATACATGGTGAGAAGT-AGGGAAGTGTGGTATCTACTGGATTAAGATGCTTTCTTTGTGCTTTTTAAAATGATTGGG-AAAGATTAACTGAAATAAAG------------------GATTTGGAGACCATCTTT i proCoq1.NW_012144079v1 I 4 I 36 s otoGar3.GL873528 20774578 162 - 38779656 TGAAAAAGTAAGAAAGTCAACAATAAG-AAGAAATACAAGG-GAGAAAT-AGGGAAGTGTGGTATCTACTGGAGTAATATACTTT-TTTGTGCTTTTTAAAATAATAGGG-AAAAATTAATTCAAATAAAGAATTTGAAAAAAAGTAATAATTTGGAGACCATCTTT i otoGar3.GL873528 I 4 C 0 s mm10.chr16 78147511 126 + 98207768 ----AAAGTAAGAAAATCAAAGAGATT-AATAATGATGTGGAGAGAAACAAAAGAGATACTATTGCCAATAGATTATGATATTACCTTTGTGCTTTGTAAATTTATTGGATAAATAGTaaatgaaataaaa------------------------------------ i mm10.chr16 C 0 C 0 s canFam3.chr31 13849048 132 + 39895921 TAAAA------------CAAATATAAGAAATAAAAACAG---GAGGAGT-AGAGAAATCTGGTATCTAGTGCGTTAAGGTACTTCCTTTGTGCTTTGTAAATTAATCAGG-GAAGATAAATTGAAATAAAG------------------TGCTGGGAGACTATCTTT i canFam3.chr31 I 9 C 0 s dasNov3.JH568778 3651538 123 - 6883506 TGAGAAAACAAGAG-GCCATACATAAA-AGTAAATATGTAGT-----AC-A----------ATATCTAGTGGGTTAAAAAAATTCCTTTATACTTTCTAAATTAATCAGG-GAATTCTAAATGAAATAAAG------------------TGGTGGGAGAC------- i dasNov3.JH568778 C 0 C 0 a score=241771.000000 s hg38.chr21_KI270874v1_alt 117280 46 + 166743 CAGC--Taaaa------aaaaaa---aaaaaaaaaa--------GTCTTTCAAGTAGACCAGGAG s panTro5.chr21 3742887 49 + 33445071 CAGC--Taaaa------aaaaaa---aaaaaaaaaa-----aaaGTCTTTCAAGTAGACCAGGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368696 47 + 46275980 CAGC--Taaaa------aaaaaa---aaaaaaaaaa-------aGTCTTTCAAGTAGACCAGGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308112 54 - 13858734 CAGC--Taaaa------aaaaaa---aaaaaaaaaaaaaaaaaaGTCTTTCAAGTAGACCAGGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491210 42 + 32716333 CAGC--TACAA------AAAAAA---AAAAAA------------GTCTTTCAAGTAGACCAGGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446341 42 - 185818997 TAGC--AAAAG------AAAAAA---AAAAAA------------GTATTTCAAGTAGACCAGGCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270637 42 - 192294377 TAGC--AAAAG------AAAAAA---AAAAAA------------GTATTTCAAGTAGACCAGGCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751636 42 + 9440265 TAGC--AAAAG------AAAAAA---AAAAAA------------GTATTTCAAGTAGACCAGGCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480837 41 + 21915920 TAGC--AAAAG-------AAAAA---AAAAAA------------GTATTTCAAGTAGACCAGGCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055610 48 - 90373283 TAGC--aaaagaaaaaaaaaaaa---aaaaaa------------GTATTTCAAGTAGACCAGGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241017 40 + 4234846 TAGC--AAAAG--------AAAA---AAAAAA------------GTATTTCAAGTAGACCAGGCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239143 44 - 13750039 TAGC--aaaag----aaaaaaaa---aaaaaa------------GTACTTCAAGTAGACCAGGCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21963287 48 + 50472720 TAGCTTTAAAG------AAAGAA---AAAGAAAACA--------GTCTCTCAATTAGACCAGGCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5056612 51 + 13128814 TAGCTTTAAAA------AAAAAAAAGAAAGAAAACA--------GCCTCTCAAGTAGACCAGGCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9633399 48 - 14377064 TAGCTTTAAAA------AAAGAA---AAAGAAAACA--------GTCTCTCAAGTAGACCACGCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8771729 48 + 9889416 TAGCTTTAAGA------AAAGAA---AAAGAAAACA--------GTCTCTCAAGTAGACTAGGCA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20774740 37 - 38779656 TAGC--TTTAA------ATGACC---A-----------------GTCCCTCACATAGATCATGCA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78147637 32 + 98207768 -----taaaat------aagata---aaataa-------------------aataagataaggta i mm10.chr16 C 0 C 0 s canFam3.chr31 13849180 38 + 39895921 CAGCTTTAAAT------AACTTA---------------------TCCTCTCAAGTAAGTCATGCA i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3651661 23 - 6883506 ------------------------------------------AATTCCCTGCAATAGACCATGCA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119560 36 + 2694913 I e micMur3.chr31 19224013 36 + 47401472 I a score=209806.000000 s hg38.chr21_KI270874v1_alt 117326 12 + 166743 AGAGAATGTATA s panTro5.chr21 3742936 12 + 33445071 AGAGAATGTATA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368743 12 + 46275980 AGAGAATGTATA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308166 12 - 13858734 AGAGAATGTATA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491252 12 + 32716333 AGAGAATGTATA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446383 12 - 185818997 AGAGAATGTATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270679 12 - 192294377 AGAGAATGTATA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751678 12 + 9440265 AGAGAATGTATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480878 12 + 21915920 AGAGAATGTATA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055658 12 - 90373283 AAAGAATGTATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241057 12 + 4234846 AGAGAATGTATA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239187 12 - 13750039 AGAGAATGTATA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21963335 12 + 50472720 AGAGAATGTATA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5056663 12 + 13128814 AGAGAATGTATA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9633447 12 - 14377064 AGAGAATGTATA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8771777 12 + 9889416 AGAGAATGTATA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19224049 12 + 47401472 AGAGAATGTATA i micMur3.chr31 I 36 C 0 s proCoq1.NW_012144079v1 1119596 12 + 2694913 AGAGAATGTATA i proCoq1.NW_012144079v1 I 36 C 0 s otoGar3.GL873528 20774777 12 - 38779656 ATAGAAGGTGTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78147669 12 + 98207768 agataaaataaa i mm10.chr16 C 0 I 252 s canFam3.chr31 13849219 12 + 39895921 GGAGAATATATA i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3651684 12 - 6883506 AAAGAACACCTA i dasNov3.JH568778 C 0 C 0 a score=602999.000000 s hg38.chr21_KI270874v1_alt 117338 42 + 166743 TTTTTCCTGAGATAAGTTGGTTAGGAAAAGGTC-AACCTATGT s panTro5.chr21 3742948 42 + 33445071 TTTTTCCTGAGATAAGTTGGTTAGGAAAAGGTC-AACCTATGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368755 42 + 46275980 TTTTTCCTGAGATAAGTTGGTTAGGAAAAGGTC-AACCTATGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308178 42 - 13858734 TTTTTCCCGAGATAAGTTGGTTAGGAAAAGGTC-AACCTATGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491264 42 + 32716333 TTTTTCCTGAGATAAGTTGGTTAGGAAAAAGTC-AACCTATGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446395 42 - 185818997 TTTTTCCTGAGATAAGTTGGTTGGGAAAAAGTC-AGCCTATGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270691 42 - 192294377 TTTTTCCTGAGATAAGTTGGTTGGGAAAAAGTC-AGCCTATGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751690 42 + 9440265 TTTTTCCTGAGATAAGTTGGTTGGGAAAAAGTC-AGCCTATGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480890 42 + 21915920 TTTTTCCTGAGAGAAGTTGGTTGGGAAAAAGTC-AGCCTATGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055670 42 - 90373283 TTTTTCCTGAGATAAGTTGGTTGGGAAAAAGTC-AGCCTATGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241069 42 + 4234846 TTTTTCCTGAGAGAAGTTGGTTGGGAAAAAGTC-AGCCTATGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239199 42 - 13750039 TTTTTCCTGAGATAAGTTGGTTAGGAAAAAGTC-AGCCTATGT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21963347 42 + 50472720 TTTTTCCTGAGATAAGTTGGTTAGGAAAAAGTC-AGCCTATGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5056675 42 + 13128814 CTTTTCCCGAGACAAGCGGGTTAGGAAAAAGTC-AGCCTGTGC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9633459 42 - 14377064 TTTTTCCTGAGAGAAGTTGGTTAGGAAAAAGTC-AGCTGATGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8771789 42 + 9889416 TTTTTCCTGAGATAAGTTGGTTAGGAAAAAGTC-AGCCTATGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19224061 42 + 47401472 TTTTTCCTGAGACAAGTCAGTTAAGACAAAGTC-AACTTATGT i micMur3.chr31 C 0 I 336 s proCoq1.NW_012144079v1 1119608 42 + 2694913 TTTTTCCTGAGATAAGTCAGTTAAGACAAAGTC-AACTTATGT i proCoq1.NW_012144079v1 C 0 I 47 s otoGar3.GL873528 20774789 42 - 38779656 TTTTTCCTGAGATAAGTTGGTTAAGAGAAAATC-AACTTAAGT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13849231 37 + 39895921 TTATTCCTGAAGTAAGTCAGTTTAGACAAAGTA-----TATG- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3651696 40 - 6883506 TTTTGCTTGAGATA--TCACTTGAGATGAAATCAAACACATG- i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78147681 252 + 98207768 I a score=487037.000000 s hg38.chr21_KI270874v1_alt 117380 59 + 166743 CCTCTTTGTGGCCA-TCTTCAGAACAGTTAGATACCGAAGAGCCCAGAGAGTGCTGTAAA s panTro5.chr21 3742990 59 + 33445071 CCTCTTTGTGGCCA-TCTTCAGAACGGTTAGATACCGAAGAGCCCAGAGAGTGCTGTAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368797 59 + 46275980 CCTCTTTGTGGCCA-TCTTCAGAACGGTTAGATACCGAAGAGCCCAGAGAGTGCTGTAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308220 59 - 13858734 CCTCTTTGTGGCCA-TCTTAAGAACGGTTAGATACCGAAGAGCCCAGAGAGTGCTGTAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491306 59 + 32716333 CCTCTGTGTGGCCA-TCCTCAGAATGGGTGGATACCAAAGGGCCCAGAGAGTGTTGTAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446437 59 - 185818997 CCTCTGTGTGGGCA-TCCTCAGAATGGTTGGATAATGAGGAGCCCAGTGAGTGCTGTAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270733 59 - 192294377 CCTCTGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGAGCCCAGTGAGTGCTGTAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751732 59 + 9440265 CCTCTGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGAGCCCAGTGAGTGCTGTAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480932 59 + 21915920 CCTATGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGAGCCCAGAGAGTGCTGTAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055712 59 - 90373283 CCTATGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGGGCCCAGAGAGTGCTGTAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241111 59 + 4234846 CCTATGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGAGCCCAGTGAGTGCTGTAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239241 59 - 13750039 CCTATGTGTGGGCA-TCCTCAGAATGGTTGGATACTGAGGAGCCCAGAGAGTGCTGTAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21963389 58 + 50472720 CCTATGTGTGGCTG-TCCTCAGAAT-TTTGGATACTGAGGAGCCCAGAGAGTTATGTGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5056717 58 + 13128814 CCTATGTGTGGCCG-TCCTCAGAAT-TTTGAATACTGAGGAGCCCAGAGAGTGATGTGAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9633501 58 - 14377064 CCTATGTGTGGCCG-TCCTCAGAAT-TTTAGATACTGAGGAGCCCAGAGAGTGATGTGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8771831 58 + 9889416 CCTACGTGTGGCCG-TCCTCAGAAT-TTTGGATACTGAGGAGCCCAGAGAGTGATGTGAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20774831 25 - 38779656 -------GTGGCCA-TCCTCAGAAC-TTTGGAAA-------------------------- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13849268 53 + 39895921 ------TGTGGCCACTCCTCAGAAC-TTTGGAGACTGAGTGGCTGAGACAGCATTGTCAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3651736 6 - 6883506 ------TGTGGC------------------------------------------------ i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119650 47 + 2694913 I e micMur3.chr31 19224103 336 + 47401472 I e mm10.chr16 78147681 252 + 98207768 I a score=673335.000000 s hg38.chr21_KI270874v1_alt 117439 57 + 166743 TTGAAAATACAATTTTAATGCATTCTCATCGAAGTTGTTTCTCTTCACCTGCTGTCT s panTro5.chr21 3743049 57 + 33445071 TTGAAAATACAGTTTTAATGCATTCTCACCGAAGTTGTTTCTCTTCACCTGCTGTCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368856 57 + 46275980 TTGAAAATACAGTTTTAATGCATTCTCACCGAAGTTGTTTCTCTTCACCTGCTGTCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308279 57 - 13858734 TTGAAAATACAATTTTAATGCATTCCCACCGAAGTTGTTTCTCTTCATCTGCTGTCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491365 57 + 32716333 TTGAAAATACAATTTTAATGCATTCCCACCGAAGTTGTTTCCCTTCACCTGCTGTCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446496 57 - 185818997 TGGAAAATACAGTTTTATTGCATTCCCACCAAAGTTGTTTCTCTTTACCTGCTGTCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270792 57 - 192294377 TGGAAAATACAGTTTTATTGCATTCCCACCGAAGTTGTTTCTCTTTACCTGCTGTCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751791 57 + 9440265 TGGAAAATACAGTTTTATTGCATTCCCACCGAAGTTGTTTCTCTTTACCTGCTGTCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8480991 57 + 21915920 TTGAAAATACAGTTTTAATGCATTCCCACCGAAGTTGTTTCTCTTTACCTGCTGTCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055771 57 - 90373283 TGGAAAATACAGTTTTAATGCATTCTCACCAAAGTTGTTTCTCTTTACCTGCTTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241170 57 + 4234846 TGGAAAATACAGTTTTATTGCATTCCCACCGAAGTTGTTTCTCTTTACCTGCTGTCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239300 57 - 13750039 TTGAAAATACAGTTTTAATGCATTCCCACTGAAGTTGTTTCTCTTTACCTGCTATCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21963447 55 + 50472720 TTGAAAATACAATTTTAATGCATTCTCGCCAAAGTTG--TCTCTTCATCTGCTGTCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5056775 55 + 13128814 TTGAAAATACAATTTTAAGGCATTCCCACCGAAGTTG--TCTCTTCATCTGCTGTCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9633559 55 - 14377064 TTGAAAATACAATTTTAATGCATTCCCGCCGAAGTTG--TCTCTTCATCTGCTGTCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8771889 55 + 9889416 TTGAAAATACAATTTTAATGCATTCCCACTGAAGTTG--TCTGTTCATCTGCTGTCT i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1119697 57 + 2694913 TTGAAAATATAATTTTAATACATTATCACCCAAATTGATTCTCTTCTCCTGCTGTCT i proCoq1.NW_012144079v1 I 47 I 2015 s otoGar3.GL873528 20774856 21 - 38779656 CTGAGAAATCAAG------------------------------------TGCTGTCT i otoGar3.GL873528 C 0 I 65 s canFam3.chr31 13849321 57 + 39895921 TTGGAAATACAATTTTAATACTTTACCATCCCAATTGTTTCCCTTCATCTGCTGTCT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3651742 44 - 6883506 -------------TTTAATGTATTCCCACCATAATTGTTCCCTTTTAACTGCTGTCT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19224103 336 + 47401472 I e mm10.chr16 78147681 252 + 98207768 I a score=111481.000000 s hg38.chr21_KI270874v1_alt 117496 11 + 166743 GCATGTTCTGC s panTro5.chr21 3743106 11 + 33445071 GCATGTTCTGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368913 11 + 46275980 GCATGTTCTGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308336 11 - 13858734 GCATGTTCTGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491422 11 + 32716333 GCATGCTCTGC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446553 11 - 185818997 TCATGCTCTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270849 11 - 192294377 TCATGCTCTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751848 11 + 9440265 TCATGCTCTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481048 11 + 21915920 TCATGCTCTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055828 11 - 90373283 TCGTGCTCTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241227 11 + 4234846 TCATGCTCTGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239357 11 - 13750039 TCATGCTCTGC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21963502 11 + 50472720 GCATGCTCTGC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5056830 11 + 13128814 GCATCCTCTGC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9633614 11 - 14377064 GCATGCTCTGC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8771944 11 + 9889416 GCATGCTCTGC i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 13849378 11 + 39895921 ACAAGCTCAAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3651786 11 - 6883506 GCAAACTCAAC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19224103 336 + 47401472 I e otoGar3.GL873528 20774877 65 - 38779656 I e mm10.chr16 78147681 252 + 98207768 I a score=74752.000000 s hg38.chr21_KI270874v1_alt 117507 6 + 166743 CTAAtg s panTro5.chr21 3743117 6 + 33445071 CTAAtg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368924 6 + 46275980 CTAAtg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308347 6 - 13858734 CTAAtg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491433 6 + 32716333 CTAAtg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446564 6 - 185818997 CTAAtg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270860 6 - 192294377 CTAATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751859 6 + 9440265 CTAAtg i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481059 6 + 21915920 CTAAtg i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055839 6 - 90373283 CTAAtg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241238 6 + 4234846 CTAAtg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239368 6 - 13750039 CTAAtg i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21963513 6 + 50472720 CTAATG i calJac3.chr21 C 0 I 438 s saiBol1.JH378168 5056841 6 + 13128814 CTAAtg i saiBol1.JH378168 C 0 I 22 s cebCap1.NW_016107322v1 9633625 6 - 14377064 CTAAtg i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8771955 6 + 9889416 CTAAtg i aotNan1.NW_018487195v1 C 0 I 1 s canFam3.chr31 13849389 6 + 39895921 CTAGTG i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e dasNov3.JH568778 3651797 0 - 6883506 C e micMur3.chr31 19224103 336 + 47401472 I e otoGar3.GL873528 20774877 65 - 38779656 I e mm10.chr16 78147681 252 + 98207768 I a score=9933.000000 s hg38.chr21_KI270874v1_alt 117513 4 + 166743 tttt s panTro5.chr21 3743123 4 + 33445071 tttt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368930 4 + 46275980 tttt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308353 4 - 13858734 tttt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491439 4 + 32716333 tttt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446570 4 - 185818997 tttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270866 4 - 192294377 TTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751865 4 + 9440265 tttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481065 4 + 21915920 tttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055845 4 - 90373283 tttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241244 4 + 4234846 tttt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239374 4 - 13750039 tttt i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5056869 1 + 13128814 t--- i saiBol1.JH378168 I 22 I 19 s cebCap1.NW_016107322v1 9633632 1 - 14377064 t--- i cebCap1.NW_016107322v1 I 1 I 7 s aotNan1.NW_018487195v1 8771962 1 + 9889416 t--- i aotNan1.NW_018487195v1 I 1 I 1 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e dasNov3.JH568778 3651797 0 - 6883506 C e micMur3.chr31 19224103 336 + 47401472 I e otoGar3.GL873528 20774877 65 - 38779656 I e calJac3.chr21 21963519 438 + 50472720 I e canFam3.chr31 13849395 0 + 39895921 C e mm10.chr16 78147681 252 + 98207768 I a score=1561143.000000 s hg38.chr21_KI270874v1_alt 117517 186 + 166743 gttgttgtggttgttgttgctgttttgagacagag--tcgccctttcacccacgctggagtgcagtgacgcgatctcggctcactgcaacctccacgtcccgggttcaagcgatttttctctctcagcctccagagtagctgcgcctacag----gcatgcatcaccacgcccag--ctaatttttgtattttt s panTro5.chr21 3743127 186 + 33445071 gttgttgtggttgttgttgttgttttgagacagag--tcgccctttcacccacgctggagtgcagtgacgcgatctcggctcactgcaacctccacgtcccgggttcaagcgatttttctctctcagcctccagagtagctgcgcctacag----gcatgcatcgccacgcccag--ctaatttttgtattttt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17368934 186 + 46275980 gttgttgtggttgttgttgttgttttgagacagag--tcgccctttcacccacgctggagtgcagtgacgcgatctcggctcactgcaacctccacgtcccgggttcaagcgatttttctctctcagcctccagagtagctgcgcctacag----gcatgcatcgccacgcccag--ctaatttttgtattttt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308357 188 - 13858734 gttgttgcggttgttgttgttgttttgagacagagtctcgctctttcacccacgctggagtgcagtgacgcgatctcggctcactgcaacctccacgtcccaggttcaagcgatttttctctctcagcctccagagtagctgcgcctacag----gcatgcatcaccacacccag--ctaatttttgtattttt i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491443 188 + 32716333 gttgttgtggttgttgctgttgttttgagacagagtctcgctctttcacccacgctggagtgcagtgatgcgatcttggctcactgcaacctccacgtcccgggttcaagcgatttttctccctcagcctccagagtagctgcaactacag----gcatgcatcaccacgcccag--ctaatttttgtattttt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446574 186 - 185818997 gttgttgta------gttgttgttttgagacagagtctcactctttcacccaggctggagtgcagtgacgcgatctcggctcactgcaacctccacctcccgggttcaagggatttttctgtcttagcctccagagtagctgggactactgagcagcatccaccaccacgcccag--ctaatttttgtattttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162270870 186 - 192294377 GTTGTTGTA------GCTGTTGttttgagacagagtctcactctttcacccaggctggagtgcagtgacgcgatcttggctcactgcaacctccacctcccgggttcaagggatttttctgtcttagcctccagagtagctgggactactgagcagcatccaccaccacgcccag--ctaatttttgtattttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8751869 186 + 9440265 gttgttgta------gttgttgttttgagacagagtctcactctttcacccaggctggagtgcagtgacgcgatctcggctcactgcaacctccacctcccgggttcaagggatttttctgtcttagcctccagagtagctgggactactgagcagcatccaccaccacgcccag--ctaatttttgtattttt i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481069 189 + 21915920 gttgttgta---gttgttgttgttttgagacagaatctcactctttcacccaggctggagtgccgtgacgcgatctcggctcactgcaacttccacctcccgggttcaagcgatttttctgtcttagcctccagagcagctgggactacagagtagcatccaccaccacgcccag--ctaatttttgcattttt i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15055849 189 - 90373283 gttgttgta---gttgttgttgttttgagacagagtctcactctttcacccaggctggagtgcagtgacgcgatctcggctcactgcaacctccacctcccggcttcaagcgatttttctgtcttagcctccagagcagctgggactacagagtagcatccaccaccacacccag--ctaatttttgcattttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241248 189 + 4234846 gttgttgta---gttgttgttgttttgagacagaatctcactctttcacccaggctggagtgccgtgacgcgatctcggctcactgcaacctccacctcccgggttcaagcgatttttctgtcttagcctccagagcagctgggactacagagtagcatccaccaccacgcccag--ctaatttttgcattttt i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239378 188 - 13750039 gttgttgtg---gtagttgttgttttgagacagagtctcgctctttcacccaggctggagtggagtgacgcgatctcggctcactgcaacctccacctcccaggttcaagcgatttttctgtcttagcctccagagtagctgggactatagagtagcatccaccaccacgcccag--ctaattttt-tattttt i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21963957 186 + 50472720 gtggtggtggtggcggcggtggttttgagacagag--tcatcttttcccccaggctggagtgcagtgatatgatctcggctcactgcaaactccacctcccaggttcaagtgatttttctgtttcagactcctgagtagctgagactatgg----gtgtgcatcaccatgcgcag--ctcattttggtattttt i calJac3.chr21 I 438 C 0 s saiBol1.JH378168 5056889 186 + 13128814 gtggcggcggcggtggtggtggttttgagacagag--tcactctttcacccaagctggaatgcagtgatatgatctcggctcactgcaaactccacctcccaggttcaagtgatttttctgtttcagactcctgagtagctgagactacgg----gtgtgcaccaccacatgcag--ctcattttggtattttt i saiBol1.JH378168 I 19 C 0 s cebCap1.NW_016107322v1 9633640 186 - 14377064 gtggtggtggtgttggtggtTGttttgagacagag--tcactctttcacccaggctggagtgcagtgatatgatctcggctcactgcaaactccacctcccaggttcaagtgatttttctgtttcagactcctgagtagctgagactatgg----gtgtgcgccaccacgtgcag--ctcattttggtattttt i cebCap1.NW_016107322v1 I 7 C 0 s aotNan1.NW_018487195v1 8771964 186 + 9889416 gtggtggtggtggtggttgtCGttttgagacagag--tcactctttcacacagcctggagtgcagtgatgtgatctcggctcactgcaaactccacctcccaggttcaagtgatttttctgtttcagactcctgagtagcggagactatgg----gtgtgtgccaccatgtgcag--ctaattttggtgttttt i aotNan1.NW_018487195v1 I 1 C 0 s canFam3.chr31 13849395 67 + 39895921 ---------------------GTTTTTAAA--------------------------------------------------------------------CCCAAATACAATTAATTGCTTTTTATTA--------------------------------------ATAATATCCAGATCTAAATTTTGTGTTTTT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e dasNov3.JH568778 3651797 0 - 6883506 C e micMur3.chr31 19224103 336 + 47401472 I e otoGar3.GL873528 20774877 65 - 38779656 I e mm10.chr16 78147681 252 + 98207768 I a score=1090613.000000 s hg38.chr21_KI270874v1_alt 117703 128 + 166743 agtggag-gggggcgggtttcaccatgttggccaggctgctctcgaactc-ctgacctcaatgatccgcctgcctcagcctccaaaact-actggggttacagctatgagccaccttgcccagGATACTGT s panTro5.chr21 3743313 128 + 33445071 agtggag-gggggcgggtttcaccatgttggccaggctgctctcgaactc-ctgacctcaatgatccgcctgcctcagcctccaaaact-actggggttacagctatgagccaccttgcccagGATACTGC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369120 128 + 46275980 agtggag-gggggcgggtttcaccatgttggccaggctgctctcgaactc-ctgacctcaatgatccgcctgcctcagcctccaaaact-actggggttacagctatgagccaccttgcccagGATACTGC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308545 127 - 13858734 agttg-g-gggggcgggtttcaccatgttggccaggctggtctcgaactc-ctgacctcaatgatctgcctgcctcagcctccaaaact-actggggttacagctatgagccaccttgcccagGATACTGC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491631 127 + 32716333 agtgg-g-gggagggggtttcaccatgttggccaggctggtctcgaactc-ctgacctcaatgatccacctgcctcagcctccaaaact-actgggattaccagtatgggccaccttgcccagGATACTGC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446760 126 - 185818997 ggtagag-aagg--aggtttccccatgttggtcaggctggtctcgaactc-cttacctcaatgatcctcctgcctcagcccctgaaact-actgggattacaggcatgagccaccttgcccagGATACTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271056 126 - 192294377 ggtagag-aagg--aggtttccccatgttggtcaggctggtctcgaactc-cttacctcaatgatcctcctgcctcggcccctgaaact-actgggattacaggcatgagccaccttgcccagGATACTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752055 126 + 9440265 ggtagag-aagg--aggtttccccatgttggtcaggctggtctcgaactc-cttacctcaatgatcctcctgcctcggcccctgaaact-actgggattacaggcacgagccaccttgcccagGATACTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481258 128 + 21915920 agtagagaaagg--gggtttccccatgttggccaggctagtctcaagctc-cttacctcaatgatccgcctgcctcggcccctgaaactaactgggattacaggcatgagccaccttgcccagGATACTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056038 126 - 90373283 agtagag-aagg--gggtttccccatgttggccaggctggtctcgaactc-cttacctcaatgatcctcctgccttggcccctgaaact-actgggattacaggcatgagccaccttgcccagGATACTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241437 128 + 4234846 agtagagaaagg--gggtttccccatgttggccaggctagtctcaagctc-cttacctcaatgatccgcctgcctcggcccctgaaactaactgggattacaggcatgagccaccttgcccagGATACTGC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239566 126 - 13750039 agtagag-aagg--gggtttccccatgttggccaggctggtctcaaactg-cttacctcaatgatccgcctgcctcggcccctgaaact-actggaattacaggcatgagccaccttgcccagGATACTAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964143 124 + 50472720 agtaaag-tggg---gatttcaccatgttggacagactagtctcgaactt-ctgacctcaatgatccgcctgcctcagcctcc-aaagt-cctgggattacaggggtgagccaccttgctcagGATACTGC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057075 126 + 13128814 agtaaag-aggg---gatttcaccatgttggacaggctagtcttgaatttcctgacctcaatgatccgcctgcctcagcctccaaaagt-cctgggattacaggggtgagccaccttgctcagGATACTGC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9633826 125 - 14377064 agtaaag-aggg---gattttaccatgttggacaggctagtctcaaactc-ctgacctcaatgatccgcctgcctcggcctccaaaagt-cctgggattacatgggcgagccacctcgctcagGATACTGC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772150 125 + 9889416 agtaaag-aggg---gatttcaccatgttggacaggctagtctcgaactc-ctgacctcaatgatccacctgccttggcctccaaaagt-cctgggattgcaggggtgagccaccttgctcagGATACTGC i aotNan1.NW_018487195v1 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e dasNov3.JH568778 3651797 0 - 6883506 C e micMur3.chr31 19224103 336 + 47401472 I e otoGar3.GL873528 20774877 65 - 38779656 I e canFam3.chr31 13849462 0 + 39895921 C e mm10.chr16 78147681 252 + 98207768 I a score=730287.000000 s hg38.chr21_KI270874v1_alt 117831 62 + 166743 CTAGTGTTTTTAAAATGCAAATGTGATCACTTTTTATTAATGTGACCTAGACATATGTTTCA s panTro5.chr21 3743441 62 + 33445071 CTAGTGTTTTTAAAATGCAAATGTGATCACTTTTTATTAATATGACCTAGACCTATGTTTCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369248 62 + 46275980 CTAGTGTTTTTAAAATGCAAATGTGATCACTTTTTATTAATATGACCTAGACCTATGTTTCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308672 62 - 13858734 CTAGTGTTTTTAAAATGCAAATGTGATCACTTTTTATTAATATTACCTAGACCTATGTTTCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491758 62 + 32716333 CTGGTGTTTTTAAAACGCAAATGCAATCACTTTTTATTAATATTACCCAGACCTATGTTTCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446886 62 - 185818997 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCTATGTTTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271182 62 - 192294377 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCTATGTTTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752181 62 + 9440265 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCTATGTTTCA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481386 62 + 21915920 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTACTATTACCTAGACCTATGTTTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056164 62 - 90373283 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCCATGTTTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241565 62 + 4234846 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTATTAATATTACCTAGACCTATGTTTCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239692 62 - 13750039 CTAGTGTTTTTAAAACCCAAATGCCATCACTTTCTACTAATATTACCTAGACCTATGTTTCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964267 62 + 50472720 CTAGTGTTTTTAAAACCAAAATGCAGTCACTTTTTATTAATATTACCTAGACCTATGTTTCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057201 62 + 13128814 CTAGTGCTTTTAAAACCCAAATACAATCACTCTTTATTAATATTACCTAGACCTATGTTTCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9633951 62 - 14377064 CTAGTGTTTTTAAAACCCAAATGCAATCACTTTTTATTAATATTACCTAGACCTATGTTTCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772275 62 + 9889416 CTAGTGTTTTTAAAACCCAAATGCAATCACTTTTTATTAATATTACCTAGACCTATGTTTTA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20774942 61 - 38779656 CTAGTATCTTCTAAACCC-AATGCAAACATTTTTGATTAATAACATCTAGATGTATGTTTTA i otoGar3.GL873528 I 65 C 0 s mm10.chr16 78147933 61 + 98207768 CTAGCATGTTTTAAGTCT-AATGAAATCACAATTTGCTCATCATACCTTAGCCAGTGTTTCA i mm10.chr16 I 252 C 0 s dasNov3.JH568778 3651797 60 - 6883506 CTTGTGTTTTTTAAACCCTATCACAATCACTTCTTATTAATAATATTTAGAC--ATGTTTCC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19224103 336 + 47401472 I e canFam3.chr31 13849462 0 + 39895921 C a score=699987.000000 s hg38.chr21_KI270874v1_alt 117893 54 + 166743 TTGTTCAAGAAAAGCACTC--TCCCCTTGATTTCTAAAACCAGAAAATATAAAGCT s panTro5.chr21 3743503 54 + 33445071 TTGTTCAAGAAAAGCACTC--TCCCCTTGATTTCTAAAACCAGAAAATATAAAGCT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369310 54 + 46275980 TTGTTCAAGAAAAGCACTC--TCCCCTTGATTTCTAAAACCAGAAAATATAAAGCT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308734 54 - 13858734 TTGTTCAAGGAAAGCACTC--TCCCCTTGATTTCTAAAACCAGAAAATATAAAGCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491820 54 + 32716333 TTGTTCAAGGAAAGCACTC--TCCCCTTGATTTCTAAAACCAGAAAATATAAAGCT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155446948 54 - 185818997 TTGTTCAAGGAAAGCACTC--TCCCGTTGATTTCTAAAACCAGAAAATACAAAGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271244 54 - 192294377 TTGTTCAAGGAAAGCACTC--TCCCGTTGATTTCTAAAACCAGAAAATACAAAGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752243 54 + 9440265 TTGTTCAAGGAAAGCACTC--TCCCGTTGATTTCTAAAACCAGAAAATACAAAGCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481448 54 + 21915920 TTGTTCAAGGAAAGCACTC--TCCCGTTGATTTCTAAAACCAGAAAATACAAAGCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056226 54 - 90373283 TTGTTCAAGGAAAGCACTC--TCCCGTTGATTTCTAAAACCAGAAAATACAAAGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241627 54 + 4234846 TTGTTCAAGGAAAGCACTC--TCCCGTTGATTTCTAAAACCAGAAAATACAAAGCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239754 54 - 13750039 TTGTTCAAGGAAAGCCCTC--TCCCGTTGATTTCTAAAACCAGAAAATATAAAGCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964329 54 + 50472720 TTGTTTAAGGAAAGCACTC--TCCCCTTGATTTCTAAAAACAGAAAATATAAAACT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057263 54 + 13128814 TTGTTTAAGGAAAGCACTC--TTCCCTTGATTTATAAAAACAGAAAATACAAAACT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634013 54 - 14377064 TTGTTTAAGGAAAGCACTC--TCCCCTTGATTTCTAAAAACAGAAAATATAAAACT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772337 54 + 9889416 TTGTTTAAGGAAAGCACTC--TCCCCTTGATTTCTAAAAACAGAAAATATAAAACT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20775003 56 - 38779656 TTGTTCAAGAAAAACACACATCCCCTCCAATTTACAAAATCACAAAATAGAAAGCT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78147994 49 + 98207768 CCTTTCAGTGAAAGCTCCC--CACCCTTGAGTTATAAA-----AAAGTCAAAGGCT i mm10.chr16 C 0 C 0 s canFam3.chr31 13849462 53 + 39895921 TTTTTTAAGGAAAGAACCT--CAGCCTTGATTTATAAAATCA-CAAACATAAAGCT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3651857 54 - 6883506 TTTTTCAGGAAGAGCACCC--CAGCCTTGATTAATAAAATCACAAAATATGGAACT i dasNov3.JH568778 C 0 I 5 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19224103 336 + 47401472 I a score=67374.000000 s hg38.chr21_KI270874v1_alt 117947 5 + 166743 GAGAG s panTro5.chr21 3743557 5 + 33445071 GAGAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369364 5 + 46275980 GAGAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308788 5 - 13858734 GGGAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491874 5 + 32716333 GGGAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447002 5 - 185818997 GGGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271298 5 - 192294377 GGGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752297 5 + 9440265 GGGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481502 5 + 21915920 GGGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056280 5 - 90373283 GGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241681 5 + 4234846 GGGAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239808 5 - 13750039 GGGAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964383 5 + 50472720 GGGAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057317 5 + 13128814 GGGAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634067 5 - 14377064 GGGAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772391 5 + 9889416 GGGAG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20775059 5 - 38779656 GGAAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148043 5 + 98207768 GAAAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13849515 5 + 39895921 GGAAG i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e dasNov3.JH568778 3651911 5 - 6883506 I e micMur3.chr31 19224103 336 + 47401472 I a score=1052010.000000 s hg38.chr21_KI270874v1_alt 117952 102 + 166743 TGATTATT-TCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTATTCATTCCAT-TC---TTCATTTCCCACATGCGAAATCTAAAACTCA s panTro5.chr21 3743562 102 + 33445071 TGATTATT-TCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTATTCATTCCAC-TC---TTCATTTCCCACATGCGAAATCTAAAACTCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369369 102 + 46275980 TGATTATT-TCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTATTCATTCCAC-TC---TTCATTTCCCACATGCGAAATCTAAAACTCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308793 102 - 13858734 TGATTATT-TCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTATTCATTCCAC-tc---ttcatttcccagatgcgaaatctaaaactca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491879 102 + 32716333 TGATTATT-TCATTCATGCAAC--------------AAATATATTTGTGTATCTATTACAGGTTCAGCCTTGTattcattccac-cc---ttcatttcccagatgagaaatctaaaactca i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447007 98 - 185818997 AGATTATT-TCATTCATACAAC--------------AAATATATTTGTGTATCTACTACAGGTTCAGCCTTGt----attccac-tc---ttcatttcacagatgagaaatctaaaactca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271303 98 - 192294377 AGATTATT-TCATTCATACAAC--------------AAATATATTTGTGTATCTACTACAGGTTCAGCCTTGt----attccac-tc---ttcatttcacagatgagaaatctaaaactca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752302 98 + 9440265 AGATTATT-TCATTCATACAAC--------------AAATATATTTGTGTATCTACTACAGGTTCAGCCTTGt----attccac-tc---ttcatttcacagatgagaaatcaaaaactca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481507 98 + 21915920 AGATTATT-TCATTCATACAAC--------------AAATATATTTGTGTATCTACTACAGGTTCAGCCTTGt----attccac-tc---ttcatttcacagatgagaaatctaaaactca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056285 98 - 90373283 AGATTATt-tcattcatacaac--------------aaatatatttgtgtgtctactacaggttcagccttgt----attccac-tc---ttcatttcgcagatgagaaatccaaaactca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241686 98 + 4234846 AGATTATT-TCATTCATACAAC--------------AAATATATTTGTGTATCTACTACAGGTTCAGCCTTGt----attccac-tc---ttcatttcacagatgagaaatctaaaactca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239813 98 - 13750039 AGATTATT-TCATTCATACAAC--------------AAATATATTTGTGTATCTACTACAGGTTCAGCCTTGt----attccac-tc---ttcatttcacagatgagaaatctaaaactca i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964388 98 + 50472720 TTACTCTTTTCATTCATGCAAC--------------AAATATATCTGTATATCTACTACAGGTTCAGCTTTGT----ATTCCG--Tc---ttcattctacagatgagaaaagtaaaactcc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057322 98 + 13128814 TTACTCTTTTCATTCATGCAAC--------------AAATATATTTGTATATCTGCTACAGGTTCAGCTTTGt----attcca--tc---ttcattctacagataagaaaactaaaactcc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634072 98 - 14377064 TTACTCTTCTCATTCATGCAAC--------------AAGCATATTTGTATATCTGCTACAGGCTCAGCATTGT----ATTCCG--tc---ttcattctacagataagaaaactaaaactcc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772396 98 + 9889416 TCACTCTTTTCATTCACGCAAC--------------AAATATATTTGTATATCTACTACAGGTTCAGCTTTGT----ATTCcc--tc---ttcattctacagatgagaaaagtaaaactcc i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20775064 95 - 38779656 AGATTCTC-TTATTCATATAAT--------------AAATATATGTTT--------TACAAGCTCAGGCTTTT--TCATTCCCC-CCAATTTTCTATCACAGCTAAGAATACTAAAACCTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148048 112 + 98207768 TAATTCTT-TCACTCCTGCAAAAAAAAAAAAAAAAGAAAAAGATTCTAACGTCTGCTGGACACTCCGACTTTT----GTTCCTT-GT---Ttcatgtcacagaggatgaaactgaaaccca i mm10.chr16 C 0 C 0 s canFam3.chr31 13849520 98 + 39895921 TAATTCTT-CTATTCCTAAAAT--------------AAGTATCTTTGCACACCTGCTTGAGGTTCAGCCTTTT----ATGGaca-cc---ctcctttcacagatgagaaaactcaaaccca i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3651916 96 - 6883506 TGATTCTT-TTTTTCAT---AC--------------ACATATCTTTGTGGGTTTACTGCAGGCTCACCTTTTA----ATTCCATGCc---ttcatttcacagaggagaacactaaaattca i dasNov3.JH568778 I 5 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19224103 336 + 47401472 I a score=785121.000000 s hg38.chr21_KI270874v1_alt 118054 57 + 166743 GAGATTTG-AAATCTCTTAACTGAGTTCACAAATCAGGACAAATTTTTCTTAGAAT----AC s panTro5.chr21 3743664 57 + 33445071 GAGATTTG-AAATCTCTTAACTGAGTTCACAAATCAGGACAAATTTTTCTTAGAAT----AC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369471 57 + 46275980 GAGATTTG-AAATCTCTTAACTGAGTTCACAAATCAGGACAAATTTTTCTTAGAAT----AC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308895 57 - 13858734 gagatttg-aaatctcttaactgagttcacaAATCAGGACATATTTTTCTTAGAAG----AC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4491981 41 + 32716333 gagaTTT-----------------GTTCACAAATCAGGGCAAATTTTTCTTAAAAG----AC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447105 57 - 185818997 gagatttg-aaatctcttaaccaagttcacaaatcaggacaAATTTATCTTAAAAC----AT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271401 57 - 192294377 gagatttg-aaatctcttaaccaagttcacaaatcaggacaAATTTATCTTAAAAC----AT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752400 57 + 9440265 gagatttg-aaatctcttaaccaagttcacaaatcaggacaAATTTATCTTAAAAC----AT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481605 50 + 21915920 -------g-aaatctcttaaccaagttcacaAATCAGGACAAATTTATCTTAAAAC----AC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056383 58 - 90373283 gagatttgaaaatctcttaaccaagttcacaaatcaggacaAATTGATCTTAAAAC----AT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241784 57 + 4234846 gagatttg-aaatctcttaaccaagttcacaaatcaggacaAATTTATCTTAAAAC----AC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239911 57 - 13750039 gagatttg-aaatctcttaaccgagttcacaaatcaggacaAATTTATCTTAAAAC----AT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964486 57 + 50472720 aagatttg-aaatctcttaaccaaattcacaAATCAGAACAAATTTATCTGAAAAG----AC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057420 57 + 13128814 aagatttg-aaatatcttaaccaagttcacaaatcaggacaaatttatcctaaaag----ac i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634170 57 - 14377064 aagatttg-aaatgtcttaaccaggttcacaaatcaggacaAATTTATCTTAAAAG----AC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772494 57 + 9889416 aagatttg-aaatctcttaaccaagttcacaaatcaggacaAATTTATCTTAAAAG----AC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19224439 57 + 47401472 gagatttg-aaatatcttaactaagttcacaAATCAGGACAAATTTCTCCTAAAAG----AC i micMur3.chr31 I 336 C 0 s otoGar3.GL873528 20775159 57 - 38779656 GAGATTTT-AAATATCTTAACTAAATTTACAAATCAGGACAAATTTGTCCTGAAAG----AC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148160 61 + 98207768 gagacttt-taatgtcctaaccaagttcacaAGTCAGAAGAAATCTATATGAAAAGCTCAAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13849618 57 + 39895921 aagattta-aaatgtctcaatcaagttcacaAATCAGGACAAATTTGTTTTAAAAG----AC i canFam3.chr31 C 0 I 442 s dasNov3.JH568778 3652012 56 - 6883506 aagatttg-aaataacataatcaagttcacaA-TAAGGGCAATTTTATTTTTAAAG----AC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I a score=1673339.000000 s hg38.chr21_KI270874v1_alt 118111 121 + 166743 AGAAATAGTTTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGGTAGT--AACACAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAATGTAG---AA--A---AAAA-TCTGCTGTTACAGACA- s panTro5.chr21 3743721 122 + 33445071 AGAAATAGTTTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGGTAGT--AACACAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAGTGTAG---AA--A---AAAAATCCGCTGTTACAGACA- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369528 122 + 46275980 AGAAATAGTTTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGGTAGT--AACACAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAGTGTAG---AA--A---AAAAATCCACTGTTACAGACA- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3308952 121 - 13858734 AGAAATAGTTTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGGTAGT--AACACAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAATGTAG---AA--A---AAAA-TCTGCTGTTACAGACA- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492022 121 + 32716333 AGAAATAGTTTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGTTAGT--AATATAGTTGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAATGTAG---AA--A---AAAA-TCTGCTGTTACAGACA- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447162 121 - 185818997 GGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGTTAGT--AATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAG---AA--A---AAAG-TCTGCTGTTACAGACA- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271458 121 - 192294377 GGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGTTAGT--AATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAG---AA--A---AAAG-TCTGCTGTTACAGACA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752457 121 + 9440265 GGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGTTAGT--AATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAG---AA--A---AAAG-TCTGCTGTTACAGACA- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481655 121 + 21915920 AGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGTTAGT--AATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATGTTAATGTAG---AA--A---AAAG-TCTGCTGTTACAGACA- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056441 121 - 90373283 GGAAGTAGTTTGAGCCTATGAAAATTAAGTCTGTTTAAA-TCCAGTTAGT--AATATCGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAG---AA--A---AAAG-TCTGCTGTTACAGACA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241841 121 + 4234846 GGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGTTAGT--AATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAAATATTAATGTAG---AA--A---AAAG-TCTGCTGTTACAGACA- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 239968 121 - 13750039 GGAAGTAGTCTGAGCCTATGAAAACTAAGTCTGTTTAAA-TCCAGTTAGT--AATATAGTTGGTTTCCGTCTTCTGAGCCTTTCAGGAACTATTAATGTAG---AA--A---AAAG-TCTGCTGTTACAGACA- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964543 119 + 50472720 AGAAGTCTTCTGAGTCTATGAAAACTACGTCTGTTTAAA-TCCAGTTAGT--AATA----TGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAGTATAG-AAAA--A---AAAA-TCTGCTGTTACAGACA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057477 124 + 13128814 agaagtcttctgagtcTATGAAAACTACGTCTGTTTAAATTCCAGTTAGT--AATACAG-TGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAGTGTAGAAAAA--A---AAAA-TCTGCTGTTACAGACA- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634227 123 - 14377064 AGAAGTTTTCTGAGTCTATGAAAACTAAGTCTGTTTAAA-TCCAGTTAGT--AATATAG-GGGTTTCCTTCTTCTGAGCCTTTCAGGAAATATTAGCATAGAAAAA--A---AAAA-TCTGCAGTTACAGACA- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772551 122 + 9889416 AGAAGTCTTCTGAGTCTGTGAAAACTAAGTCTGTTTAAA-TCCAATTAGT--AATATAGTTGGTTTCCATCTTCTGAGCCTTTCAAGAAATATTAATGTAG--AAA--A---AAAA-TCTTCTGTTACAGACA- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19224496 124 + 47401472 AGAGGTAGTCTGAGTCTTTGAAAACCAAGTCAGTTTAAA-TCTAGTTATT--AGCATAGTTGGTTTCCTTCTTCAGAGCCCTTCAGGACCTATTAATGTAG---AA--AAATAAAA-TCTGCTATTACAGACA- i micMur3.chr31 C 0 I 118 s otoGar3.GL873528 20775216 113 - 38779656 AGAACTAGTCTGAATTAAAGGAAACTAATTCAGTTTAAA-TCTAGTTAGTACAGTATAGTGGCTTTCCTTCTTCAGA----------AACTATTAATGTAG---AA--A---AAAG-GCTGCTGTTACAGATG- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148221 109 + 98207768 GAAAGTGCTATGAGCTCA---------------TTTAAA-CCCAGTTATT--GGTATAGCTGGGTTTCTTCTTCTAAGCATTTCACAAAATATTAATGTAGGAAAA--A---AAAA-TCTTTTGTGGCAACCC- i mm10.chr16 C 0 C 0 s canFam3.chr31 13850117 123 + 39895921 aGAGGTAGACCGAGTCTATGAACACTAATTCACTTTAAA-TCCAGTTCTT--AATAGAGTTGGTTTCCTTCTGCTGACCCTTTCAGGAAATATTAATCTAG---AAGGA---AAAA-TCTGCTATAGCAGTCA- i canFam3.chr31 I 442 C 0 s dasNov3.JH568778 3652068 122 - 6883506 ATAAGTAGTTTGAGCCTATGAAAACCAAGTCAGTTTAAA-TCTAACAATT--AATATAGTTGATCTCCCTCTCCTGGGCTTTTCAGGAAATATTTACGTAC---AA--A---AAAA-GCTGTTGTTACAGAACA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I a score=9112.000000 s hg38.chr21_KI270874v1_alt 118232 5 + 166743 TGCAA s panTro5.chr21 3743843 5 + 33445071 TGCAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369650 5 + 46275980 TGCAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309073 5 - 13858734 TGCAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492143 5 + 32716333 TGCAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447283 4 - 185818997 TG-AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271579 4 - 192294377 TG-AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752578 4 + 9440265 TG-AA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481776 4 + 21915920 TG-AA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056562 4 - 90373283 TG-AA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241962 4 + 4234846 TG-AA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240089 4 - 13750039 TG-AA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964662 5 + 50472720 CACAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057601 5 + 13128814 TATAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634350 5 - 14377064 CATAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772673 5 + 9889416 CACAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20775329 5 - 38779656 TGCAG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148330 3 + 98207768 --AGA i mm10.chr16 C 0 C 0 s canFam3.chr31 13850240 5 + 39895921 TGCAG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3652190 5 - 6883506 TGCAA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19224620 118 + 47401472 I a score=207651.000000 s hg38.chr21_KI270874v1_alt 118237 16 + 166743 GGTGTATCTTGCCGCa s panTro5.chr21 3743848 16 + 33445071 GGTGTATCTTGCCGCa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369655 16 + 46275980 GGTGTATCTTGCCGCa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309078 16 - 13858734 GGTGTATCTTGCCGCa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492148 16 + 32716333 GGTGTATCTCGCTGCa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447287 16 - 185818997 GGTATATCTTGCTACa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271583 16 - 192294377 GGTATATCTTGCTACa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752582 16 + 9440265 GGTATATCTTGCTACa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481780 16 + 21915920 GGTATATCTTGCTGCa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056566 16 - 90373283 GGTGTATCTTGCTGCa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241966 16 + 4234846 GGTATATCTTGCTGCa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240093 16 - 13750039 GGCGTATCTTGCTGCa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964667 16 + 50472720 GGTATATCTTGCTGCa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057606 16 + 13128814 GGTGTATCTTGCTGCa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634355 16 - 14377064 GATGTATCTTGCTGCa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772678 16 + 9889416 GGTGTATCTTGCTGCa i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20775334 16 - 38779656 TGTGTATCTTGCTGCA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148333 16 + 98207768 TGTGACTCTTGCTGCA i mm10.chr16 C 0 I 1 s canFam3.chr31 13850245 16 + 39895921 CGTATATCTTGATGCA i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e dasNov3.JH568778 3652195 0 - 6883506 C e micMur3.chr31 19224620 118 + 47401472 I a score=801726.000000 s hg38.chr21_KI270874v1_alt 118253 88 + 166743 --tgagaa-ttacttaatgggtacaatgcacattatttgggtggtggctaccctaaagccttgacttggcccccatgcaatctaggcatgc s panTro5.chr21 3743864 89 + 33445071 --taagaaattacttaatgggtacaatgcacattatttgggtggtggctaccctaaagccttgacttgaccaccatgcaatctaggcatgg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369671 89 + 46275980 --taagaaattacttaatgggtacaatgcacattatttgggtggtggctaccctaaagccttgacttgaccaccatgcaatctaggcatgg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309094 89 - 13858734 --tgagaaattacttaatgggtacaatgcacattatttgggtggtggctaccctaaagccttgacttgaccaccatgcaatctaagcatgg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492164 89 + 32716333 --tgagaaattacttaatgcgtacaatgtacattatttgggtggtggctacactaaaaccttgacttgaccaccatgcaatctaggcatgg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447303 89 - 185818997 --tgagaaattacttaataggtacaatgtacattattttggtggtggctagcctaaagccttgacttgaccaccatgcaatctaggcatgc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271599 89 - 192294377 --tgagaaattacttaataggtacaatgtacattattttggtggtggctagcctaaagccttgacttgaccaccatgcaatctaggcatgc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752598 89 + 9440265 --tgagaaattacttaataggtacaatgtacattattttggtggtggctagcctaaagccttgacttgaccaccatgcaatctaggcatgc i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481796 89 + 21915920 --tgagaaattacttaataggtacaatgtacattattttggtggtggctagcctaaagccttgacttgaccaccatgcaatctaggcatgc i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056582 89 - 90373283 --tgagaaattacttaataggtacaatgtacattatttggatggtggctagcctaaagctttgacttgaccaccatgcaatctaggcatgc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2241982 89 + 4234846 --tgagaaattacttaataggtacaatgtacattattttggtggtggctagcctaaagccttgacttgaccaccatgcaatctaggcatgc i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240109 89 - 13750039 --tgagaaattacttaataggtacaatgtacattatttgggtgggggctagcctaaagccttgacttgaccaccatgcaatctaggcatgc i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964683 89 + 50472720 --taagaaattatttaaggggtacaatgtacgttattcaggtggtggctaccctaaagcctagacttgaccaccatgcaatctaggtatgt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057622 89 + 13128814 --taagaaattatttaagcggtacaatgtacattattcaggtggtggctaccctaaagcctagaattgaccaccatgcaatctaggcatgt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634371 89 - 14377064 --taagaaattatttaaggggtacaatgtatgttattcaggtggtggctaccctaaagcctagacttgaccaccatgcaatctaagcatgt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772694 89 + 9889416 --taaaaaattatttaaggggtacaatgtacgttatccaggtggtggctaccctaaatcctagacttgaccaccatgcaatctaggcatgt i aotNan1.NW_018487195v1 C 0 C 0 s mm10.chr16 78148350 28 + 98207768 --TAAAGAAT----------------------------------------------------------ACTATCATG---TCCAGATGAGC i mm10.chr16 I 1 C 0 s canFam3.chr31 13850261 19 + 39895921 ATAGAGAAACT----------------------------------------CATAAAGC-------------------------------- i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e dasNov3.JH568778 3652195 0 - 6883506 C e micMur3.chr31 19224620 118 + 47401472 I e otoGar3.GL873528 20775350 0 - 38779656 C a score=350865.000000 s hg38.chr21_KI270874v1_alt 118341 44 + 166743 aacaaaattttacctgtgccccatacccttatataaatt---aaaaa s panTro5.chr21 3743953 44 + 33445071 aacaaaattttacctgtaccccatacacttatataaatt---aaaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369760 41 + 46275980 aacaaaattttacctgtaccccatacacttatataaatt------aa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309183 47 - 13858734 aacaaaattttacctgtaccccatacacttatataagttaaaaaaAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492253 44 + 32716333 aacaaaattttacctgtaccccacacacttatatacatt---taaaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447392 44 - 185818997 aacaaaattttacgtgtaccccgtacatttatataaatt---aaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271688 44 - 192294377 aacaaaattttacgtgtaccccgtacatttatataaatt---aaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752687 44 + 9440265 aacaaaattttacgtgtaccccgtacatttatataaatt---aaaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481885 44 + 21915920 aacaaaattttacgtgtaccccgtacatttatataaatt---aaaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056671 44 - 90373283 aacaaaattttacctgtaccccatatatttatataaatt---aaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242071 44 + 4234846 aacaaaattttacgtgtaccccgtacatttatataaatt---aaaaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240198 44 - 13750039 aacaaaattttacctgtaccccatacatttatataaatt---aaaaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964772 44 + 50472720 aacaaaattttacctgcacctcatacatttatataaata---aTAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5057711 44 + 13128814 aacaaaattttacctgcacctcatacatttacataaaca---aTAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634460 44 - 14377064 aacaaaattttacatgcacctcctacatttacataaata---aTAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772783 44 + 9889416 cacaaaattttacctgcgcctcatacatttacataaata---aTAAT i aotNan1.NW_018487195v1 C 0 C 0 s dasNov3.JH568778 3652195 14 - 6883506 ATCATAACTTTAAA--------------------------------- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19224620 118 + 47401472 I e otoGar3.GL873528 20775350 0 - 38779656 C e canFam3.chr31 13850280 0 + 39895921 C e mm10.chr16 78148378 0 + 98207768 C a score=32746.000000 s hg38.chr21_KI270874v1_alt 118385 6 + 166743 aAAAAA s panTro5.chr21 3743997 6 + 33445071 aAAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369801 6 + 46275980 aaaaAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309230 6 - 13858734 AAAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492297 6 + 32716333 aaaAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447436 6 - 185818997 aCAAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271732 6 - 192294377 aCAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752731 6 + 9440265 aCAAAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481929 6 + 21915920 aCAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056715 6 - 90373283 aAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242115 6 + 4234846 aCAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240242 6 - 13750039 aAAAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964816 6 + 50472720 TTCAAA i calJac3.chr21 C 0 I 4 s saiBol1.JH378168 5057755 6 + 13128814 TTTAAA i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9634504 6 - 14377064 TTTTAA i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8772827 6 + 9889416 TTAAAA i aotNan1.NW_018487195v1 C 0 I 1 s otoGar3.GL873528 20775350 6 - 38779656 GTAAAA i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3652209 6 - 6883506 ATAAGG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19224620 118 + 47401472 I e canFam3.chr31 13850280 0 + 39895921 C e mm10.chr16 78148378 0 + 98207768 C a score=821314.000000 s hg38.chr21_KI270874v1_alt 118391 90 + 166743 A----ACTTTACAAAGGTCAGGTCA-TCCAAGAATCAACAGCATTTAGATAGATGTTTTAGGTccctgtagctcaaagtatggccctgagattat s panTro5.chr21 3744003 90 + 33445071 A----ACTTTTCAAAGGTCAGGTCA-TCCAAGAATCAACAGCATTTAGATAGATGTTTTAGGTccctgtagctcaaagtatggccctgagattat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369807 90 + 46275980 A----ACTTTTCAAAGGTCAGGTCA-TCCAAGAATCAACAGCATTTAGATAGATGTTTTAGGTccctgtagctcaaagtatggccctgagattat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309236 90 - 13858734 A----ACTTTACAAAGGTCAGGTCA-TCCAAGAATCAACAGCATTTAGATAGATGTTTTAGGTccctgtagctcaaagtatggccctgagattat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492303 90 + 32716333 A----ACTTTACAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGATGATTTAGGTccctgtagctcaaagtatggccctgagattct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447442 89 - 185818997 A----ACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACATTTTAGGTCCCTCTATctcaaagtatgg-cctcagattat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271738 89 - 192294377 A----ACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACATTTTAGGTCCCTCTATctcaaagtatgg-cctcagattat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752737 89 + 9440265 A----ACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACACTTTAGGTCCCTCTATctcaaagtatgg-cctcagattat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8481935 89 + 21915920 A----ACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACGTTTTAGGTCCCTCTATctcaaagtatgg-cctcagattat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056721 93 - 90373283 A-AACACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACGTTTTAGGTCCCTACACctcaaagtatggccctcagattat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242121 89 + 4234846 A----ACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGAAATTTTAGGTCCCTCTATctcaaagtatgg-cctcagattat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240248 94 - 13750039 AAAAAACTTTAGAAAGATCAGATCA-TCCAAGAATCAACAGCATTTAGATAGACGTTTTAGGTCCCTGTACctcaaaatatggccctcagattat i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5057762 90 + 13128814 A----GCTTTACAAAGATCAGATCA-TACAAGAATCAACAGCATTTACATAGATGTTTTAGGTccctgtaactcaaagtatggccctcagattat i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9634511 90 - 14377064 A----ACTTTACAAAGATCAGATCA-TCCAAGAATCAACAGCATTTACATAGATGTTTTAGGTccctgtaactcaaagtatggccctcagattat i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8772834 90 + 9889416 A----ACTTTACAAAGATCAGATCA-TCCAAGAATCAACAGCATTTACATAGATGTTTTAGGTccctgtaactaaaagtatggccctcagattat i aotNan1.NW_018487195v1 I 1 C 0 s otoGar3.GL873528 20775356 58 - 38779656 A----ATTTTATTATGAT---------------------------------GATGTTGGGAGTccttgtaactggaactatggccctcagatcag i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148378 63 + 98207768 --------------------------CCCAAGAATT-GCAACATTTGAAAACATGGCTTAGGTCTTTC--ACT---GGGGCAGCCCTACAGTCAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13850280 79 + 39895921 ---------------AATCAGCTCACCCCAAGAATC-ATTGCATTTAGAAAGATGCTTTAGATTCTTAAAactccaagtatggtccttggatcag i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3652215 86 - 6883506 A----ACTTTATAA---TAAGATCACTCCAAGAATC-ACTGCATTTAGAAAAGTATTTGAACT-cttgtaactcaaagtgtggtcctaagatcag i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19224620 118 + 47401472 I e calJac3.chr21 21964822 4 + 50472720 I a score=2436839.000000 s hg38.chr21_KI270874v1_alt 118481 186 + 166743 cagcacctgggaacttattagaaatgcagaatcttaggcccca-t-ccagagttcctcaattatttctgcattttaacaatatcct--ccaggtgatttgtatatgcattattaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAATGTGTGT s panTro5.chr21 3744093 186 + 33445071 cagcacctgggaacttattagaaatgcagaatcttaggcccca-t-ccagagttcctcaattatttctgcattttaacaatatcct--ccaggtgatttgtatatgcattattaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAATGTGTGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17369897 186 + 46275980 cagcacctgggaacttattagaaatgcagaatcttaggcccca-t-ccagagttcctcaattatttctgcattttaacaatatcct--ccaggtgatttgtatatgcattattaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAATGTGTGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309326 186 - 13858734 cagcacctgggaacttattagaaatgcagaatcttaggcccca-t-ccagagttcctcaattatttcttcattttaacaatatcct--ccaggtgatttgtatacgcattactaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAATGTGTGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492393 186 + 32716333 cagcacctgggaacttattagaaatgcagaatcttaggcccca-c-ccagagttcctcaattatttctgcattttaacaatatcct--ccaggtgatttgtatatgcattattaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAACTTATAATCTTAAAAATGCATGAGCTAAAATGTGTGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447531 186 - 185818997 cagcacctgggaacttactagaaatgcagaatcttaggcccca-t-ccagagttcctcgattatttctgaattttaacaatatcct--ccaggtgatttgtatacgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAATGTGTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162271827 186 - 192294377 cagcacctgggaacttactagaaatgcagaatcttaggcccca-t-ccagagttcctcgattatttctgaattttaacaatatcct--ccaggtgatttgtatacgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAATGTGTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8752826 186 + 9440265 cagcacctgggaacttactagaaatgcagaatcttaggcccca-t-ccagagttcctcgattatttctgaattttaacaatatcct--ccaggtgatttgtatacgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAATGTGTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482024 186 + 21915920 cagcacctgggaacttactagaaatgcagaatcttaggcccca-t-ccagagttcctcgattatttctgaattttaacaatatcct--ccaggtgatttgtatacgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAATGTGTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15056814 186 - 90373283 cagtacctgggaacttactagaaatgcagaatcttaggcccca-t-ccagcgttcctcaattatttctgaattttaacaatatcct--ccaggtgatttgtatatgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAATGTGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242210 186 + 4234846 cagcacctgggaacttactagaaatgcagaatcttaggcccca-t-ccagagttcctcgattatttctgaattttaacaatatcct--ccaggtgatttgtatacgtattattaacctttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGTATTAGCTAAAATGTGTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240342 186 - 13750039 cagcacctgggaacttattagaaatgcagaatcttaggcccca-t-ccagagttcctcgattatttctgaattttaacaatatcct--ccaggtgatttgtatacgtattattaaactttgaaaagtactgTTTTAAATGATCTT-GAAAATAATTTATAATCTTAAAAATGCATTAGCTAAAACGTGTGT i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5057852 185 + 13128814 cagcaactgggaacttattagaaatgcagaatctcaggcccca-t-ccagagtttctcaattatttctgcattttaacaatatcct--ccaggtgattt-tacatgcattattaaactttgaaaagcactgTTTTAAATTATCTT-GAAAATCACTTGTAATCTTAAAAATGCATGAGCTAAAATGTGTGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634601 185 - 14377064 cagcatctaggaacttattagaaatgcagaatctcaggcccca-t-ccagagtttttcaattatttctgcattttaacaatatcct--ccaggtgattt-tacatgcattattaaactttgaaaagcactgTTTTAAATTATCTT-GAAAATAACTTGTAATCTTAAAAATGCATGAGCTAAAATGTGTGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8772924 184 + 9889416 cagcacctgggaacttattagaaatgcagaatctcagg-ccca-t-ccagagtttctcaattattgctgcattttaacaatatcct--ccaggtgattt-tacatgcattattaaactttgaaaagcactgTTTTAAATTATCTT-GAAAATAACTTGTTATCTTAAAAATGCATGAGCTAAAATGTGTGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19224738 184 + 47401472 cagcacctgataacttgttaaaaatgtagaatccaaggcccta-tcccagagcccctgaatgatttctacattttaacaatatcct--ccaggtgatttttacatgcat---taaagtttgaaaaacactgTTTTAAGTGATCTT-GGATATAGGTTCTTATCTTAAAAACATATGAGCCAAAATATGAGT i micMur3.chr31 I 118 C 0 s otoGar3.GL873528 20775414 184 - 38779656 cagcacctgaaaatttgttaaaaatgtagaacttcaaacccta-taccagaacacctgaatcatttctgcattttaacaatatcct--ccaggtgattcagacattggt---taaggtttgaaaagcactgTTTTAAGTGATCTT-GGAAATAACTTCTGATCTTAAAAATATATGAGCTAAAATATGTGT i otoGar3.GL873528 C 0 I 267 s mm10.chr16 78148441 182 + 98207768 AAGTTTCAgggtgcttgttaggaatgcatcatcttgagcttca-c-ccaacacctctaaattactcctgccttctaacaatgtact--tcaggttagtcctatatgtgt---taaagtttgaaa--cactgTCTTGAATGTGATTGGAAAAAAACTTCCAACCATAATAATATATGAGCTAAGAtgtgcgt i mm10.chr16 C 0 I 52 s canFam3.chr31 13850359 176 + 39895921 cagcacctggg-gcttgttagaaatgcaggatctcaggcc----t-gaagagta-ctgaaacacttctgcattttaacaatattc---ccaggtaatgtgtatatgcac---tgaagtttgaaaagcactATTTTAGATGATCTT-G-AAATAGCTTCTAATGTTAAGAATGTGTGAGTTAAAATGGGTGT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3652301 186 - 6883506 cattatctgggcactcgttagaaatgcagaatttcaggccctagt-ccagacctactgaattatttctgcattttagcaatatcatcaccagatgatttctgtatgcaa---taaagtttgaaaagcacCATTTTAAATGATCTT-GGCAATACTTTCTAATCATACAAATGTATAAACTAAAATATGTAT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e calJac3.chr21 21964822 4 + 50472720 I a score=1006880.000000 s hg38.chr21_KI270874v1_alt 118667 83 + 166743 GTTTTAATGAAATCA----------GGGGTATAT--TATTATTCAAAGTAATTCCAGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAAC s panTro5.chr21 3744279 83 + 33445071 GTTTTAATGAAATCA----------GGGGTATAT--TATTATTCAAAGTAATTCCAGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370083 83 + 46275980 GTTTTAATGAAATCA----------GGGGTATAT--TATTATTCAAAGTAATTCCAGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309512 83 - 13858734 GTTTTAATGAAATCA----------GGGGTATAT--TATTATTCAAAGTAATTCCAGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492579 81 + 32716333 GTTTTAATGAAATC------------GGGTATAT--TATTATTCAAAGTAATTCTGGTGTGAATCTTTCC--AAAGTGAAGAATCTCTTTTAAAAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447717 83 - 185818997 GTTTAAATGAAATCA----------GGGCTATAT--TATTATTCAAAGTAATTCTGGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272013 83 - 192294377 GTTTAAATGAAATCA----------GGGCTATAT--TATTATTCAAAGTAATTCTGGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753012 83 + 9440265 GTTTAAATGAAATCA----------GGGCTATAT--TATTATTCAAAGTAATTCTGGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482210 83 + 21915920 GTTTAAATGAAATCA----------GGGCTATAT--TATTATTCAAAGTAATTCTGGTGTGAAACTTTTC--AAAGTGAAGAATCTCTTTTAGAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057000 83 - 90373283 GTTTAAATGAAATCA----------GGGCTATAT--TATTATTCAAAGTAATTCTGGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242396 83 + 4234846 GTTTAAATGAAATCA----------GGGCTATAT--TATTATTCAAAGTAATTCTGGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAGAAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240528 83 - 13750039 GTTTAAATGAAATCA----------GGGCTATAT--TATTATTCAAAGTAATTCTGGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAAC i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5058037 82 + 13128814 GTTCAAATGAAATC-----------GGGGTATAT--TATTATTTAAAGTAATTCTGGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634786 82 - 14377064 GTTCAAATGAAATC-----------AGGGTATAT--TATTATTTAAAGTAATTGTGCTGTGAATCTTTAC--AAAGTGAAGAATCTCTTTTAAAAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8773108 83 + 9889416 GTTCAAATGAAATCA----------GGGGTATAT--TATTATTTAAAGTAATTCTGGTGTGAATCTTTTC--AAAGTGAAGAATCTCTTTTAAAAAC i aotNan1.NW_018487195v1 C 0 I 303 s micMur3.chr31 19224922 84 + 47401472 --TTAAATGACATCG----------AGGGTATATATTATTATTCAAAGTAATTCTGCTGTGAATATTTTCAAAAAGTGAAAAATCCCCTTTAAAAC- i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20775865 86 - 38779656 GTTTCAATGACACCA----------AAGGCATGTAATATTATTCAAAGTAATTCTGGTGCAAATATTTTTAAAAAGTAAAAAATCCCTTTTAAAAC- i otoGar3.GL873528 I 267 C 0 s mm10.chr16 78148675 84 + 98207768 gtTTAAATAATACCA----------AGGGGGTAT--TATCCCTCAAAGTAACTTGGGTATGGGTATTTTTATAAAGTGTTAAATCCCTTCTAACAC- i mm10.chr16 I 52 C 0 s canFam3.chr31 13850535 82 + 39895921 GTTTAAATGGTATCA----------AGAGTATCT--TAGTATTCAAAGTAATTCTGTTGTGAATATTTTCATAAAGTGAAGAATCTC--TTAAAAT- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3652487 92 - 6883506 GCTTAAATAACACCAAGTGTCACATAGAGTATCT--CACTATTCCAAGTAATTCTGGTGTGACTATTCAT--AGAATGAAGAATCTTTAAGAAAAC- i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e calJac3.chr21 21964822 4 + 50472720 I a score=17290.000000 s hg38.chr21_KI270874v1_alt 118750 1 + 166743 A s panTro5.chr21 3744362 1 + 33445071 A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370166 1 + 46275980 A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309595 1 - 13858734 A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492660 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447800 1 - 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272096 1 - 192294377 A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753095 1 + 9440265 A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482293 1 + 21915920 A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057083 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242479 1 + 4234846 A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240611 1 - 13750039 A i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5058119 1 + 13128814 A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9634868 1 - 14377064 A i cebCap1.NW_016107322v1 C 0 I 306 s aotNan1.NW_018487195v1 8773494 1 + 9889416 a i aotNan1.NW_018487195v1 I 303 C 0 s micMur3.chr31 19225006 1 + 47401472 A i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20775951 1 - 38779656 A i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148759 1 + 98207768 A i mm10.chr16 C 0 C 0 s canFam3.chr31 13850617 1 + 39895921 A i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3652579 1 - 6883506 A i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e calJac3.chr21 21964822 4 + 50472720 I a score=50694.000000 s hg38.chr21_KI270874v1_alt 118751 4 + 166743 AATT s panTro5.chr21 3744363 4 + 33445071 AATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370167 4 + 46275980 AATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309596 4 - 13858734 AATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492661 4 + 32716333 AATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447801 4 - 185818997 AATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272097 4 - 192294377 AATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753096 4 + 9440265 AATG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482294 4 + 21915920 AATG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057084 4 - 90373283 AATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242480 4 + 4234846 AATG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240612 4 - 13750039 AATT i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5058120 4 + 13128814 AATT i saiBol1.JH378168 C 0 I 302 s cebCap1.NW_016107322v1 9635175 4 - 14377064 AATT i cebCap1.NW_016107322v1 I 306 C 0 s aotNan1.NW_018487195v1 8773495 4 + 9889416 aaTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19225007 4 + 47401472 AATT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20775952 4 - 38779656 AATT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148760 4 + 98207768 AATG i mm10.chr16 C 0 C 0 s canFam3.chr31 13850618 4 + 39895921 AATT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3652580 4 - 6883506 AATT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e calJac3.chr21 21964822 4 + 50472720 I a score=199243.000000 s hg38.chr21_KI270874v1_alt 118755 14 + 166743 ATCTCCAATCTATT s panTro5.chr21 3744367 14 + 33445071 ATCTCCAATCTATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370171 14 + 46275980 ATCTCCAATCTATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309600 14 - 13858734 ATCTCCAATCTATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492665 14 + 32716333 ATCTCCAATCTATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447805 14 - 185818997 ATCTCCAATCTATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272101 14 - 192294377 ATCTCCAATCTATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753100 14 + 9440265 ATCTCCAATCTATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482298 14 + 21915920 ATCTCCAATCTATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057088 14 - 90373283 ATCTCCAATCTATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242484 14 + 4234846 ATCTCCAATCTATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240616 14 - 13750039 ATCTCCAATCTATT i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5058426 14 + 13128814 aTCTCCAATTTATT i saiBol1.JH378168 I 302 C 0 s cebCap1.NW_016107322v1 9635179 14 - 14377064 ATCTCCAATTTATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8773499 14 + 9889416 ATCTCCAATTTATT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19225011 14 + 47401472 ATCTCCAATTTATC i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20775956 14 - 38779656 ATATCCCATTTACT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148764 14 + 98207768 ATCTCCTATTTATC i mm10.chr16 C 0 C 0 s canFam3.chr31 13850622 14 + 39895921 ATCTCCAATTTATC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3652584 11 - 6883506 ---ACCAAACTGTT i dasNov3.JH568778 C 0 I 41487 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e calJac3.chr21 21964822 4 + 50472720 I a score=904197.000000 s hg38.chr21_KI270874v1_alt 118769 85 + 166743 TTGGATATTAATAGGG-ATTTGTTTGTACATGGACTTCCTATTGTATAAGATGAGGTCAATATAGGAATCATGGAAGCAAGAGTGT s panTro5.chr21 3744381 85 + 33445071 TTGGATATTAATAGGG-ATTTGTTTGTACATGGACTTCCTATTGTATAAGATGAGGTCAATATAGGAATCACGGAAGCAAAAGTGT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370185 85 + 46275980 TTGGATATTAATAGGG-ATTTGTTTGTACATGGACTTCCTATTGTATAAGATGAGGTCAATATAGGAATCACGGAAGCAAGAGTGT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309614 85 - 13858734 TTGGATATTAATAGGG-ATTTGTTTGTACATGGACTTCCTATTGTATAAGATGAGGTCAATATAGGAATCACGGAAGCAAAAGTGT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492679 85 + 32716333 TGGGGTATTAACAGAG-ATTTGTTTGTACATGGACTTCCTATTGTATAAGATGAGGTCAATATAGGAATCAAGGAAGCAAAAGCGT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447819 85 - 185818997 TTGGGTGTTAATAGGG-ACTTGTTTGTGCATGAACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272115 85 - 192294377 TTGGGTGTTAATAGGG-ACTTGTTTGTGCATGAACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753114 85 + 9440265 TTGGGTGTTAATAGGG-ACTTGTTTGTGCATGAACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482312 85 + 21915920 TTGGGTGTTAATAGGG-ACTTGTTTGTGCATGAACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057102 85 - 90373283 TTGGGTGTTAATAGGG-ACTTGTTTGTGCATGGACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242498 85 + 4234846 TTGGGTGTTAATAGGG-ACTTGTTTGTGCATGAACTCCCTATTGTATAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240630 85 - 13750039 TTGGGTGTTAATAGGG-ACTTGTTTATGCATGGACTCCCTATTGTGTAAGATGAGGTCCATATAGGAATCAAGGAAGCAAAAGTGT i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5058440 85 + 13128814 TTGGATTTTAATAGGG-TTTTTTTGGTACATGGAATTCCTATTGCATAAAGTGAGGTCAATATAGGAAACAAGAAAGCCAAAACGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9635193 86 - 14377064 TTGGATATTAATAGGGATTTTTTTTGTACATGGAATTCCTATTGTATAAAATGAGGTCAATATAGGAAGCAAGAAAGCCAAAGTGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8773513 86 + 9889416 TTGGATAATAATAGGGATTTTTTTTGTACATGGAATTCCTATTGTATAAAATAAGGTCAATATAGGAATCAAAAAAGCCAAAGTGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19225025 85 + 47401472 TTAGTTGTCAATAGAG-AATTTTTTGTATATTAACTTCCTATTGCATAAGAGGAAGCCAATATAGGAATCACAGAAGCAGAAGTGT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20775970 83 - 38779656 TTAGGTGT-AATAGGG-AA-TTTTTGTATATGAACATCCTATTGCCTAAGATGAGGCCAATACAGGAATCACAGAAGAAGAAGTGG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148778 75 + 98207768 GTAGATGAAAATAGAA-GATT-TCTGTAAGTCGACTTTCTGTTGCATAA---------CGCTCAAGAACCAAAGGAAAGCAAGCAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13850636 84 + 39895921 TTAGGTGTCAATGGGG-AATT-CTCATACATGGATTTTATATTATATAAGATAGGGCCAATCTAGAAATCATAGAAGTAGAAGCAT i canFam3.chr31 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e dasNov3.JH568778 3652595 41487 - 6883506 I e calJac3.chr21 21964822 4 + 50472720 I a score=5400375.000000 s hg38.chr21_KI270874v1_alt 118854 427 + 166743 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCTTAGAGAAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGT--TGTTTGTACACTCTACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGA-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACCG----TCTTTAAAG-CC-----AGAAGACTATCCATGAATTTAGAG s panTro5.chr21 3744466 427 + 33445071 GAAGAAATAAAA--TGCCTTCAAAAGAATACACTGAACAAGCAATACATAAATTGCTTTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCTTAGAGAAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGT--TGTTTGTACACTCTACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGA-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATATTCAAACCG----TCTTTAAAG-CC-----AGAAGACTATCCATGAATTTAGAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370270 427 + 46275980 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCTTAGAGAAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGT--TGTTTGTACACTCTACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGA-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAATCG----TCTTTAAAG-CC-----AGAAGACTATCCATGAATTTAGAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3309699 427 - 13858734 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCTTAGAGAAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGT--TGTTTGTACACTCTACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGA-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACCG----TCTTTAAAG-CC-----AGAAGACTATCCATGAATTTAGAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4492764 426 + 32716333 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAAGACATGAATTGCTTCTATTTAGAAATT----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTCAATTCAGTAAGATGTTGGGTGAAATTACCTTT-CACTATTTATAAACAAAGATAACAC-TAT--ATTA---ATTCCAAAT-AAGAATT-T-TTCATTCTTAGAGAAAAGCATTATTTTACAAATTTTCAGGTCTCTATTTACACCCAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGCTTGTACACTCTACTAATTG---AATTCCACCACATTGG--AATAAA--GTAACTTAAAAAAGACCACCATTTGGGTTACTTGTTTGGCGGGCCGGGCCACAAAAAAATAATCAAACTG----TCTTTAAAACCC-----AGAAGACTATCC-TGAATTTAGAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155447904 425 - 185818997 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAATG----------------CATTAGTTTAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGCGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCTTAGAGAAAAGCATTATTTTACACATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CC-----AAAAGACTGTCCATGAATTTAGAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272200 419 - 192294377 GAAGAAATAAAA--TGCCTTCAAAAGAATA-ATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAA-----TTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCTTAGAGAAAAGCATTATTTTACACATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CC-----AGAAGACTGTCCATGAATTTAGAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753199 425 + 9440265 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTTTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCTTAGAGAAAAGCATTATTTTACACATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CC-----AGAAGACTGTCCATGAATTTAGAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482397 425 + 21915920 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTCTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCCTAGAGAAAAGCATTATTTTACACATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAACGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CC-----AGAAGACTGTCCATGAATTTAGAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057187 425 - 90373283 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTCTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TAC--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCTTAGAGAAAAGCATTATTTTACAAATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTATACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CC-----AGAAGAGTGTCCATGAATTTAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2242583 425 + 4234846 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTCTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCCTAGAGAAAAGCATTATTTTACACATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAACGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CC-----AGAAGACTGTCCATGAATTTAGAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 240715 425 - 13750039 GAAGAAATAAAA--TGCCTTCAAAAGAATACATTGAACAAGCAATACATAAATTGCTCTTATTTAGAAATG----------------CATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAAACAAAGATAACTC-TAT--ATTA---ATTCCAAAT-AAAAAAT-T-TTCATTCCTAGAGAAAAGCATTATTTTACAAATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCAACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGGCTGTGCACATAAAAATAATCAAACTG----TCTTTAAAG-CC-----AGAAGACTGTCCATGAATTTAGAG i colAng1.NW_012120598v1 C 0 C 0 s saiBol1.JH378168 5058525 438 + 13128814 GAAGAAATAAAA--TGTCCTCAAAAGAATATATTGAAGAAGCAATACATAAATAACTCTTATTTGGAAATGAACTGGCTCTGTAGTTTATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-TAC----TATAGACAAAGAAAACTC-------TTA---ATTCCAAATAAAAAAAT-ATTTTTTTCTTAGAGAAATGCGTTACTTTACAAATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAACTAGTAATTAAA--GTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGACTGTGCACATAAAAATAATCAAACTG----TCTTT-AAG-CC-----AGAAGACTATCCATGAATTTAGAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9635279 439 - 14377064 GAAGAAATAAAA--TGTCCTCAAAAGAATATATTAAACAAGCAATACATAAAT-GCTCTTATTTGGAAATGTACTGGCCCTGTAGTTTATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTATCTTT-CAC----TATAGACAAATAAAACTC-TTT--ATTA---ATTCCAAAT-AAAAAAT-A-TTTTTTCTTAGAGAAATGCATTATTTTACAAATTTACAAATTTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCAACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTTAAAAGG-CAACATTTGGTTTACTTGGTTTGTCTGACTGTGCACATAAAAATAATCAAACCG----TCTTT-AAG-CC-----AGAAGACTATCCATGAATTTAGAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8773599 436 + 9889416 GGAGAAATAAAA--TGCCCTCAAAAGAATATATTGAACAAGCAGTACATAAATAGCTCTTATTTGGAAATGTACTGGCTCTGTAGTTTATTAGTTCAAAGATGATTTATACAGAATTTATTTTAATTCAGTAAGAAGTTGGGTGAAATTACCTTT-CAC----TATAGACAAAGAAAACTC-TTT--ATTA---ATTCCAAATAAAAAAAA-A---TTTTCTTAGAGAAACGC---ATTTTACAAATTTACAAGTCTCTATTTACACACAAG-TAATTGCTATGTAAGCAAGAGCAAGTATTGTTATGTTTGTACACTCGACTAATTGC-AAATGATTCTTAGCTAGTAATTAAA--GTAACTTTAAAAAGG-CAACATTTGGTTTACTTGGTTTGCCTGACTGTGCACATAAAAATAATCAAACTG----TCTTT-AAG-CC-----AGAAGACTATCCATGAATTTAGAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19225110 443 + 47401472 GAGGAAATAAAA--TGCCCTCAAAAAACTATATTAGATAAGCAATATATAAATTGCCCTTATTTGGAAATGCACTGGATCTGCAGTttattagttcaaagctgatttatacagaatttattttaattcagtcagaagtcaggtgaaattacctttgcactatttatAGACAAGTAAGCCTC-TGTATATTA---ATTCCAAAG-AAAAAAACT-TTTCTTCTTCAAGAAAAACACTATTTTACCAACTTACAAGTCTCTATTTACATACAAG-TAATTGCTATATAAATAAGAGCAAGTATTGTTATGTTTGTATACTTGACTAATTGC-AAATGATTCTTAGCTAA----TAAA--GTAACCGTAAAAAGG-CAACATTTGGTTTACTTGGTTTGTCTGGCTGTGCACAGAAAAATAATAAAAC------TTTTTAAAA-CC-----AGAAGACTATCCATGAATTTAGAC i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20776053 447 - 38779656 GAAGAGACAAAA--TGCTGTCAAAAGAAACTACCAGACAAGCACTGGATAAATTGCTCTTATTTGG-AACGCAGTGGCTCTGCTGTTTATTAGTTCAAAGCTGATTTATGCAGAATGTATTTTAATCCAGTCAGAAGTCA-GTGAAATTACCTTTGCACTATTTATAGACAAGTAACTCTC-TTTCCATTA---ATTCTGAAG-AAAAAAA-T-TTTCTTCTTCAAGAAAAACATTATTTTACAAATTTGCAAGTCTCTGTTTACACATAAGTTAATTGCTATGTAAGTAAGAGCAAGTATTGTTATGTTTGCACTCTTGActaattgc-aaatgattcttagctagtaattaaa--gtaactttaaaaagg-caacatttggtttacttggtttgcctggctgtgcacagaaaagtaataaaacta----tttttaaaa-tC-----AGAAGACTATCTGCGAATTTAGAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78148853 422 + 98207768 GAAGAAATAAAA--TATTCTTAAAAGAATCTCTGAGGCAAGCTATATATTAATTTCTGTTATTTGGAAACATGCTTG----------CTCAAGTTTCAAACTTGATTACATCAAATTTATTTTTATTTAGTCAGAGTTCAGGAGAAATTCTGTTG-ACCTCTTGATAGATAAAAAAGGTTT-TTA--ACTATGTAATCCTCAT-AA------A-TTTATTTTGAGAAGCACACACTA----ACAAATGTGTGGTCCTCTATTTCCATATACC-TCATTGTTATGTAAGCAAGAATAAGTATTGTTTTGTTTGTTCAGCCTGCCAATAGC-ACATGGTTCTTGACTAACAGTTAAA---TAACTTTATGAAGG-CAGAAG---------TAGCTGTGTGTGGCTGTTCACATAAAAATAATAAAACTAAAATTCTCTTAAA-TG-----AT-AGATTATCTCTGAATTTAAAC i mm10.chr16 C 0 C 0 s canFam3.chr31 13850720 436 + 39895921 GAAGAAATAAAA--TGCTCTCAAAAGAAAATATTAGGGAAGCAATACATAAGTTGCTCTAATTTGAAAATG---CACCTCTACAGTTCATTAGTTCAAAACCGACTTATACAGAATTTATTTTAATTCAGTCTAAAGTTGGGTGAAATTACTTTTGCACTATTTACAGTCAAGTAAGTCTCATAA--GTCA---ATTCCAAAG-AAATAAT-T-TTC-TTCTTAAAGAAAAATATTATTTTTCAAATTTACAAGTCCCTATTTTCATACAAG-TAATTGCTATATAAGCAAGAGCAAGTATTGT-----TTGTACACTCTACTAATTACTAAATGATTCTTAGCTAGTAATTAAA--ATAACTTTAAAAAGG-CAACATTTGGTTTATTTGGTTTGCCTGGCTGTGCACATAAAAACAATAAAA-------ATTTTAAAG-CC-----TGTAAACTATCCATGAATTTAAAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3694082 443 - 6883506 GAAAAAATAAAAGTCACATAAAAAAAAATATATTGGCCAAGCAAAACATAAATAGCTCTTATGT-GAAATGTACTGGCATTGTA---GTTCAATTCAAAGCTAGTTTACTGAGAATTT-TTTTAATCCCATCAGATAGTAGGTGAAATTACCTTTGCTGTGTTTATAGACAAGGAAG-----TAA--ATTA---ATTCAAAAG-AAAAAAT-G-TTTTCTCCTTAAAGAAAAAATTA-TTTACAAACTCAAAAGTCTTTATTTGCATGCAAG-TAATTGCTATACAAGGAAAGGCAACTATTGCTTTATTGGTACTCTCAACTAATTGT-AAATGATTCTTAGCTAGTAATTAAAGTGTATCTCTAAAAAGG-CAATATTTGATTTATTGGGTTTACCTGGTTGTGCACATAAAAATAATAAAACTG------GTTAAAG-TCCCTAAAGTAGGCTTTCTATGAATTCAGAC i dasNov3.JH568778 I 41487 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e calJac3.chr21 21964822 4 + 50472720 I a score=1814843.000000 s hg38.chr21_KI270874v1_alt 119281 134 + 166743 AAGTCTAAATTAGGCTGC-TTTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGGTCCTTTT-AAAGTAC-TTAAGGACTATATTA---TTTCTAGTTTATTGACTTTTAAAACTCTAA s panTro5.chr21 3744893 134 + 33445071 AAGTCTAAATTAGGCTGC-TTTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTATATTA---TTTCTAGTTTTTTGACTTTTAAAACTCTAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370697 134 + 46275980 AAGTCTAAATTAGGCTGC-TTTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTATATTA---TTTCTAGTTTTTTGACTTTTAAAACTCTAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3310126 134 - 13858734 AAGTCTAAATTAGGCTGC-TTTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTATATTA---TTTCTAGTTTATTGACTTTTAAAACTCTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4493190 139 + 32716333 AAGTCTAAATTGGGCTGCTTTTGCTAAATTTTAACTGATTACTTCATTTAAATATCTGTACCTTTTCTTCCCCTAAGATCCTTTTAAAAGTACTTTAAGGACTATATTA---TTTCTAGTTTATTGACTTTTAAAACTCTAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155448329 134 - 185818997 AAGTCTAAATTAGGCTGC-ATTGCTAAGTTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272619 134 - 192294377 AAGTCTAAATTACGCTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753624 134 + 9440265 AAGTCTAAATTAGGCTGC-ATTGCTAAGTTTTAACTGATTAC-TCATTT-AATATCTGTTTATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482822 134 + 21915920 AAGTCTAAATTAGGCTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057612 134 - 90373283 AAGTCTAAATTAGGCTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2243008 134 + 4234846 AAGTCTAAATTAGGCTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCATTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 241140 134 - 13750039 AAGTCTAAATTAGGCTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATATTTTCTTTCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACTACATTA---TTTCTAGTGTATTAAATTTTAAAAATCTAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964826 134 + 50472720 AAGTCTAAATTAGGTTGT-ATTGCTAAATTTTAACTAATTAC-TCATTT-AATATCTGTATCTTTTCTTCCACTAAGATCCTTTT-AAAGTAC-TTAAGGACAATATTA---TTTCTAGTTTATTAACTTTTGAAAATCTAA i calJac3.chr21 I 4 C 0 s saiBol1.JH378168 5058963 134 + 13128814 AAGTCTAAATTAGGTTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-ATTATCTGTATCTTTTCTTCCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACAATATTA---TTTCTAGTTTATTAACTTTTGAAAATCTAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9635718 134 - 14377064 AAGTCTAAATTAGGTTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGATCCTTTT-AAAGCAC-TTAAGGACAATATTA---TTTCTAGTTTATTAACTTTTGAAAATCTAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8774035 134 + 9889416 AAGTCTAAATTAGGTTGC-ATTGCTAAATTTTAACTGATTAC-TCATTT-AATATCTGTATCTTTTCTTCCCCTAAGATCCTTTT-AAAGTAC-TTAAGGACAATATTA---TTTCTAGTTTATTAACTTTTGAAAATCTAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19225553 137 + 47401472 AAGTCAAAATCAGACTGC-ATTGCAAAATTTTAACTGATTAC-TCATTT-AATATCTGAATCTTTTCCTCCCCTAAGATCCTTTG-AAAGAAC-TTACAGACAATATTATCATTTCTAGTTTATGAACTTTTAAAAATCTAG i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20776500 103 - 38779656 AAGTCAAAATCAGACTGC-ATTGCAAAATTTTAACTGATTGC-TCATTT-ACTCCCTGAATCTTTTCTTCCCCTGAGAT-CTTTG-GAAGAAC-CGAAGGACACTCTGA--------------------------------- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78149275 126 + 98207768 AAGGCCAAAGTGGACTGC-ATTACTGAATT----CTAATAAC-TCATTC-CATATCTGAACCTTTTC-----CTGAGAATCTTGG-AAACTAT---GAAGACAGTGTTATGGTTTCTGTTTGGTGAGCTTTGCAAAATCTAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13851156 137 + 39895921 AAATCCAAATTAGACACC-ATTGCTGAATTTTAATTTATTAC-TCACTT-AATATCTGAATCTTTTCTTCTCCAAAGATCCTTCC-AAAGTGC-TTAAGAACAATGTTACCATTCCTATTTTATGAGCTTCTAAATACTTAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3694525 125 - 6883506 AAGTCTAAAATTGGCTGA-ATTGCAGAAT--------AATAT-TCATTC-AATATTTTAATCTTTTCTTCACATAAGATCTTTTG-AAAGTG--TTAACAATGTTATCA---TTTCTATTTTATGAGTTTTTAAAAATCTGA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I a score=1694594.000000 s hg38.chr21_KI270874v1_alt 119415 135 + 166743 ACTAAATAGAGAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----ATAACACCAGTGTCTT--AACCTATATGTGCAACATTTTGTTTTGTAGAGTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA s panTro5.chr21 3745027 135 + 33445071 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----ATAACACCAGTGTCTT--AACCTATATGTGCAACATTTTGTTTTGTAGAGTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370831 135 + 46275980 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----ATAACACCAGTGTCTT--AACCTATATGTGCAACATTTTGTTTTGTAGAGTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3310260 131 - 13858734 ACTAAAT----AGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----ATAACACCAGTGTCTT--AACCTATATGTGCAACATTTTGTTTTGTAGAGTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4493329 135 + 32716333 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTT--AACCTATATGTGCAACATTTTGTTTTGTACAGTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155448463 135 - 185818997 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTT--AACCTATACGTGCAACATTTTGTTTTATAGAGTAAAAACCTTTATGGCTTTAAACAT-CAGTTTTATTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272753 135 - 192294377 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTT--AACCTATACGTGCAACATTTTGTTTTATAGAGTAAAAACCTTTATGGCTTTAAACAT-CAGTTTTATTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753758 135 + 9440265 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTT--AACCTATACGTGCAACATTTTGTTTTATAGAGTAAAAACCTTTATGGCTTTAAACAT-CAGTTTTATTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8482956 135 + 21915920 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTT--AACCTATACGTGCAACATTTTGTTTTATAGAGTAAAAATCTTTACGGCTTTAAACAT-CAGTTTTATTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057746 135 - 90373283 ATTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTT--AACCTATACGTGCAACATTTTGTTTTATAAAGTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2243142 135 + 4234846 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGTCTT--AACCTATACGTGCAACATTTTGTTTTATAGAGTAAAAATCTTTATGGCTTTAAACAT-CAGTTTTATTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 241274 137 - 13750039 ACTAAATAGACAGTATG---------------------------------ACATTTCTGTCAAATCTAAATCAATATCTTGCAT----GTAACACCAGTGCCTTAAAACCTATACGTGCAACATTTTGTTTTATAGAGTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21964960 131 + 50472720 ACTAAAT----AGTATG---------------------------------ACATTTCTATCAAATCTAAATCAATGTCTGACAT----GTAACACCAGTGTCTT--AACCTACACATGCAATATTTTGTTTTGTAGATTAAAAATCTTTATGGCTTTAAACAT-CAGTTTTATTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5059097 135 + 13128814 ACTAAATAGACAGTATG---------------------------------ATATTTCTATCAAATCTAAATCAATGTCTGACAT----ATAACACCAGTGTCTT--AACCTATACATGCAATATTTTGTTTTGTAGATTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9635852 135 - 14377064 ACTAAATGGACAGTATG---------------------------------ACATTTCTATCAAATCTAAATCAATGTCTGACAT----GTAACACCAGTGTCTT--AACCTATAAATGCAATATTTTGTTTTGCAGATTAAAAACCTTTATGGCTTTAAACAT-CAATTTTATTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8774169 135 + 9889416 ACTAAAGAGACAGTATG---------------------------------ACATTTCTATCAAATCTAAATCACTGTCTGACAT----GTAACACCAGTGTCTT--AACCTATACATGCAATATTTTGTTTTGTAGATTAAAAATCTTTATGGCTTTAAACAT-CAATTTTATTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19225690 114 + 47401472 ACTAAATAGAAAGTATG---------------------------------ACATTTCTATCAAATTTAAATCAATCTCCTGCAT----GTAATACCAGTGTTTT--G----------------------TTTGTAGAACAAAAGTCTTTATATGTTTAAACATATAATATTATTA i micMur3.chr31 C 0 C 0 s mm10.chr16 78149401 168 + 98207768 ACTGAGTAGGTAGCgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgCCCAATCAAAAGCAACCTCTGGCAC----ACAAGACTCCTGCCTC--AA-CTACAAGCTCAAAATCTTCTTTTGATAAGCAAAATGGGTTGTCGGTTTAAACAAATAATTTTTTTA i mm10.chr16 C 0 C 0 s canFam3.chr31 13851293 135 + 39895921 ATGAAAT----AGTATG---------------------------------ATATTTCTTTCAAAACTAAATTAATCTCCTGCATGGAAGTAAGACTAGTGTCAT--AACCCATAGTTTCAACGTTTTATGTTGTAAAGCAAAAATCTTTAGAGTTTTAAACAT-ACAATTTATTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3694650 115 - 6883506 ACTAAATAGACAGTATG---------------------------------ATATTTCTATCAAAACTA--------------AC----------CCAATGTCTT--AACCTCTAGAT-CAACATTTTGCTTTGTAAAGCAAAAATCTTTATTGGCTTAAACGTTTAATTTTATTA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e otoGar3.GL873528 20776603 0 - 38779656 C a score=32015.000000 s hg38.chr21_KI270874v1_alt 119550 2 + 166743 CT s panTro5.chr21 3745162 2 + 33445071 CT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370966 2 + 46275980 CT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3310391 2 - 13858734 CT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4493464 2 + 32716333 CT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155448598 2 - 185818997 CT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272888 2 - 192294377 CT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753893 2 + 9440265 CT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8483091 2 + 21915920 CT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057881 2 - 90373283 CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2243277 2 + 4234846 CT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 241411 2 - 13750039 CT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21965091 2 + 50472720 CT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5059232 2 + 13128814 CT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9635987 2 - 14377064 CT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8774304 2 + 9889416 CT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20776603 2 - 38779656 CT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78149569 2 + 98207768 GT i mm10.chr16 C 0 C 0 s canFam3.chr31 13851428 2 + 39895921 CT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3694765 2 - 6883506 CT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1119754 2015 + 2694913 I e micMur3.chr31 19225804 0 + 47401472 C a score=10901600.000000 s hg38.chr21_KI270874v1_alt 119552 771 + 166743 TTTAAGTCCACA-TTGCCTGGTAGGTGTCCTCTGATCATCATCCTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAATGAAAATGCTTTTTTACACATGCCTGAAATTTCAACAGCTA-CTACGGTATTTTCCCTATCTTCCTT--AAAAAAAATTATCATTCAAAATAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTTAGAAAATGA--GTAATTT--------TATTG-TTACGACTGTTATAGC-CCCATGAAAACTATATTTTGCCAATTTCTATTGGCCTGTGTCATTTTATCACATTTAAAATCTATAATCACACTAGCAAATATAATTTTGCCTGACTTTTTAGACAGTCTCTAAACTTAAAAGTTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCAGCATATGCTTTTATTGCATGTAAGTCCTTGG-ACTTTTATATTTATTTCATGTATTTTAAATA-TTTCTTGAAATCAAGAGCGTTAATATTATTAGTAACA----AACATCTG-TG-GTC-A-TTTTCTTCCATTTGTCACATAGCTAATACA---------------------------------------------GAGTATATAGTATTAC-TT-TTG-AGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT s panTro5.chr21 3745164 771 + 33445071 TTTAAGTCCACA-TTGCCTGGTAGGTGTCCTCTGATCATCATCCTTCCAAGAATAACCCGCTTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAATGAAAATGCTTTTTTACATATGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTT--AAAAAAAATTATCATTCAAAATAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTTAGAAAATGA--GTAGTTT--------TATTG-TTAAGACTCTTATAGC-CCCACGAAAACTACATTTTGCCAATTTCTATTGGCCTGTGTCATTTTATCACATTTAAAATCTATAATCACTCTAGCAAATATAATTTTGCCTGACTTTTTAGACAGTCTCTAAACTTAAAAGTTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCAGCATATGCTTTTATTGCATGTAAGTCCTTGG-ACTTTTATATTTATTTCATGTATTTTAAATA-TTTCTTGAAATCAAGAGTGTTAATATTATTAGTAACA----AACATCTG-TG-GTC-A-TTTTCTTCCATTTGTCACATAGCTAATACA---------------------------------------------GAGTGTATAGTATTAC-TT-TTG-AGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17370968 771 + 46275980 TTTAAGTCCACA-TTGCCTGGTAGGTGTCCTCTGATCATCATCCTTCCAAGAATAACCCGCTTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAATGAAAATGCTTTTTTACATATGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTT--AAAAAAAATTATCATTCAAAATAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTTAGAAAATGA--GTAGTTT--------TATTG-TTAAGACTCTTATAGC-CCCACGAAAACTACATTTTGACAATTTCTATTGGCCTGTGTCATTTTATCACATTTAAAATCTATAATCACTCTAGCAAATATAATTTTGCCTGACTTTTTAGACAGTCTCTAAACTTAAAAGTTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCAGCATATGCTTTTATTGCATGTAAGTCCTTGG-ACTTTTATATTTATTTCATGTATTTTAAATA-TTTCTTGAAATCAAGAGTGTTAATATTATTAGTAACA----AATATCTG-TG-GTC-A-TTTTCTTCCATTTGTCACATAGCTAATACA---------------------------------------------GAGTGTATAGTATTAC-TT-TTG-AGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3310393 770 - 13858734 TTTAAGTCCACA-TTGCCTGGTAGGTGTCCTCTGATCATCATCCTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCCTTACAATGAAAATGCTTTTTTACATATGCCTGAAATTTCAACAGCTA-CTACGGTATTTTCCCTA-CTTCCTT--AAAAAAAATTATCATTCAAAATAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTTAGAAAATGA--GTAGTTT--------TATTG-TTACGACTGTTATAGC-CCCATGAAAACTACATTTTGCCAATTTCTATTGGCCTGTGTCATTTTATCACATTTAAAATCTATAATCACTCTAGCAAATATAATTTTGCCTGACTTTTTAGACAGTCTCTAAACTTAAAAGTTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCAGCATATGCTTTTATTGCATGTAAGTCCTTGG-ACTTTTATATTTATTTCATGTATTTTAAATA-TTTCTTGAAATCAAGAGTGTTAATATTATTAGTAACA----AATATCTG-TG-GTC-A-TTTTCTTCCATTTGTCACATAGCTAATACA---------------------------------------------GAGTGTATAGTATTAT-TT-TTG-AGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4493466 772 + 32716333 TTTAAGTCCACA-TTGCCTGGTAGGTGTCCTTTGATCATCATCCTTCCAAGAATAACCTCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAGTGAAAATGCTTTTTTACATATGCCTGAAATTTCAACAGCTA-CTACGTTATTTTCCCTATCTTCCTT--AAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTTAGAAAATGA--GTACTTT--------TATTG-TTACCACTGTTACAGC-CCCATGAAAACTACATTTTGCCAATTTCTATTGGTCTGTGTCATTTTATCACATTTAAAATCTATAATCACTCTAGCAAATATAATTTTGTCTGACTTTTTAGGCAATCTCTAAACTTAAAAGTTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCACCATATGCTTTTATTGCACGTAAGTCCTTGG-ACTTTTATATTTATTTCATGTATTTTAAATA-TTTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACATCTG-TG-GTC-A-TTTTCTTCCATTTGTCACATAGCTAATACA---------------------------------------------GAGTGTATAGTATTAT-TT-TTG-AGTGGCCTTAGGTAA-CATCTCCTTTCTAAATTCCTGAAAGTAATGTTACGACCAGAATTACATACTAAAAAGAGTCCAAGAATACAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155448600 768 - 185818997 TTTAAGTCCACA-TTGCCTGGTAGGTGTCTTCTGATCATCATCTTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTT-AAAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTGTGAATAGAGATTTTCAATTTAGAAAATGA--GTACTTT--------CATTG-TTACCACTGTTACAGC-CCCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCCACATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAAATTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTGGG-ACTTTTATATTTATTTCATGTACTTTAAACA-TTTCTTGAAATCAAGA--GTTAATATCATTAGTAACA----AACATCTG-TC-ATT-A-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTAT-TT-TTG-AGTGACCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAATAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162272890 770 - 192294377 TTTAAGTCCACA-TTGCCTGGTAGGTGTCTTCTGATCATCATCTTTCCAAGAATAACCCCATTTTTAGTCGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTT-AAAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTGTGAATAGAGATTTTCAATTTAGAAAATGA--GTACTTT--------CATTG-TTACCACTGTTACAGC-CCCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCCACATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAAATTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTGGG-ACTTTTATATTTATTTCATGTACTTTAAACA-TTTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACATCTG-TC-ATT-A-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTAT-TT-TTG-AGTGACCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTAGGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8753895 771 + 9440265 TTTAAGTCCACA-TTGCCTGGTAGGTGTCTTCTGATCATCATCTTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTTAAAAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTGTGAATAGAGATTTTCAATTTAGAAAATGA--GTACTTT--------CATTG-TTACCACTGTTACAGC-CCCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCCACATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAAATTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTGGG-ACTTTTATATTTATTTCATGTACTTTAAACA-TTTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACATCTG-TC-ATT-A-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTAT-TT-TTG-AGTGACCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8483093 770 + 21915920 TTTAAGTCCACA-TTGCCTGGTAGGTGTCTTCTGATCATCATCTTTCTAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTT-AAAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTGTGAATAGAGATTTTCAATTTAGAAAATGA--GTACTTT--------CATTG-TTACCACTGTTACAGC-CCCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCCACATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAAATTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTGGG-ACTTTTATATTTATTTCATGTACTTTAAACA-TTTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACATCTG-TC-ATT-A-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTAT-TT-TTG-AGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15057883 768 - 90373283 TTTAAGTCCACA-TTGCCTGGTAGGTGTCCTCTGATCATCATCCTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAAAGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTT-AAAAAAAAA-AATCATTCAAAGTAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTTAGAAAATGA--GTACTTT--------TATTG-TTACCACTGTTACAGC-CCCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCC-CATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAATTTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTTGG-ACTTTTATATTTATTTCATGTATTTTAAATA-TTTCTTGAAATCAAGACTGTTAATATCATTAGTAACA----AACATCTG-TC-ATT-A-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTAT-TT-TTG-AGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2243279 770 + 4234846 TTTAAGTCCACA-TTGCCTGGTAGGTGTCTTCTGATCATCATCTTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAACAAGAAGTTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ACATATCTCTTTTT-----AGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTT-AAAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTGTGAATAGAGATTTTCAATTTAGAAAATGA--GTACTTT--------CATTG-TTACCACTGTTACAGC-CCCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGCCACATTTAAAATCTATAATCACCCTAGCAAATATAATTTTGCCTGACTTTTTAGAGAGTCTCTAAACTTAAAAATTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGCATGTAAGTCCTGGG-ACTTTTATATTTATTTCATGTACTTTAAACA-TGTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACATCTG-TC-ATT-A-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTATAGTATTAT-TT-TTG-AGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGCAAGTAA-GTTACGACCAGAATTACATACTAAAAAGAGTCAAAGAATACAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 241413 770 - 13750039 TTTAAGTCCACA-ATACCTGGTAGGTGTCCTCTGATCATCATCCTTCCAAGAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAACAAGAAGCTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAA---TGTACCC-AAATTGAA----------------------------------------------ACCAGTGTTTATAGTGTAAT-ATAGATCTCTTTTT-----AGCATTACAATGAAAATGCTCTTTTACATTTGCCTGAAATTTCAACAGCTA-CTACAGTATTTTCCCTATCTTCCTT-AAAAAAAAATTATCATTCAAAGTAATTCCAATTTATTTTGGGTATGAATAGAGATTTTCAATTTAGAAAATGA--GTACTTT--------CATTG-TTACCACTGTTACAGC-CCCATGAAAACTACGTTTTGCCAATTTCTATTGGCCTGTGTCATTTTGTCACATTTAAAATCTATAATCACTCTAGCAAATATAATTTTGCCTGACTTTTTAGAGCGTCTCTAAACTCAAAAATTTTC---CAACAGTATGACACACAACTTTAGGGGCACATGCATCATCTGCTTTTATTGTGTGTAAGTCCTTGG-ACTTTCATATTTACTTCATGTATTTTAAATA-TTTCTTGAAATCAAGAGTGTTAATATCATTAGTAACA----AACATCTG-TC-ATT-A-TTTTCTTCCATTTGTCACATAGCTAATAC-----------------------------------------------AGTGTAGAGTATTAT-TT-TTG-AGTGGCCTTATGTAA-CATCTCCTTTCTAAATTCCTGAAAGCAA-GTTACCACCAGAATTACATACTAAAAAGAGTCAAAGAATACAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21965093 753 + 50472720 CTTAAGTCCACACCTGCCTGGTAGATGTCCTCTGATCATCATCCTTCCAAAAATAACCCCATTTTTAGTTGCTATTTCCTATCTACAATAAGAAATTTTTGTGCATATTTTGAAAACTTGGCCTAAAATTAAAATGTTGTACTCAAAATTGAA----------------------------------------------ACCAGTGTTTATACTGTAAT-ACACATCTCTTCTG-----AGCACTACAATGAAAATGCTGTTTTATACATGCCTGAAATTTCCACAGCTT-CTATAATATTTTCTCTATTTTTCTA-AAAAAGAAAT----ACTCAAAGTAATTTCTATTTATTTTGGGTATTAATAGAGATTTTCAATTTAGAAAATAA--CTACTTT--------TATTG-TTACAACTGTTACAGC-CCCATGAAAACTACATTTTGCCAATTTCTGTTAGCCTGTGTCATTTTACCATTTTCAAAATCTATAATCACTCTAGCGAATATAATTTTGCCTGACTTTTCAGACAGCCTCTGAACTT-AAAGTTTTC---CA--------ACATACAACTTTAGGGGCACATGTTGCATATGATTTTATTGCATGTAAGTCCTTAG-ACTTTTATATTTATTTCATGTAA-TTAAATA-TTTCTCGAAATCAAGAGTGTTAATATCATCAGTAACAAACGAACACCTG-TG-GTC-A-TTTTCTTCCATTTGTCACACAGCCAATATA---------------------------------------------GAGTGTATAGTATTAT-TT-TTG-AGTGGCCTCATGTAA-CATCTCCTTT--------------GTAA-GTTATGATCAGAATTACATACCAAAAAGAGTCAAAGAATACAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5059234 779 + 13128814 TTTAAGTCCACA-CTGCCTGGTAGATGTCCTCTGATCACCATCCTTCCAAAAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAATTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAATGTTGTACTCAAAATTGAA----------------------------------------------ACCAGTGTTTATACTGTAAT-ACATATCTCTTTTG-----AGCACTACAATGAAAATGCTGTTTGACACGTGCCTGAAATTTCCACAGCTT-CTATAGTATTTTCTCTATTTTTCTA-AAAAAGAAATGATCACTCAAAGTAATTTCCATTTATTTTGGGTATTAATAGAGATTTTCAATTTAGAAAATAA--GTACTTT--------TATTG-TTACCACTGTTACAGC-CCCATGAAAACTACATTTTGCCAATTTCTGTTAGCATGTGTCATTTTACCATTTTAAAAATCTATAATCACTCTAGCAAATATAATTTTGCCTGACTTTTCAGACAGCCTCTGAACTT-AAAGTTTTC---CAACAGTATGACACACAACTTTAGGGGCATATGTTACATATGCTTTTATTGCATGTAAGTCCTTAG-ACttttatatttatttcatataatttaaata-tttCTTGAAATCAAGAGTGTTAATATCATCAGTAACAAACAAACATCTG-TG-GTC-A-TTTTCTTCCATTTGTCACATAGCCAATATA---------------------------------------------GAGTGTATAGTATTAT-TT-TTG-AGTGGCCTTATGTAA-TATCTCCTTTCTAAGTCCCTGAAAGTAA-GTTACAACCAGAATTACATACCAAAAAGAGTCAAAGAATACAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9635989 776 - 14377064 TTTAAGTCCACA-CTGCCTGGTAGACGTCCTCTGATCATCATCCTTCCAAAAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAATTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAATGTTGTACTCAAAATTGAA----------------------------------------------ACCAGTGTTTATACTGTAAT-ACATATCTCTTCTG-----AGCACTACAATGAAAATGCTGTTTTACGCATGCCTGAAATTTCCACAGCTT-CTATAGTATTTTCTCTATTTTTCTA-AAAAAGAAATGATCACTCAAAGTAATTTCCATTTATTTTGGGTATTAATAGAGATTTCCAATTTAGAAAATAA--GTACTTT--------TATTG-TTACCACTGTTACAGC-CCCATGAAAACTACATTTTGCCAATTTCTGTTAGCATGTGTCATTTTACCATTTTTAAAATCTATAATCACTCTAGCAAATATAATTTTGCCTGACTTTTCAGACAGCCTCTGAAATT-AAAGTTTTC---CAACAGTATGATACACAACTTTAGGGGCACATGTTGCATATGCTTTTATTGCATGTAAGTCCTTAG-ACTTTTATATTTATTTCATGTAATTTAAATG-TTTCTTGAAATCAAGAGTGTTAATATCATCAGCAACAAACAAACATCTG-TG-GTC-A-TTTTCTTCCATTTGTCACATAGCCAATGTA---------------------------------------------GAGTGTATAGTATTAT-TT-TTG-AGTGGCCTTACGTAA--ATCTCCTTTCTGAGTTCCTGAAAGTAA-GTTACGACCAGAATTACATACC--AAAGAGTCAAAGAATACAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8774306 779 + 9889416 TTTAAGTCCACA-CTGCCTAGTAGATGTCCTCTGATCATCATCCTTCCAAAAATAACCCCATTTTTAGTTGCTATTTCCTATCTGCAATAAGAAATTTTTGTGCATATTTTGAAAACTTTGCCTAAAATTAAAATGTTGTACTCAAAATTGAA----------------------------------------------ACCAGTGTTTATACTGTAAT-ACATATCTCTTTTG-----AGCACTACAATGAAAATGCTGTTTTACACATGCCTGAAATTTCCACAGCTT-CTATAGTATTTTCTCTATTTTTCTA-AAGAAGAAATGATCACTCAAAGTAATTTCCATTTATTTTGGGTATTAATAGAGATTTTCAATTTAGAAAATAA--GTACTTT--------CATTG-TTACCACTGTTACAGC-TCCATGAAAACTACATTTTGCCAATTTCTGTTAGCCTGTGTCATTTTACCATTTTTAAAATCTATAATCACTCTAGCAAATATAATTTTGCCTGACTTTTCAGACAGCCTCTGAACTT-AAAGTTTTC---CAACAATATGACACACAACTTTAAGGGCACATGTTGCATATGCTTTTATTGCATGTAAGTCCTTAG-ACTTTTATATTTATTTCATGTAATTTAAATA-TTTCTTGTAATCAAGAGTGTTAATATCATCAGTAACAAACAAACATCTG-TG-GTC-A-TTTTCTTCCATTTGTCACATAGCCAATATA---------------------------------------------GAGTGTATAGTATTAT-TT-TTG-AGTGGCCTTACGTAA-CATCTCCTTTCTAAGTTCCTGAAAGTAA-GTTACGACCAGAATTACACACCAAAAAGAGTCAAAGAATACAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19225804 717 + 47401472 ---AAGTCCACA-TCGCCTTATAAGTGGCCTCTGATCAACATTCTTCCAAGAATGACCTTATTTTTAGTTGCTGTCTCCTGTCT---ACAATAAATTTTGATGTATATTTTGAGAATTTTGCCTAAAATAAAAATGTTGCACCCAAAATTGAA----------------------------------------------AACAGTTCTTATAGTGTAAT-ACAGATCTCTTTTG-----AGCATTACAGTGAAAGTACTGTTTTACACATGCCTGAAATTTCCATAGTTACCTACAGTATTTCCACTACCCTCCCC-AAAAAGACA------------------------------------------------TCAATTTAGAAAATGCATGTGTTTT--------TATTA-TTACCACTGTTGGAAC-ACCATAAAAACTACATTTTGCCAATTTCTATTGGCCTGTGTCATTTTATCATTTTTAAAATCTATAATCGCCATAGTAAATATGATTTCATCTGACTTTTTAGACAGTCTCTGAACTTTAAAGTTTTC---AAACAGTGTGACATACAACTTTAATGATGCATACAGCACATGCACTTATTGCACTTAAGTCTGTGG-ACTTTTACATTTATTTCATGTATTTAAAATC--TTCATTAAATCAGAAATGCTAAGGTCATTAGTAACA----AATGTCTG-CT-GCCCT-TTTTCTTCCATTTTTCACTTATCTAATATA---------------------------------------------CAGTA--------TTT-TT-TTT-AGTGGTCTTATATGA-CATCTACTTTCTAAGTTTCTGAAAGAAA-GTTATGACCAGAATTACACACTAAAAAGAGTTAAAGAATACAT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1121769 726 + 2694913 TTTAAGTCCACA-TTGTCTTGTAAGTGTCTTCTGATCATCATCCTTCCAAGAATGATCTTATTTTTAGTTGCTGTTTCCTGTCTGGAATAATAAGCTTTGGTGTATATTTTGAGAACTTTGCCTAAAATAAAAATGTTGCACCCAAAATTGAA----------------------------------------------ACCAGTTCTTATAGTGTAAT-ACAGATCTCTTTTG-----AGCATTACAATGAAAGTACTGTTCTACCCACGCCTGAAATTTCCATAGTTACCTACAGTATTTCCACTACCCTCCTA-AAAAAGACA------------------------------------------------TCAATTTAGAAAACGCATGTGTTTT--------TGTTA-TTACCACTGTTGGAAC-ACCATAAAAACTGCATTTTGCCAATTTCTATTGGCCTGTGCCATTTTATCATTTTTAAAATCTATAATCACCATAGTAAATATGATTTCATCTGACATTTTAGACAGTCTCTGAACTTTAAAGTTTTC---AAACAGTATGACATACAACTTTAATGGTGCATATAGCACATGCACTTATTGCATTTAAGTCTGTGG-ACTTTTATAATTATTTCATGTATTTAAAATC-TTTCATTATATCAAAAGTGCTAAGGTCATTAATAACA----AATGTCTG-CT-GCCCA-TTTTCTTCCATTTTTCACTTAGCTAATATA---------------------------------------------TAGTAT------TTTT-TT-TTT-AATGGTCTTATGCGA-CATCTCCTTTCTAAGTTTCTGAAAGAAA-GTTATGACCAGAATTACACACTAAAAAGAGTTAAAGAATACAT i proCoq1.NW_012144079v1 I 2015 M 804 s otoGar3.GL873528 20776605 714 - 38779656 TTTCAGTCCACA-TTACCTTGTAGGTGTTCTCTGATCATCGTCCTTCCCAGAGTAATGCTATTTGTAGTTGCTATTTCCTGTCTGCAATAATAAGTTTTGGTGCACATTTTGAGGACTTTGCCTAAAATACAAATGTTGCACCCCAAATTGAA----------------------------------------------ACCAGCTTTTGTAGTGTAAT-GCAGACCTCTTTGG-----ATCATTACCACGAAAATACTGCTTCACACATGCCTGAAATTTCCACAGCTACCTGCAGTATTTCCACTATCCTCCTA-AAAGAGGCA------------------------------------------------TCAGTCTAGAAAATTCATGTCTTTT--------TATTA-TTACCACCGTTGGAAC-ACCATAAAGACTGTGTTTTG-CAATTTCTATGGTCCTGTGTCATTTCATAGTTTTAAAAATCTA-AATCACCATACCAAATGTAATCGCATGTGAC-TTTTACACAGTCTCTGGACTTTAAAGTTTTC---ACACAGTGCGAC--ACAACTTCAGCGGTGCCTATGGCACGTGCCCTTGTTG----------TGTGG-GCTTTTGTATTTATTTCATGTCTTTAAAAATATTTCATTAAATCAAGAGTGCTAAGGTCATGAATAACA----AATGTCTA-CCGGCCAA-TGTTCTTCCATTGTTCATTTAGCCGATACA---------------------------------------------TAGTAT------TTTTGTT-TTT-AGGGGTCTTGTGTGA-CATCTCCTTTCTAAGTTTCTTAAAGAAA-GTAATGAGCAGAATTGCACTCTAACAAGAGTGAAAGAATACAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78149571 767 + 98207768 TTAACATCCACA-TTTTCTTTTTGATATGCTCTGGTTATCCTATTTTAAAAACTA--CCTACTGGGAGTGATTGTTTCATATCTGTAGCAATATAATTTGGTACACATTTTAAGGTCTTTGCGTAGAACAAGAATATTGCGTCCAAAATAGAA----------------------------------------------AGCAACTTTTATTTTAGAGT-GCAGATCTTTTTTTTTTTGAGGATTATGATGGAAGTGCTGTGTTACACGTGCCTGAAATTCCCACAACTA----------ATTCTCTACTCTCTGT-TAGAAAA--------------------------------------------------TTGGTTTAGAAACTGC--ATGTATTATTATAACTATTA-TTGCCACTGTTGGGGTAACCGTGAAAGCTTCATTTTG-CAGTTCCTTCTGACCAACGTTGCTTGCTCATTTTTAAAATCTGTAATCACTCTAGAAAATATAATTTTATGCCACTTTTTAGACAGCTTCCAAATGT-TACATTTGC---AAACCACCCGCCTCAGAACTTCAGTGGTGTACA---CATGAGTTCTTGCTGCACTTAAGCCCTTGA-GTTTCTAGATTTATTTCGTGTATTTAAAATC-TTTCCTTAACTCAGGAGTCCAGAGATCATTAATAACA----AACGTCTGCTG-GCT-A-TTTTCTTCCATTTGTCACAAAGATTATATATATATAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATAATTAG-TTGTTT-AGCAGCACTACATAAGTATCTCCTTTCCAAGGTCCTGGAAGAAA----ATGACCAGACCTACACA--GAGAAGAATTAAGAAACACAA i mm10.chr16 C 0 C 0 s canFam3.chr31 13851430 740 + 39895921 TATAAGTACACA-TTGCCCTGTAGGTGT---------------TTTTCAACAATAACCCCATTTTTAATGGCTGTTTGCTCTCTTCAATGATGGGCTTTGGTGAATACTTTGAGAAATTTGCATAAAA--AAATTATTGCTCAT-AAAGtaaataataaaataattttatagaattatttatGCAATAATAATGACTGCACTAGTTTTTATAATATGATAACAGATTCTTTCTG-----AGTGTCAGA---AAAATGCTGTGTTACA--TGCTTGCAACTTCCACTTATC-------TATTTCCATTACCTTCCTTTAAAACGACA------------------------------------------------TTAATTTACAAAATACATGTATTTT--------TATGA-TTACTACTGCTGGATC-ACCAGAAAACCTGCATTTTGCCGATTTCTATTGGCCTGTGTCATTTTATCATTTTAAAAATCTATAACCACCCTAGCAAATATAATTTCACCTGACTTTTCATACTGCCTCTGAACTTTAAAGTTTTC---AGACAGTGTGACACATAACTTTAGTGAGGCATACAGCATATGCTTTTATTGCATTTAAGCCTTCAGAATTTTTACATTTATTTCATGTATTTAAACTC-TTTCACTAAAT--AGAGACCTAAAGTCATTCAGAACA----AACAT-TC-TG-GCC-ATTTTTCTTCCATCT-----ATAACCAATAAA---------------------------------------------GAGTATATAATATCAC-TTATTT-AGTGGCCTTATTTAA-AATCAACTTTCTAAGTTCCTGAAA-----GTTATGACCAGAATTACACACTAAAAAGAGTTTAAAAATGAAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3694767 688 - 6883506 TTTAAGTACACA--------------GTCCTTCGATCA-------TCTAACAATAACCC-ATTTTTACTGCCTGTTTCCTATCAGCAAGTATAGGCTTTAGTGCATATTTTGTGCATTTTGCATAAAGCAAAAATACTGCATATAAAATAGAA----------------------------------------------ACCAACTTTAGTAGTGTGAT-AAAGATCTTTTTTG-----AGCATTACTACAAAAGTGCTA--GTACATATGCTT---AGTTCCACAGCTA-CCTTA----TTCCACTGTCCTCCTT-TAAAAAAGA--------------------------------------------------CATTTAGAAAATAT--ATTTTTT--------ATTTGATTACCACTGTTGAACC-ACCATAAAAA--ACATTTTGCCCATTTCTCTTGGCCTGTGTCATTTTATTAC-CTAAAAATCTGTAAACACCATTGCAAATATAATTTTGTCTGACATTTTAGACTGCCTCTGAACTT-TAAGTTTTCAAACAACAGCATGAC--ACAATTTTTGTGGCACATACAGTATATGCCTTTATTGCATTTAAGTCCTTTG-ACTTCTATATTTACCTCATACATTTAAAATC-TTTCTTTAAATAAAAAGTTCTAGGGTCAT-AATAATA----AACATCTG-CC-GGCAA-TTTTCTTCTCTGTGTCACATATCCAATA-----------------------------------------------GAGAACATAATATTAT-TT-ATGTAATGGCCTTATGTAA-CATCACCTTTCTAACTTACTGAAA-----GTTATGACCAGAA-TACACACTAAAAAGAGTTAAAGAACACAT i dasNov3.JH568778 C 0 C 0 a score=9690336.000000 s hg38.chr21_KI270874v1_alt 120323 659 + 166743 TACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAAATGAGACCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGGGGAGGGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTTG----TAGTTTAACAGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAA------TTTTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCACATTTTGGGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACACT----------------CTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATTAAATCT---GT-ATATTT-TTAAATGGAAAAATTGTGAGAATACCAACATAACAACAGGTTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTACGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAG-GGGGGGAAAGA-----------CTG-----CC-----TTTTTTCTTGTACA-TTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGA s panTro5.chr21 3745935 663 + 33445071 TACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAAATGAGACCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGGGGAGGGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTTG----TAGTTTAACAGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAA------TTTTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCACATTTTGAGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACACT----------------CTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATTAAATCTGTAGT-ATATTT-TTAAATGGAAAAATTGTGAGAATACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTACGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGGGAAAGA-----------CTG-----CC-----TTTTTTCTTGTACA-TTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17371739 663 + 46275980 TACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGGGGAGGGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTTG----TAGTTTAACAGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAA------TTTTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCACATTTTGAGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACACT----------------CTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATTAAATCTGTAGT-ATATTT-TTAAATGGAAAAATTGTGAGAATACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTACGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGGGAAAGA-----------CTG-----CC-----TTTTTTCTTGTACA-TTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3311163 663 - 13858734 TACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGGGGAGGGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGCGCTTG----TAGTTTAACAGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAACAAA------TTTTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCACATTTTGAGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTTGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACACT----------------CTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATTAAATCTGTAAT-ATATTT-TTAAATGGAAAAATTGTGAGAATACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTACGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGAGGAAAGA-----------CTG-----CC-----TTTTTTCTTGTACA-TTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4494238 664 + 32716333 TACCTACTTCTATAAATGGATAATTTTATAGTAATCTAAATAAAGATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGAG-TTAAAGGTAAACAGTGCTTG----TAGTTTAACAGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAA------TTGTCTTCAGATTGCTTATGCTGTGTAAATATTACCTCAGATAAGGGCCATATTTTGAGTAAATAAGTCT------GCATAAACATAAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAAATTCAAACCACAATTCCCCATAACACATT----------------CTATAAAATGGTATTCATGACTTCATA-CAGCGAGGATGATGTTTTCCTTTATAAATGCCACATAAAATCTGTAGT-ATATTT-TTAAATGGAAAAATTGTGAGAATACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTATGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGACGGGGGGAAGA-----------CTG-----CC-----TTTTTTCTTGTACATTTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155449368 663 - 185818997 TACCTACTTCTATAAATGGATACTTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTT-----CAGTTTAACCGTTGTCTCTTA-GGGCAGTGTTTTATGAAGATCTTTCAGAAAATAAA------TTTTCTTCAGATTCCTTATGCTGCGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAACATCAGGCTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACT----------------CTATCAAATGGTATTCATGACTTCATA-TAGCAAGGATGATGTTTTCCTTTATACATGCCACATAAAATCTGGGGT-ATATCT-TTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGCGAAAGA-----------CTG-----CC-----TTTTTTCTTGTACATTTGTCTGTGGAACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACGACTTTAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162273660 663 - 192294377 TACCTACTTCTATAAATGGATACTTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTT-----CAGTTTAACCGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAATAAA------TTTTCTTCAGATTCCTTATGCTGCGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAACATCAGGCTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACT----------------CTATCAAATGGTATTCATGACTTCATA-CAGCAAGGATGATGTTTTCCTTTATACATGCCACATAAAATCTGGGGT-ATATCT-TTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGCGAAAGA-----------CTG-----CC-----TTTTTTCTTGTACATTTGTCTGTGGGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATTTGCATAGGACGACTTTAGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8754666 663 + 9440265 TACCTACTTCTATAAATGGATACTTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTT-----CAGTTTAACCGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAATAAA------TTTTCTTCAGATTCCTTATACTGCGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAACATCAGGCTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACT----------------CTATCAAATGGTATTCATGACTTCATA-CAGCAAGGATGATGTTTTACTTTATACATGCCACATAAAATCTGGGGT-ATATCT-TTAAATGGAAAAACTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGCGAAAGA-----------CTG-----CC-----TTTTTTCTTGTACATTTGTCTGTGGGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACGACTTTAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8483863 663 + 21915920 TACCTACTTCTATAAATGGATAATTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTT-----CAGTTTAACCGTTGTCTCTTA-GGGCACTGTTTTAGGAAGATCTTTCAGAACATAAA------TTTTCTTCAGATTCCTTATGCTGCGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAACATCAGGCTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACT----------------CTATCAAATGGTATCCATGACTTCATA-CAGCAAGGATGATGTTTTCCTTTATACATGCCACATAAAATCTGGGGT-ATATCT-TTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAAGGGCGAAAGA-----------CTG-----CC-----ATTTTTCTTGTACATTTGTCTGTGGGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACGACTTTAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15058651 669 - 90373283 TACCTACTTCTATAAATGGATAATTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGTTT-----CAGTTTAACCGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAATAAA------TTTTCTTCAGATTCCTTATGCTGTGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCTGCATAAGCATAAGCATCAGACTGCTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATTCCCCATAACACACT----------------CTATCAAATGGCATTCATGACTTCATA-CAGCAAGGATGATGTTTTCCTTTATAAATGCCACATAAAATCTGGGGT-ATATTT-TTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTCAGAGGGGGGAAAGA-----------CTG-----CC-----TTTTTTCTGGTACATTTGTCTGTGTGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2244049 679 + 4234846 TACCTACTTCTATAAATGGATAATTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTCTGG-AATGCTAAGCAGTGTTGAGGAGTGAGTTAATAAGAAAGACAG-TTAAAAGTAAACAGTGCTT-----CAGTTTAACCGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAATAAA------TTTTCTTCAGATTCCTTATGCTGCGCAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAACATCAGGCTACTTTATGTTG---------GTATCCTTAGTTTTTCTGTTTTAATTCAAACTTCAAACCACAATTCCCCATAACAAATTGTGGGGAATTCTATGACTATCAAATGGTATTCATGACTTCATA-CAGCAAGGATGATGTTTTCCTTTATACATGCCACATAAAATCTGGGGT-ATATCT-TTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGCGAAAGA-----------CTG-----CC-----ATTTTTCTTGTACATTTGTCTGTGGGACTTTCT--------GT------GGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACGACTTTAGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 242183 663 - 13750039 TACCTACTTCTATAAATGGATAATTTTATAGTAACCTAAATAAAAATGAGAGCAGAATAAATATTTTTCTAGCCTTCTTTGG-AATGCTAAGCAGTGCTGAGGAGTGAGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTT-----TAGTTTAACCGTTGTCTCTTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAATAAA------TTTTCTTCAGATTCCTTATGCTGTGTAAATATTCCCTCAGATAAGGGCCATATTTTGAGTCAATAAGTCT------GCATAAGCATCAGACTGCTTTATGTTG---------GTATCCGTAGTTTTTCTGTATTAATTCAAACTTCAAACCACAATT-CCCGTAACACACT----------------CTATCAAATGGTATTCATGACTTCATA-CAGCAAGGATGATGCTTTCCTTTATAAATGCCACATAAAATCTGGGGT-ATATTT-TTAAATGGAAAAATTGTGAGAACACCAACATAACCACAGATTGCCCTCCATCCTTTGTCCAATAAATTTCTAAGTTTGCGTTTTTACTATCTGACAGAAATACTTTACAGTCTTGAGAGGGGGGAAAGA-----------TTG-----CC-----TTTTTGCTTGTACATTTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21965846 664 + 50472720 TACCTACTACTATAAATTGATAATTTTATGGTAATCTAAATTAAAATGAGAGCAGAATAAATATTTTTCTGGCCTTCTCTGG-AATGCTTAGCAGTGCTGAGCAGTGGGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTGCTTG----CCGTTTAATAGTTGTCTCCTA-GGGCACTGTTTTATGAAGATCTTTCAGAAAAGAAA------TTTTCTTCAGATTGTTTATGCTGTGTAAATATTGCCTCAGATAAATGCCATATTTTGACTAAATAAGTCT------GCATAAACATAAGACTGTTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAGAATTCAAACCACAATTCCCCATAACACGCT----------------CTATAAAACAGTATTTATGACTTCATA-CAGGGGGGATGATATTTTCCTTTATAAATGCCACACAAAACCTGTGGt-atattt-ttaaataaaaaaataGTGAGAATACCAGCATAACCACAGATTGCCCTCCATCCTCTGTCCAATATA-TCCTAACTTTAGGTTTTTACTATCTGACAGAAACCCTTTACAGTCTTAAGATGAGGGAAAAT-----------CAG-----CC-----TTTTTTCTTGTACATTTGTCTCTGTGACTTTCT--------AC------TAAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5060013 662 + 13128814 TACCTACTACTATAAATTGACAATTTTACAGTAATCTAAATAAAAATTAGAGCAGAATAAATATTTTTCTGGCCTTCTCTGG-AATGCTTAGCAGTGCTGAGGAGTGGGTTAATAAGAAAGAGAGTTTAAAAGTTAACACTGCTTG----TAGTGTAATAGTTATCTCTTA-AGGCACTGTTTTATTGAGATCTTTCATAAAAGAAA------TTTTCTTCAGATTGTTTATGCTGTATAAATATTACCTCAGATAAATGCCATATTTTGACTAAATAAGTCT------GCGTAAACATAAGACTGTCTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAGAATTAAAACCACAATTCCCCATAACACACA----------------CTATAAAATAGTATTCATGACTTCATA-CAGGGAG---GATATTTTCCTTTATAAATGCCACATAAAATCTGTGGT-ATATTT-TTAAATGGAAAAATAGTGAGAATACCAGCATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTCAGGTTTTAACTATCTGACAGAAACCCTTTAGAGTCTTGAGATGAGGAAAAAT-----------CAG-----CG-----TTTTTTCTTGTACATTTGTCTGTGTGACTTTCT--------GC------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9636765 652 - 14377064 TATCTACTACTATAAATTGATAATTTTATAGTAATCTAAATAAAAATGAGAGCAGAATAAACATTTTTCTGGCCTTCTCTGG-AATGCTTAGCAGTGCTGAGGAGTGGGTTAATAAGAGAG-----TTAAAAGTAAACAGTGCTT------------ATAGCTATCTCTTA-AGGCACTGTTTTATGAAGATCTTTCAGAAGAGAAA------TTTTCCTCAGATTGTTTATGCTGTGTAAATATTACCTCAGATAAATGCCATATTTTAACTAAATAAGTCT------GCATAAACATAAAACTGTTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAGAATTCAAACCACAATTCCCCATAACACACT----------------CTATAAAATAGTATTCATGACTTCATA-CAGGGAGGATGATATTTTCCTTTATAAATGCCACATAAAATCTGTGGT-ATATTT-TTAAATGGAAAAATAGTGAGAATACCAGCATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTCAGGTTTTTACTATCTGGCAGAAACCCTTTACAGTCTTGAGATGAGGGAAAAT-----------CAG-----CC-----TTTTTTCTTGTACATTTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTGTCAAGGACATTAAAATTTATATCTGCATAGGACAAGTTTAGG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8775085 662 + 9889416 TACCTACTACTATAAATTGATAATTTTATAGTAATCTAAATAAAAATGATAGCAGAATAAATATTTTTCTGGCCTTCTCTGG-AATGCTTAGCAGTGCTGAGGAGTGGGTTAATAAGAAAGAGAG-TTAAAAGTAAACAGTG-TCG----TAGTTTAATAGTTGTCTCTTA-GGGCACTGTTTCATGAAGACCTTTCAGAAAAGAAA------TTTTCTTCAGACTGTTTATGCTGTGTAAATATTGCCTCAGATAAATGCCATATTTTGACTAAATAAATCT------GCATAAACATAAGACTGTTTTATGTTG---------GTATCCTTAGTTTTTCTGTATTAATTCAGAATTCAAACCACAATTCCCCATAACACACT----------------CTATAAAATAGTATTCATGACTTCATA-CAGGGAGGATGATA-TTTCCTTTATAAATGCCACATGAAATCTGTGGT-ATATTT-TTAAATGGAAAAATAGTGAGAATACCAGCATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTCAGGTTTTTACTATATGACAGAAATCCTTTACAGTCTTGAGATGAGGGAAAAT-----------CAG-----CC-----TTTTTTCTTGTACATTTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTATGTATCAAGGACATTAAAATTTATATCCACATAGGACAAGTTTAGG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19226521 666 + 47401472 CACTCACTTCTATAAATAAAT-TTTTTATTATAATCTAAATGAAAATGAGAGCAAAATAAGTATTTTAGTAGCCTTCTCTGG-AATGTTATGC-GAGTTGAGGAGTGGATTAATAAGGAAGAAAG-TTAAAAGTAAACAGTGTTTGTACATAGTTTAATAGTTGTCTCTTA-GGACACTATTTTATGAAGATCTTTTGGAAAAGAAA------TTTTTTTCTGACTGCTTGAACTGTGTAAATGTTACCTCAGACAAATGCCATATTTTGACTAAATAAGTCT------GCATAAACATAAAATTGTTTTATGTTT---------GTGTCCTCAGTTTTTCTACATTGATTCAAACTTCAAGCCACAGTTCCCCCAAACATGCT----------------CTATAAAATAGAATTCATGACTTCATA-CAGAGAGGATGATATTTTCCTTTATAAATGCCACATAAAATCTGTGGT-AAATTT-TTAAATAGAAAAATTGTGAAAATCCTGGCATAACCACAGATTGCCCTCCATCCCCTGTCCAATAAA-TTCTAACTTTAGGTTTTTACTATCTGACAGAAATCCTTTATAGTCTTGAGAAGGGAAAAAG------------CAA-----CCTTTTTTTTTTTCTTGTACATTTGTCTGTGTGACTTTCT--------GT------TGAGAATGTATTGAAGAC----AATATTATAATTTATATCTGCATAGGGAAAGTTTAGA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20777319 666 - 38779656 CGCTCGCTTCTCTAAATGGG-----TTATTATAATCTAAATG-GAATTAGAGCCAAATAAATATTTT-GTAGCCTTCTCTGG-ACGGCTCTGC-GTGTGGAGGAG-GGGTAACTAAGGAAGCACG-TTGAAAGGCAGCAGCACTCAGACACAGTCTCAGAGTTGTCTCTTAGGGATCCTATTTTATGAAGATCTTTTGGAAAAGAAA------TTTTCTTCTGACTGCTTGCACTGTGCAAACATGACCTCAGATAAATGTCATATTTTGACTAAATAAGTCT------GCACAAACATAAATTTGTTTTATGTTG---------GTGTCCATAGGTTTTCTGCATTAATTTAAAACTCAAACCACAGTTCCCCTTCACACGCT----------------CTGTAAAATAGTGTTCATGACTTCATA-CAGCGAGGCTGATATTTTCCTTTATAAATGCCACATAAAATCTGTGGTAAAATTT-TTAAATAGAAAAATTGTGAAAATCCCAATATAACCACAGATTGCCCTCCATCCTCTGTCCAATAAA-TTCTAACTTTGGGTTTTTACTATCTGACAGAAATCCTTTACAGTCTTGAGGAGGAAAAAAG------------CAGCCCACCCCCTTTTTTTCTCTTCTACATTTGTCTGGGAGAATTTCT--------TT------GGAGAATTCATTGAAGAC----AACATTACAATTTATATCTGCATGAGGCAAGTTTAGA i otoGar3.GL873528 C 0 I 175 s mm10.chr16 78150338 653 + 98207768 CGCATACTTCTGTGAATGGGTTGT-TTATGACAATTTAAATGAAGATGAGAGGCAAATGGATGCCCT-CTAGCATCCCCTAGTAATGCTAAGTGATGCTGAGGAGTAGACTAGGTACCAAGAAACTTTAAAGGCAAGAAGTGTTTCTGCACAGACTGACAGTTGCCTCTCA-TGACACTATGTTATAAAAATCCTATGGAAAAG---------TTTCCTTC----TGTTTGTGCTGTGTAAATATTACCTCAGAAAAATGCCATAATTCAGCTAAATAAGTCT------GCATAAACATAGCAGTGTTTTATGTTG---------GTGTGCTCAGTTTTGCTGCGTTAATTCAAAACTCAAACCACGATTCACT-CAACACACT----------------TTATAAAGTACTATTCATAACTTCATGCCATGAAGGATGATATTTTCCTTCATAAATGCCATATAAAATCTGTGGT-AAAATT-TTAAATAGAAAAATTGTGAAAACCCCAACATAACCACAAATTGCCCTCCATCTCTCGCCCAATAAA-TTCTACCTTCAAGTTTTTACTCTGTGACAGAAATCCTTTATGGTCTTAAAA----GCAAAGG-----------TAG-----CC-----TCCTTG--TCTACAGTTGACTGTGGGACTTTCT--------GTATTCCAGGTGAAT--------TGACAACAGTGCTATAATTTTTATCCACATAGGGAAAGTTGATG i mm10.chr16 C 0 C 0 s canFam3.chr31 13852170 679 + 39895921 TGCTCACTTCTATAAATATACTGT-TTATAATAATCTAAATGAAAAT-AAAGCAAAATA-----TTTTCTGACCTTTTCTGG-AGTA-TAAGCAGTGTTAAGGAGTGAGTTAAGAAGAAAG-----TTCAAAGTAAACAGCACTTATACGTGGTTTAATAGTTGTCTCTTA-GGACACTACTTTATGATGATTCTACGGAAAATAAA------TTTTCTTCTGACTGCTTGCACTGGGTAAATATTACCTCAGATAAATACCATATTTTGCCTAAATAAGTCT------GTATAAACATAAGACTGTTTTATGTTGGTTTCCTTAGTTTCCTTAGTTTTTCTGCATTAATTCAAAATTCAAACCACGATTCCCCCTAAAACACT----------------CTATAAAACAGTATTCATGACTTCATA-CAGTGAGTATGATATTTTCCTTTATAAATGCCACGTAAAATCTGTGGT-AAATTC-TTAAATAGAAAAATTGTGAAAATCCCAACATAACCACAGATTGCCCTCCATCCCCTGTCCAATAAA-TTCTAACTTTAGGTTTTTACTATCTGACAGAAATCCTTTACAGTCTTGAGaaaaaaaaaaaaaaaaaaaaaaGCAG-----CC-----TTTTGTTTCTTATG--TGTTTGTGTGACTTTCTCTTTCCCAGT------TGAGAGTGAATTGAGGAT---AAACATTATAAGTCATATCTACATAGGGAAAATTTGAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3695455 679 - 6883506 TACTCATCCCTATAAAAGGGttat-ttataataacataaattaaaataaGTGCAAAGTAAATATTTTTTTA-CCTTATCCAG-GTTACTAATCAGTGTTGAGGAGAGGACTAATAAGAAAGAAAG-TTAAAAGAAAACAAGATTTATATATAGTTTAATAGCTGTCTCTTT-GGACACTATTTCATAAAGATCCTAAAGAAAAAAACAAAAATTTTTCTTCTGACTTCTTGTGCTATATAAATATTACCTCAGAATAATGCCACATTTCTACTAAATTAGTCT------GCATAAATCTCAGACTGTTTTATGTTG---------GTTTCCTCAGCTTTCCTGCATTAATACAAAATTCAAACCATGATTCCCCTTAAAACACT----------------CTATAAAATAGTATTCATGACTTCATA-CAGTGAGGATGATATTTTCCCTTATAAATGCCACGTAAAATCTGTGGT-AAATTTCTTAAATAGAAAAATTGTGAAAATTCCAATGTAACCACAGATTGCCCTCCATGCCCTGTCCAATAAATTTCTAACTTTAGGTTTTTATTATATTTCAGAAATCCTTTACAGTCCTGAGAGGGGGGGAGAT-----------GTC-----TT-----TTGTTTCTGGTTCATTTGTCTGCATAACTTTCTGTTTTCCAGT------TGAGACTGCATTAAGCAT---AAACATTACATTTCATATTTGAACAGGGAAAGTTTTGA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1122495 804 + 2694913 M a score=522414.000000 s hg38.chr21_KI270874v1_alt 120982 35 + 166743 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC s panTro5.chr21 3746598 35 + 33445071 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17372402 35 + 46275980 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3311826 35 - 13858734 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4494902 35 + 32716333 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155450031 35 - 185818997 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162274323 35 - 192294377 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8755329 35 + 9440265 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8484526 35 + 21915920 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15059320 35 - 90373283 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2244728 35 + 4234846 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 242846 35 - 13750039 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21966510 35 + 50472720 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5060675 35 + 13128814 GAGTATATTT--------------------------TCTCCTAAAATAAT-ACTAGGAAAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9637417 35 - 14377064 GAGTATATTT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8775747 35 + 9889416 GAGTATATAT--------------------------TCTCCAAAAATAAT-ACTAGGAAAAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19227187 35 + 47401472 GAGTATATTT--------------------------TTTCTGGAAATAAT-GTTCAGAAAAC i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20778160 62 - 38779656 GGGTACATGTGAATCTCTCTAATTgtggagtgtaaatgtcttaacataataactaagaaaat i otoGar3.GL873528 I 175 I 101 s mm10.chr16 78150991 34 + 98207768 -GGGGTATTT--------------------------TCATCCGAAATCCT-ACCTAGAAAAC i mm10.chr16 C 0 C 0 s canFam3.chr31 13852849 35 + 39895921 GAGTATATTT--------------------------TCTTCAGAAGTAAT-ACTCAGAAAAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3696134 35 - 6883506 GAGTGCATTT--------------------------TCTCCAAAAATAAT-ACTCTGAGAGA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1122495 804 + 2694913 M a score=459532.000000 s hg38.chr21_KI270874v1_alt 121017 35 + 166743 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ s panTro5.chr21 3746633 35 + 33445071 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i panTro5.chr21 C 0 C 0 s panPan2.chr21 17372437 35 + 46275980 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3311861 35 - 13858734 TT-----------AAAAGACAATTTTACCACAT-------------AGAAAGAAAACAT------ i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4494937 35 + 32716333 TT-----------AAAAGAGAATTTGACCACAT-------------AGAAAGAAAACAC------ i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155450066 35 - 185818997 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162274358 35 - 192294377 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8755364 31 + 9440265 TT-----------AAAAGAGAATTTTACCACAT-----------------AGAAAACAT------ i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8484561 35 + 21915920 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15059355 35 - 90373283 TT-----------AAAAGAGAATTTTACCACAT-------------AGGAAGAAAACAT------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2244763 35 + 4234846 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 242881 35 - 13750039 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21966545 35 + 50472720 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5060710 35 + 13128814 TT-----------CAAAGAGAATTTTACCACAT-------------AGACAGAAAACAA------ i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9637452 35 - 14377064 CT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8775782 35 + 9889416 TT-----------AAAAGAGAATTTTACCACAT-------------AGAAAGAAAACAT------ i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19227222 45 + 47401472 TT-----------AAAAGAGAATTTTACCATATAAAAGAATATAAAAGAAACAAAT--------- i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20778323 43 - 38779656 TTAATAAAGAAAAAAAAAAGAATTTCACCATAT-------------AGAAATAAGC--------- i otoGar3.GL873528 I 101 C 0 s mm10.chr16 78151025 35 + 98207768 CT-----------AAAAGAAAATTGTAAGATTC-------------AGAGTGGAAACAA------ i mm10.chr16 C 0 I 4 s canFam3.chr31 13852884 35 + 39895921 TT-----------AAAAGGGAATTTTATCATTT-------------GGGAAGAAAAGAA------ i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3696169 41 - 6883506 TT-----------AAAAAGGACTTTTACCATAC-------------AGAAGGaaaataaattaat i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1122495 804 + 2694913 M a score=6872845.000000 s hg38.chr21_KI270874v1_alt 121052 509 + 166743 GAAAATAAACTTTTGAAATATATGTGTAATTACCAAAAATATGCTGG------AAAC--AACTAATCTTCTGCT---GGAAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCACGAACAAGAGTTTA----GCAAACCTAGAAGG-TTAAATCTTGATTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTT----TC----AATTACCAAAATTAGTAACTGTTACCAAAATATAGGA--ATTCATTTACA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAGTAGATAATCATGCTC-AGACTTATTAAGAGGAAGAAAACCCT-TTGTTGCC-ATT-ACATAGTTGACAACAAAATATCAGTGGAAGATTTTCTTCTT--AAATAAAGCTAA-GGAGAGCAAATAGCTAATATTGCAACTCTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGACTTATACTCTGAAATACATTTATTTAAAAAG s panTro5.chr21 3746668 508 + 33445071 GAAAATAAAA-TTTGAAATATATGTGTAATTACCAAAAATATGCTGG------AAAC--AACTAATCTTCTGCT---GGAAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCACGAACAAGAGTTTA----GCAAACCTAGAAGG-TTAAATCTTGATTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTT----TC----AATTACCAAAATTAGTAACTGTTACCAAAATATAGGA--ATTCATTTACA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAGCAGTAGATAATCATGCTC-AGACTTATTAAGAGGAAGAAAACCCT-TTGTTGCC-ATT-ACATAGTTGACAACAAAATATCAGTGGAAGATTTTCTTCTT--AAATAAAGCTAA-GGAGAGCAAATAGCTAATATTGCAACTCTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGACTTATACTCTGAAATACATTTATTTAAAAGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17372472 508 + 46275980 GAAAATAAAA-TTTGAAATATATGTGTAATTACCAAAAATATGCTGG------AAAC--AACTAATCTTCTGCT---GGAAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCACGAACAAGAGTTTA----GCAAACCTAGAAGG-TTAAATCTTGATTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTT----TC----AATTACCAAAATTAGTAACTGTTACCAAAATATAGGA--ATTCATTTACA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAGCAGTAGATAATCATGCTC-AGACTTATTAAGAGGAAGAAAACCCT-TTGTTGCC-ATT-ACATAGTTGACAACAAAATATCAGTGGAAGATTTTCTTCTT--AAATAAAGCTAA-GGAGAGCAAATAGCTAATATTGCAACTCTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGACTTATACTCTGAAATACATTTATTTAAAAGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3311896 510 - 13858734 GAAAATAAACTTTTGAAATATATGTGTAATTACCAAAAATATGCTGG------AAAC--AACTAATCTTCTGCT---GGAAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCACGAACAAGAGTTTA----GCAAACCTAGAAGG-TTAAATCTTGATTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTT----TC----AATTACCAAAATTAGTAACTGTTACCAAAATATAGGA--ATTCATTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAGTAGATAATCATGCTC-AGACTTATTAAGAAGAAGAAAACCCT-TTGTTGCCTATT-ACAGAGTTGACAACAAAATATCAGTGGAAGATTTTCTTCTT--AAATAAAGCTAA-GGAGAACAAATAGCTAATATTGCAACTCTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGACTTATACTCTGAAATACATTTATTTAAAAAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4494972 508 + 32716333 GAAAATAAAATTTTGAAATATATGTGTAATTACCAAAAATATGCTGG------AAAC--AACTAATCGTCTGCT---GGAAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCATGAACAAGAGTTTA----GCAAACCTAGAAGG-TTAAATCTTAGTTTATATA-----TGTTTTTTATGTT-------AAAATAT--------G---------CTTT----TC----AATTACCAAAATTAGTAACTGTTACC-AAATATAGGA--ATTCATTTAAA-T-AGCCATAA-------AAATATTACATT----TAACTTAATATTGCAGTACTAAAAACAGTAGATAATCATGCTC-AGATTTATTAAGAAGAGGAAAACACT-C--TTGCCTATT-ACATAGTTGACAACAAAATATCAGTGGAAGATTTTCTTCTT--AAATAAAGCTCA-GGAGAGCAAATAGCTAATATTGCAACTGTTATCTAGTTTCAGGTTATATT-GAT----AGTAGCTCCTTAAGCTGACTGACTGATACTCTGAAATACATTTATTTAAAAGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155450101 520 - 185818997 GAAAACAGAATTTTGAAATATATGTGTCATTACCAAACATATGCTGG------AAAC--AACTAATCATCTGCTGGAAAAAAAAAAACAAATAACAGTAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGT-ATGAACAGGAGTTTA----GCAAACCTAAAAGG-TTGAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTTTCAGTC----AATTACCAAAATTAGTAACTGTTACCAAAATATAGGA--ATCCATTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATCGTGCTC-AGACTTATTAAGAAGTGGAAAACCCT-TTGTTGCCTATT-ACGTAGCTGACAACAAAATATCAGTGGAAAATTTTCTTCTT--AAATAAAACTAA-GGAGGGCAAATAGCTAATGTCGCAACTGTTATCTAGTCTCAGGTTATATT-GGTAGTAAGTAGCTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162274393 516 - 192294377 GAAAACAGAATTTTGAAATATATGTGTCATTACCAAACATATGCTGG------AAAC--AACTAATCATCTGCTGGAAAAAAAAAAACAAATAACAGTAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGT-ATGAACAGGAGTTTA----GCAAACCTAAAAGG-TTGAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTTTCAGTC----AATTACCAAAATTAGTAACTGTTACCAAAATATAGGA--ATCCATTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATCGTGCTC-AGACTTATTAAGAAGTGGAAAACCCT-TTGTTGCCTATT-ACGTAGCTGACAACAAAATATCAGTGGAAAATTTTCTTCTT--AAATAAAACTAA-GGAGGGCAAATAGCTAATATCGCAACTGTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i macFas5.chr3 C 0 I 309 s macNem1.NW_012019910v1 8755395 515 + 9440265 GAAAACAGAATTTTGAAATATATGTGTCATTACCAAACATATGCTGG------AAAC--AACTAATCATCTGCTGG-AAAAAAAAAACAAATAACAGTAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGT-ATGAACAGGAGTTTA----GCAAACCTAAAAGG-TTGAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTTTCAGTC----AATTACCAAAATTAGTAACTGTTACCAAAATATAGGA--ATCCATTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATCGTGCTC-AGACTTATTAAGAAGTGGAAAACCCT-TTGTTGCCTATT-ACGTAGCTGACAACAAAATATCAGTGGAAAATTTTCTTCTT--AAATAAAACTAA-GGAGGGCAAATAGCTAATATCGCAACTGTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8484596 514 + 21915920 GAAAACAGAATTTTGAAATATATGTGTCATTACCAAACATATGCTGG------AAAC--AACTAATCATCTGCTGGAAAAAAAAA---AAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATATTATAGTCATGAACAGGAGTTTA----GCAAACCTAAAAGG-TTGAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTTCCAGTC----AATTACCAAAATTAGTAACTGTTACCAAAATATTGGA--ATCCATTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATCGTGCTC-AGACTTATTAAGAAGTGGAAAACCCT-TTGTTGCCTATT-ACATAGCTGACAACAAAATATCAGTGGAAAATTTTCTTCTT--AAATAAAGCTAA-GGAAGGCAAATAGCTAATATCGCAACTGTTATCTAGTCTCAGGTTATAAT-GGT----AGTAGCTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15059390 515 - 90373283 GAAAACAAAATTTTGAAATATATATGTAATTACCAAAAATATGCTGG------AAAC--AACTAATCATCTGCTG--GGGAAAAAAACAAATAACAGTAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCATGAACAGGAGTTTA----GCAAACCTAGAAGG-TAGAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTTTCAGTC----AATTACCAAAATTAGTAACTGTTACCAAAATACAGGA--ATCCATTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATTGTGCTC-AGACTTATTAAGAAGCGGAAAACCCT-TTGTTGCCTATT-ACGTAGCTGACAACAAAATATCAGTGGAAAATTTTCTTCTT--AAATAAACCTAA-GGAGGGCAAATAGCTAATATCGCAACGGTTATCTAGTCTCAGGTTATATT-GGT----AGTAGCTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2244798 514 + 4234846 GAAAACAGAATTTTGAAATATATGTGTCATTACCAAACATATGCTGG------AAAC--AACTGATCATCTGCT---GGAAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATATTATAGTCATGAACAGGAGTTTA----GCAAACCTAAAAGG-TTGAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTTTCAGTC----AATTACCAAAATTAGTAACTGTTACCAAAATATTGGA--ATCCATTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATCGTGCTC-AGACTTATTAAGAAGTGGAAAACCCT-TTGTTGCCTATT-ACATAGCTGACAACAAAATATCAGTGGAAAATTTTCTTCTT--AAATAAAGCTAA-GGAGGGCAAATAGCTAATATCGCAACTGTCATCTAGTCTCAGGTTATAAT-GGT----AGTAGCTCCTTAAGCTGACTGAGTTAAACTCCGAAATACATTTATTTAAAAGG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 242916 511 - 13750039 GAAAACAAAATTTTGAAATATATGTGTAATTACCAAACATATGCTGG------AAAC--AACTAATCATCTGCTG--GGAAAAAAAACAAATAACAATAAATTATATCTATTTTAAATTGAC-TCTGAATGTTATAGTCATGAACAGGAGTTTA----GCAAACCTAGAAGG-TTGAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAA--AT--------G---------TTTTTCAGTC----AATTACCAAATTTAGTAACTGTTACCAAAATATAGGA--ATTCATTTAA----AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTAAAAACAATAGATAATCATGCTC-AGACTTATTAAGAAGCGGAAAACCCT-TTGTTACCTATT-ACATAGCTGACAACAAAATATCAGTGGAAAATTTTCTTCTT--AAATAAAGCTAA-GGAGGGCAAATAGCTAATATCGCAACTGTTATCTAGTCTCAGGTTATATT-GGT----AGTAACTCCTTAAGCTGACTGAGTTAGACTCCGAAATACATTTATTTAAAAGG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21966580 512 + 50472720 AAAAAGACAATTTGGAAATATATGTGTAATTACCAAAAACATGCTGG------AAAC--AACTAATCTTCTGCC--AAAAAAAAAAACAAATAACCATAAATTATATCTATTATAAGTTGAT-TCTGAATGTGATAGTCATTAATAAGAGTTTA----GCAAACCTAGAAGG-TTAAAGCTTGAATTATATA-----TG-TTTTTATGTT-------AAAATAT--------G---------TTTCTCAGTC----AATTACCAAAATTAGTAATTGTTATCAAAATGTAGGA--ATTCATTTAAA-T-AGTTATAA-------AAATATTACATT----TAAC--AATATTGAAGTATTTAAAACAGTAGATATTCATGCTC-AGACTTATTGAGAAGAGGAAAAGCCT-TTGTTGCCTATT-ACGTAGTTTACAACAAAATAACAGTGGAAATTTTTCTTCTT--AAAAAAAGCTAA-GGAGAGCAAATAGCTACTATTGAAACTGTTATCCA-TCTCAGTTTATATT-GGT----GTTAGGTCCTTGAGCTGACTGATTTATACTCTGAAATACATTTATTTCAAGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5060745 520 + 13128814 AAAAATACAATTTTGAAATACATGCGTAATTACCAAAAACATGCTGG------AAAC--AACTAATCTTCTGCTAGAAAAAAAAAAACAAATAACAATAAATTATATCTATTTTAAGTTGAT-TCTGAATGTGATAGTCATGAATAAGGGTTTA----GCAAACCTAGAAGG-TTAAAGCTTGACTTATATATGACTTG-TCTTTATGGT-------AAAATAT--------G---------TTTTTCAGTC----AATTACCAAAATTAGTAACTGTTATCAAAATGCAGGA--ATTCATTTAAA-T-AGCtataa-------aaatattacatt----taacttaatattaaagtatttaaaaCAGTAGATATTCATGCTC-AGACTTATTAAGAA-AGGAAAAGCCT-TTGTTGCCTATT-ACGTAGTTGACAACAAAGTAGCAGTGGAAATTTTTCTTCTT--AAAAAAAGCTAA-GGAGAGCAAATAGCTAATATTGCAACTGTTATCTA-TCTCAGTTTATATT-GGT----GTTAGGTCCTTGAGCTGACTGATTTATACTCTGGAATATATTTATTTCAAAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9637487 501 - 14377064 AAAAATACAATTTTGAAATATATGTGTAATTA----------GTTGG------AAAC--AACTAATCTTCTGCT---AGAAAAAAAACAAATAACAATAAATTATACCTATTTTAAGTTGAT-TCTGAATGTGATAGTCATGAATAAGAGTTTA----GCAAACCTAGAAGG-TTAAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAA--AT--------G---------TTTTTCAGTC----AATTACCAAAATTAGTAATTGTTATCAAAATGTAGGA--ATTCACTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTTAAAACAGTAGATATTCATGCTC-AGACTTATTAAGAAGAAGAAAAGCCT-TTGTTGTCTATT-ACGTAGTTGACAACAAAATATCAGTGGAAATTTTTCTTCTT--AAAAAAAGCTAA-GGAGAGCAAATAGCTAATATTGCAACTGTTATCTA-TCTCAGTTTATATT-GGT----GTTAGGTCCTTGAGCTGACTGATTTATACTCTGAAATACATTTATGTCAAAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8775817 516 + 9889416 AAAAATACAATTTTGAAATATATGTGTAATTACCAAAAACATGCTGG------AAAC--AACTAATCTTCTGCT-AGaaaaaaaaaaaaaaaaacaataaaTTGTATCTATTTTAAGTTGAT-TCTGAATGTGATAATCATGAATAAGAGTTTA----GCAAACCTAGCAGGTTTAAAGCTTGACTTATATA-----TG-TTTTTATGTT-------AAAATGT--------C---------TTTTTCAGTC----AATTACCAAAATTAGTAATTGTTATCAAAATGTAGGA--ATTCATTTAAA-T-AGCTATAA-------AAATATTACATT----TAACTTAATATTGAAGTATTTAAAACAGTAGATATTCATGTTC-AGACTTATTAAGAAGAGGAAAAGCTT-TTGTTGCCTATT-ACGTAGTTGACAACAAAATATCAGTGGAAATTTTTGTTCTT--AAAAAAAGCTAA-GGAGAGCAAATAGCTAATATTGCAACTGTTATCTA-TCTCAGTTTATATT-GGT----GTTAGGTCCTTGAGCTGACTGATTTATACGCTGAAATACATTTATTTCAAAAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19227267 512 + 47401472 GAAAATAAAATTTTGAAATGTATATTTAGTTACCAAAATTATGCTTGAGCCTAAAGC--AGCTAATCTTCTAAT---GAAAAAAA---AAATAACAATAAATAATATCTATTTTATGTTGAC-TTTGAATATTGTAGTCATGAATAAGAGTTTA----TCAAGCCTAGAAGG-TTAAAGCTTGACTTATATA-----TG--TTTTATGTT-------AAAATAA--------A---------GTTTTT--TC----AATTACCAAAATTAGTGATTGTTGCCAAAATGTAGGA--GTTCATTTAAA-T-TGCTACAC-------AAATATGACATT----TAACTGCATACTAAAGTACTACAAGCAGTAGATATTCATAGTCTGGACTGATTAAGAAGAGGAAAACCCTGTTGTCGTATATTAACACAGTTGACAACAAAATAACAGTGGAAGGTTTTCTGCCC--CCAAAAAGACAATGGGGAGCAGCTAGCTAATACCATAATTGTTATCTACTCTAGGTTTATATG-GAT----GGTAGCTCTTTAGGCTGAATG------ACTCTGAACTACATTCATTTAAAAGG i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1123303 517 + 2694913 GAAAATAAAATTTTGAAATGTACATTTAGTTACCAAAAATATGCTGGAGCCTAAAGC--AGCTAATCTTCTAAT---GAAAAAAA--CAAACAACGATAAATAATATCTATCTTAAGTTGAC-TTTGAATATGGTAGTCATGAATAAGAGTTTA----TCAAGCCTAGAAGG-TTAAAGCTCAACTTATACA-----TG--TTTTATGTT-------AAAATAA--------A---------AGTTTT--TC----GATTATGAAAATTAGTGATTGTTGCCAAAATGTAGGA--ATTCATTTAAA-T-TGCTACAC-------AAATATTGCATT----TAACTGCATACTAAAGTATTACAAGCAATAGATATCCATGCTCTGGACTCATTAAGAAGAGGAAAACCCTGTTG-CGTATATT-ACATGGTTGACAACAAAATAACAGTGGAAAGTTTTCTGCCC--AAAAATAGAAAATGGGGAGCAGCTAGCTAATACCATAATCGTTATCTACTCTAGGTTTATATG-GAT----GGTGGCTCCTTAGGCTGAATGACTTACACTCTGAAATACATTCATTTAAAAGG i proCoq1.NW_012144079v1 M 804 C 0 s otoGar3.GL873528 20778366 506 - 38779656 AAAAATAAAATTTTGAAATCTATGTTTAGTTACCAAAAATATGCTGGAGACTAAAGC--AGCTAATATTCCACT---GAAAAAAC---AAATAACTCTAAATGGCATGTATTTTAAATTGAC-TTTCAATATCATAGTCATGAATAAGAGTTTA----TCAAGCCTAGAAGG-TTAAAGCTTGACTTACCTA-----TG--TTTTAGGTT-------AAAATAA--------A---------AGTTT----------------AAAACTGATGATTGCTGCC-AAATATAGGa--atttatttaaa-t-aaataaacatacaaaatatataaCATT----TAACTGCATAC---------AGAAACAGTAGCTACTCAGGCTTAGGACTGATTAAGAAAAGGAAAACCATGTTGTCATATATT-ACACAGTTCATAACAAAGTATCAGTGGAAAGCTTGGTGCCCCTCAAAAAAGACAAGAGGGAGCAGATAACTAATACTATAATTGTTATCAGCTCTAGGTTTATATG-TGT----GGTAGCTTCTTAGGCTGACTGACTTATATTCTGAAATACATTCATTTAAAAAG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78151064 497 + 98207768 GCAAATATAGTGCACGCATACACACATATTTACCAAAAAAAATGTGATTCT--AAAA--AATTAATCTGCTAAA---CAAAACAAGATAACAAACAGTACAT-----------TAAATTGACTTTTAAATGTAACACTCATCAATTACAGAGTA----TCAGTACTGGAAAC-TTGAAGCTTGGGCTACATC-----TG-TGTTAATACTTGAATGCAAATTGA--------G---------AGTTTTAGTC----ATTTATGAAAATT----ATCCTTGCCAAAGGGTAAAATCAAAAATCTAACTT-AGCCATTA-------AAATGTTATATCATTGTTGCTTCATATCAAGATATTAGAAA-AATGTGTATTTATGCTCAAGACTTACTAAAAGGAGAAAACTATG-TTGCTTTATATT-ATATTCTTGAC--TAAAGTTTCACTGGAAAGTTTT-----T--AAA-------AG-GAGGCACAGACAGTTAAGATTAAAA---TTATCTGTTGCAAGTTTGTATTGGGT----GAGAGCTCCT-----TGGTTGGCTTGAATGTATAGCTATATTCATTTTAAAAG i mm10.chr16 I 4 C 0 s canFam3.chr31 13852920 495 + 39895921 CAAAAAATATTTTTTAAGTATACATGCAGTTGCCAAAAATATACTAG------AACCTAAAACAATCTTCTACT---AAAAAAAA----------------TGAGATCTATTTTAAATTGAC-TTTGAATAATATAGTCATAAAGGAGAGTTTA----CTAAACCTACCAGG-TTAAAGCTTGACTTATGTA-----TG-TTTTTATGTT-------AGAATGT--------AAGTTTAAGTTTTTTCAGTC----AATTACTAATATTAGCAGTTACTACC-AAATGTGGAA--ATTTATTTAAA-TGAGCTATAA-------AAATCTCCCATT----TAATTTCATATGAAAGT-CTAGAAATAGCAAATAGTCATGCTTGGGACTTTTTAATAAAAAGAAAACCCTGTTGTCATATATT-ACATACTTGACAACA---TATCA-TGGAAAATTTTCTGCCT--AGAAAA---TAC-AGGAAACAAATAGCTAATATTG----TGTTGTCTATTCTAAGTAAATTCA-GGC----AATTGCTCTTTTGACTAAATGACTTA----CTGAAATACATTCAGCTGAGAGG i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3696210 510 - 6883506 gaaaataaatttttaaCATATGCATATAGTTGCCAAAAATATG-TGG------AAGC--CTTT--------------GAAGGAAT---AAATGAAAACAAGTGTTATCTATTTTTAATTGAT-TTTGAATGCTGCAGTCATGTTTAACAATTTGCTTCTTAAATATAGAATG-TTAAAGCTTGAATTAAATG-----TT-TTTT---GTT-------AGCATATACATTTCAG---------TTTTTCAGTCAGATAATTGCCAAAATTGGCAATGGGTGCCAAAATCTAGGG--ATTTGTTTAAATT-AGCTACAA-------AAATATTATATT----TAAGTTCATATTAAAATATGAGGAGCAGTACCTATTCATGCTCAGGATCTAGAAAGAAGAGGAAAATGCTGTTACCACATTTT-AAATTATTGAACACAAAATATCAGTGGAAAATTTTCTGTGTGGAAAAAAAGATAA-AGGGAACAGATAGCTAATACCATAAC--TTATTTATTCTA-----ACATC-AGT----GATAGCCCCTTTGACTGACTGACTTACGTGCTGAAATATAATCATCCAAAAGG i dasNov3.JH568778 C 0 C 0 a score=46268.000000 s hg38.chr21_KI270874v1_alt 121561 3 + 166743 GAC s panTro5.chr21 3747176 3 + 33445071 GAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17372980 3 + 46275980 GAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3312406 3 - 13858734 GAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4495480 3 + 32716333 GAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155450621 3 - 185818997 GAT i rheMac8.chr3 C 0 I 310 s macFas5.chr3 162275218 3 - 192294377 GAT i macFas5.chr3 I 309 C 0 s macNem1.NW_012019910v1 8755910 3 + 9440265 GAT i macNem1.NW_012019910v1 C 0 I 317 s cerAty1.NW_012002954v1 8485110 3 + 21915920 GAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15059905 3 - 90373283 GAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2245312 3 + 4234846 GAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 243427 3 - 13750039 GAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21967092 3 + 50472720 GAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5061265 3 + 13128814 GAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9637988 3 - 14377064 GAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8776333 3 + 9889416 CAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19227779 3 + 47401472 GAC i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1123820 3 + 2694913 GAC i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20778872 3 - 38779656 GAC i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78151561 3 + 98207768 AAC i mm10.chr16 C 0 C 0 s canFam3.chr31 13853415 3 + 39895921 GAC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3696720 3 - 6883506 CAC i dasNov3.JH568778 C 0 C 0 a score=10981294.000000 s hg38.chr21_KI270874v1_alt 121564 725 + 166743 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTCGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGTCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTGTCT-CTC-C--TCTTTTC---TTTTTTT-------------------TATAATTATTTTGGATGAACATTTGGGGAGGTAGAAATATTTCATACGC-------ACACATTATATCCTATACACA--TTTAAGAGACTAAGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATAGAAATTAAATCTATGCCCTACCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAGC-AAAA-ACCGTGTTCAGCAATGAAAAGAACATGATTTGTCACGTGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGATTTTTT-----TTAGTAGGCGATAAAATAGAGAGAAACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACTAGAGAGAAGAAACACACTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGTATCTTAGAGAGACACTAACAATTTTGTCCTATGAGATCACAGT--AAAAAACT-ATATATTCAG s panTro5.chr21 3747179 724 + 33445071 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTCAACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-TTC-C--TCTTTTC---TTTTTTT-------------------TGTAATTATTTTGGATGAACATTTGGGGAGGTAGAAATATTTCATACGC-------ACACATTATATCCTGTACACG--TTTAAGAGACTAAGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATAGAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAGC-AAAA-ACCGTGTTCAGCAATGAAAAGAAAATGATTTGTCACGCGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGATTATTT-----TTAGTAGGCGATAAAATAGAGAGAAACTGATGAGCATCTTCAAGGCATCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGAGAGAAGAAACACACTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGTATCTTAGAGAGACACTAACAATTTTGTCCTATGAGATCAC-GT--AAAAAACT-ATATATTCAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17372983 723 + 46275980 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTCAACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-TTC-C--TCTTTTC----TTTTTT-------------------TGTAATTATTTTGGATGAACATTCGGGGAGGTAGAAATATTTCATACGC-------ACACATTATATCCTGTACACG--TTTAAGAGACTAAGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATAGAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAGC-AAAA-ACCGTGTTCAGCAATGAAAAGAAAATGATTTGTCACGCGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGATTATTT-----TTAGTAGGCGATAAAATAGAGAGAAACTGATGAGCATCTTCAAGGCATCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGAGAGAAGAAACACACTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGTATCTTAGAGAGACACTAACAATTTTGTCCTATGAGATCAC-GT--AAAAAACT-ATATATTCAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3312409 725 - 13858734 TGGACCCTCTGTTGAATATACAATTCAATTTTAGTTTCGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-CTC-C--TCTTTTC---TTTTTTT-------------------TATAATTATTTTGGATGAACATTTGGGGAGGTAGAAATATTTCGTACGC-------ACACATTATATCCTATACACG--TTTAAGAGACTAAGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATAGAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACGTAAAACACCTCATACTCCAGAGTGTGAGGTCTGTAAACACAGAAAAGC-AAAA-ACTGTGTTCAGCAATGAAAAGAACGTGATTTGTCACGTGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGATTTTTT-----TTAGTAGGTGATAAAATAGAGAGAAACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCGGAGAGAAGAAACACACTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGTATCTTAGAGAGACACTAAAAATTTTGTCCTATGAGTTCACAGT--AAAAAGCT-ATATATTCAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4495483 721 + 32716333 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTCGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-CTC-C--TTTCTT-----TTTTTT-------------------AATATTTATTTTGGATGAACATTTAGGGAGGTAGAAATATTTCATACGC-------ACACATTATATCTTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAACCACAGAAAAGC-AAAA-ACTGTGTTCAGCAATGAAAAGAACACGATTTGTCACGCGGCAGGGATTT-CCCCATTGACCAAGTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGATT-TTT-----TTAGTAGGAGATAAAATAGAGAGAAACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCCGCTAACAAAGACCAGACAGAAGAAACACACTGCTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGAGTATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGT--AAAAA-CT-ACATATTCAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155450934 725 - 185818997 TGGGCCTTCTGTTGAATATACAATT-AATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-CTC-C--CCTTTTC--TTTTTTTT-------------------TATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATGC-------ACATATTATATCCTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGACTCTCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAATAGACTATTAGAAGCTCTTTCCTACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAAC-AAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGTGGCAGGGATTT-CCCCACTGACCAATTAAACTAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT-----TTAGTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGT--AAAAAACT-ATATATTCAG i rheMac8.chr3 I 310 C 0 s macFas5.chr3 162275221 721 - 192294377 TGGGCCCTCTGTTGAATATACAATT-AATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTGTCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-CTC-C--CCTTTTC--TTTTTTTT-------------------TATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATGC-------ACATATTATATCCTATACATG--TTTAAGAGAC----TGTCTGGCTTTCTGACTCTCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAATAGACTATTAGAAGCTCTTTCCTACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAAC-AAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGTGGCAGGGATTT-CCCCACTGACCAATTAAACTAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT-----TTAGTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGT--AAAAAACT-ATATATTCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8756230 727 + 9440265 TGGGCCCTCTGTTGAATATACAATT-AATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-CTC-C--CCTTTTCTTTTTTTTTT-------------------TATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATGC-------ACATATTATATCCTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGACTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAATAGACTATTAGAAGCTCTTTCCTACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAAC-AAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGTGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT-----TTAATAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTCGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGT--AAAAAACG-ATATATTCAG i macNem1.NW_012019910v1 I 317 C 0 s cerAty1.NW_012002954v1 8485113 725 + 21915920 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-CTC-C--CCTTTTC---TTTTTTT-------------------TATAATTATTTTGGATGAACATTTGGGGAGATAGAAATGTTTCATATGC-------ACACATTATATCCTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGACTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAATAGACTATTAGAAGCTCTTTCCTACTGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAAC-AAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGTGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT-----TTAGTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCGGGGACATGAAACATCCCCCTAACAAAGACCAGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGCATCTAAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGT--AAAAAACT-ATATATTCAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15059908 725 - 90373283 TGGGCCCTCTGCTGAATATACAATT-AATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCTCCCC-C--CCTTTTC---TTTTTTT-------------------TATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATGT-------ACACATTATATCCTACACATG--TTTAAGGGACTAAGTGTCTGGCTTTCTGACTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTATGAGGTCTGAAAACACAGAAAAAC-AAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGCGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT-----TTACTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATGAAACATCCCCTTAACAAAGACCAGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGC--AAAAAACT-ATATATTCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2245315 725 + 4234846 TGGGCCCTCTGTTGAATATACAATTCAATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTAGTTCTCTCT-CTC-C--CCTTTTC---TTTTTTT-------------------TATAATTATTTTGGATGAACATTTGGGGAGATAGAAATGTTTCATATGC-------ACACAGTATATCCTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGACTCCCAAGATGGTATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAGTAGACTATTAGAAGCTCTTTCCTACCACTGTGTCCTACATAAAACATCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAAC-AAAA-ACTGTGTTCAGCAATGAAAAGGATATGATTTGTCATGCGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATCTTCTCTTCTTTAACTAGAGGATAGTCATAACAAAGGAATTTTT-----TTAGTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCGGACAGAAGAAACACGCTGGTATGCTTTATGTTCTTTTGGA------------------------------------------ATATTTGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGT--AAAAAACT-ATATATTCAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 243430 726 - 13750039 TGGGCCCTCTGTTGAATATGCAATTCAATTTTAGTTTTGACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATTATTTCACTTTACTTAGAAGGCTTCTAGATCTTTCCATTCCATATAGTTATTTCTCTCT-CTC-C--CCTTTTC---TTTTTCT-------------------TATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATGT-------ATACATTATATCCTATACATG--TTTAAGAGACTAAGTGTCTGGCTTTCTGACTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAGTAGACTATTGGAAGCTCTTTCCTACCGCTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGATCTGAAAACACAAAAAAAC-AAAA-ACTATGCTCAACAATGAAAAGGATATGATTTGTCATGCGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAGCCCCATTTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGGAATTTTT-----TTAGTAGGAGATAAGATAGAGAGAAACTGATGAGTATCTTCAAGGCTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCGGACAGAAGAAACACGCTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGCATCTTAGGGAGAAACTAACAATTTTGTCCTATGAGATCACAGT-AAAAAAACT-ATGTATTCAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21967095 710 + 50472720 TGGCTCCTCTGTTGAATATACAATTCAATTTTTGTTTCTACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAATTATCATTTC-----ACTTAAAAGGCTTCTAGATCTTTTCATTCTATATAGTTAATGCTTTCT-CCC-C--CCTTTTC---TTTTTTT--------T----------AATAATTATTTTGGATGAACATTCGGGGAGATAGAAATATTTCATATAC-------ACATGTTATCTCTTATCCATG--TTTAAGAGACTATGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTACG-CCTGCCCAGTAACCTATTAGAAGCCCTTTCCTACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAAGTCTGAAAACACAGAAAAGC-AAAA-ACCGTGTTTAGCAATGAAAAGGAGATGATTTGTCACATGTCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAACACCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGAA--TTTT-----TTAGTAGGAGATAAAAT----AGACACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCCTCTAACAAAGACCACACAGAAGAAACACATTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGTATCTTAGGGAGAAAC--ACAATTTTGTCCTGTGAGATCACAGT--GAAAAAAC----TATTCAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5061268 717 + 13128814 TGGCCCCTCTGTTGAATATATAATTCAATTTTGGTTTCTACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTC-----ACTTAAGAGGCTTCTAGATCTTTTCATTCCATATAGTTAGTGCTCTCT-CCC-C--------------tttttaaaaaaaat----------aataattattttGGATAAACATTTGGAGAGATAGAAATATTTCATATACACATATTACATATTATCTCCTATCCATG--TTTAAGAAACTATGTGTCTGGTTTTCTGGCTCCCAAGATAGTATCTAGAAAAATTAATACAAATTAAATCTACGCCCTGCCTAGTAGACTATTAGAAGCCCTTTCCTACCACTGTGTCCTAAATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACAAAGAAAGGC--AAA-ATCGTGTTCAGCAATGAAAAGGAGATGATTTGTAACACGGCAGGGATTTCCCCCACTGACCAATAAAAATAAGAAACACCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGAA-TTTTT-----TTAGTAGGAGATGAAAT----AGATACTGATGAGCATCTTCAAGTCTTCTCAGGGACATTAAACATCCCCCTAAAAAAGACCACACAGAAGAAACACACTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGTATCTTAGGGAGAAAC--ACAATTTTGTCCTGTGAGATCACAGT--AAAAAAAC----TATTCAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9637991 720 - 14377064 TGGCCCCTCCATTGAATATATAATTCAATTTTGGTTTCTACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTC-----ACTTAAGAGGCTTCTAGATCTTTTCATTCCATATAGTTAGCCCTCTCT-CCC-C--CCttttc---ttttttt--------ttctttttttAAATAATTATTTTAGATGAACATTTGGGGAGATAGAAATATTTCATATGT-------ACATATTATCTCCTATCCATG--TTTAAGAGACTATGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAATCTATGCCCTGCCCAGTAGACTATCAGAAGCCCTTTCC-ACCACTGTGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAGC-AAAA-ACCGTGTTCAGCAATGAAAAGGAGATGATTTGTCACATGGCAGGGATTT-CCCCACTGACCAATTAAAACAAGAAACACCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAAGAA-TTTTT-----TTAGTAGGAGATAAAAT----AGACACTGATGAGCATCTTCAAGGCTTCTCAGGGACATAAAACATCCCCCTAACAAAGACCACACAGAAGGAACACACTGGTATGCTTCATGTTCTTTTGGA------------------------------------------ATATTTGGGTATCTTAGGGAGAAAC--ACAATTTTGTACTGTGAGATCACAGT--AAAAAAAT----TATTCAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8776336 708 + 9889416 TGGCCCCTCTGTTGAATATACAATTCAATTTTGGTTTCTACTTCATTAGCTGAGGTAAATTATCACATTGGCATCCC---------------A-TAA-TATCATTTC-----ACTTAAGAGGCTTCTAGATCTTTTCATTCCATATAGTTAGTGCTGTCT-TCC-C--CCTTTTT---TTTTTTA-------------------AATAATTATTTTGGATGAACATTTGGGGAGATAGAAATATTTCATATAC-------ACATATTATCTCCTATCCATG--TTTAAGAGACTATGTGTCTGGCTTTCTGGCTCCCAAGATGATATCTAGAAAAATTAATACAAATTAAGTCCACACCCTGCCCAGTAGACTATTAGAAGCCCTTTCCTACCACTGCGTCCTACATAAAACACCTCATACTCCAGACTGTGAGGTCTGAAAACACAGAAAAGC-AAAA-ACCGTGTTCAGCAATGAAAAGGAGATGATTTGTCACACGGCAGGGATTT-CCCCACTGACCAATTAAAATAAGAAACATCATCTTCTCTTCTTTAACTGGAGGATAGTCATAACAAATAA-TTTTT-----TTAGTAGGAGATAAAAA----AGACACTGATGAGCATCTTCAAGGCTTCTCAGGGACATTAAACATCCC-CTAACAAAGACCACACAGAAGACACACACT-GTATGCTTCACGTTCTTTTGGA------------------------------------------ATATTTGGGTATCTTAGGGAGAAAC--ACAATTTTGTCCTGTGAGATCACAGT--AAAAAAAC----TATTCAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19227782 723 + 47401472 CAGCTCCTCTGTTGCATATAAAATTGAATTTTAATTTCTACTTTATTAGCTAAGGTAAGCTAACACATTGGCATCCC---------------A-TTT-TATCATTTCATTTCTTGTAACAGGCTTCTAGATCTTTCCATTCCACATACTCAGTGTTCTCT-CTC-C--CCTTTTC---TTATTTT-------------------TGCAATTACCTTGGATGAAGATTTGGGGAGGTAAAAATATTTTGCATGC-------ATGCATTATGTCCTATCGTGG--TTTAAGAGACTAAGTCTCTGGTTTTCTGGCTCCCTACATGATATCTAGAAAAACTAATACAAATTAAATCTATACCCTGCCCAGTAGACTATTAGAAGCTCTTTCTTACTGCTGTCTCCTACATAA-ATATCTCATACTCCAAACTGTAAAGTCTGAAAACACAGAACAGC-AAAA-ACTGTGTTCAGCAGTGAAAGGGATAAGATTTGTCACACGGCAGGGATTT-CCCCATTGACCAATTAAAATAAGAAACCCCATCTTCTCTTCTTTAACTGGATGATAGTTATAACAAAGGA-TTTTT-----TGAGTAGGAGACAAAATAGAGAGAAACTGGTGATCATCTTCAAGGTTTCTCAGGGACATTAAACATCCCCCTAACAAAGACCAGTCCAAAGAAACATGCTAGTACGCTTCATGTTATTTTGGA------------------------------------------ATATATGCACATCTTAGGGAGAAACCAGCAATTTTGTCCTGTGAGATCACAGT--AAAAAACT-ATATATTCAA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1123823 733 + 2694913 CAGCTCCTCTGTTGCATATAAAATTGAATTTTAGTTTCTGCTTTATTAGC-----TAAGTTAACACATTGGCATCCCATGTAATGGGATGTAA-TGT-AATCATTT-ACCTGATGTAACAGGCTTCTAGATCTTTCCATTCCACATACGCAGTGTTCTCT-CTC-CTTTTTTTTT---TTATTTT-------------------TGCAATTAGCCTGGATAAAGATTTGGGGAGGTAAAAATATTTCGTACGC-------ATGCATTATTTCCTACTCATG--TTTAAGAGACTAAGTCTGTGGTTTTCTGGCTCTGTAGATGATATCTAGAAAAACTAATACAAATTAAATCTATACTCTGCCCAGTAGACTATGAGAAGCTCTTTCTTACTGCTGTGTCCTACATAA-ATATCTCATACTCCAGACCGTAAGGTCCAAAAACACAGAATAGCAAAAA-ATTGTATTCAGCAGTGACAAGGACAAGATTTGGCACACAGCAGGGATTT-CCCCATTGACCAATTAAAATAAGAATCCCCATCTTCTCTTCTTTAACTGGATGATAGTTACAACAAAGGA-TTTTT-----TGAGTAGGAGAAAAAA-AGAGAGAAACTGGTGATCATCTCCAAGGCTACTCAGGGAC-TTAAACATCCCCCTAACAAAGACCAGTCCAAAGAAACATGCTGGTATGCTTCATGTTCCTTTGGA------------------------------------------ACATATGCACATCTTGGGGAGAAACTAGCAATTTTGTCCTGTGAGATCACAGT--AAAAAACT-ATATATTCAA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20778875 689 - 38779656 CAGTGCCTCTGTTGCATATATAATTGAATTTTAGTTTCTATTTTATTAGCTAAACTAAGTTATCACCTTGGCATCCC---------------A-TGA-TATCATTTCACCTCACTTACCAGGCTTCTAGATCTTTCCATTCCACCGACACAATACTCTTT-CTC-C--CCTTTTC---TTATTTT-------------------TGCAACCATTCTAGATAAAGAGTTGGGGAGGTAAAAATATTTTGTACAT-------GCACGTTATTTCCTATTCATG--GTTATGAAACTAAGTCTGTGATTTTTTGCCTCCCAATATGATATCTAA------------AAATTAAATCTATACCCTGCTCAGTAGACTATTAGAAGCTCTTTC-TACTGCTGTGTCTTATATAA---AACATATACTCCAGACTAGGAGATCTGAAAACACAGAATAAC-AAAA-ATTTTGGTCAGTAGTGA-AGGGAGACGAT-------------AAGATTT-CCCCATTGACCAATTAAAATTAGACACCCCATCTTCTCTTCTTTAAATGGATGATAGTTATAACAAAAGA-CTTTT-----TGAGTAGGAGAT-----AAAGAGAATCTGGTGATCATCCTCAAGGCTTCTCAGGGACGTTAAACTTCCCCCTAATGAGGACCAGACCAAAGAAACATACGGGTGTGCTTCATAGTCTTTTGGA------------------------------------------ATATTTGTGGATCTTAAGGAGAAACTAGCAATTGTGTCCTCTGAAATCAAGTA--AAAAAACT-ATTTATTCAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78151564 670 + 98207768 TAGCCCTATTATTG-ATAAGAAATTGAATTTTTGTTCCTACTTGACTAGCTAAGTTTAATTATCATACTGACAACCA---------------GTTGA-TAAGGTTTTACATCATATAGCACTCTTCTGGATCTTTCTCTTCTATACATTCAGCGATTTCT-CTC-C-------TC---TCATTTT-------------------TGTAATTATTTTGCATAGTTA-------AGAT--GAATATTT-GCACAT-------ATATACTATATTCTACCCATG--TTTAGGAGTCTG------CTGTTTTATGCTACTTAAGATATAAGCTAGAAAAGTC--CAGAAAATAA--------CCTGTTCAGCTCTCTATTACAA--TCTATCTTA-TGCTGCAACCAAAATAAAATATCTCACGATGCAGAC--ACAGGGCAGAAAGTACAAGAAAAC-AAAA-ACTATATTCAGCAAAGAGAAAAA---GATTTGTCACAAAGCA-GGATTT-CCCCACTGACTAATTAAAGTAAGAAACA-CATCTTGCCTTCTGTAAGCAGAGGATGGTCCt----------ttttttattattattattatataaaCT----AGAAACAGATGACCATTGTGAAGGCTTCTCAGGGATATTAAACATCCC--TAACAAAGACCAAACAGAGGAAACACACCAATATGCTTTAAAAATGTCAGGG----------------------------------------------CAGGGCACCTTAAGGACAAGCTAGCAAGTTTGTCCTCTGAGATCACAGC--AAAGAAATGATGGGCCCAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13853418 754 + 39895921 ----CAGTCTATTGCATATAAAATGAAATTTTGGTTTCTTCTTTATTAACAAGAGTGAATTATCATATTGGCACCCC---------------A-TGA-TATCATTTCTCCTCATGTAGTAGGCTTCTAGATTTTTCCATTCCATGTACTCCGTACTCTCT-CTC-C--CATTGTC---TTATTTT-------------------TGCAATTATTTTGGACAAAGATTTTTAGAGCTAGAAATATTTTATGCAC-------ATGCAGTATTTCCTCTCCAAGTTTTTGAGAGATTGGGTCTGTGGTTTTTGAGTTCCCAAAATGAGAGCTGGAAAAATTAATACAAATTAAATCAATGTCCTGTTCAGTAGACTATTAGAAGCTCCTTCTTACTGTTGTGTCTTAGATAAAACATCCCATGCTCCAG------AGGACAGAAAATACAGGAAAGT-AAAATATTGTGTTCAATAGTGAAA--GAGAAGATTTGTCACCTGTCAGATAGTT-CTCCATTGACCGAATAAAATTAGAAACCCTATCTTCTCTTCTTTAACTGGAAGATGGTCACAACAAAGGA--TTTT-----TGAGCTAGGGATAAAATAGAGATAAACTGATGAGCAT-TTCAAGGCTTCTCAGAGACATTAAATGGCCTCCTACCAAAAATCAGATGGAAGAAACACACTGATATGCTTCATGTACTTTTGAAATACTGGGGCATCttttttttttttttttttttttttttttAATACTGGGGCATCTTAGTGAGGAACTAGCAATTTTGTTCTTTGAGAGCACAGT--AAAAG-CC-ATACATTCAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3696723 695 - 6883506 CAACCTCTCTTTTG----CAGAATT--------------------TTAGCCAAGAAGAAGTATTACCTTAGCATTCT---------------A-TGA-TATCATTTCTCCTT-TACAGCAGTCTTCTAGTTTTTTCCATACCATATGTTCAGTGCTATCA-CTCAC--CTTTTTC---TTATTTT-------------------TGCAATTATTTGAGATAAAGATTTTGAGAG----AATTTTTTAAAGCAC-------ACATAATATTTCCTATCCACT--TTTGAGAGACTGGGTCTGTGGTTTTCAGGTTCCCGTGAAGATACCTAAAGAAATTAATACAAATTAAATTCATGGCCTGCCCAGTAAACTATTAAAAGCTTCTTCTTACTGCTGTGTCCTAAATACAACATCTCATATTCCAGAGTGCAAAGACAGGAAACACAGAGAATC-AAAATACTGTGCTCAGCATTTAAAGGAA---GATTTGTCACATGGCAGGGATTT-CCCCATATACCAATTAAAATAAGAAACCTTATCTTCTCTTCTTTAACTGG-TGATGGTCACAACGAAGGATTTTTT-----TTAGTAGAAGATAAAAAAGGGACAAACTGAAAAGCAACTTCAAGCCTTCTGAGGGACATTAAACATCCC-CTAACAAAGACCAGACAGAGGAAACACACTGATATGCTTCTTATTCTTTCAGA------------------------------------------ATATGTGGGCATTTTAAGATGGAGCCAGCAATTTTGTCCTCTGAGATGACTGTGaaaaaaact-atatatttag i dasNov3.JH568778 C 0 I 290 a score=173058.000000 s hg38.chr21_KI270874v1_alt 122289 14 + 166743 CCATTT-CAAACTCA s panTro5.chr21 3747903 14 + 33445071 CCATTT-CAAACTCA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17373706 14 + 46275980 CCATTT-CAAACTCA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313134 14 - 13858734 CCACTT-CAAACTCA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496204 14 + 32716333 CCATTT-CAAACTCA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155451659 14 - 185818997 CCATTT-CAAACTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162275942 14 - 192294377 CCATTT-CAAACTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8756957 14 + 9440265 ccattt-caaactca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8485838 14 + 21915920 CCATTT-CAAACTCA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15060633 14 - 90373283 CCATTT-CAAACTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246040 14 + 4234846 CCATTT-CAAACTCA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 244156 14 - 13750039 CCATTT-CAAACTCA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21967805 15 + 50472720 CCATTTTCAAACTCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5061985 15 + 13128814 CCATTTTCAAACTCA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9638711 15 - 14377064 CCATTTACAAACTCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8777044 15 + 9889416 CCATTTTCAAACTCA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19228505 14 + 47401472 GCATTT-CAAACTTA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1124556 14 + 2694913 ACATTT-CAAACTTA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20779564 6 - 38779656 GT---------TTTG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78152234 14 + 98207768 CAATTT-CAAACTCG i mm10.chr16 C 0 C 0 s canFam3.chr31 13854172 14 + 39895921 CCATTC-CAAACACA i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3697418 290 - 6883506 I a score=2883632.000000 s hg38.chr21_KI270874v1_alt 122303 244 + 166743 CTTTAGAAAAG------A---AAAAAGTA--------TAC------------------------------AAAATG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAATGTCAAA--AATTAATTATAAAAGTAGTTACAAGTAGTTACTTTTATAATTATACAGCTAAAAATGAATATAAGTTATATTTTTACTCATGGTTTTGGTGTTGTCAAAGCTC---ATATTTCAGCATAATCC-TTTATTTGCTGTTGAGTTGTGGAG-TTTATTTGG s panTro5.chr21 3747917 244 + 33445071 CTTTAGGAAAG------A---AAAAAGTA--------TAC------------------------------AAAATG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAATGTCAAA--AATTAATTATAAAAGTAGTTACAAGTAGTTACTTTTATAATTATACAGCTAAAAATGAATATAAGTTATATTTTTACTCATGGTTTTGGTGTTGTCAAAGCTC---ATATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17373720 244 + 46275980 CTTTAGGAAAG------A---AAAAAGTA--------TAC------------------------------AAAATG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAATGTCAAA--AATTAATTATAAAAGTAGTTACAAGTAGTTACTTTTATAATTATACAGCTAAAAATGAATATAAGTTATATTTTTACTCATGGTTTTGGTGTTGTCAAAGCTC---ATATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313148 242 - 13858734 CTTTAGAAAAG------A---AAAAAGTA--------TAC------------------------------AAAATG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGCATATATCACATGACACCAATGTCAAA--AATTAATTATAAAAGTAGTTACAAGTAGTTACTTTTATAATTATACAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTTTGGTGTTGTCAAAGCTC---ATATTTCAGCATAATCA-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496218 240 + 32716333 CTTTAGAAAAG------A---AAAAAGT---------TAC------------------------------AAAATG--------------CATAGCTGATTATA--GCTGTCATTTCCATTCTTTTATTTATATCACATGACGCCAATGTCAAA--AATTAATTGTAAA---AGTTACAAGCAGTTACTTTTATAATTATACAGCTAAAAATGAATATAAGTTATATTTTTACTCCTGGTTTTGGTGTTGTCAAAGCTC---ATATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155451673 233 - 185818997 CTTTAGAAAAG----G-A---AAAAAGTA--------TAC------------------------------AAAGTG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAGTGTCAAA--AATTAATTATAAA----------AGTAGTTACTTTTATAATTATATAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCTC---CTATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i rheMac8.chr3 C 0 I 1 s macFas5.chr3 162275956 233 - 192294377 CTTTAGAAAAG----A-A---AAAAAGTA--------TAC------------------------------AAAGTG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAGTGTCAAA--AATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCTC---CTATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 8756971 233 + 9440265 ctttagagaag----a-a---aaaaagta--------tgc------------------------------aaagtg--------------catagctgattaTA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAGTGTCAAA--AATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCTC---CTATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 8485852 233 + 21915920 CTTTAGAAAAG----A-A---AAAAAGTA--------TAC------------------------------AAAGTG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAGTGTCAAA--AATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCTC---CAATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i cerAty1.NW_012002954v1 C 0 I 1 s chlSab2.chr2 15060647 226 - 90373283 CTTTAGAAAAG------A---AAAAAGTA--------TAC------------------------------AAAATG--------------CATAGCTGATTATA--GCTGTCATTTCCATTCTTTTGTATATATCACATGACACCAGTGTCAAA--AATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAA------AT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCTC---CTATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012102865v1 2246054 232 + 4234846 CTTTAGAAAAG------A---AAAAAGTA--------TAC------------------------------AAAATG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAGTGTCAAA--AATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCTC---CTATTTCAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAG-TTTATTTGG i manLeu1.NW_012102865v1 C 0 I 1 s colAng1.NW_012120598v1 244170 234 - 13750039 CTTTAGAAAAG----G-A---AAAAAGTA--------TAC------------------------------AAAATG--------------CATAGCTGATTATA--GCTGTCATTTCTATTCTTTTGTATATATCACATGACACCAGTGTCAAA--AATTAATTATAAA----------AGTAGTTACTTTTATAATTATACAGCTAAAAATGAATAT--GTTATATTTTTACTCATGGTTGTGGTGTTGTCAAAGCTC---CTATTTTAGCATAATCC-TTTATTTGCTATTGAGTTGTGGAGTTTTATTTGG i colAng1.NW_012120598v1 C 0 I 1 s calJac3.chr21 21967820 214 + 50472720 CTTCAGAAAAG----A-A---AAAAAGTA--------TAC------------------------------AGAACG--------------CATAGCTGATTATA--GATGTCAT-----TTCTTTTATATATATCACATGATACCCATGTTAAA-----TAATTATAAA----------AGTA-----------AATT-TACAGCTAAAAATGAATAT--GTTATATTTTTAATCATAGTTTTGATGTCGTCAATGCTC---ATATGTCAGCCTAATCCTTTTATTTGCTATTGAGTTGTGGAA-TTTATTTGG i calJac3.chr21 C 0 I 335 s saiBol1.JH378168 5062000 216 + 13128814 CTTTGGAAAA-----A-A---AAAAAGTA--------TAC------------------------------AAAACA--------------CATAGCTGGTTATA--GATGTCAT-----TTCTTTTATATATATCACATGACACCCATGTTAAA-AAACTAATTATAGA----------AGTA-----------AATT-TACAGCTAAAAATGAATATAAATTATATTTTTACTCATAGTTTTGGTGTCGTCAATGCTC---ATATTTCAGCCTAATCCTTTTATTTGTTATTGAGTT---GAG-TTTATTTGG i saiBol1.JH378168 C 0 I 312 s cebCap1.NW_016107322v1 9638726 223 - 14377064 CTTTGGAAAAGA--AA-A---AAAAAGTA--------TAC------------------------------ATAACG--------------CATAGCTGGTTATA--GATGTCAT-----TTCTTTTATATATATCACATGACACCCATGTTAAAAAAAACTATCATAAA----------AGTA-----------AATT-TACAGCTAAAAATGAATATAAGTAATATTTTTACTCATAGTTTCGGTGTCGTCAATGCTC---ATATTTCAGCCTAATCCTTTTATTTGCTATTGAGTTGTTGAG-TTTATTTGG i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8777059 222 + 9889416 CTTTGGAAAAGA--AA-A---AAAAAGTA--------TAC------------------------------AAAACG--------------TATAGCTGATTATA--GATGTCAT-----CTCTTTTATATATATCACATGACACCCATGTTAAA-AAACTAATTATAAA----------AGTA-----------AATT-TACAGCTAAAAATGAATGTAAGTTATATTTTTACTCATAGTTTTGGTGTCATCAATGCTT---ATATTTCATCCTAATCCTTTTATTTGTTATTGAGTTGTGGAG-TTTATTTGG i aotNan1.NW_018487195v1 C 0 I 1 s micMur3.chr31 19228519 221 + 47401472 CTTCAGAAAAG----GAA---AAAAAGTA--------TAC------------------------------AAAATG--------------TATAGCCCATTAGT--GTCG---TTTTCTTTCTTTTATATATATCACATGACCCCAACATTAAA--AATTAATTATAAA----------AGTAAT----------ATT-TGCAGCTAAAAATAAATATGAATTATACTTTG----ATGGTT-TGGTGTTATCAAAGCTTATTATATCTCAGTCTAACCCTTTAATTTGCTACTGAGTTGCAGAG-TTTATTTAA i micMur3.chr31 C 0 I 1 s proCoq1.NW_012144079v1 1124570 223 + 2694913 CTTCACAAAAG----G-A---AAAAAGTA--------TAC------------------------------AAAATA--------------TATAGCCCATTAAT--GCCGTCATTTCCCTTCTTTTATATATATCACATGACCCCAATGTTAAA--AATTAATTATAAA----------AGTAAT----------ATT-TACAGCTAAAAACAAATATGAATCATACTTTG----ATGGTT-TAGTGTTGTCAAAGCTCATTATATCTCAGTCTAACCCTTTAATTTGCTATTGAGTTGCAGAG-TTTATTTAG i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20779570 232 - 38779656 CTTCAGAAAAG----A-G---AAAAAGTACATATTTGTAC------------------------------ATGAAA--------------AGTAGCCCATTCCT--GCTGTCATTTTCCTTCTTT--TATCTATCACAGGACCCTAAAGTTAAA--AATTAATTATAAC----------AGTAAC----------ATT-TATAGCTAAAAATAAATATG-ATTACATTTTGACTTATGTTT-TGATGTTGTCAAAGCTCATTATAGCTCAGTCTAACTCTTTAATTTGCTGTTGAGTTGCTGAG-GTTATCTGG i otoGar3.GL873528 C 0 I 1 s mm10.chr16 78152248 220 + 98207768 TGTCAAGAAAA----G-AGTCAGAAGGGA--------AGT------------------------------GAAAGA--------------CCTAGCTCATTAAA--GTTGACATTTGTCTTCTTTTACATATGTCACATGATCCCAATGACAAA--AGTTAAATATGAA----------GGTATT----------ACT-GGTGGCTAGCAATGAATGTGGAGTATGTTTTCAGTC---------TTGCCAACAAAGTTCGCCATATCTCAACCT-GTCG-TAAATTTGCTATTGAGTTATGGAG-CAAGCTTAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13854186 225 + 39895921 CCTCAGGAAAGAGGAA-A---AAGAAGTA--------TAC------------------------------AAAATG--------------CATAGCCAATTAAA--GCTGTCATTTCGCTTCTTTTACTTATATCACATGATCCCAATGTTAAA--AATTAATTACAAA----------AGCAAT----------ATT-TACAGCTAAAAATGAATATGGATTGTATTTTGACTCACGGTTTCAGTGTTTTCAGACCT----ATCTCTCAGACTCACTCTTTAATTTGCAATTGAGTTGT---G-TTTATCTGG i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3697708 258 - 6883506 ctttaaaaaaa----T-A---AAAATACA--------TATATGTAACTATTTCAAACCCATTTCAGAAAGAAAATGGAGAACACCGACTCCACAACCCATTAAACTTCTGTATTCCTTCTCCTTCTTTATAAAGCACATGATCACATTGTTAAA--AATTAGTTAGAAA----------AATAAT----------ATT-TGCAGCTAAAA-TGAATATGTATTATATTTTGACTAATGGTTTTGGTGTTGTCAGAAGTC-------------ATTATC--TCAATTTGCTATTGAGTTGCAGCA-TTTATTTGA i dasNov3.JH568778 I 290 I 1 a score=2180710.000000 s hg38.chr21_KI270874v1_alt 122547 167 + 166743 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTGAAAAAAACAAGAAGAATATTAAATAAAACCAACATACATGGAGATATATCCTGTAGTAGAATGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTC-TTTAATAA s panTro5.chr21 3748161 167 + 33445071 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTGAAAAAAACAAGAAGAATATTAAATAAAACCAACATACATGGAGATATATCCTGTAGTAGAATGCTTGCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTC-TTTAATAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17373964 167 + 46275980 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTGAAAAAAACAAGAAGAATATTAAATAAAACCAACATACATGGAGATATATCCTGTAGTAGAATGCTTGCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTC-TTTAATAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313390 166 - 13858734 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTGAAAAAAAC-AGAAGAATATTAAATAAAACCAACATACATGGAGATATATCCTGTAGTAGAATGCTTTCTTTGGCT-TTC------ATGTTTAAAATGTTAATGAAGTGGACAAGCAGTTC-TTTAATAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496458 166 + 32716333 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTG-AAAAAACAAGAAGAATATTAAATAAAACCAACATACATGGAGATATATCCTGTAGTAGAATGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTC-TTTAATAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155451907 167 - 185818997 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTG-ATAAAACAAAAACAATATTAAAGAAAACCAACATACATGGAGATACATCCTGTAGTAGACTGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAA i rheMac8.chr3 I 1 C 0 s macFas5.chr3 162276190 167 - 192294377 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTG-ATAAAACAAAAACAATATTAAAGAAAACCAACATACATGGAGATACATCCTGTAGTAGACTGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAA i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 8757205 167 + 9440265 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTG-ATAAAACAAAAACAATATTAAAGAAAACCAACATACATGGAGATACATCCTGTAGTAGACTGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAA i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 8486086 163 + 21915920 TTTTTAAGTGCAATTTATTT------TTTATTTGTACATTAATTATTG-AAAAAACAAAAACAATATTAAAGAAAACCAACATACATGGAGATACATCCTGTAGTAGACTGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAA i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr2 15060874 167 - 90373283 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTG-AAAAAACAAAAACAATATTAAAGAAAACCAACATACACGGAAATACATCCTGTAGTAAACTGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAA i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012102865v1 2246287 167 + 4234846 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTG-AAAAAACAAAAACAATATTAAAGAAAACCAACATACATGGAGATACATCCTGTAGTAGACTGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAATAA i manLeu1.NW_012102865v1 I 1 C 0 s colAng1.NW_012120598v1 244405 167 - 13750039 TTTTTAAGTGCAATTTATTTTTTC--TTTATTTGTACATTAATTATTG-AAAAAACAAAAACAATATTAAAGAAAACCAACATACATGGAGGTACATCCTGTAGTAGACTGCTTTCTTTGGCT-TTC------ATGAGTAAAATGTTAATGAAGTGGACAAGCAGTTCTTTTAGTAA i colAng1.NW_012120598v1 I 1 C 0 s calJac3.chr21 21968369 157 + 50472720 TTTTTAACTGCAATTCATTTTTTA------TTTGTACCTTATT------AAAAAAC-AAAAAAAAATTAAAGAAAACCAACATACATGAAGATATATCCTGTAATAGAATGCTTTCTTTGGCT-TTC------ATGATGAAAATGTTAACGAAGTGGGCAAGCAGCTCTTTTAATAA i calJac3.chr21 I 335 C 0 s saiBol1.JH378168 5062528 153 + 13128814 TTTTTAAGTGCaatttatttttta------tttgtacattatt------tta-----aaaaaaaaattaaaGAAAACCAACATACATGAAGATATATCCTGTAGTAGAATGCTTTCTTTGGCT-TTC------ATGATTAAAATATTAATGAAGTGGGCAAACAGCTCTTTTAATAA i saiBol1.JH378168 I 312 C 0 s cebCap1.NW_016107322v1 9638950 156 - 14377064 TTTTTAAGTGCAATTTATTTTTTC--TTTTTTTGTACATTATT------AA------AAAAAAAAATTAAAGAAAACCAACATACATGAAGATATATCCTGTAGTAGAATGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGGCAAGCAGCTCTTTTAATAA i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8777282 150 + 9889416 TTTTTAAGTGCAATTTATTTTTTC--TTGATTTGTACATTATT------AA------AAAAAAAAATT----AAAACCAACATACATGAAG--ATATCCCATAGTAGAATGCTTTCTTTGGCT-TTC------ATGATTAAAATGTTAATGAAGTGGGCAAGCAGCTCTTTTAATAA i aotNan1.NW_018487195v1 I 1 C 0 s micMur3.chr31 19228741 163 + 47401472 TTTTTAAATGCAATTTATGTTTTC--TTTATTTGTATATTAATTATTA-AAAAACAAAAAACAACATT----AAAACCAACACACATGAAGAAATATTCCACAATAGAATGCTTGCCTTGGCT-CTA------ATGATTAAAATGCTAATGAAGTGGACAAGCAGCACTTTTAAGAA i micMur3.chr31 I 1 C 0 s proCoq1.NW_012144079v1 1124794 163 + 2694913 TTTTTAAATGCAATTTATGTTTTC--TTTATTTGTATATTAATTATTA-AAAAACAAAAAACAACATT----AAAACCAACACATGTGAAGAAACATTCCACAATAGAATGCTTTCCTTGACT-CTA------ATGATTAAAATGCTAATGAAATGGACAAGCAGGACTTTTAAGAA i proCoq1.NW_012144079v1 I 1 C 0 s otoGar3.GL873528 20779803 161 - 38779656 TTTTTAAATGCAATTTATGTTTTC--TTTATTTGTATATTAATTATTA-AAAAACAAAAG--AACATT----AAAATCAACAGACACAAAGAAATATCCTTCAGTAGAATGCTTTCTTCGGCT-CTA------ATGATTTAAATGCTAATGAGACAAACAAACAGCACTTTTAAGAA i otoGar3.GL873528 I 1 C 0 s mm10.chr16 78152468 161 + 98207768 CCTTTTAACACAATTT----------TTTATTTGTATATTAATTCTTT-AAAAGTTAAAAAGAATGATA---AGAAACAACTTATGTGAAGAAATTTTCTGCTACAGAAAGGTTTCTCTTTTT-TTCCTGGTAATGATTAAAATATGAATAAAGTGAACAACCAGCCATTCAAAGA- i mm10.chr16 C 0 C 0 s canFam3.chr31 13854412 144 + 39895921 TTTTCAAATGCAATTTATTCTTTC--TTTATTTGCACATTAATTATTA-AAAAC------------TGAGAGAAAATCAACACATATGAAGATAC------------AATGCTTTTCTCTGCTCCTA------ATGATTAAAATGTTAATAAAGTGGACAAGACACATTTTCAAGAA i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3697967 109 - 6883506 TTTTTAAAGACaatttatttttttctttcatttgtatattaattattt-t-------aaaagaatattaaaGAAAACCAACACACATGAGGAAACAT---------------------------GGC------ATGA--AAATCTGTGATAA------------------------- i dasNov3.JH568778 I 1 I 143 a score=459829.000000 s hg38.chr21_KI270874v1_alt 122714 35 + 166743 TATGAAGCAATAAACATAAGGGAAGAAGAAGGTA-A s panTro5.chr21 3748328 35 + 33445071 TATGAAGCAATAAACATAAGGGAAGAAGAAGGTA-A i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374131 35 + 46275980 TATGAAGCAATAAACATAAGGGAAGAAGAAGGTA-A i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313556 35 - 13858734 TATGAAGCAATAAACATAAGGGAAGAAGAAGGTA-A i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496624 32 + 32716333 TATGAAGCAATAAACATAAGGGAAGAAGA---TA-A i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452074 35 - 185818997 CATGAAACAATAAACATAAGGGAAGAAGAAGGTT-A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276357 35 - 192294377 CATGAAACAATAAACATAAGGGAAGAAGAAGGTT-A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757372 35 + 9440265 CATGAAACAATAAACATAAGGGAAGAAGAAGGTT-A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486249 36 + 21915920 CATGAAACAATAAACATAAGGGAAGAAGAAGGTTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061041 35 - 90373283 TATGAAGCAATAAACATAAGGGAAGAAGAAGGTA-A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246454 35 + 4234846 CATGAAACAATAAACATAAGGGAAGAAGAAGGTT-A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 244572 35 - 13750039 TATGAAGCAATAAACATAAGGGAAGAAGGGGGTA-A i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21968526 35 + 50472720 TATGAAGCAATAAACATAAGGGAAAAAGAACGTA-A i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5062681 32 + 13128814 TATGAAGCAATAAACATAAGGGAGGAAG---GTA-A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639106 35 - 14377064 TATGAAGCAATAAACATAAGGGAAGAAGAAGGTA-A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8777432 35 + 9889416 TATGAAGCAATAAACATAAGGGAAGAAGAAAGTA-A i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19228904 35 + 47401472 TATGAAGCAATAAATGTGAGGCAACAAGAAGGTT-A i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1124957 35 + 2694913 CATGAAGCAATAAATGTGAGGCAGGAAGAAGGTT-A i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20779964 30 - 38779656 TATGAAGCTATAAATGTGA---AAGGAGAAGGT--- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78152629 31 + 98207768 -ATGAGACAATAAATATA---GTATGAGAAAGTT-A i mm10.chr16 C 0 C 0 s canFam3.chr31 13854556 32 + 39895921 TATGAGACAATAAACATGAGGAAAGAAG---GTA-A i canFam3.chr31 C 0 C 0 e dasNov3.JH568778 3698076 143 - 6883506 I a score=2482240.000000 s hg38.chr21_KI270874v1_alt 122749 197 + 166743 AAAAATA----AAATGATG-TGACT---CACCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAC-GTAGGTATAT----TGTAGTCCATGTCTTT-----AAC----ATCAATTACAA-CCCCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTT-AAAAAC---TGGTTTCCCTGAAT s panTro5.chr21 3748363 196 + 33445071 AAAAATA----AAATGATG-TGACT---CACCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAC-GTAGGTATAT----TGTAGTCCATGTCTTT-----AAC----ATCAATTACAA--CCCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTT-AAAAAC---TGGTTTCCCTGAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374166 198 + 46275980 AAAAATA----AAATGATG-TGACT---CACCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAC-GTAGGTATAT----TGTAGTCCATGTCTTA-----GGTTA--ATCAATTACAA--CCCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTT-AAAAAC---TGGTTTCCCTGAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313591 197 - 13858734 AAAAATA----AAATGATG-TGACT---CACCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAC-GTAGGTATAT----TGTAGTCCATGTCTTT-----AAC----ATCAATTACAA--CCCCTCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTTAAAAAAC---TGGTTTCCCTGAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496656 195 + 32716333 AAAAATA----AAATGATG-TGACT---CGCCTGTGTCAAATATT---GCATACCCATCACCAAATCTAAAACCTATTCAC-GTAGGTATAT----TGTAGTCCGTGTCTTT-----AAC----A-CAGTTACAA--CCCTCCTTTCCTCAAGATT-AGCCACAGAACAAATTAGAAGCTGCTCTGTGGATGCTGCTTCTCTTT-AAAAGC---TGGTTTCCCTGAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452109 195 - 185818997 AAAAAAA----AAATGATG-TGACT---CGCCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAT-GTAGGTGTAC----TGTAGTCCATGTCTTT-----AAT----ACCAGTCACAA---CCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGTTGCTTCTTCTCTTT-AAAAAC---TGGCTTCCCTGAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276392 195 - 192294377 AAAAAAA----AAATGATG-TGACT---CGTCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAT-GTAGGTGTAC----TGTAGTCCATGTCTTT-----AAT----ACCAGTCACAA---CCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTTCTTCTCTTT-AAAAAC---TGGCTTCCCTGAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757407 195 + 9440265 AAAAAAA----AAATGATG-TGACT---CGCCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAT-GTAGGTGTAC----TGTAGTCCATGTCTTT-----AAT----ACCAGTCACAA---CCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTTCTTCTCTTT-AAAAAC---TGGCTTCCCTGAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486285 195 + 21915920 AAAAAAA----AAATGATG-TGACT---CGCCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAT-GTAGGTGTAC----TGTAGTCCATGTCTTT-----AAT----ACCAGTCACAA---CCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTTCTTCTCTTT-AAAAAC---TGGCTTCCCTGAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061076 199 - 90373283 AAAAAAAAAATAAATGATG-CGACT---CACCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAAGTATTCAT-GTAGGTGTAC----TGTAGTCCATGTCTTT-----AAT----ACCAGTCACAA---CCCCCTTTCCTCAAGATT-AGCCACAGGACAACTTAGAAGCTGCTCTGTGGATGCTTCTTCTCTTT-AAAAAC---TGGCTTCCCTGAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246489 193 + 4234846 AAAAA------AAATGATG-TGACT---CGCCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAATCTATTCAT-GTAGGTGTAC----TGTAGTCCATGTCTTT-----AAT----ACCAGTCACAA---CCCCCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTTCTTCTCTTT-AAAAAC---TGGCTTCCCTGAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 244607 201 - 13750039 AAAAAAAGA--AAATGATG-TGACT---CGCCCATGTCAAATATT---GCATACCCATCACCAAATCTAAAAACTATTCAT-GTAGGTGTACTGTATGTAGTCCATGTCTTT-----AAT----ACCCGTCACAA---CCCTCTTTCCTCAAGATT-AGCCACAGGACAAATTAGAAGTTGCTCTGTGGATGCTTCTTCTCTTT-AAAAGC---TGGCTTCCCTCAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21968561 193 + 50472720 AAAAATT----AAATGAAG-TGACT---TGCCCATGTCAAATATT---GCATACTCATCACCAAATTTAAAAAC--TTCAC-GCAGGTGTAT----TGTAGTCCATGCATTT-----AAT----ACCAGTTACAA---CCCCCTTACCCCAAGGTT-AGCCACAGGACAAATTAGAAGCTGCTCTGTAGATCCATATTCTCTTT-AAAAAC---TGGTTTCCCTGAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5062713 195 + 13128814 AAAAATT----AAATGAAG-TGACT---TGCCCATGTCAAATATT---GCATACTCATCACCAAATTTAAAAACTATTCAC-GCAGGTGTAT----TGTAGTCCGTGTATTT-----AAT----ACCAGTTACAA---CCCCCTTCCCTCAAGATT-AGCCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTTATTCTGTTT-AAAAAC---TGGTTTCCCTGAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639141 184 - 14377064 AAAAATT----AAATGAAG-TGACT---TACCCATGTCAAATATTGCAGCATACTCATCACCAAATTTAAAAACTATCCAC-GCAGGTGT------------------ATTT-----AAT----ACCAGTTACAA---CCCCCTTACCTCAAGATT-AGCCACAGGACAAATTAGAAGCTACTCTGTGGATGCTTATTCTTTTT-AAAAAC---TGGTTTCCCTGAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8777467 195 + 9889416 AAAAATT----AAATGAAG-TGACT---TGCCCATGTCAAATATT---GCATACTCATCACCAAATTTAAAAAGTATTCAC-ACAGGTGTAT----TGTAGTCCATGTATTT-----AAT----ACCAGTTACAA---CCCCCTTACCTCAAGATT-AGTCACAGGACAAATTAGAAGCTGCTCTGTGGATGCTTATTCTCTTT-AAAAAC---TGGTTTCCCTGAAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19228939 201 + 47401472 AAAAATA----GAATGCTG-TAACC---TGTCAACGTCAAATACT---GCATAACTGTTACCAAAACTAAAGACTATTCACTGTGGGTGTAC----TGTAGTCCA-----TA-----ACTAAACACCAATTACCCGCCACCTCTTACCTCAAGATC-AGTTGAAGGACAAATTAGAAGATGCTCTGTGGACGCTTCTTCTCTTA-AAAAGAAACTACTTTCCCTGAAT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1124992 206 + 2694913 AAAAACA----GAATGATG-TAACC---TGTCAATGTCAAATACC---GCATACCTGTTATCAAAACTAAAGACTATTCACTGTGGTTGTAT----TGTAGTCCATATCTTA-----AATAAACACCAATTACCCCCCACCTCTTACCTCAAGATC-AGTCAAAAGACAAATTAGAAGATGCTCTGTGGATGCTTCTTCTCTTA-AAAAAAAAATAATTTCCCTGAAT i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20779994 199 - 38779656 --AAAAA----GAATGATA-TAGCC---TGTCA--GTCAAATACT---GCCTACCCACTCCCAATGGGTGATACCA-TCACTGCAGGTCTAT----TGTAGTCCATGTCTTA-----AATAAACACCAA-TGTCCTCCCCTCCTTACCTCAAGATG-AGTCAAAGGACAAAGTAATAGCAGCTCTGTGGACACTTCTCTTTTTA-AAAAATAA-TCCTCTCCCTGAAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78152660 179 + 98207768 AAACATTTT--TATTGATA-TG--------------------------GCTCATCCATTACCCAAAACAACGCCTGTTCATTGCTGGTATAT----TGGAGTCCATTTCATA-----AATAAACACCAATTATTC---TCACCTTGCTTTACTGTCAAACCAAAGGACAAATCAGAACCTCCCTTATGCA---attttatgtgt-atgag----tattttacctgcat i mm10.chr16 C 0 I 325 s canFam3.chr31 13854588 192 + 39895921 AAAAAAA----AAGTGATG-TGACC---TGTCAATGTCAAATACT---GAGCACTCATTACCAAAACTAAAGATTATTCACTGCAGGTGTAG----TACAGCACATACCTCA-----GATAAACGCCAATTA------CCCCCTCACCCTGAG-TC-AGCCTAAGGACAGATTGGAAACTGCTTTGTGGATACTTCTC----TT-AGAAAA---TGGTTTCCCTGAAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3698219 191 - 6883506 AAAAATG----GAGTGATGCTGGCTAAACATCAATATCAGATACT---AAATACCCATTAAGTAAACTAG------TCCATTGCTTGTGCAT----TATAGTCTACACCTTTTAATAAAT----ACCCATCTC-----CCCTCTCATGCCAAG-CT-AGCCAAATAACAAATCGGAAGCTACTTTTTGGATACTTCTCC------TAAAAC---TGGTTTCTTTGAAT i dasNov3.JH568778 I 143 C 0 a score=953574.000000 s hg38.chr21_KI270874v1_alt 122946 68 + 166743 C---AATAATACTGAACTTGACCTAGTTAGAAAGTATGTTCACAGAAATAACCCTCAGTCTTCACCTGTTA s panTro5.chr21 3748559 68 + 33445071 C---AATAATACTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCACCTCTTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374364 68 + 46275980 C---AGTAATACTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCACCTCTTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313788 68 - 13858734 C---AATAATACTGAACTTGACCTGGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCACCTGTTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496851 68 + 32716333 C---AATAATAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAAGCCTCAGTCTTCACCTGTTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452304 68 - 185818997 C---CCTAATAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTTGCCTGTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276587 68 - 192294377 C---CCTAATAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTTGCCTGTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757602 68 + 9440265 C---CCTAATAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTTGCCTGTGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486480 68 + 21915920 C---CCTAACAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCGCCTGTGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061275 68 - 90373283 C---CCTAACAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCGCCTGTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246682 68 + 4234846 C---CCTAACAGTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCGACTGTGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 244808 68 - 13750039 C---CTTAATACTGAACTTGACCTAGTTAGAAAGTATGTTCACAAAAATAACCCTCAGTCTTCGCCTGTGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21968754 68 + 50472720 C---ATCAATAGTAAACTTGACCTAGTTAGAGAGTATGTTCACAAAAATAACCCTTAGTCTTTGCCTGTTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5062908 66 + 13128814 C---ACCAATAGTAAAC--GACCTAGTTAGAGAGTATGTTCACAAAAATAACCCTTAGTCTTTGCCTGTTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639325 68 - 14377064 C---ACCAATAGTAAACTTGACCTAGTTAGAGAGTATGTTCACAAAAATAACCCTTAGTCTTTGCCTGCTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8777662 68 + 9889416 C---ACCAATAGTAAACTTGACCTAGTTAGAGAGTATGTTCACAAAAATGACCCTTAGTCTTTGCCTGTTA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19229140 69 + 47401472 CA--ACTAATAGTGAAGTTGACCTAGTTAGAAAGTATGTCCACAAAAGTTATCTGCAGTCTTTGCCTATTA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1125198 69 + 2694913 CG--ACTAATACTGAAGTTTACCTAGTTAGAAAGTATGTCCACAAAAGTTATCCTTAGTCTTTGCCTATTA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20780193 69 - 38779656 CA--ACTAATAGTAAATGTGACCTAGATAGGAAGCATGTTCACAAAAGTCAGCTTCAGTCTTTGCCTTTTA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13854780 69 + 39895921 -CA-GCTAATAGGAATCATGATCTAGTTATGAAGTATGTTCTCAAAAATTATCCACAATACTTGCTCGTTA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3698410 69 - 6883506 --CAGCTAATAATGAATTTGACCTAGTTAGAAAGTATGCTCTCAAAAATTATCTTTAGTATTTGTCTGTTT i dasNov3.JH568778 C 0 C 0 e mm10.chr16 78152839 325 + 98207768 I a score=30197.000000 s hg38.chr21_KI270874v1_alt 123014 2 + 166743 AA s panTro5.chr21 3748627 2 + 33445071 AA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374432 2 + 46275980 AA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313856 2 - 13858734 AA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496919 2 + 32716333 AA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452372 2 - 185818997 AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276655 2 - 192294377 AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757670 2 + 9440265 AA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486548 2 + 21915920 AA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061343 2 - 90373283 AA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246750 2 + 4234846 AA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 244876 2 - 13750039 AA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21968822 2 + 50472720 AA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5062974 2 + 13128814 AA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639393 2 - 14377064 AA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8777730 2 + 9889416 AA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19229209 2 + 47401472 AA i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1125267 2 + 2694913 GA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20780262 2 - 38779656 GA i otoGar3.GL873528 C 0 C 0 s dasNov3.JH568778 3698479 2 - 6883506 AA i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13854849 0 + 39895921 C e mm10.chr16 78152839 325 + 98207768 I a score=441998.000000 s hg38.chr21_KI270874v1_alt 123016 39 + 166743 AGTGAAGATTTATTGcttgggtggctga-ggctagaagat s panTro5.chr21 3748629 39 + 33445071 AGTGAAGATTTATTGcttgggtggctga-ggctagaagat i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374434 39 + 46275980 AGTGAAGATTTATTGcttgggtggctga-ggctagaagat i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313858 39 - 13858734 AGTGAAGATTTATTGcttgggtggctga-ggctagaagat i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496921 39 + 32716333 AGTGAAGATTTATTGCTTGGGTGGCTGA-GGCTAGAAGAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452374 39 - 185818997 AGTGAAGATCTATTGcttgggtggctga-ggctagacgat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276657 39 - 192294377 AGTGAAGATTTATTGcttgggtggctga-ggctagacgat i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757672 39 + 9440265 AGTGAAGATTTATTGcttgggtggctga-ggctagacgat i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486550 39 + 21915920 AGTGAAGATTTATTGcttgggtggctga-ggctagacgat i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061345 39 - 90373283 AGTGAAGATTTATTGcttgggtggctga-ggctagaagat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246752 39 + 4234846 AGTGAAGATTTATTGcttgggtggctga-ggctagaagat i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 244878 39 - 13750039 AGTGAAGATTTATTGcttgggtgactga-ggctagaagat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21968824 38 + 50472720 AGTGAAGATTTATTGCCTgggtagctgagggttagggt-- i calJac3.chr21 C 0 I 2 s saiBol1.JH378168 5062976 37 + 13128814 AGTGAAGATTTATTGcttgggtagctga-ggttagggt-- i saiBol1.JH378168 C 0 I 2 s cebCap1.NW_016107322v1 9639395 37 - 14377064 AGTGAAGATTTATTGCTTGGGTAGCTGA-GGTTAGGGT-- i cebCap1.NW_016107322v1 C 0 I 2 s aotNan1.NW_018487195v1 8777732 38 + 9889416 AGTGAAGATTTATTGCTTGGGTAGCTGAGGGTTAGGGT-- i aotNan1.NW_018487195v1 C 0 I 32 s micMur3.chr31 19229211 39 + 47401472 AGTGAAAGTTTATtacttgggaggttga-ggcagaaggat i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1125269 39 + 2694913 AGTCAGAGTTTATtacttgggaggttga-ggcagaaggat i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20780264 39 - 38779656 AGTGAACGTTTATtactggagaaattga-ggcaggaggac i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3698481 0 - 6883506 C e canFam3.chr31 13854849 0 + 39895921 C e mm10.chr16 78152839 325 + 98207768 I a score=233231.000000 s hg38.chr21_KI270874v1_alt 123055 27 + 166743 catttgagcctaggagctggaggatac s panTro5.chr21 3748668 27 + 33445071 catttgagcctaggagctggaggatac i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374473 27 + 46275980 catttgagcctaggagctggaggatac i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313897 27 - 13858734 catttgagcctaggagctggaggatac i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496960 12 + 32716333 CATTTGAGCCTA--------------- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452413 27 - 185818997 catttgagcctaggagctggaggatac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276696 27 - 192294377 catttgagcctaggagctggaggatac i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757711 27 + 9440265 catttgagcctaggagctggaggatac i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486589 27 + 21915920 catttgagcctaggagctggaggatac i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061384 27 - 90373283 catttgagcctaggagctggaggatac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246791 27 + 4234846 catttgagcctaggagctggaggatac i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 244917 27 - 13750039 catttgagcctaggagctggaggatat i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21968864 26 + 50472720 gacttgagacc-ggagtctgaggatac i calJac3.chr21 I 2 I 4 s saiBol1.JH378168 5063015 26 + 13128814 gacttgagccc-tgagtctgaggatac i saiBol1.JH378168 I 2 I 4 s cebCap1.NW_016107322v1 9639434 26 - 14377064 GACTTGAGCCC-GGAGTCTGAGGATAC i cebCap1.NW_016107322v1 I 2 I 4 s micMur3.chr31 19229250 27 + 47401472 gtcttgagcccaggagctctaggctgc i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1125308 27 + 2694913 ctcttgagcccaggagctctaggctgc i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20780303 27 - 38779656 ctcttcagcccaggagttcgaggttac i otoGar3.GL873528 C 0 C 0 e dasNov3.JH568778 3698481 0 - 6883506 C e aotNan1.NW_018487195v1 8777770 32 + 9889416 I e canFam3.chr31 13854849 0 + 39895921 C e mm10.chr16 78152839 325 + 98207768 I a score=860464.000000 s hg38.chr21_KI270874v1_alt 123082 73 + 166743 agtgcactatgatcccccacctgtgaatagccactgcactccagcctgggcaatataacaagaccccatctc-t s panTro5.chr21 3748695 73 + 33445071 agtgcactatgatcccccacctgtgaatagccactgcactccagcctgggcaacataacaagaccccatctc-t i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374500 73 + 46275980 agtgcactatgatcccccacctgtgaatagccactgcactccagcctgggcaacataacaagaccccatcta-c i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313924 73 - 13858734 agtgcactatgatcccccacctgtgaatagccactgcactccagcctgggcaacataacaagaccccatctc-t i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4496972 64 + 32716333 -------TATgat--cccacctgtgaatagccactgcactccagcctgggcaacacaacaagaccccatctc-t i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452440 72 - 185818997 agtgcactgtgat--cccacctgtgaacagccactgcactccagcctgggcaacataataagaccccatctcaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276723 70 - 192294377 agtgcactgtgat--cccacctgtgaacagccactgcactccagcctgggcaacataataagaccccatctc-- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757738 71 + 9440265 agtgcactgtgat--cccacctgtgaacagccactgcactccagcctgggcaacataataagaccccatctc-a i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486616 70 + 21915920 agtgcactgtgat--cccacctgtgaacagccactgcactccagcctgggcaacataataagaccccatctc-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061411 70 - 90373283 agtgcactgtgat--cccacctgtgaacagccactgcactccagcctgggcaatataacaagaccccatctc-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246818 71 + 4234846 ggtgcactgtgat--cccacctttgaacagccactgcactccagcctgggcaatataacaagaccccatctc-a i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 244944 70 - 13750039 agtgcactgtgat--cccacctgtgaacagccactgcactcaagcctgggcaacataacaagaccccatctc-- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21968894 71 + 50472720 agtgccctatgat--tgcacctgtaaatagccactgcactccagcctaggcaacttaacaagaccccatctc-t i calJac3.chr21 I 4 C 0 s saiBol1.JH378168 5063045 71 + 13128814 agtgccctatgat--tgcacctgtaaatagccactgcactccagcctaggcaacataacaagaccccatctc-t i saiBol1.JH378168 I 4 C 0 s cebCap1.NW_016107322v1 9639464 71 - 14377064 AGTGCCCTATgat--tgcacctgtaaatagccactgcactccagcctaggcaacataacaagaccccatctc-t i cebCap1.NW_016107322v1 I 4 C 0 s aotNan1.NW_018487195v1 8777802 71 + 9889416 AGTGCCCTATgat--tgcacctgtaaatagccactgcactccagcctaggcaacataacaagaccccatctc-t i aotNan1.NW_018487195v1 I 32 C 0 s micMur3.chr31 19229277 71 + 47401472 agtgcgttatgat--tgcacctatgaatagccattgcactctagccagggcaacatagcaagacctcacctc-t i micMur3.chr31 C 0 I 459 s proCoq1.NW_012144079v1 1125335 71 + 2694913 agtgcactatgat--tgcacctatgaatagccatcacactccagccagggcaagagagcaagaccttgcctc-t i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20780330 70 - 38779656 tgtgtgttataat--tgcacctgtgaatagctacagcactccaggc-tggcaacatagcaaaaggtcacctc-t i otoGar3.GL873528 C 0 I 1 e dasNov3.JH568778 3698481 0 - 6883506 C e canFam3.chr31 13854849 0 + 39895921 C e mm10.chr16 78152839 325 + 98207768 I a score=126163.000000 s hg38.chr21_KI270874v1_alt 123155 24 + 166743 t-----------aaaaaaaaaaaaaGTTTTTAATT s panTro5.chr21 3748768 30 + 33445071 t-----aaaaaaaaaaaaaaaaaaaGTTGTTAATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374573 26 + 46275980 t---------taaaaaaaaaaaaaaGTTGTTAATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3313997 24 - 13858734 t-----------ggaaaaaaaaaaaGTTTTTAATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497036 24 + 32716333 t-----------aaaaaaaaaaaaaGTTTTTAATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452512 28 - 185818997 a-------aaaaaaaaaaaaaaaaaGTTTTTAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276793 27 - 192294377 --------aaaaaaaaaaaaaaaaaGTTTTTAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757809 28 + 9440265 a-------aaaaaaaaaaaaaaaaaGGTTTTAATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486686 27 + 21915920 --------aaaaaaaaaaaaaaaaaGTTTTTAATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061481 24 - 90373283 -----------aaaaaaaaaaaaaaGTTTTTAATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246889 28 + 4234846 a-------aaaaaaaaaaaaaaaaaGTTTTTAATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245014 19 - 13750039 ----------------aaaaaaaaaGTTTTTAATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21968965 35 + 50472720 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaTTAATT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063116 26 + 13128814 ---------aaaaaaaaaaaTAATAATAATTAATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639535 24 - 14377064 -----------taaaaaaaaaaaaaaaaGTTAATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8777873 20 + 9889416 ---------aaaaaaaaaattaaaa------aatt i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1125406 8 + 2694913 -----------------ggaaaaaa---------- i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20780401 19 - 38779656 ------taaaaaaaaaaaaaaaaaa---------- i otoGar3.GL873528 I 1 C 0 e dasNov3.JH568778 3698481 0 - 6883506 C e micMur3.chr31 19229348 459 + 47401472 I e canFam3.chr31 13854849 0 + 39895921 C e mm10.chr16 78152839 325 + 98207768 I a score=147839.000000 s hg38.chr21_KI270874v1_alt 123179 9 + 166743 AAAAAGTGA s panTro5.chr21 3748798 9 + 33445071 AAAAAGTGA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374599 9 + 46275980 AAAAAGTGA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314021 9 - 13858734 AAAAAGTGA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497060 9 + 32716333 AAAAAGTGA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452540 9 - 185818997 AAAAAGTGA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276820 9 - 192294377 AAAAAGTGA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757837 9 + 9440265 AAAAAGTGA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486713 9 + 21915920 AAAAAGTGA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061505 9 - 90373283 AAAAAGTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246917 9 + 4234846 AAAAAGTGA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245033 9 - 13750039 AAAAAGTGA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969000 9 + 50472720 AAAAAGTGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063142 9 + 13128814 AAGAAGTGA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639559 9 - 14377064 AAAAAGTGA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8777893 9 + 9889416 aaaaaGTAA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1125414 9 + 2694913 aaaaaGCGA i proCoq1.NW_012144079v1 C 0 C 0 s otoGar3.GL873528 20780420 9 - 38779656 aaaaaGTGA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13854849 9 + 39895921 AAAAAGTGA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3698481 9 - 6883506 AAAAAGTGA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19229348 459 + 47401472 I e mm10.chr16 78152839 325 + 98207768 I a score=1846572.000000 s hg38.chr21_KI270874v1_alt 123188 134 + 166743 AGGTTTATTGACATTGTGACAACATGGATAATACAGATTAAGTCAGCAAACCATAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATTATTTTCTATACA s panTro5.chr21 3748807 134 + 33445071 AGGTTTATTGACATTGTGACAACATGGATAATACAGATTAAGTCAGCAAACCATAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATTATTTTCTGTACA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374608 134 + 46275980 AGGTTTATTGACATTGTGACAACATGGATAATACAGATTAAGTCAGCAAACCATAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATTATTTTCTATACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314030 134 - 13858734 AGGTTTATTGACATTGTGACAACATGGATAATACAGATTAAGTCAGCAAACCATAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTATGATTTAGTTATCATTTAGTAGTTCC-AT----TAAATTATCTTCTATACA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497069 134 + 32716333 AGGTTTATTGACATTGTGACAACATGGATAATACGGATTAAGTCAGCAAACCATAAAGATTTTCCAGAGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATAATTTTCTATACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452549 133 - 185818997 AGG-TTATTGACATTGTGACAACAAGGATAATATGGATTAAGTCAGCAAACCACAAAGATTTTCCAGCGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATAATTTCCTATACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276829 133 - 192294377 AGG-TTATTGACATTGTGACAACAAGGATAATATGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATAATTTCCTATACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757846 133 + 9440265 AGG-TTATTGACATTGTGACAACAAGGATAATATGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATAATTTCCTATACA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486722 133 + 21915920 AGG-TTATTGACATTGTGACAACAAGGATAATATGGATTAAGTCAACAAACCACAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATAATTTTCTATACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061514 133 - 90373283 AGG-TTATTGACATTGTGACAACAAGGATAATACGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTCTAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATAATTTTCTATACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2246926 133 + 4234846 AGG-TTATTGACATTGTGACAACAAGGATAATACGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTCTAATTTAGTTATCATTTAGTAGTTCC-AT----TAAATAATTTTCTATACC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245042 133 - 13750039 AGG-TTATTGACATTGTGACAACAAGGATAATACGGATTAAGTCAGCAAACCACAAAGATTTTCCAGTGTGCCT-AATGTCTAAAATTATAATTTAGTTATCATTTACTAGTTCC-AT----TAAATAATTTTCTATACA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969009 131 + 50472720 GGGTTTATTGACATTGGGACAACATGAATAATATGGATTAAGTCAGCAAACCAT---CATGTTCCAGTGTGCCT-AATGTCTAAGGTTACAATTTAGTTATCATTTAATAGTTCC-AT----TAAATAATTTTCTATACA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063151 131 + 13128814 GGGTTTATTGACATTGGGACAACATGGATAATATGGATTAAGTCAGCAAACCAT---GATGTTCCAGTGTGCCC-AATGTCTAAGGTTACAATTTAGTTATCATTTAATAGTTCC-AT----TAAATAATTTTCTATACA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639568 131 - 14377064 GGGTTTATTGACATTGGGACAACATGGATAATATGGATTAAGTCAGCAAACCAT---GATGTTTCAGTGTGCCT-AATGTCTAAGGTTATAATTTAGTTATCATTTAATAGTTCC-AT----TAAATAATTTTCTATATA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8777902 131 + 9889416 GGGTTTATTGACATTGGGACAACATGGATAATACGGATTAAGTCAGCAAACCAT---GATGTTCCAGTGTGCCT-AATGTCTAAGGTTACAATTTAGTTATCATTTAATAGTTCC-AT----TAAATAATTTTCTATACA i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1125423 133 + 2694913 AAGTTTATTGACATAATGAAAATATTTTTAAAATGGATTAAGTCAGC-AACCATAAAGATGTTTCCATGTGCCT-AATACCTAAAATTATAATTTAGTTATCATTTAGTAGTTTT-GT----TAAATAATTTTCTATACA i proCoq1.NW_012144079v1 C 0 M 1361 s otoGar3.GL873528 20780429 133 - 38779656 AACTTCATTGACATTATGACAATATTATAAATATGGATTAAGTCAGC-AACCATAAAGATGCTTCAATGTGCCT-AATATCTAAAATTATAATTCAGTTTTCATTTAGTAGTGTC-AC----TAAATAATTTTTGATGCA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78153164 126 + 98207768 AGGTTTATTAGC--------AGCATGGATCATAAACACTAAGTTGAT-AGCCATAAACACCTTTCAGGGTGCCC-AGGATCTAAATATACAATTTAGTTGTCATTTAGTGGTTTCTAT----TAAATAACCTTCTACAGT i mm10.chr16 I 325 C 0 s canFam3.chr31 13854858 125 + 39895921 --------GGATTTTTTGACAACATGAATCCTATGGGTTTAGCCAGC-AACCATAAAGATATTGCAGTATGCCT-AATACCTAAAATTGCAATCTACCTATCATTTAGTAGCTTC-AT----TAAATAATTTTCTATATA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3698490 129 - 6883506 GGATTTATTGAC--------AACGCAGATCATGTGGACAAAGTCAGC-AACCAATAAAATGTTCCAGTGTGCCTAAATGCCTAAAATTGCAATGTAGTTAACACTGAG-AGTTTC-ATTAAATAAATAATTTTCTATATA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19229348 459 + 47401472 I a score=986651.000000 s hg38.chr21_KI270874v1_alt 123322 79 + 166743 GGTAATCACGTATTTG---ATTTCTTTT------CCAATATAGGCAATTTTAAACTCAGAGAGCTGGAACTAATAAAACCTAGGGAAT s panTro5.chr21 3748941 79 + 33445071 GGTAATCACGTATTCG---ATTTCTTTT------CCAATATAGGCAATTTTAAACTCAGAGACCTGGAACTAATAAAACCTAGGGAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374742 79 + 46275980 GGTAATCACGTATTCG---ATTTCTTTT------CCAATATAGGCAATTTTAAACTCAGAGAGCTGGAACTAATAAAACCTAGGGAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314164 79 - 13858734 GGTAATCACGTATTCG---ATTTCTTTT------CCAATATAGGCAATTTTAAACTCAGAGAGTTGGAACTAATAAAACCTAGGGAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497203 79 + 32716333 GGTAATCACGTATTCG---ATTTCTTTT------CCAAAACAGGCAATTTTAAACTCAGAGAGTTGGAACTAATAAAACCTAGGGAAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452682 79 - 185818997 GGCAATCATATATTCA---ATTTCTTTT------CCAATATAGGCAATTTTACACTCAGGGAGTTGAAACTAATAAAACCTAGGGAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162276962 79 - 192294377 GGTAATCATATATTCA---ATTTCTTTT------CCAATATAGGCAATTTTACACTCAGGGAGTTGAAACTAATAAAACCTAGGGAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8757979 79 + 9440265 GGTAATCATATATTCA---ATTTCTTTT------CCAATATAGGCAATTTTACACTCAGGGAGTTGAAACTAATAAAACCTAGGGAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486855 79 + 21915920 GGTAATCATATATTCA---ATTTCTTTT------CCAATATAGGCAATTTTACACTCAGAGAGTTGAAACTAATAAAACCTAGGGAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061647 79 - 90373283 GGTAATCATATATTCA---ATTTCTTTT------CCAATATAGGCAATTTTACACTCAGAGAGTTGAAACTAATAAAACCTAGGGAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247059 79 + 4234846 GGTAATCATATATTCG---ATTTCTTTT------CCAATATAGGCAATTTTACACTCAGAGAGTTGAAACTAATAAAACCTAGGGAAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245175 79 - 13750039 GGTAATCATATATTCA---ATTTCTTTT------CCAATATAGGCAATTTTACACTCAGAGAGTTGAAACTAATAAAACCTAGGGAAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969140 79 + 50472720 GGCAATCACATATTCC---ATTTATTTT------CTAATATAGGCAATTTTAAACTCAGAGAGTTGGAACTAATAAAACCTGGGGAAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063282 79 + 13128814 GGTAATCACATATTCC---ATTTATTTT------ACAATATAGGCAATTTTAAACTCAGAGAGTTGGAACTAATAAAGCCTGGGGAAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639699 79 - 14377064 GGTAATCACATATTCC---ATTCATTTT------CCAATATAGGCAATTTTAAACTCAGAGAGTTGGAACTAATAAAACCTGGGGAAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778033 79 + 9889416 GGTAATCACATATTTC---ATTTATTTT------CCAATATAGGCAATTTTAAACTCAGAGTGTTGGAAGTAATAAAACCTGGGGAAG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20780562 88 - 38779656 GGTAAGCTTATATTCCTGTATTCCTTTTCTTCCCCCAATACAAACAACTTTAAACTCAGAGAATTGGAAATAATAAAATCTGGAAGAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78153290 72 + 98207768 AGTAA-CACATGCCCA---TTTTGTTCT------TCAGAATAG------TTAAATTCACGTAACTAGAGCTAGTAAAAGCTGATGAAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13854983 78 + 39895921 GGTAATTATATGTTCC---TTTTCTTTT------CCAATGTAGGTAAACTTGAACTCAAAGAATTGGAA-TAAGTAGGTCTGTGGAGG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3698619 79 - 6883506 GTTAATCATGTATTTT---TTTTTCTTT------GCAGTATCAGTGATTTTAAACTCAAAGAATTGGAACTATTAAAATCTGGGCCAG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M e micMur3.chr31 19229348 459 + 47401472 I a score=36769.000000 s hg38.chr21_KI270874v1_alt 123401 4 + 166743 -GGAA s panTro5.chr21 3749020 4 + 33445071 -GGAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374821 4 + 46275980 -GGAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314243 4 - 13858734 -GGAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497282 4 + 32716333 -GGAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452761 4 - 185818997 -GGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162277041 4 - 192294377 -GGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8758058 4 + 9440265 -GGAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486934 4 + 21915920 -GGAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061726 4 - 90373283 -GAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247138 4 + 4234846 -GGAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245254 4 - 13750039 -GGAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969219 4 + 50472720 -GGAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063361 4 + 13128814 -GGTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639778 4 - 14377064 -GGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778112 4 + 9889416 -GGAA i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19229807 4 + 47401472 -ggaa i micMur3.chr31 I 459 C 0 s otoGar3.GL873528 20780650 4 - 38779656 -GAAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78153362 4 + 98207768 -AGAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13855061 4 + 39895921 -GGAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3698698 4 - 6883506 ggga- i dasNov3.JH568778 C 0 I 1159 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M a score=1697236.000000 s hg38.chr21_KI270874v1_alt 123405 124 + 166743 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCTTTGAAAAAATTAAGCCCAACCTCCAAACACAGACTATATAAAAATTATTTATAATTTGCAGGTATTAGTGGCTTAATACA s panTro5.chr21 3749024 123 + 33445071 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATGAACCCTTGAAAAAATTAAGCCCAACCTCCAAACACAGACTATATAAAAA-TATTTATAATTTGCaggtattagtggcttagtaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374825 123 + 46275980 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAAAATTAAGCCCAACCTCCAAACACAGACTATATAAAAA-TATTTATAATTTGCAGGTATTAGTGGCTTAGTACA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314247 124 - 13858734 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAGCCCTTGAAAAAATTAAGCCCAACCTCCAAACACAGACTATATAAAAATTATTTATAATTTGCAGGTATTAGTGGCTTAAAACA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497286 124 + 32716333 ATCTAAATTATGAACCATTCTTTTACAAATTCCATGATTAACCCTTAAAAAAATTAAGCCCAACCTCCAAACACAGACTATATAAAAATTATTTCTAATTTGCAGGTATTAGTGGCTTAATACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452765 124 - 185818997 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAACATTAAGACCAACCTCCAAACACAGACTACATAAAAATTATTTATAATTTGCAGGTATTAGTGGCTTAATACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162277045 124 - 192294377 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAACATTAAGACCAACCTCCAAACACAGACTACATAAAAATTATTTAtaatttgcaggtattagtggcttaataca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8758062 124 + 9440265 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAACATTAAGACCAACCTCCAAACACAGACTACATAAAAATTATTTATAATTTGCAGGTATTAGTGGCTTAATATA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8486938 124 + 21915920 ATCTAAATTATAAACCATTCTTTTACAGATTCCGTGATTAACCCTTGAAAACATTAAGACCAACCTCCAAACACAGACTACATAAAAATTATTTAAAATTTGCAGGTATTAGTGGCTTAATACA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061730 123 - 90373283 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCC-TGCAAACATTAAGACCAACCTCCAAACACAGACTACATAAAAATTATTTAtaatttgcaggtgttagtggcttaataca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247142 124 + 4234846 ATCAAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAACATTAAGACCAACCTCCAAACACAGACTATATAAAAATTATTTATAATTTGCAGGTATTAGTGGCTTAATACA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245258 124 - 13750039 ATCTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAACATTAAGACCAACCTCCAAACACAGACTATATAAAAATTATTTATAATTTGCAGGTATTAGTGGCTTAATACA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969223 124 + 50472720 ATTTAAATTATAAACCATTCTGTTACAGATTCCATGATTAACCCTTGAAAAAATTATACCCAACCTCCAAACACAGACtatataaaaattatttataatttaCAGATATTCATGGCTTAAAATA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063365 123 + 13128814 ATTT-AATTTTAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAAAATTAAGCCCAACCTCCAAACACAGACtatataaaaattatttataatttaCAGATATTAGTGGCTTAATAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639782 124 - 14377064 ATTCAAATTATAAACCATTCTTTTACGGATTCCATTATTAACTCTTGAAAAAATTAAGCCCAACTTCCAAACACAGACTACATAAAAATTACTTATAATTTACAGATATTAGTGGCTTAATATA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778116 124 + 9889416 ATTTAAATTATAAACCATTCTTTTACAGATTCCATGATTAACCCTTGAAAAAATTAAGACCTACCTCCAAACACAGACTATATAAAAATTATTTATAATTTACAGATATTAGTGGCTTAATATG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19229811 124 + 47401472 atctaaattataaaCCATTCTTTAACTGATTCCATGAATCACTTTTGGCAAAACTAAGCCCATCCTCCCACTACAGGCTACACAAAATTTATTTCTAATTCGCAGGTATCAATGACTTAATACA i micMur3.chr31 C 0 I 23 s otoGar3.GL873528 20780654 123 - 38779656 ATCTAAATTATAAACCATTCTTTGACTGGTTCTGTGACTCACCTTTGGCAAAACCACACCCATTCTTCCATGACAGGTTACATAAAA-GGAGGTATAATTTACAGGTATTAGTGACTTAATACA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78153366 117 + 98207768 ATTT--ACTATAAACCATCCTTTAACTGGTTCTACAATGCAGTCCTGACAGTATTAACTCC-TCACCCTACTAATGGCTATGAGAAAGTTACT----ATTTGTGAGTAATAGTGAGTCGGTGTA i mm10.chr16 C 0 C 0 s canFam3.chr31 13855065 118 + 39895921 ATCTAAATTATAAGTCATT-TTTTACTGATTCCATGAATCACCCTTGCCA-----AAGCCTATCTTCCCACTACAGGACATGAGAAAATTATTTGTAATTTTCAGGCATTAGTGATTTTATATA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3699861 124 - 6883506 ATCTAAATTATAAACCATTCTCTTGCTTGTTTCATGGCTAACCCTTGGCAAAATTAAGCCCATCTTTCCACACCAGATTACAAGAAAATTATCTATAATTTTCAGGGATTTGTAACTTTCTACA i dasNov3.JH568778 I 1159 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M a score=230008.000000 s hg38.chr21_KI270874v1_alt 123529 22 + 166743 GCATATATTTGCTATCAGCTTT s panTro5.chr21 3749147 22 + 33445071 gcatatattctctatcagcttt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374948 22 + 46275980 GCATATATTCTCTGTCAGCTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314371 22 - 13858734 GCATATATTCACTATCAGCTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497410 22 + 32716333 GCATATATTCTCTATCAGCTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452889 22 - 185818997 GCATATATTCTCCATCAGTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162277169 22 - 192294377 gcatatattctccatcagtttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8758186 22 + 9440265 GCATATATTCTCCATCAGTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8487062 22 + 21915920 GCATATATTCTCCATCAGTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061853 22 - 90373283 gcatatattctccatcagcttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247266 22 + 4234846 GCATATATTCTCCATCAGTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245382 22 - 13750039 GCATATATTCTCCATCAGTTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969347 19 + 50472720 GCATATA-TTCTCA--AGTTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063488 21 + 13128814 GCATATA-TCTCCATGAGTTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639906 22 - 14377064 GCATGTATTCTCCATGAGTTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778240 22 + 9889416 GCAAATATTCTCCATGAGTTTT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20780777 22 - 38779656 GCATGCATTCTCCTTGAGTATT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78153483 22 + 98207768 GCATGTGACCTCCTTGGGAGTT i mm10.chr16 C 0 C 0 s canFam3.chr31 13855183 22 + 39895921 GCATATACTCTTCTTGGGTGTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3699985 22 - 6883506 GCATATTCTCCCTTTAGGTGTC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M e micMur3.chr31 19229935 23 + 47401472 I a score=439445.000000 s hg38.chr21_KI270874v1_alt 123551 34 + 166743 TGCATTTT-AAAAGaaaaattaa----------agac-aaaaatct s panTro5.chr21 3749169 34 + 33445071 tgcatttt-aaaagaaaaattaa----------agac-aaaaatct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17374970 34 + 46275980 TGCATTTG-AAAAGaaaaattaa----------agac-aaaaatct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314393 35 - 13858734 TGCATTTT-AAAAGAAAAATTAA----------AGACAAAAAATCT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497432 34 + 32716333 TGCATTTT-AAAAGaaaaattaa----------agac-aaaaatct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452911 34 - 185818997 TGCATTTT-AAAAGAAAAATTAC----------AGAC-AAAAATCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162277191 34 - 192294377 tgcatttt-aaaagaaaaattac----------agac-aaaaatct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8758208 34 + 9440265 TGCATTTT-AAAAGAAAAATTAC----------AGAC-AAAAATCT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8487084 34 + 21915920 TGCATTTT-AAAAGAAAAATTAC----------AGAC-AAAAATCT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061875 34 - 90373283 tgcatttt-aaaagaaaaattac----------agac-aaaaatct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247288 34 + 4234846 TGCATTTT-AAAAGAAAAATTAC----------AGAC-AAAAATCT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245404 34 - 13750039 TGCATTTT-AAAAGAAAAATTAC----------AGAC-AAAAATCT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969366 34 + 50472720 TGCATTTT-AAAAGAAAAATTAA----------CGAT-ACAGATCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063509 34 + 13128814 TGCATTTT-AAAAGAAAAATTAA----------AGAC-ACAGATCT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639928 35 - 14377064 TGCATTTTAAAAAGAAAAATTAA----------AGAC-ACAGATCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778262 34 + 9889416 TGCATTTT-AAAAGAAAAATTAA----------AGAC-ACAGATCT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19229958 34 + 47401472 TGCATTTT-AAAAGAAAAATTAA----------GGAT-AAAAAGCT i micMur3.chr31 I 23 C 0 s otoGar3.GL873528 20780799 30 - 38779656 TGCATTTT-----TAAAAATTAA----------GGAT-AAAAAGCT i otoGar3.GL873528 C 0 I 273 s mm10.chr16 78153505 44 + 98207768 TGCATTTT-AAAGGAAACACTGAGGTTAATGTTAGGT-AATAAACT i mm10.chr16 C 0 I 5 s canFam3.chr31 13855205 21 + 39895921 TGCATTTT-AAAAGAAGGATTG------------------------ i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3700007 34 - 6883506 GGCAATTT-AAAAGAAAAGTTAA----------GGAC-AAAAATGC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M a score=2152692.000000 s hg38.chr21_KI270874v1_alt 123585 161 + 166743 taatacaaagtaataaactactaaTCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATG-AGAAACTGA--TATA-CTTTCTCTCCATAGATGATGAAAAT-AACTTTCTTTGACTACCAAGAAATATATAATCAAATT s panTro5.chr21 3749203 161 + 33445071 taatacaaagtaataaactactaatca--taaaattctcTCCTATAttcttttagaacacaatgaaaggaaattatttgctttttatg-agaaactga--tata-ctttctctccatagatgatgaaaat-aactttctttgactaccaagaaatatatagtcaaatt i panTro5.chr21 C 0 C 0 s panPan2.chr21 17375004 161 + 46275980 taatacaaagtaataaactactaaTCA--TAAAATTCTCTCCTATAttcttttagaacacaatgaaaggaaattatttgctttttatg-agaaactga--tata-ctttctctccatagatgatgaaaat-aactttctttgactaccaagaaatatatagtcaaatt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314428 161 - 13858734 TAATACAAAGTAATAAACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATG-AGAAACTGA--TATA-CTTTCTCTCCATAGATGATGAAAAT-AACTTTCTTTGACTACCAAGAAATATATAGTCAAATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497466 161 + 32716333 taatacaaagtaataaactactaaTCA--TAAAATTCTCTCCTATAAtcttttagaacacaatgaaaggaaactatctgctttttatg-agaaactga--tata-ctttctctccatagatgatgaaaat-aacttgctttgactaccaagaaatatatagtcaaatt i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155452945 161 - 185818997 TAATGCAAAGTAATAAACTACTAGTCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATG-AGAAACTGA--TATA-TTTTCTCTCCATAGATGACGAAAAT-AACTTTCTTTGACCACCAAGAAATGTATAATCAAATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162277225 161 - 192294377 taatgcaaagtaataaACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATG-AGAAACTGA--TATA-TTTTCTCTCCATAGATGACGAAAAT-AACTTTCTTTGACCACCAAGAAATGTATAATCAAATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8758242 161 + 9440265 TAATGCAAAGTAATAAACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATG-AGAAACTGA--TATA-TTTTCTCTCCATAGATGACGAAAAT-AACTTTCTTTGACCACCAAGAAATGTATAATCAAATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8487118 161 + 21915920 TAATGCAAAGTAATAAACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATG-AGAAACTGA--TATA-TTTTCTCTCCATAGATGACGAAAAT-AACTTTCTTTGACCACCAAGAAATGTATAATCAAATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15061909 161 - 90373283 taatgcaaagtaataaACTACTAATCA--TAAAATTCTCTCCTATATTCTTTCAGAACACAATGAAAGGAAATTATTTGCTTTTTATG-AGAAACTGA--TATA-TTTTCTGTCCATAGATGATGAAAAT-GACGTTCTCTGACCACCAAGAAATGTATAATCAAATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247322 155 + 4234846 TAATGCAAAGTAATAAACTACTAATCA--TAAAATT-----CTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATG-AGAAACTGA--TATA-TTTTCTCTCCATAGATGATGAAAAT-AAC-TTCTTTGACCACCAAGAAATGTATAATCAAATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245438 162 - 13750039 TAATGCAAAGTAAGAAACTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTTTTTATg-aggaactga--tatatttttctctccatagatgatgaaaat-AACTTTCTTTGACCACCAAGAAATGTATAATCAAATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969400 160 + 50472720 TAATGCAAAGTAATAAGGTACTAATCA--TAAAATTCTCTCCTCt-ttcttttagaacacaatgaaaggaaattatttgctccttatg-agaaactga--tata-ctttctctctgtagataatgaaagt-aacttgctttgactactgagaaatatatagtcaaatt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063543 155 + 13128814 TAATGCAAAGTAATAAGG------TCA--TAAAATTCTCTCCTATAttcttttagaacaccatgaaaggaaactatttgctccttatg-agaaactga--tata-ctttctctctgtagataatgaaaat-aacttgctttgactaccaagaaatatagagtcaaatt i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9639963 161 - 14377064 TAATGCAAAGTAATAAGGTACTAATCA--TAAAATTCTCTCCTATAttcttttagaacacaatgaaaggaaattatttgctccttatg-agaaaccaa--tata-ctttctctctgtagataatgaaaat-aacttgctttgactaccaagaaatatatagtcaaatt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778296 157 + 9889416 TAAGGCAAAGTAATAAGGTACTAATCA--TAAAATTCTCTCCTATATTCTTTTAGAACACAATGAAAGGAAATTATTTGCTCCTTATG-AGAAACTAA--TA-----TTCTCTCTGTAGATAATGAAAAT-AACTTGCTTTGACTACCAAGAAATATATAGTCAAATT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19229992 160 + 47401472 TCATGCAAAGTAATAAACAACTAATCA--TAAAATTATCTCCTATATT-TTTTAGACAACAATGAGAGGAAATTATTTACTTCTCCTA-AAAAACTGA--TGCA-ATTTCTTTCTGTAGATGAGGAAAAT-AACTTGCTTTAACTACCAAGAAATACAGAGCCAAATT i micMur3.chr31 C 0 I 91 s otoGar3.GL873528 20781102 159 - 38779656 TAATGCAAAGTAACAAACTATGAATCA--TAAATTTTTTTCCTATATTCTTTTAGAACACTAT-----GAAATTATTTGCTTGTCCTA-AGAAACAAAATATTA-ATTTCTTTCTGTAGATCATGAAAATAAACTTGTTCTAATGACCAACAAATACAGAGCCAAATT i otoGar3.GL873528 I 273 C 0 s mm10.chr16 78153554 157 + 98207768 TCATGTTAGGTAATAAACTATTAATCAATCATGACTCTCTCATGGATTCCTGGA-AACATAGTAAAAGTAAA----TTGCTTCTCAAACAGGCACTGA--TATA-ATTTCTCTATACACATGAC--AAAT-AATTGACTTTTACTACAAAAAATCATAGAGCTAAATT i mm10.chr16 I 5 C 0 s canFam3.chr31 13855226 112 + 39895921 -----------------------------------------------TGTCTTAGAACACAAT--AAGAAAACTAtttgcttctcctg-agagactgg--tagg-gtttc--tccatggataatgaaaat-tatttgcttcaaatagcaagatatatagggcgaaatt i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3700041 160 - 6883506 TGATGCAAAGTAATAAACTGCTAAGAA--TAAAATTCTCTCCAATACTCCATTAGAACAAGA-GATGGGAAATTAGTTGCTTATCCTG-AGAAACTGA--TATA-ATTTCTCTCTGTAAGTGATGAAATT-AATTTGCTCTTACTACCAAGAACTATAGAGCCAAATA i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M a score=706644.000000 s hg38.chr21_KI270874v1_alt 123746 77 + 166743 TGTAGACCACT-TTTAATTTTTTAAAAAAATCCT-GGATCTG---TATTTTTTACCTTCCTGACCTCTT----------------------ACTATA-------------------------------ATTTA-TC s panTro5.chr21 3749364 77 + 33445071 tgtagACCACT-TTTAATTTTTTAAAAAAATCCT-GGATCTG---TATTTTTTACCTTCCTGACCTCCT----------------------ACTATA-------------------------------ATTTA-TC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17375165 77 + 46275980 tgtagACCACT-TTTAATTTTTTAAAAAAATCCT-GGATCTG---TATTTTTTACCTTCCTGACCTCCT----------------------ACTATA-------------------------------ATTTA-TC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314589 77 - 13858734 TGTAGACCACT-TTTAATTTTTAAAAAAAATCCT-GGATCTG---TATTTCTTACCTTCCTGACCTCCT----------------------ACTATA-------------------------------ATTTA-TC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497627 77 + 32716333 tgtagACCACT-TTTAATTTTTTTAAAAAATCCT-GGGTCTG---TATTTTTCACCTTCCTGACCTCCT----------------------ACTATA-------------------------------GTTTA-TT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155453106 76 - 185818997 TGTAGACCACT-TTTAATTTTTTT-TTAAATTCT-GGGTCTG---TATTTTTCACATTCCTGACCTCCT----------------------ACTGTA-------------------------------AGTTA-TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162277386 76 - 192294377 TGTAGACCACT-TTTAATTTTTTT-TTAAATTCT-GGGTCTG---TATTTTTCACATTCCTGACCTCCT----------------------ACTGTA-------------------------------AGTTA-TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8758403 76 + 9440265 TGTAGACCACT-TTTAATTTTTTT-TTAAATTCT-GGGTCTG---TATTTTTCACATTCCTGACCTCCT----------------------ACTGTA-------------------------------AGTTA-TT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8487279 76 + 21915920 TGTAGACCACT-TTTAATTTTTTT-TTAAATTCT-GGGTCTG---TATTTTTCACATTCCTGACCTCCT----------------------ACTATA-------------------------------AGTTA-TT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15062070 76 - 90373283 TGCAGACCACT-TTTAATTTTTTT-TTAAATTCT-GGGTCTG---TATTTTTCACGTTCCTGACCTCCT----------------------ACTATA-------------------------------ATTTA-TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247477 76 + 4234846 TGTAGACCACT-TTTAATTTTTTT-TTAAATTCT-GGATCTG---TATTTTTCACGTTCCTGACCTCCT----------------------ACTATA-------------------------------AGTTA-TT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245600 76 - 13750039 TGTAGACCACT-TTTAATTTTTTT-TTAAATTCT-GAGTCTG---TATTTTTCACATTCCTGACCTCCT----------------------ACTATA-------------------------------ATTTA-TT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969560 78 + 50472720 tatagaccatc-tttaatattttttttagatcct-gggtcta---tattttttgtgttcctgatctcca----------------------actata-------------------------------atttattt i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063698 78 + 13128814 taTAGACCATC-TTTAATATTTTTTTAAGATCCT-GGGTCTA---TATTTTTTGTGTTCCTGATCTCCT----------------------ACTATA-------------------------------ATTTATTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9640124 78 - 14377064 tATATACCATC-TTTAATATTTTTTTAAGATCCT-GGGTCTA---TATTTTTTGTGTTCCTGATCTCCT----------------------ACTATA-------------------------------AGTTATTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778453 78 + 9889416 TATAGATCATC-TTTAATATTATTTTAAGATCCT-GGGTCTA---TATGTTTTGTGTTCCTAATCTCCT----------------------ACTATA-------------------------------ATTTATTT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20781261 125 - 38779656 TATAGACCACC---TAATTTTTCC---AGCTCCA-GGGCCTA---TGTTTGTCCCATTCCTGACCTCCTCTTCCAGTTCAGGCGTCCTCAAACTACAGCCCACCGGCCACATGCGGCCCGCCTAGGACATTTA-TC i otoGar3.GL873528 C 0 I 136 s mm10.chr16 78153711 71 + 98207768 TGCAGATATCT-T---ATTTCTCC---AGCCATT-GGACATATCTTACTGTTCCCATTTCTGAAGT-------------------------GTTATA-------------------------------ATTCA-TG i mm10.chr16 C 0 I 31 s canFam3.chr31 13855338 77 + 39895921 tacagaccacc-tttattaacttttgcagatctt-aggccta---tgtatttcccattcttgatcttgt----------------------attaca-------------------------------attga-ta i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3700201 76 - 6883506 GGCAGATCATTCTTTAACTTTTTC---AGATCCTGGGGCCTC---TACTTTTCCCATTCCTGATCTCAC----------------------ACTATA-------------------------------ATGTA-TG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M e micMur3.chr31 19230152 91 + 47401472 I a score=4651234.000000 s hg38.chr21_KI270874v1_alt 123823 359 + 166743 TTTTCTCTGG---TCCTGAATCTCTGTAAGCTGACTTGCTTTCAGGGGAATGACACTGTGCACATAATA-CAGCATCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCACCACCCTGTCCCACCTGTCCACAAACAGTTTGGAAGTTTCCTCTTTTCAGCTTTCCTCTTTCCAAACTTAAGCTTCCGTATGTACAATGTAGCTC-TCTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAGATCAGTCTGTAGTTTTTCCATCTGTCCTCCGTTGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATGTGAGATT--------------------------------------------------------------------------TGTGCCTCTACTTGAC s panTro5.chr21 3749441 359 + 33445071 TTTTCTCTGG---TCCTGAATCTCTGTAAGCTGACTTGCTTTCAGGGGAATGACACTGTGCACATAATA-CAGCACCACCTGGGTCTTCCAACATTTGGTCTCCACCATCACCTCACCACCACCCAGTCCCACCTGCCCACAAACAGTTTGGAAGTTTCCTCTTTTCAGCTTTCCTCTTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TCTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAGATCAGTCTGTAGTTTTTCCATCTGTCCTCCGTTGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATGTGAGATT--------------------------------------------------------------------------TGTGCCTCTACTTGAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17375242 359 + 46275980 TTTTCTCTGG---TCCTGAATCTCTGTAAGCTGACTTGCTTTCAGGGGAATGACACTGTGCACATAATA-CAGCACCACTTGGGTCTTCCAACATTTGGTCTCCACCATCACCTCACCACCACCCAGTCCCACCTGCCCACAAACAGTTTGGAAGTTTCCTCTTTTCAGCTTTCCTCTTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TCTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAGATCAGTCTGTAGTTTTTCCATCTGTCCTCCGTTGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATGTGAGATT--------------------------------------------------------------------------TGTGCCTCTACTTGAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3314666 359 - 13858734 TTTTCTTTGG---TCCTGAATCTCTGTAAGCTGACTTGCTTTCAGGGGAATGACACTGTGCACATAATA-CAACACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCACCACCCAGTCCCACCTGCCCACAAACAGTTTGGAAGTTTCCTCTTTTCAGCTTTCCTCTTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TCTCCTACTTA-----AAGAAAAATAAATTCAGAGTGACCCTCCTAAAGTTGTGAAATAAGATAAGTCTGTAGTTTTTCCATCTGTCCTCCGTTGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATGTGAGATT--------------------------------------------------------------------------TGTGCCTCTACTTGAC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4497704 359 + 32716333 TTTTCTCTGG---TCCTGAATCTCTGCAAGCTGACTTGCTTTCAAGGGAATGGCACTGTGCATCTAATA-CAGCACCACCTGGGTCTCCCAAGATTTGGTCTCCACCATCACCTCACCACCACCCAGTCCCACCTGCCCACAAACAGTTTGGAAGTTTGCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TCTCCTACTTT-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTAAAATAAGATCAGTCTGTAGTTTTTCCCTCTGTCCTCCGTTGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATGTGAGATT--------------------------------------------------------------------------TGTGCCTCTACTTGAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155453182 359 - 185818997 TTTTCTCCGG---TCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGCGAATGACACTGTGTACATAATA-CAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCATGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATACAGCTC-TTTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATCTGAAATT--------------------------------------------------------------------------CGTGCCTTTATTTGAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162277462 359 - 192294377 TTTTCTCCGG---TCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGCGAATGACACTGTGTACATAATA-CAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCATGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATACAGCTC-TTTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATCTGAAATT--------------------------------------------------------------------------CGTGCCTTTATTTGAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8758479 359 + 9440265 TTTTCTCCGG---TCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGCGAATGACACTGTGTACATAATA-CAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCATGAACCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TTTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATCTGAAATT--------------------------------------------------------------------------CGTGCCTTTATTTGAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8487355 359 + 21915920 TTTTCTCCGG---TCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGCGAATGACACTGTGTACATAATA-CAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTCACCATGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TTTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATCTGAAATT--------------------------------------------------------------------------TGTACCTTTATTTGAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15062146 359 - 90373283 TTTTCTCTGG---TCCTGAATCTCTGTAAGCTGACTTGCTCGCAGGGGAATGACACTGTGTACATAATA-CAGCACCACCTGGGTCTTCCAAGATTTGGTCTCCACCATCACCTGACCACGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TTTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG-------------------------------------GCAGGCTC---------------CCAGGACCTCCAATATCTGAAATT--------------------------------------------------------------------------TGTGCCTTTATTTGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247553 359 + 4234846 TTTTCTCTGG---TCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGCGAATGACACTGTGTACATAATA-CAGCACCACCTGGATCTTCCAAGATTTGGTCTCCACCATCACCTCACCACGACCCAGTCCCACCTGCCCACAAACAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TTTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGCAGTTTTTCCCTCTGTCCTCCTTAGAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATCTGAAATT--------------------------------------------------------------------------TGTGCCTTTATTTGAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 245676 359 - 13750039 TTTTCTCTGG---TCCTGAATCTCTGTAAGCTGACTTGCTTGCAGGGGAATGACACTATGTACATAATA-CAGCACCACCTGAGTCTTCCAAGATTTGGTCTCCACCATCACCTTACCACGACCCAGTCCCACCTGCCCACAGATAGTTTGAAAGTTTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCCATATGTACAATATAGCTC-TTTCCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCCTAAAGTTGTGAAATAAAATCTGTCTGTAGTTTTTCCCTCTGTCCTCCTTACAGTCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGACCTCCAACATATGAAATT--------------------------------------------------------------------------TGTGCCTTTATTTGAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969638 358 + 50472720 ttttctctgc---ttctgaATCTCTGTAAACTGACTTGCTTTCAGGGAAATAACACTGTGCAT-TAATA-TAGCACAACCTGCATCTTCCAAGATTTGGTCTCCACTATCACCTCACCACCACCCAGTCACACCTGCCCACAAACACTTTGGAAGTGTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCTATATGTATCATATAGCTC-TCTTCTACTTA-----AAGAAAAATGAATTCAGAGTGATCCTCATAAAGTTGTGAAATAAGATCAGTCCGTAGTTTTTCCCTCTGTCCTCCTTAGAATCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGATCCCCAATACGTGAGATT--------------------------------------------------------------------------TGTGCCTCTACTCGAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5063776 359 + 13128814 TTTTCTCTGG---TTCTGAATCTCTATAAACCGACTTGCTTTCAGGGGAATAACACTGTGCATGTAATA-TAGCACAACCTGTGTCTTCCAATATTTGGTCTCCACCATCACCTCACCACCACTCAGTCACACCTGCCCACAAACACTTTGGAAGTGTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCTATATGTATAATATAGCTC-TCTTCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCATCAAGTTGTGAAATAAGATCAGTCCATAGTTTTTCCCTCTGTCCTCCTTAGAATCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGATCTCCAACATGTGAGATT--------------------------------------------------------------------------TGTGCCTCCACTCGAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9640202 350 - 14377064 TTTTCTCTGG---TTCTGAATCTCTGT---TTGACTTGCTTTCAGGGGAATAACACTGTGCATGTAATA-TAGCACAACCTGTGTCTTCCAAGATGTGGTCTCCACCATCACCTCACCACCACCCAGTCACGCCTGCCCACAAACACTCTGGAAGTGTCC-----TCAGCTTTCCTCCTTCCAAACTTAAGCTTCTATATGTATAATACAGCTC-TCTTCTACTTA-----AAGAAAAATAAATTCA-AGTGATCCTCATAAAGTTGTGAAATAAGATCAGTCCATAGTTTTTCCCTCTGTTCTCCTTAGAATTCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGATCTCCAACACGTGAGATT--------------------------------------------------------------------------TGTGCCTCTACTCGGC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778531 359 + 9889416 TTTTCTCTGG---TTGTGAATCTCTGTAAACTGATTTGCTTTCAGGAGAATAACACTGTGCATGTAATA-TAGCACGACCTGTGTCTTCCAAGATTTGGTCCCCACCATCACCTCACCACCACCCAGTCACACCTGCCCACAAACACTTCGGAAGTGTCCTCTTTTCAGCTTTCCTCCTTCCAAACTTAAGCTTCTATATGTATAATATAGCTC-TCTTCTACTTA-----AAGAAAAATAAATTCAGAGTGATCCTCATAAAGTTGTGAAATAAGATCAGTCCATAGTTTTTCCCTCTGTCCTCCTTAGAATCCTCCTGG-------------------------------------TCAGGCTC---------------CCAGGATCTCCAACACGTGAGATT--------------------------------------------------------------------------TGTGACTCTACTCGAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19230243 353 + 47401472 TTTTTTCTGG---TCCTGAATTTTTATAAGTTGACTTGCT-TCGGGGTGATGAAACTGTGTGCATCATACCAGCACCATCTGTGTCTTCTAATATTTCATC-CCACCATA-----GCTACCACCCAATCCCACCTCCCCACAAACAGTTTGGAAGTTTTCTCTTTTCAGCTTTCCTCCTCCCAAGCTTCAGCTTCCATATGTACGATACAGCTT-TCACCTACTTG-----AAGAAACATTAACTCAGAATGATCTTAATAAAATTGTGAAATAAGATCAGTCTGTGGGTTTTCCCTCTGTCCTTCTTAGAGTCCTACTGG-------------------------------------TCAGGTTC---------------CCAGAACCCCCAACACAAGGGCTT--------------------------------------------------------------------------TCTGCTTCCACTCAGC i micMur3.chr31 I 91 C 0 s otoGar3.GL873528 20781522 354 - 38779656 TTCTCTCTGG---TCCTGAATTTGTATCAGCTGACTTGCTCTCACGGGAATGAAATCATGTGCATCATACCAGGCCCATCTGTGTCTCCTAAGATTTCGTC-CCACCATC-----ACCACCTCCCAATCCCATCTCCCCACAAATGATTCGGAAGTTTTCTCTATTCAGTTTTCTTCCTTCCAAACTTCAGCTTCCATATGTATAATCTAGCTT-TCTGCTACTTGAAAAAAAAAAAAATTACCTCAGAGCAATCTTAGT-AACCTGTGAAATAAGATCAGGCTGTGGGTTTTCCCTCTCTTTCCC----AGTCCTACCAG-------------------------------------TCCAGTTC---------------CCTGATCCCCCAACACAAAGACTT--------------------------------------------------------------------------CGTGCTTCTACTCAGC i otoGar3.GL873528 I 136 C 0 s mm10.chr16 78153813 299 + 98207768 TTTTTTATGA---TCCTGAATCTGTGAAAGTTTATTT-CTCTCAGGG-----------------TAATT-GAGCCTCA------TTTTCTAAAGTCTTGACATCACAATCCCACCTCC----CCTAGCCTAAC--ACCCACCAACAGTTTGGAAGTTTCATCTTTCCACATTT----------------AACTTTGATGGGTGTAATTTACTTC-TCTCTTACtta-----aataaa-attaatttaaaatGATACCCATAAAAGTGTGTAATAAA------------TGTTTCCCTCTGACTTTCGGAGGGGCTCTGTGT-------------------------------------TCTGGCTT---------------GCAGAACCTCC-CTGGCTGGGTTT--------------------------------------------------------------------------TGTACATTTACTTAGC i mm10.chr16 I 31 C 0 s canFam3.chr31 13855415 347 + 39895921 ttttctctgg---tcctgaatttttaTAAGCTGCCTTGCTTTCTAGGGAATAAAGCTACGTGTGCAATACCAGCATTACTTGTGTCTTCCAGGAT-TGGTCCCCACCATC-----------ACCCAAGCCCACAAGCCCACATACTGTGTGAAAGTGTCCTTGTTTCAGCTCTCCATTTTCCATACTTAAGCTTCCATATATGTAATATTGTTCATCTCCTACTTA-----AAGAAAAGTTAATTGAGAATGA--CTCCTAAAATTGTGAAGGAAGATCGATCTGT--TCTTTACCTCTATCCTCCTCAGAGTCTTCCCGGTA-----------------------------------TTAGGCTT---------------CCAAGACCCCTGCCATACAGACCT--------------------------------------------------------------------------TGAACCTCTACTCAGC i canFam3.chr31 C 0 I 138 s dasNov3.JH568778 3700277 418 - 6883506 TTTTTTCTGGTCCTCCTGAATTTTTGTAAGCTGACTCACTCTCTGCAGAATGAAGTTATCTGCATACTACCTGCCCTGCCTGGGTCTTCCAAAATTTGGTCCCCACCA---------CAATATCCAATCTCATTCCC------AGAGTTTGGAACTTTTCTCTTTT--------------------------------------------------------CTTG-----AAGAAAAATTAATTCAGAGTAACCCTAGTAAA-TTCTGAGAAAAGATCAGCTGGTGGTCCTTTCCTCAGTCCTCCTGAGAGTCCTCCTGGTGACAAGATGGCTGCCACAGCAGCCTTGTGCCTCTCCTCAGTCTCTGCTTTGTCCTGGATCCATGTTCTCCATCTCATCAAACTTCCCATTCCTGCTCCAAACATTGTTTATTTTCTCACTTCAATAATAAAATGGCTTTGTAGTAAAAATTGAGGCATGCGTATGTAGTTAAT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M a score=3072121.000000 s hg38.chr21_KI270874v1_alt 124182 256 + 166743 ------------------CCTTG---------GCATCGA------------ACCAAGCC-----------------AAATTCCTCTTCAGATGTAGAT---------------------GGGCAATGTT-------------------------------------------------------------------------TTCTAATTTACACAGGGCTTGTA-CCTTACCCCATTTACTCAAAT-AAATAATA--------------------------ACACTTAAA---------TTTTCTACATTACATGCACACGTTTCTC--AAAAAAATTATCTACGGAATTTATCTTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAAGACTTCTTAGTTCCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- s panTro5.chr21 3749800 256 + 33445071 ------------------CCTTG---------GCATCGA------------ACCAAGCC-----------------AAATTCCTCTTCAGATGCAGAC---------------------GGGCCATGTT-------------------------------------------------------------------------TTCTAATTTACACAGGGCTTGTA-CCTTACCCCATTTACTCAAAT-AAATAATA--------------------------ACACTGAAA---------TTTTCTACATTACATGCACATGTTTCTC--AAAAAAATTATCTACAGAATTTATCTTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAAGACTTCTTAGTTCCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17375601 256 + 46275980 ------------------CCTTG---------GCATCGA------------ACCAAGCC-----------------AAATTCCTCTTCAGATGCAGAC---------------------GGGCCATGTT-------------------------------------------------------------------------TTCTAATTTACACAGGGCTTGTA-CCTTACCCCATTTACTCAAAT-AAATAATA--------------------------ACACTGAAA---------TTTTCTACATTACATGCACATGTTTCTC--AAAAAAATTATCTACAGAATTTATCTTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAAGACTTCTTAGTTCCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3315025 256 - 13858734 ------------------CCTTG---------GCATCGA------------ACCAAGCC-----------------AAATTCCTCTTCAGATGCAGAC---------------------GGGCAATGTT-------------------------------------------------------------------------TTCTAATTTACACAGGGCTTGTA-CCTTACCCCATTTACTCAGAT-AAATAATA--------------------------ACACTTAAA---------TTTTCTACATTACATGCACATGTTTCTC--AAAAAAATTATCTACGGAATTTATCTTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAAGACTTCTTAGTTCCATTTATTGTCAAAGAGGAAAT-GTAGTGGG- i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4498063 255 + 32716333 ------------------CCTTG---------GCATCCA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAC----------------------GGCAATGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-CCTTACCCCATTTACTCAAAT-AAATACTA--------------------------ACACTTAAA---------TTTTCTACACTACATGCACATGTTCCTC--AAAAAAATTATCTATGGAATTTATATTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAACACTTCTTAGTTCCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155453541 255 - 185818997 ------------------CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT-----------------------GCAGTGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-TCTTACCCCGTTTACTCAAAT-AAATAATA--------------------------ACACTTAAA---------TTTTTTACATTACATGCACATGTTTCTC-AAAAAAAATTATCTATGGAATTTATATTAATCGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162277821 255 - 192294377 ------------------CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT-----------------------GCAGTGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-TCTTACCCCGTTTACTCAAAT-AAATAATA--------------------------ACACTTAAA---------TTTTTTACATTACATGCACATGTTTCTC-AAAAAAAATTATCTATGGAATTTATATTAATCGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8758838 255 + 9440265 ------------------CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT-----------------------GCAGTGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-TCTTACCCCGTTTACTCAAAT-AAATAATA--------------------------ACACTTAAA---------TTTTTTACATTACATGCACATGTTTCTC-AAAAAAAATTATCTATGGAATTTATATTAATTGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8487714 255 + 21915920 ------------------CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAGATGCAGAT-----------------------GCAGTGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-TCTTACCCCGTTTACTCAAAT-AAATAAAA--------------------------ACACTTAAA---------TTTTTTACATTACATGCACATGTTTCTC-AAAAAAAATTATCTATGGAATTTATATTAATCGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15062505 257 - 90373283 ------------------CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT---------------------GGGCAGTGTT-------------------------------------------------------------------------TTCTAATTTACACAGGGCTTGTA-GCTTACCCCGTTTACTCAAAT-AAATAATA--------------------------ACACTTACA---------TTTTCTACATTACATGCACATGTTTCTC-AAAAAAAATTATCTATGGAATTTATATTAATCGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2247912 255 + 4234846 ------------------CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT-----------------------GCAGTGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-CCTTACCCCGTTTACTCAAAT-AAATAATA--------------------------ACACTTAAA---------TTTTCTACATTACATGCACATGTTTCTC-AAAAAAAATTATCTATGGAATTTATATTAATCGTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTATTGTCAAAGAGGAAAT-GGAGTGGG- i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 246035 255 - 13750039 ------------------CCTTG---------GCATCAA------------ACCAAGCC-----------------AAATTCCTCTTCAAATGCAGAT---------------------GGGCAGTGTT-------------------------------------------------------------------------TTCTAATTTACAGAGGGCTTGTA-CCTTACCCCGTTTACTCAAAT-AAATAATA--------------------------ACACTTAAA---------TTTTCTACATTACATGCACATGTTTCTC---AAAAAATTATCTATGGAATTTATATTAATTGTATTTATTTTAAATATTTCTGGAAAAGCATTCCTAAGGAGCACTTCTTAGTTTCATTTACTGTCAAAGAGGAAGT-GGAGTGGG- i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21969996 253 + 50472720 ------------------CCTTG---------GCTTTGA------------ACCAAGCC-----------------AAATGCCTCTTCAAATGCAGAT---------------------GGACAGTGTT-------------------------------------------------------------------------TTCTAATTTACACAGGACTTGGA-CCTTACCTCACTTACTCAAAT-AAATACTA---------------------AT---ACACTTAAA----------TTTTTACATTACATGCACATGTTTCTC--AAAAAACTTATCAATAGaatttatattaattttatttgttttaaatatttCTGGAAAAGCATTCCTTGGGCA---TT-TTAGTTTCATTTATTGTCAAAGAAGAAAT-AGAGTGCA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5064135 254 + 13128814 ------------------CCTTG---------GCTTTGA------------ACCAAGCC-----------------AAATGCCTCTTCAAATGCAGAT---------------------GGACAGTGTT-------------------------------------------------------------------------TTCTAATTTTCACAGGACTTGTA-CCTTACCTCACTTACTCAAAT-AAATAATA---------------------AT--AACACTCAAA---------TTTTTTACATTACATGCAC--GTTTCTC--AAAAAAC--ATCAGtataatttttattaattgtatttgttttaaatatttCTGGGAAAGCATTCCTTGGGAACAGTT-TTAGTTTCATTTATTGTCAAAGAAGAAAT-GGAGTGCG- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9640552 258 - 14377064 ------------------CCTTG---------GCTTTGA------------ACCAAGCC-----------------AAACGCCTCTTCAAATGCAGAT---------------------GGACAGTGTT-------------------------------------------------------------------------TTCTAATTTACACAGGACTTGTG-CCTTACCTCACTTACTCAAAT-AAATAATA---------------------AT--AACACTTAAA---------TTTTTTACATTACATGCACATGTGTCTC--AAAAGACTTATCAATAGAATTTATATTAATTGTATTTGTTTTAAATATTTCTGGGAAAGCATTCCTTGGGAACAGTT-TTAGTTTCATGTATTGTTAAAGAAGAAAT-GGAGTGCG- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8778890 259 + 9889416 ------------------ACTTG---------GCTTTGA------------ACCAAGCC-----------------AAATGCCTCTGCAAATGCAGAT---------------------GGACAGTGTT-------------------------------------------------------------------------TTCTAATTTACACAGGACTTGTA-CCTTACCTCACTTACTCAAAT-AAGTAATA---------------------AT--AACACTTAAA---------TTTTTTACATTACATGCACATGTTTCTC--AAAAAACTTATCAATAGAATTTATATTAATTGTATTTGTTTTAAATATTTCTGGGAAAGCATTCCTTGGGAACAGTT-TTAGTTTCATTTATTATCAAAGAAGAAATAAGAGTGCA- i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19230596 253 + 47401472 ------------------CTTTG---------ACATTGA------------ACCAAGCT-----------------AAATTTCTCTTCAAATGCAGAT---------------------GTATATTGTT-------------------------------------------------------------------------CTCTAATTTACACAGGGCTTGCA-CCCTACCTCATTTACTCAAGTGAAAAAATA--------------------------A----TAAA---------TTCCCTGCAAT-TATGTACGTGTTTCTCAAAAATACATTATCTATTGAATTTACATTAATTTTATTTATTTTAAATATTTCTGGGAAAGCATTCCTAGGGAACACTG-TTAGTTTCATTTGTTGTCAAAAAGGAAAT-GGGGTGGG- i micMur3.chr31 C 0 I 124 s otoGar3.GL873528 20781876 247 - 38779656 ------------------CTTTG---------ACATTGA------------GTCAGGCC------------------AATTTCTCTTCAAATGCAGAT---------------------GGATACTGTT-------------------------------------------------------------------------TCCTACTTTACACGGAGCTTGTA-CCCTACCTCAATTACTCAACTGAAAAAATA--------------------------A----TAAA---------TTCCCTACAATGTATGCGTATGTTTCTCAAAAATACATTATCTATTGAATTCACATTAATTGTA-----CATAAGTATTTCAGAAAAACCACTCCGAGAAAACGCTT-TTAGTTTTATTTGTAGTCAAAAAGAAAGT-GGGGAGG-- i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78154112 399 + 98207768 ------------------CCCTGCCCCCCTTAGCTTCAAGGCCTCCAGATGACCAAATCTATCTACTTCTGCATGAAAATGTATTTACAATTTCTGATTTCAGTAATAAAACAGCTTTGGAGCAAAGTCATAAGTGGGTTTATGACTTAGGATGGCCTCCTCCTATAATTTTGACATTGAAAAGCCATAAGATAAGCAGCAATTTTAATCTATTCACGACTTGTA-ACCTACCTCAGTTAATCAAGG-AAAAGAAA---------------------AGTAAACATTCCAATATTAACTGTTTGCTGTAATATATGGATATTCCTACC---CCAGAATTGTCTGTTGAGTTCACATTAATTCTATTTGTTTGAAATGTTCCTGTAAAAGCAGTCTTAGAGTATAGGT-CTGGCTTCACTCATCAAAAAAAAAAAAA--AAAGTGAT- i mm10.chr16 C 0 C 0 s canFam3.chr31 13855900 264 + 39895921 ------------------CCTTG---------ACATTGA------------ACCAAGCC-----------------AAATTTCTCCTCAAATGCAGAT---------------------GGCTAGTGTT-------------------------------------------------------------------------TTCTAATTTACATGTGTTTTGTACCCTTATCTCATTCATTCAAGC-AAA-AATATAGATGCGTATGTATGTATGTAT---ATAC-CATA---------TTGACTCTAATACACGCTCATGTTTCCC-AAAAAGCATTATGTATAGATTTCACATCAGTTGTGTT---------TATTTCTCGGAAAGCATGCTGAGGGGACATT--CTAGGCTCATTTCTTGTCAAATA-GAAAT-ATGGt---- i canFam3.chr31 I 138 C 0 s dasNov3.JH568778 3700695 272 - 6883506 GTTGGTCTCTTAATGTAAGTCTG---------ACAATGA------------GTCAAGCC-----------------AAATTTCTCTTCCAAGCCAGTT---------------------GGGTAATGTT-------------------------------------------------------------------------CTCTACTTTACACAGAGACTGTT-CCCTACTTCATTTACGCAAGT-AGAAGAAT--------------------------ACAAATTAA---------TTTACAGCAATGCATGCACATTTTTCTC-AAAGAACATTCTGTATAGAATAAATATTAATTGCATTTATCTTAACTATATCTGAGAAAGCATTCCTGGGGAATACTT-CTAGTTTCATTTACT---AAGTAGAAAAT-GAGGCCATT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M a score=1442390.000000 s hg38.chr21_KI270874v1_alt 124438 122 + 166743 GCCTTTTATT---------------------------------TTTTG--TGTGTGTTAAATATAGAGTATTAATTGGTATAAATATTCCGGGTAGAAT--------TTCTAAATAAATTCAAAACATGCTTTG----TTTTTAGAAAAGA-----------TACATATTAATGCCCTAA s panTro5.chr21 3750056 122 + 33445071 GCCTTTTATT---------------------------------TTTTG--TGTGTGTTAAATATAGAGTATTAATTGGTCTAAATATTCTGGGTAGAGT--------TTCTAAATAAATTCAAAACATGCTTTG----TTTTTAGAAAAGA-----------TACATATTAATGCCCTAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17375857 122 + 46275980 GCCTTTTATT---------------------------------TTTTG--TGTGTGTTAAATATAGAGTATTAATTGGTCTAAATATTCTGGGTAGAGT--------TTCTAAATAAATTCAAAACATGCTTTG----TTTTTAGAAAAGA-----------TACATATTAATGCCCTAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3315281 122 - 13858734 GCCTTTTATT---------------------------------TTTTG--TGTGTGTTAAATATAGAGTATTAATTGGTCTAAATATTCCGGGTAGAGT--------TTCTAAATAAATTCAAAACATGCTTTG----TTTTTAGAAAAGA-----------TACATATTAATGCCCTAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4498318 122 + 32716333 GCCTTTTATT---------------------------------TTGTG--TGTGTGTTAAATATAGAGTATTAATTGGTCTAAATATTCCGGGTAGAAT--------TTCTAAATAAATTCAAAATATGTTTTC----TTTTTAGAAAAGA-----------TACATATTAATGGCCTAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155453796 132 - 185818997 GCCTTTTAAT---------------------------------TTTTGCGTGTGTGTTAAATACAGAGTATTAATTGGTTTAAATATTCCAGGTTGAATTTCCACACTTCTAGATAAATTCTAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTAATGCCCTAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162278076 132 - 192294377 GCCTTTTAAT---------------------------------TTTTGCGTGTGTGTTAAATACAGAGTATTAATTGGTCTAAATATTCCAGGTTGAATTTCCACACTTCTAGATCAATTCTAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTAATGCCCTAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8759093 132 + 9440265 GCCTTTTAAT---------------------------------TTTTGCGTGTGTGTTAAATACAGAGCATTAATTGGTCTAAATATTCCAGGTTGAATTTCCACACTTCTAGATAAATTCTAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTAATGCCCTAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8487969 132 + 21915920 GCCTTTTAAT---------------------------------TTTTGCGTGTGTGTTAAATACAGAGTATTAATTGGTCTAAATATTCCAGGTTGAATTTCCACACTTCTGGATAAATTCTAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTAATGCCCTAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15062762 132 - 90373283 GCCTTTTAAT---------------------------------TTTTGCGTGTGTGTTAAATACAGAGTATTAATTGGTCTAAATATTCCAGGTAGAATTTCCACACTTCTAGATAAATTCTAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTAATGCCCTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2248167 132 + 4234846 GCCTTTTAAT---------------------------------TTTTGCGTGTGTGTTAAATACAGAGTATTAATTGGTCTAAATATTCCAGGTTGAATTTCCACACTTCTAGATAAATTCTAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTAATGCCCTAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 246290 132 - 13750039 GTCTTTTATT---------------------------------TTTTGCATGTGTGTTAAATATAGAGTATTAATTGGTCTAAATATTCCAGGTAGAATTTCCACACTTCTAGATAAATTCTAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTAATGCCTTAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21970249 131 + 50472720 GCCTTTTATT--------------------------------TTTGTGTGTGTGTATTAAATATAGAGTATTAATTGGTCTAAATACTCTGGATAGAATTTCCAC--TTCTAATTAAATTCCAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTGATGCCCTAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5064389 163 + 13128814 GCCTTTTATTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATTAAATATAGAGTATTAATTGGTCTAAATACTCTGGATAGAATTTCCAC--TTCTAATTAAATTCCAAACATGCTTTG----TTTTTAGAAAAGA-----------CACAGATTGATGCCCTAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9640810 131 - 14377064 GCCTTTTATT--------------------------------TTTGTGTGTGTGTATTAAATATAGAGTATTAATTGGTCTAAATACTCTGGATAGAATTTCCAC--TTCTAATTAAATTCCAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTGATGCCCTAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8779149 135 + 9889416 GTCTTTTATT----------------------------tgtgtgtgtgtgtgtgtATTAAATATAGAGTATTAATTGGTCTAAATACTCTGGATAGAATTTCTAC--TTCTAATTAAATTCCAAACATGCTTTG----TTTTTAGAAAAGA-----------CACATATTGATGCCctaa i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20782123 123 - 38779656 ATCTTTCTTT------------------------------------------CATTTTAAACAGAAACCATTAATTGGTCTAAATA-TCTTGGTAGAGTTTCCATATTTCTAATTAAATTCCAGAAGGGATTCG---CTTTTTAGAAAAAA-----------TGCTTCCTAATGCCCTAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78154511 160 + 98207768 ACATTTTTTT--------------------CTTCTCTTCTTTATTTTTCATATTAAATAAATATTGAGCATCAACTGGTCTAAATATTTCTTGAAGAACTTCTATACTTCTAATTAAACCCCAAACATGCTTTTTCTCTTTTTAGATAAAAAAGGAAACCCTCATTTATTAATGCCCTGC i mm10.chr16 C 0 C 0 s canFam3.chr31 13856164 128 + 39895921 -aatttaaat---------------------------------ttttt----tatattaaatGTAGGGCATTAATTGGTCTAAATATTCCTGGCAGAGTTTCTGCACCTCTAATTAAATTCCAAATGGGCCTCA---CTTCCCAGAAAACA-----------CACGTATTAATGCCCTAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3700967 128 - 6883506 TCCTTTTAAT---------------------------------TTTTTCATATT-----AATATAGAGCATTAATTGGCCTAAAGATTCCTGATGGATTTTCCATAATTCTAATTAACTTCCTAACATCCCTCA---CTTCTTTGATAATA-----------CACATACTAATGCCCAAA i dasNov3.JH568778 C 0 I 460 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M e micMur3.chr31 19230849 124 + 47401472 I a score=112768.000000 s hg38.chr21_KI270874v1_alt 124560 10 + 166743 ACCTAAACTA s panTro5.chr21 3750178 10 + 33445071 ACCTAAACTA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17375979 10 + 46275980 ACCTAAACTA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3315403 10 - 13858734 ACCTAAACTA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4498440 10 + 32716333 ACCTAAACTA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155453928 10 - 185818997 ACCTAAACTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162278208 10 - 192294377 ACCTAAACTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8759225 10 + 9440265 ACCTAAACTA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8488101 10 + 21915920 ACCTAAACTA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15062894 10 - 90373283 ACCTAAATTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2248299 10 + 4234846 ACCTAAACTA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 246422 9 - 13750039 ACC-AAACTA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21970380 10 + 50472720 ATCTAAACTA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5064552 10 + 13128814 ATCTAAACTA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9640941 10 - 14377064 ATCTAAACTA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8779284 10 + 9889416 atctaaacta i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20782246 10 - 38779656 ATTTAAATTA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78154671 10 + 98207768 ATCTAAACTT i mm10.chr16 C 0 C 0 s canFam3.chr31 13856292 4 + 39895921 ATCT------ i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3701555 10 - 6883506 acctaaaaaa i dasNov3.JH568778 I 460 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M e micMur3.chr31 19230849 124 + 47401472 I a score=529684.000000 s hg38.chr21_KI270874v1_alt 124570 37 + 166743 AAACTAAACCAGATGAAATGCTGTGTCTTAACGCAAG s panTro5.chr21 3750188 37 + 33445071 AAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17375989 37 + 46275980 AAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3315413 37 - 13858734 AAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4498450 37 + 32716333 AAACTAAACCAGATGAAATCCTGTATCTTAATGCAAG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155453938 37 - 185818997 AAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162278218 37 - 192294377 AAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8759235 37 + 9440265 AAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8488111 37 + 21915920 AAACTAAACCAGATGAAATGCTGTGTCTTAATGTAAG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15062904 37 - 90373283 AAACTAAACCAGACGAAATGCTGTGTCTTAATGCAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2248309 37 + 4234846 AAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 246431 37 - 13750039 AAACTAAACCAGATGAAATGCTGTGTCTTAATGCAAG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21970390 37 + 50472720 AAATTAAACCAGATAAAATGCTGTGTCTTAAAGTAAG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5064562 37 + 13128814 AAACTAAATCAGATAAAACGCTGTGTCTTAAAGCAAG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9640951 37 - 14377064 AAACGAAACCAGATAAAATGCTGTGTCTTAAAGCAAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8779294 37 + 9889416 aaactaaaccagataaaATGCTGTGTCTTAAAGCAAG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19230973 37 + 47401472 AAATTAAAACAAATGAAATGCTGTGTCTTAATGGAAG i micMur3.chr31 I 124 C 0 s otoGar3.GL873528 20782256 31 - 38779656 ------AAACAGATGAAATGCTGTGTCTTAAGTTAAG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78154681 31 + 98207768 ------AGCCAGAAGAAATGCGGCACCGTAAGGCAAG i mm10.chr16 C 0 C 0 s canFam3.chr31 13856296 35 + 39895921 AAACTAAACCAGATGAAATGCTGCATCTTAA--CAAG i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3701565 26 - 6883506 aaaAAAAACTATATGAAA-----------AGTAAAAG i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1125556 1361 + 2694913 M a score=3749989.000000 s hg38.chr21_KI270874v1_alt 124607 247 + 166743 TCAGGCACCATTTACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGTTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCTGAAGATTTTTATTTTCTCATTTATATCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTCCTGCATGATTACAATTTTCTCTTATTAGCTTTTAGCTG-TGTGTGATATTCAACATCCATTCCTCTTTGTTTTTAGAAAGTACTTTT s panTro5.chr21 3750225 247 + 33445071 TCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGTTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCTGAAGATTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTCCTGCATGATTACAATTTTCTCTCATTAGGTTTTAGCTG-TGTGTGATATTCAACATCCATTCCTCTTTGTTTTTAGAAAGTACTTTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17376026 247 + 46275980 TCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGTTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCTGAAGATTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTCCTGCATGATTACAATTTTCTCTCATTAGGTTTTAGCTG-TGTGTGATATTCAACATCCATTCCTCTTTGTTTTTAGAAAGTACTTTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3315450 247 - 13858734 TCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGTTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCTGAAGATTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTCCTGCATGATTACAATTTTCTCTTATTAGCTTTTAGCTG-TGTGTGATATTCAACATCAATTCCTCTTTGTTTTTAGAAAGTACTTTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4498487 247 + 32716333 TCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAATCTACCTTCAAGTTGCACAGTGCTTTCCATTCAGCAGGAATGGCTGCTGTTCTAAATGCCGAAGATTTTTATTTTGTCATTTGTGTCCTTTTAACAAGTAATTAATGGGTTTAAATACCTTTCTGCATGATTACAGTCTTCTCTTATTAGCTTTTAGCTG-TGTGTGATATTCAACATCCATTCCTCTTTGTTTTTAGAGAGTGCTTTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155453975 247 - 185818997 TCAGGCACCATTGACTTGTCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTGTTTAAATACCTTCCTGCATGATTACATTTTTCTCGTATTAGCTTTTAGCTG-TGTGTGATATTCAACATTGATTCCTCTTTGTCTTTAGAAAGTACTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162278255 247 - 192294377 TCAGGCACCATTGACTTGTCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTGTGTAAATACCTTCCTGCATGATTACATTTTTCTCGTATTAGCTTTTAGCTG-TGTGTGATATTCAACATTGATTCCTCTTTGTCTTTAGAAAGTACTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8759272 245 + 9440265 TCAGGCACCATTGACTTGTCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTGTTTAAATACCTTCCTGCATGATTACATTTTTCTCGTATTAGCTTTTAGCTG-TGTGTGATATTCAACATTGATTCCTC--TGTCTTTAGAAAGTACTTTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8488148 247 + 21915920 TCAGGCACCATTGACTTGTCTCCCAAAGTTTCCAGTTAGTCAACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGACTTTTACTTTGTCATTTGTATCCTTTTAACAGGTAATTAATGTGTTTAAATACCTTCCTGCATGATTACAGTTTTCTCGTATTAGCTTTTAGCTG-TGTGTGATATTCAACATTGATTCCTCTTTGTCTTTAGAAAGTACTTTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15062941 247 - 90373283 TCAGGCACCATTGACTTGCCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTGTTTAAATACCTTCCTGCATGATTACAGTTTTCTCATATTAGCTTTTAGCTG-TGTGTGATATTCAACATTGATTCCTCTTTGTCTTTAGAAAGTACTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2248346 247 + 4234846 TCAGGCACCATTGACTTGTCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTTCATTCAGCAGAAATGGCTGCTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTGTTTAAATACCTTCCTGCATGATTACAGTTTTCTCGTATTAGCTTTTAGCTG-TGTGTGATATTCAACATTGATTCCTCTTTGTCTTTAGAAAGTACTTTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 246468 247 - 13750039 TCAGGCACCACTGACTTGCCTCCCAAAGTTTCCAGTCAGTCTACCTTCCAGTTGCACAGTGCTTTCCATTCAGCAGGAATGACTGCTGTTCTAAATGCTGAAGACTTTTATTTTGTCATTTGTATCCTTTTAACAAGTAATTAATGTATTTAAATACCTTCCTGCATGATTACAATTTTCTCATATTATCTTTTAGCTG-TGTGTGATATTCAACATTGATTTCTCTTTGTCTTAAGAAAGTACTTTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21970427 243 + 50472720 TCAGGCACCGTTGACTTGCCTCCCAAAATATC----CAATCTACCTTCAAGTTGCATAGTGCTTTCCATTCAGCAGGAATGGCTGCTATTCTAAATGCTGAAGATTTCTATTTTATTATTGGTATCCTTTAAAAAAGTAATTAGTGTGTTTAAGTACCTTCCCACATGATTACAATTTTCTCTTATTAGCTTTTAGCTG-TGTGTGATATTCAACATTCATTCCTCTTTGTCTTTAGAAAGTACTTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5064599 246 + 13128814 TCAGGCACCATTGACTTGCCTCCCAAAATTTCTAGTCAATCTACCTTCAAGTTGCATAGTGCTATTTATTCAGCAGGAATGGCTGCTATTCTAAATGCTGAAGATTTCTATTTTGTTATTTGTATCCTTT-TAAAAGTATTTAGTGTGTCTAAATACCTTCCTGCCTGATTACAATTTTCTCTTATTAGGTTTTAGCTG-TGTGTGATATTCAACATTCATTTCTCTTTGTCTTTAGAAAGTACTTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9640988 247 - 14377064 TCAGGTGCCATTGACTTGCCTCCCAAAATTTTCAGTCAATCTACCTTCAAGTTGCATGGTGCTTTCCGTTCAGCAGGAATGGCTGCTATTCTAAATGCTGAAGATTTCTATTTTGTTATTTGTATCCTTTTAAAAAGTAATTAGTGTGTTTAAATATCTTCCTGCATGATTACAATTTTCTCTTACTAGCTTTTAGCTG-TGTGTGATATTCAACATTCATTCCTCTTTGTCTTTAGAAAGTACTTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8779331 247 + 9889416 TCAAGCGCCATTGACTTGCCTCCCAAAATTTCCAGTCAATCTACCTTCAAGTTGCATAGTGCTTTCCATTCAGCAGGAATGGCTGCTATTCTGAATGCTGGAGATTTCTATTTTGTTATTTGTATCCTTTTAAAAACTACTTAATGTGTTTAAATACCTTCCTGCATGATTACAGTTTTCTCTTATTAGCTTTTAGCTG-TGTGTGATATTCAACATTCATTCCTCTTTGTCTTTAGAAAGTACTTTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19231010 246 + 47401472 TCAAGCACCATTGACATGCCTTCCTCAATTTCCAGTCAACCAGCCTTCAGGTTGCATATTA-TCTCAGTTCAGCAGGGGTAGCTGTGGTTCTAAATGCTAAAGATTTTCATTTTGCCCTTTGTATCATTTTAACAATTTATTAGTGTGTTTAGATATCTTCCTACATGAACTTAATTTTCTCTCATTAGCTTTTAGCTC-TGTATGCTATTAAATGTTCATTCCTTTCTGTCTTTAGAAAGTACTTTT i micMur3.chr31 C 0 I 227 s proCoq1.NW_012144079v1 1126918 246 + 2694913 TCAAGCACCATTGACATGCCTTCCTAAATTTCCAGTCAACCCACCTTCAGGTTGCATATTA-TGTCAATTCAGCAGGGATATCTGTGATTCTAAATGCTAAAGATTTTCATTTTGTCCTTTGTGTCATTTTAACAATTTATTAGTGTGTTTAGATATCTTCCTACATGATCTTAATTTTCTCTCATTAGCTTTTAGCTC-TGTATGCTATTAAATGTTCATTCCTCTCTGTCTTTAGAAAGTACTTTT i proCoq1.NW_012144079v1 M 1361 C 0 s otoGar3.GL873528 20782287 246 - 38779656 CCAAGCACTACTGACATGCCTCCCTAAAGGTCCAGTCAATTCACCTTCACGTGGCATCTCA-CTGCCATTCAGCAGGAGTGGCTGCCGTTCTACATGCCAAAGATTTTCATTGTGTCCTTCATACAATTTTAACAACATATTGATGTGTTTCGATACCTTCC-ACATGATCTTAATTTTCTCTCATTAGCTTTCAGCTCTTGTACGCTACGAAACATTCGTTCCTCTTCATCTTTAGAAAGTACTTTT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78154712 214 + 98207768 TTAAACACATCTGAACTCCCCTC---------------AGCTGCCCGCAGCTTGACCTGTGTTTCCTACTCACCAATCCTG-CTGCTCTTCTCAGGGCCAAGGATGTTCCGTTT--CCTTTGTATCCCTTTCAGAAGTAATTGGTGTGTTCAAA-ACTTTTCCACATGACTCAGACTTTCTCCCCTTTGCTTTCAACTC-CATGCGATAGTCAACATTCACTC---------TGTAGAACGTC----- i mm10.chr16 C 0 C 0 s canFam3.chr31 13856331 245 + 39895921 TCAAGCACCACTGACATGCCTTCCTAAATTTTGAGCCAATCCACCCTCAGGCTGTGCAGCGCTTTCCATTCAACAGCAGTTGCTGCTATTCTACATGCTGAAGATTTTCATTTTGCCCTTTGTATCATTTTAACAAGTAATTAGTGTATTCGGATACCTTTCTGCATGATCTTAATTTTCTCTCATTAGCTTTTGACTC---TGTGGTATTCAAAGTTCATTCCTCTTTGTTTTTAGAAAGTATTTTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3701591 235 - 6883506 TCAAGCACCATTGACATGCCTTCCCAAATTGTAAGTCAATCTACCCTCAGGCTGTAAAATGTTTTCCGTTC------CATAGTTGTCATTCTAAATGCTGAATGTTTC--ATTTGTC-TTTGTATCATTTCAACAGTTAATTAGTTTGCTGAGATAACTTTCTGCAGGATCCTAAAGTTCTCTCATCAGCTTTTAGTTC---TGTAGTATTCAACGTTCACTCCTCTTTGTTTTTAGAAAGTGTTTT- i dasNov3.JH568778 C 0 C 0 a score=370516.000000 s hg38.chr21_KI270874v1_alt 124854 29 + 166743 TAAAAATCTGAAGTTTAAACACAGGGTAT s panTro5.chr21 3750472 29 + 33445071 TAAAAATCTGAAGTTTAAACACAGGGTAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17376273 29 + 46275980 TTAAAATCTGAAGTTTAAACACAGGGTAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3315697 29 - 13858734 TAAAAATCTGAAGTTTAAACACAGAGTAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4498734 29 + 32716333 TAAAAATCTGAAGTTTAAACACAGGGTAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155454222 29 - 185818997 TAAAAATCTGAAGTTTAAACATAGGGTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162278502 29 - 192294377 TAAAAATCTGAAGTTTAAACATAGGGTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8759517 29 + 9440265 TAAAAATCTGAAGTTTAAACATAGGGTAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8488395 29 + 21915920 TAAAAATCTGAAGCTTAAACATAGGGTAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15063188 29 - 90373283 TAAAAATCTGAAGTTTAAACATAGGGTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2248593 29 + 4234846 TAAAAATCTGAAGTTTAAACATAGGTTAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 246715 29 - 13750039 TAAAAATCTGAAGTTTAAACATAGGGTAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21970670 29 + 50472720 TAAAAATCTGAAGTTTAAACATAGGGTAT i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 5064845 29 + 13128814 TAAAAATCTGAAGTTTAAACATAGGGTAT i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 9641235 29 - 14377064 TAAAAATTTGAAGTTTAAACATAGGGTAT i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 8779578 29 + 9889416 TAAAAATCTGAAGTTAAAACATAGGGTAT i aotNan1.NW_018487195v1 C 0 I 1 s proCoq1.NW_012144079v1 1127164 27 + 2694913 AAACAACTTGAAGTT--AACATAGGGCAT i proCoq1.NW_012144079v1 C 0 I 1 s otoGar3.GL873528 20782533 26 - 38779656 AAACAACTTGAAGCT--AACATA-AGCAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78154926 25 + 98207768 ----AACCCAGAGTTCATACCAGGTGTAC i mm10.chr16 C 0 C 0 s canFam3.chr31 13856576 27 + 39895921 AAACAACTTGAAGTT-AAACTCA-GGCAT i canFam3.chr31 C 0 I 1 s dasNov3.JH568778 3701826 27 - 6883506 TAAAAACTTCAAGTT--AACATAGGACAT i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19231256 227 + 47401472 I a score=8808656.000000 s hg38.chr21_KI270874v1_alt 124883 573 + 166743 AAAATTTCTATTTGTTTTATATTTCCATAACATCAAATAATAATCTCTCTAAACTTATATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTGGATCAA--CAAAATGGG-TTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATAA----TAATCGCCATTCTTTAGCAGGC-AAAAATT---ATGGATACAGTAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTCTACTGTCCTAAATTGTCTCCCAGTCACACTACTG----TTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGACGTCATTTCACATTTG-TCAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-CATTACTATTACTTTGAAAATTTATCAAAACAAAAGGAGTTGTATCGTAG-----------------CC-AAAAAGACTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AAGATAATATTTTATAATAACAT s panTro5.chr21 3750501 573 + 33445071 AAAATTTCTATTTGTTTTATATTTCCATAACATCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAGATCAA--CAAAATGGG-TTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATGA----TAATCGCCATTCTTTAGCAGGC-AAAAATT---ATGGATACAGTAGTTACAATAAATGAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTCTACTGTCCTAAATTGTCTCCCAGTCACACTACTG----TTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-CATTACTATTACTTTGAAAATTTATCAAAACAAAAGGAGTTGTATCGTAG-----------------CC-AAAAAGACTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AAGATAATATTTTATAATAACAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17376302 573 + 46275980 AAAATTTCTATTTGTTTTATATTTCCATAACATCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAGATCAA--CAAAATGGG-TTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATGA----TAATCACCATTCTTTAGCAGGC-AAAAATT---ATGGATACAGTAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATGTTCCCGGTTAAGAGTGTAAAAACTCTACTGTCCTAAATTGTCTCCCAGTCACACTACTG----TTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-CATTACTATTACTTTGAAAATTTATCAAAACAAAAGGAGTTGTATCGTAG-----------------CC-AAAAAGACTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AATATAATATTTTATAATAACAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3315726 572 - 13858734 AAAATTTCTATTTGTTTTATATTTCCA-AACATCAAATAATAATCTCTCTAAACTTGCATTT-TGAAATACAAA--GTACT----TCCTTCTTCCTCTAGATCAA--CAAAATGGG-TTCAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATGA----TAATCGCCATTCTTTAGCAGGC-AAAAATT---ATGGATACGGTAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTCTACTGCCCTAAATTGTCTCCCAGTCACACTACTG----TTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGACGTCATTTCACATTTG-TCAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACGTGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CACATATA---TGGAAATTCACTTACTTGATTATGCATTTT-CATTACTATTACTTTGAAAATTTATCAAAACAAAAGGAGTTGTATCAGAG-----------------CC-AAAAAGACTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AAGATAATATTTTATAATAACAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4498763 574 + 32716333 AAAATTTCTATTTGTTTTATATTTCCATAACATCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTGCTTCCTCTAGATCAA--CAAAATGGG-TTTAATTAATCTTATGTCCTTATTTAAGGTTTTAGGAAATGA----TAATCATCATTCTTTAGCAGGC-TAAAATT---ATGGATACAATAATTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTTTACTGTCCTAAATTGCCTCCTAGTTACACTACCG----TTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGACGTCATTTCACATTTG-TCAACTCACTAATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-CATTACTACTACTTTGAAAATTTATCAAAACAAAAGGAGTTGTATCGTAG-----------------CCAAAAAAGACTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AAGATAATATTTTATAATAACAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155454251 577 - 185818997 AAAATTTCTATTTGTTTTATAGTTCTATAACGTCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAAATCAA--CAAAATGGG-TTTAATTAATCTTATGCTGTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCTGGTTAGGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCTAATTACACGA-TG----CTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-AATTACCATTATTTTGAAAATATATCAAAACAAAAGGAGTTGTATCATAG-----------------CC-AAAAAGATTTTT--TAAA---TGTAAAATTTGGTC----TAAGT----AAGATAATGTTTTATAATAACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162278531 577 - 192294377 AAAATTTCTATTTGTTTTATAGTTCTATAACGTCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAAATCAA--CAAAATGGG-TTTAATTAATCTTATGCTGTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCTGGTTAGGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCTAATTACACGA-TG----CTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTAACATTTG-TCAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-AATTACTATTATTTTGAAAATATATCAAAACAAAAGGAGTTGTATCATAG-----------------CC-AAAAAGATTTTT--TAAA---TGTAAAATTTGGTC----TAAGT----AAGATAATGTTTTATAATAACAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8759546 577 + 9440265 AAAATTTCTATTTGTTTTATAGTTCTATAACGTCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAAATCAA--CAAAATGGG-TTTAATTAATCTTATGCTGTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCTGGTTAGGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCTAATTACACGA-TG----CTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-AATTACTATTATTTTGAAAATATATCAAAACAAAAGGAGTTGTATCATAG-----------------CC-AAAAAGATTTTT--TAAA---TGTAAAATTTGGTC----TAAGT----AAGATAATGTTTTATAATAACAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8488424 573 + 21915920 AAAATTTCTATTTGTTTTATAGTTCTATAATGTCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAAATCAA--CAAAATGGG-TTTAATTAATCTTATGCTCTTATTTAAGGTTTTAGGA---AATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATCTCACAAATGGAAAAATTTTCCTGGTTAGGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCTAATTACACGACTG----CTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTTC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-AATTACTATTATTTTGAAAATGTATCAAAACAAAAGGAGTTGTATCATAG-----------------AC-AAAAAGATTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AAGATAATGTTTTATAATAAC-- i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15063217 578 - 90373283 AAAATTTCTATTTGTTTTATAGTTATATAACTTCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAGATCAA--CAAAATGGG-TTTAATTAATCTTATGCTCTTATTTAAGGTTTTAGGAAATAATAATTAATCAGCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAACGATCTCACAAGTGAAAAATTTTTCCCGGTTAAGAGTGTAAAAACTTTAGTGTCCTAAATTGTCTCCTAATTACACGACTG----CTACTTAAACAACGT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAATATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-AATTACTATTATTTTGCAAATGTATCAAAACAAAAGGAGTTGTATCATAG-----------------CC-AAAAAGATTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AAGATAATGTTTTATAATAACAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2248622 578 + 4234846 AAAATTTCTATTTGTTTTATAGTTCTATAATGTCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAAATCAA--CAAAATGGG-TTTAATTAATCTTATGCTGTTACTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCTGGTTAGGAGTGTAAAAACTTTACTGTCCTAAATTGTCTCCTAATTACACGACTG----CTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTT-AATTACTATTATTTTGAAAATGTATCAAAACAAAAGGAGTTGTATCATAG-----------------TC-AAAAAGATTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AAGATAATGTTTTATAATAACAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 246744 579 - 13750039 AAAATTTCTATTTGTTTTATAGTTCTATAACATCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--ATACT----TCCTTCTTCCTCTAGATCAA--CAAAATGGG-TTTAATTAATCTTATGCTCTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGACAAAAAATT---ATGGATACAACAGTTACAATAAATTAACTCAAATGATCTCACAAATGAAAAAATTTTCCCGGTTAAGAGTGTAAAAACTTCACTGTCCTAAATTGTGTCCTAATTACGCGACTG----CTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTGATTTAATAACCACATGAAAAGGCAATAGAATTATAAAACATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATGTATA---TGAAAATTCACTTACTTGATTATGCATTTTAAATTACTATTATTTTGAAAATGTATCAAAACAAAAGGAGCTGTATCATAG-----------------CC-AAAAAGATTTTT--TAAA---TATAAAATTTGGTC----TAAGT----AAGATAATGTTTTATAATAACAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21970700 573 + 50472720 AAGATTTCTATTTGTTTTATATTTCTATTACATCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--GTACT----TTCTTCTTCCTCGAGATCTA--CAAAATGGA-TTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGTGGGC-AATAATT---ATGGATACAATTGTTACAATAAATTAACTCAAATTATCTCATAAATGAAAAGATATTCCCAGTTAAGAGTACAAAGACTTTACTGTCCTAAATCATCTCCTAATTACTCTATTG----TTACTCAAACAATAT-ATCTCAGTTAAAG--------TACAGATGTCATTTCACAGTTG-TCAACTCACTAACTTAATAACCACATGAAAATGCAATAGAATTTTAAAACATGTTAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATATATA---TG----AAGATTTACTTGATGATGCATTTT-AATTACTATTATTTTGAAAATTTATCGAAACAAAAGGAGTCATATCATAG-----------------CC-aaaaatattttt--aaaa---tataaaatttGGTC----TGAGT----AAGAAAAAATTTTATGATAATAT i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 5064875 568 + 13128814 AAGAGTTCTATTTGTTTTATATTTCTATTACATCAAATAATAATCTCTCTAAACTTGTGTTT-TGAAATACAAA--GTACT----TCCTTCTTCCTCGAGATCTA--CAAAACGGA-TTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGGC-AATAATT---ATGGATACAATTGTTACAATAAATTAACTCAAATTATCTCACAAATGAAAAGATATTCCTAGTTAAGGGTGCAAAAACTTTACTGTCCTAAGTCGTCTCTTAATTACTCTACTG----TTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-TCAACTCACTAACTTAATAACCACATGAAAATGCAATAGAATTTTAAAACATGTCAT-TTTTCC--AATACTCCAATGAAATTTTT------------CATATATA---TA----TTCAGTTACTTGACAATGCATTTT-AATTACTATTATTTTGAAAATTTAT-----CAAAAGGAGTCATATCATAG-----------------CC-aaaaatattttt--aaaa---tataaaatttGATC----TGAGT----AAGataatattttataataatat i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 9641265 567 - 14377064 AAGATTTCTATTTGTTTTATATTTCTATTACATCAAATAATAATCTCTCTAAACTTGTATTT-TGAAATACAAA--GTACT----TCCTTCTTCCTCGAGATCTA--CAAAATGGA-TTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGAAATAATAATTAATCACCATTCTTTAGCAGGC-AATAATT---ATGGATACAATTGTTACAATAAATTAACTCAAATTATCTCACAAATGAAAAGATATTCCCAGTTAAGAGTGCAAAAACTTTACTGTCCTAAATCAT-TCCTAATTAC-----TG----TTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTTG-ACAACTCACTAACTTAATAACCACAAGAAAATGCAATAGAATTTTAAACCATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------TATATATA---TGAAGATTCAGTTACTTGATAATGCATTTT-AATTACTATTATTTTGAAAATTTATCAAAACAAAAGGAGTCATATCATAG-----------------CC-AAAAATATTTTT--AAAA---TATAAAATTTGGTC--------T----AAGATAATATTTTATAATAATAT i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 8779608 572 + 9889416 AAGATTTCTATTTGTTTTATATTTCTATTACATCAAATAATAATCTCTCTAAACTT-TATTT-TGAAATACAAA--GTACT----TCCTTCTTCCTGGAGATCTA--CAAAATGGA-TTTAATTAATCTTATGCCCTTATTTAAGGTTTTAGGA---AATAATTAATCACCATTCTTTAGCAGGC-AATAATT---ATGGATACAATTGTTACAATAAATTAACTCAAATTATCTCACAAATGAAAAGATATTCCCACTTAAGAGTGCAAAAACTTTACTGTCCTAAATTGTCTCCTAATTACTCTACTG----TTACTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATTGG-TCAACTCACTAACTTAATAACCACATGAAAAT-CAACAGAATTTTAAACCATGTCAT-TTTTCC--AATACTCTAATGAAATTTTT------------CATATATA---TGAAGATTCACTTACTTGATAATGCATTTT-AATTACTATTATTTTGAAAATTTATCAAAACAAAAGGAGTCATATCATAG-----------------CC-AAAAATATTTTT--TAAA---TATAAAATTTGGTA----TGAGT----AAGGTAATATTTTATAATAATAT i aotNan1.NW_018487195v1 I 1 C 0 s micMur3.chr31 19231483 583 + 47401472 AAAAGTTCTATTTATTTTATTTTTTTATCACATTGAATAATAATTTCTCTAAACTTCTATTT-TGGACTACATGGAATACA----TCCTTCTTCCCCTGTATATA--CAAAGCAGG-TTTAGTGGATTTTATTCCCTCATTTAAGGTTTTAGAAAATAA----TAATCACCATTATTTAGCAGGC-AATAATT---ATGGATGCAATTGTTACAATAAATTAACTCAAATGATCTCACAAATGAAATGGTTTTCTCTGTTAACACTGTAAAAATTTTACTACTCTAAATTTTATCCTGGTTATTCTACTGTTAATTATTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATATGCTCAACTCATTAACTTAATAACCAGATGAGAAAGCAATAGAATGACAAAACATGTCAT-TTTCTC--AATATTCAAATGATATTTTT------------AATATATA---TGAAAATTCACTTACCTGATTATACTCTCT-AATTACTATTATTTTGGAAATTCATAAAAAGAAAAGAAGACTTGCCATAG-----------------CA-AAAAAGATTTTT--TAAACATTATGAAATCTGGTC----TGGGT----AAGACAATATTTTATAATAACTT i micMur3.chr31 I 227 I 90 s proCoq1.NW_012144079v1 1127192 593 + 2694913 AAGAGGTCTATTTGTTTTATATTTGAATCACATTGAGTAATAATTTCTCTAAACTTCTATTTCTGGAATGCATGGAACACATACTTCCTTCCTCCCCTAGATATA--CAAAACAGGTTTTAATGAATTTTATTCCCTTATTTAAGGTTTTAGAAAATAATAATTAATCACCATTATTCAGCAGGC-AATAATT---ATGGATGCAATTGTTACAATAAATTAATTCAAATGATCTCACAAATGAAATGGTTTTCTCAGTTAACACTGTAAAAATTTTACTACCCTAAATTTTCTCCTGGTTATTCTACTGTTAATTATTTAAACAACAT-ATCTCAGTAAAAG--------TACAGATGTCATTTCACATATGCTCAACTCATTAACTTAACAACCAGATGAGAAAGCAATAGAATGACAAAACATGTCAT-TTTCTC--AATATTCAAATGATATTTTT------------CATATATA---TGAAAATTCACTTACCTGATTATGCACTCT-AATTACTATTATTTTGGAAATTCATAAAAAGAAAAAGAGACTTGCCATAG-----------------CA-AAAAAGATTTTT--TAAACATTATGAAATCTGGTC----TGGGT----AAGACAATATTTTATAATAACTT i proCoq1.NW_012144079v1 I 1 C 0 s otoGar3.GL873528 20782559 588 - 38779656 AAGAGTTTTACTTGTTTTATATTTGTATTACACTGAATAATAATTTCTCCAAACTTCTGTTT-TGGAATACATG--CTACT----TCCTTTCTCCTCTAGGTATA--CAAAATGGA-TTTAATGAATTTTATTTCCTTATCTGAGGCTTTAGAAAATACTAATGAATCACCATTATTTAGCAGGC-AATAATT---ATGGATACACTAGGTACAATACATTAACTCAAATGATCTCACAAATGAAAGGGTTTTCTGAGTTAGGACTGTAAAACTTTTACGGCCCTAAATTTTCTCCTGGTTATTCTACTGTTAATTATTTAAACCACATCATCTCAGTAAAAG--------TACAGATGTCATTTCACATATGCTTAACTCATTAACTTAATAATCAAATGAGAAAGCAATAGAACGACAAAACATGTCAT-TTTCTG--AATATTCAGATGAAATTTTT-------------GTACATACTCTGAAAATTCACCTACCTGATTATATACTCT-ACTTACTATTATTTTGAAAATTCATAAAAATAAAAGGAGCCTTACCATAG-----------------CC-GAAAAGACTTCC--TAAACATTATGAAATTTGATC----TGGGT----AAGACAATATTTTATAATAACAT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78154951 564 + 98207768 -GGACTTCTATTTGTTTTATATTTCTATTCCAGTGGATAATAATTCCTCTGGGTTTCTATTT-TGTCAAACAAA--ATATT----TCTTTCCACCTCTGGATGCATTCAAATCAGG-CTTAATGAATCTTACTCCCTCATTTAAGGTTTTAGGAAATAA----------CTATTATTTAGCAAGT-GATAATT---ATGGAGACAATTGCTACAATAAATCATCCTAAATTATTTCACTAACAAAAGGGCTTTCTAGGTTAATAATGTAAAATTTTTACTATACTAAATTGCTTCCTGATTATTCTACTA----CTATTTAAACAACAT-ATATCAGTGAGAC--------CATAGATGCTATTTTATATTTCTCCAACTTGTTAACATAATAATTATATGGGAA---AATAGA-----AATACACGCTAT-TTTTCCTGAATCCTCAAATGAAACTTTC------------TATCTATA-----AAAACAAACTTATCTTATTA--CATACT-CGTTATAATTATCTTAGAAGTTCCTACAAATAAAAGGAGCCTTATTATAG-----------------CC-AAAAAGATTTTTTATAAA---TATGAAATTTGGTC----TCAGTGTA-GAAGGAAAATTTTATAGTGATAT i mm10.chr16 C 0 I 1 s canFam3.chr31 13856604 614 + 39895921 AAGAGTTCTATTTGTTTTATATTT--GTTACATAGAAGAATAATTTCCCTAAGCTTCTATGT-TGGGAAACATA--CTACT----CCTCTCTACCTCTACATGTATTCAAAACGG--CTCAATAAATCTTATTCCTTTACTTAAAGTTTTAGGAAATAGTAATTAATCACCATGATTTAGCAGTT-AATAATTATGATGGAGACAATTATTTCAATAAATCAACACAAAAGATCTCACAAATGAAAGGGATTTCTGAGTTAACATTGTAAAAACTTTATAGAGCTGAATTGTTTCCTGATTATTCTATTA---ATTATTTAAACAATGT-ATCTCAGCTTAAG--------TACAGATGTCATTTTACATGAGCCCAACTCATTAACTTAATAACCAGATGAGAAAGCAGAAGAATGACAAAACATGTCATGTTCCCC--AATAATCAAATGAAATTTTTTAGAAACTCCTCTATATCCA---TAAAAATTTACTTACTTGATTATGCATTCT-----GCCATTATTTTGAAAATTCATCAAAACAAAAGGAGACCTACCATAGTCAAAAAGACTTTTTTTCC-AAAAAGATTTTT--TAAATACTACAAAATTAGGTC----TGGGTACAGAAGGCAATATTTTATAATGACAT i canFam3.chr31 I 1 C 0 s dasNov3.JH568778 3701853 598 - 6883506 AAAAATTCTATTTGTTTTAAATTTGTAATACATTGTGTAATCATATCTCTAAATTTATATTT-TTGGAAACACG--CTCCT----CCTCTCTACTTATAGATAAATTCAAAATGGT-----GTAAATATCATTATCTTGTTTAACGTTTTAGGGAACAATGATTTGGCACCATTATTCAACAGGC-AATAATT---ATGGAGATAATTGTTGCAATAAATCGACTCAAATAATCTCACAAATGAAAGTGGTTTCTGGGTTAACATTGTAAAAACTTTATGGTTCTAAATTCTTTCCTAACTATTCTGTTA---ATTATTTATACAACAT-ATCTCAGTAAAAGTAGAGTAATACAGATATCATTTTACATTTG-TCAACTCATTA----AATAATGAGATAAAAGGGCAGTAGAATTAAAAAACATGTTGT-TTTCCCC-AATATTCAAAAGAAATTATTTAGGAACTCATTTATGTACA---TGAAAATGCACTTGCTTAATTATGCACTTA-AATTGCCATTATTTTG-AAATTCATTGAACCAAAAGGAATCTTACCATAG-----------------CC-AAAAAGATTTTA--AAAT-ACTATAAAATTTGGACTGGGTAAGT----AAGGAAATATTTTATGATGGTGC i dasNov3.JH568778 C 0 C 0 a score=337265.000000 s hg38.chr21_KI270874v1_alt 125456 33 + 166743 GAACTACG----AAACTACAACTA-------TATATATGAAAAA s panTro5.chr21 3751074 33 + 33445071 GAACTACG----AAACTACAACTC-------TATATATGAAAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17376875 33 + 46275980 GAACTACG----AAACTACAACTA-------TATATATGAAAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3316298 33 - 13858734 GAACTACA----AAACTACAACTA-------TATATATGAAAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4499337 33 + 32716333 GAACCATG----AAACTACAGCTA-------TATATATTTAAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155454828 33 - 185818997 AAACTATG----AAACTACAACTA-------CATATACGAAAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162279108 33 - 192294377 AAACTATG----AAACTACAACTA-------CATATACGAAAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8760123 33 + 9440265 AAACTATG----AAACTACAACTA-------CATACACGAAAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8488997 33 + 21915920 AAACTATG----AAACTACAACTA-------CATATATGAAAAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15063795 33 - 90373283 GAACTATG----AAACTACAACTA-------CATATATGAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2249200 33 + 4234846 AAACTATG----AAACTACAACTA-------CATATATGAAAAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 247323 33 - 13750039 GAACTATG----AAACTACAACTA-------CATATATGAAAAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21971273 32 + 50472720 AAACTATG----AAATTACAACTG-------TATGTATGAAAA- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5065443 32 + 13128814 aaaCTATG----AAACTACAACTG-------TATGTATGAAAA- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9641832 32 - 14377064 AAACTATG----AAACTACAACTG-------TATGTATGAAAA- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8780180 32 + 9889416 AAACTATG----AGACTACAACTG-------TATGTATGAAAA- i aotNan1.NW_018487195v1 C 0 C 0 s proCoq1.NW_012144079v1 1127785 25 + 2694913 ------------AAACTACAACCG-------TATCTATTAAAAA i proCoq1.NW_012144079v1 C 0 I 161 s otoGar3.GL873528 20783147 31 - 38779656 TAATTA------CAACTACAACTA-------TCTCTATTAAAAA i otoGar3.GL873528 C 0 I 7 s mm10.chr16 78155516 32 + 98207768 AAGTTAAG----AAAATACAACTG-------TTTCTTTGAAAA- i mm10.chr16 I 1 C 0 s canFam3.chr31 13857218 40 + 39895921 AAACTATG----GAGCTTTAACCGTAGCTTTTATCTATAAAGAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3702451 31 - 6883506 AAACTGTGGAACAAACCATATTTA-------CTTTTTT------ i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19232066 90 + 47401472 I a score=616163.000000 s hg38.chr21_KI270874v1_alt 125489 61 + 166743 ATATTGATTTTGGTAAAAACTTTCCAGCTTGATCC-AAAAAATTTTTTA-TTTTTAAAACAAT s panTro5.chr21 3751107 62 + 33445071 ATATTGATTTTGGTAAAAACTTTCCAGTTTGATCCAAAAAAATATTTTA-TTTTTAAAACAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17376908 61 + 46275980 ATATTGATTTTGGTAAAAACTTTCCAGTTTGATCC-AAAAAATATTTTA-TTTTTAAAACAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3316331 61 - 13858734 ATATTGATTTTGGTAAAAACTTTCCAGTTTAATCC-AAAAATTTTTTTA-TTTTTAAAACACT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4499370 61 + 32716333 ATATTGATTTTGGTAAAAACTTTTCAGTTTAATCC-AAAAAATTTTTTA-TTTTTAAAACAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155454861 61 - 185818997 ATATTGATTTTGGTAAAAACTTTTCAGATTAATCC-AAAAAATTTTTCA-TTTCTAAAACAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162279141 61 - 192294377 ATATTGATTTTGGTAAAAACTTTTCAGATTAATCC-AAAAAATTTTTCA-TTTCTAAAACAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8760156 61 + 9440265 ATATTGATTTTGGTAAAAACTTTTCAGATTAATCC-AAAAAATTTTTCA-TTTCTAAAACAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8489030 61 + 21915920 ATATTGATTTTGGTAAAAACTTTTCAGATTAATCC-AAAAAATTTTTCA-TTTCTAAAACAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15063828 61 - 90373283 ATATTGATTTTGGTAAAAACTTTTCAGATTAATCC-AAAAAATTTTTCA-TTTTTAAAACAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2249233 61 + 4234846 ATATTGATTTTGGTAAAAACTTTTCAGATTAATCC-AAAAAATTTTTCA-TTTCTAAAACATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 247356 61 - 13750039 ATACTGATTTTGGTAAAAACTTTTCAGATTAATCC-CAAAAAATTTTCA-TTTTTAAAACAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21971305 59 + 50472720 ATATTGATTTTGGTAGAAAATTTTCAGTTTAATCC--AGAAATTTTTTA-TTTTGAAAA-AAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5065475 60 + 13128814 ATATTGATTTTGGTAGAAAATTTTCAGTTTAATTC--AGaaatattttattttttaaaa-aat i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9641864 59 - 14377064 ATATTGATTTTGGTAGAAAATTTTCAGTTTAATTC--AGAAATATTTTA-TTTTTAAAA-AAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8780212 59 + 9889416 ATATTGATTTTGGTAGAAAATTTTCAGTTTAATCC--AGAAATTTTTTA-TTTTTAAAA-AAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20783185 62 - 38779656 ATACTCACTTTGGTGGAAAGTTTTCAGTTCAGTCCCTGAAAAATTGCCA-TTTCAGAAACAAT i otoGar3.GL873528 I 7 C 0 s mm10.chr16 78155548 59 + 98207768 ACATCA--CTTAATGGAAAATGTTTAGTTCAGTCT-AATAAAATTGTCA-TTTTAAAGATAAT i mm10.chr16 C 0 I 2 s canFam3.chr31 13857258 45 + 39895921 ATATC-ATTTTGGTGCAAAGCTTTCAGTTCAGTCC-ATAAAAACTAC---------------- i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3702482 57 - 6883506 AAGTCCATTTTAGTGGAATGCTTTCAATTCAGTCC-aaaaaa----tta-tttttaaaataaC i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1127810 161 + 2694913 I e micMur3.chr31 19232066 90 + 47401472 I a score=1202838.000000 s hg38.chr21_KI270874v1_alt 125550 102 + 166743 CTA--TATC----T----AGTTACTTATCAACTGATT---TCCAGTTGTTCAA--CTGACTATAAACTGCTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTAAAAT s panTro5.chr21 3751169 105 + 33445071 CTA--TATC----T----AGTTACTTATCAACTGATTATAGTCAGTTGTTCAA--CTGACTATAAACTGCTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTATCAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17376969 105 + 46275980 CTA--TATC----T----AGTTACTTATCAACTGATTATAGTCAGTTGTTCAA--CTGACTATAAACTGCTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTATCAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3316392 105 - 13858734 CTA--TATC----T----AGTTACTTATCAACTGATTATAGTCAGTTGTTCAA--CTGACTATAAACTGCTTTTTGTTCACAAAAATAAATTATGGTAACAATTTAAG------TACTATCAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4499431 102 + 32716333 CTA--TACC----T----AGTTACTTATCAACTGATT---TTTAGTTGTTCAA--CTGACTATAAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TGTTATCAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155454922 102 - 185818997 CTA--TACC----T----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTGTCAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162279202 102 - 192294377 CTA--TACC----T----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATGTAAG------TACTGTCAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8760217 102 + 9440265 CTA--TACC----T----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTGTCAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8489091 102 + 21915920 CTA--TACC----T----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTGTCAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15063889 102 - 90373283 CTA--TAGC----T----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTACAAAAATAAATTATGGTAACAATTTAAG------TACTGTCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2249294 102 + 4234846 CTA--TACC----T----AGTTACTTATCAACTAATT---TCCAGTTGTTCAA--CTGACTATGAACTACTTTTTGTTTGCAAAAATAAATTATGGTAACAATTTAAG------TACTGTCAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 247417 98 - 13750039 CTA--TACC----T----AGTTACTTATCAACTAATT---TCCAGTTTTTCA------ACTATGAACTACTTTTCGTTTATAAAAATAAATTATGGTAACAATTTAAG------TACTGTCAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21971364 101 + 50472720 CTT--TACC----T----AATTACTTATCAACTGATT---TCCAGTTGTTCAG--CTGACTATAAACCACTTTTT-CTTACAAAAATAAATTATGCAAACAATTTAAG------TGCTAGTGT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5065535 100 + 13128814 CTT--TACC----T----AATTACTTATCAACTGATT---TCCAGTTGTTCAG--CTGACTATAAAACACTTTTT-CTTAC-AAAATTAATTATGTAAACAATTTAAG------TGCTATTGT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9641923 101 - 14377064 CTT--TACC----T----AATTACTTATCAACTGATT---TCCAGTTGTTCAA--CTGACTATAAACCACTTTTT-CTTACAAAAATAAATTATGCAGACAATTTAAG------TGCTATTGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8780271 101 + 9889416 CTT--TACC----T----AATTATTTATCAACTGATT---TCCAGTTGTTCAG--CTGACTATAAACCACTTTTT-CTTACAAAAATAAATTATGCAAACAATTTAAG------TGCTATTGT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19232156 97 + 47401472 CTA--TAAC----T----AGTTAATTATCAGCTGATT---CCTAGCTGTTCAA--TGGAATATAAACTACCTTTTG-CTACACAAATAAATCATGCCAACAATTTAAG------ATTAA---- i micMur3.chr31 I 90 C 0 s otoGar3.GL873528 20783247 106 - 38779656 CTA--TTACTAAGT----AGCTAATTAGCAATTGATT---CCCAGCTGGCCAA--TTGATTATAAACTACTTTTTACCTACACAAATAAATTATGCCAACAATTTAAG------ATTCATTGC i otoGar3.GL873528 C 0 I 6 s mm10.chr16 78155609 87 + 98207768 CTGACTACA----C----ATTTACTTATCAGCTCATT---TCCAGATGTTAAAAGCAGAATGTAAACTATTGTTTGTCCAC---------TTAT-----CACTGTCCA------TAGT----- i mm10.chr16 I 2 C 0 s canFam3.chr31 13857303 112 + 39895921 CTA--TAAC----TGAGCAATTAGTTATCAACTGATT---CCCAGCCGATTAA--CTGAATATAAAGTACTTTTTGCCTATACAAATTAACCTTGCCAACAACTTAAGATTAATTGCTATAGT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3702539 112 - 6883506 CTG--TAAC----TAAGCAGTCATTTATCAATTGATT---CTCAGCTATTTAA--GTGAATGTAATGTATTTTTTGCCTACACAAATAAACCATGGTGACAATCTAAGATTAATTGCTATGGT i dasNov3.JH568778 C 0 C 0 e proCoq1.NW_012144079v1 1127810 161 + 2694913 I a score=3075498.000000 s hg38.chr21_KI270874v1_alt 125652 206 + 166743 ATTTGAGGTTTTTCTTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTGGACAAGCTGCTGAA---GC----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAATCAC--------------------AGTAAAAT s panTro5.chr21 3751274 206 + 33445071 ATTTGAGGTTTTTCTTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTGGACAAGCTGCTGAA---GC----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAATCAC--------------------AGTAAAAT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17377074 206 + 46275980 ATTTGAGGTTTTTCTTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTGGACAAGCTGCTGAA---GC----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAATCAC--------------------AGTAAAAT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3316497 206 - 13858734 ATTTGAGGTTTTTCTTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTGGACAAGCTGCTGAA---GC----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAATCAC--------------------AGTAAAAT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4499533 205 + 32716333 ATTTGAGGTTTTTCTTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTCGACAAGCTGCTGAA---GC----AAT-ATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155455024 202 - 185818997 ATTTGAGGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTCAACAAGCCGCTGAA---GT----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162279304 202 - 192294377 ATTTGAGGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTCAACAAGCCGCTGAA---GT----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8760319 202 + 9440265 ATTTGAGGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTCAACAAGCCGCTGAA---GT----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8489193 202 + 21915920 ATTTGAGGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTCGACAAGCCGCTGAA---GT----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15063991 202 - 90373283 ATTTGAAGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGACCG----TTAATTGCAGTGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTCGACAAGCCGCTGAA---GT----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2249396 201 + 4234846 ATTTGAGGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTCGACAAGCCGCTGAA---GT----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAA-CAC--------------------AGTAAAAT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 247515 202 - 13750039 ATTTGAGGCT----TTTAAGGTTAATGTAAATTTAGTGCTGACATTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTCGACAAGCCGTTGAA---GT----AATCATATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21971465 200 + 50472720 ATTTGAAG-TTTTCTTTAGGGT-----TAAATTTAGTGCTGATGTTTTAAAAATTACTATTAAGATGGCCA----TTGATTACAATGATTAGTGAATATAATCAAAATCACGAAACCAAATTATTTAA-GTAGACAAGCTGTTGAA---GC----AATCTTATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5065635 201 + 13128814 ATTTGAAGTTTTTCTTTATGGT-----TAAATTTAGTGCTGATGTTTTAAAAATTGCTATTAAGATGGCCA----TTGATTATGATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTAGACAAGCTGCTGAA---GC----AATTTTATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9642024 201 - 14377064 ATTTGAAGTTTTTCTTCATGGT-----TAAATTTAGTGCTGATGTTTTAAAAATTATTATTAAGATGGCCA----TCGATTACGATGATTAGTGAATATAATCAAAATCATGAAACCAAATTATTTAA-GTAGACAAGCTGCTGAA---GC----AATCTTATTCATTTAGAGGTGAGAAAGTAC----AAGTTGTCTTTTTAACTGAAACCAT--------------------AGTAAAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8780372 201 + 9889416 ATTTGAAGTTTTCCTTTATGGT-----TAAATTTAGTGCTGATGTTTTAAAAATTACTATTAAGATGGCCA----TTGATTACGATGATTAGTGAGTATCATCAAAATCATGAAACCAAATTATTTAA-GTAGACAAGCTGCTGAA---GC----AATCTTATTCATTTAGAGGTGAGAAAGTGC----AAGTTGTCTTTTTAACTGAAACCAC--------------------AGTAAAAT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19232253 209 + 47401472 -TTTGAAATTTTCTTTTAAGATTAATTTAAATTTAGAGCTGACATTTTTTAAATTTTTGCTAAAATGGCCA----CTCATCACAATGATTGGTCAATATAATCAAAGTCGTGAGACCAAATTATGGAA-GTAGACAAGCTGCTGCA---GCTAAGAATCACATTGGTTTAGAGGTGGGAAAGCAC----AAGTTGTCTTTTTAATTGAAACCAC--------------------AGTGAGAT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1127971 210 + 2694913 ATTTGAGATTTTCTTTTAAGATTAATTAAAATTTAGAGCTGACATTTTTAAAACTTTTGCTAAAATGATCA----CTCATCACAATGATTGGGCAATATAATCAAAGTTGTGAGACCAAATTATGTAA-GTAGACACGCTGTTTCA---GCTAACAATCACATTGGTTTAGAGATGCGAAAGTAT----AAGTTTTCTTTTTAACTGAAATCAC--------------------AGTGAGAT i proCoq1.NW_012144079v1 I 161 C 0 s otoGar3.GL873528 20783359 209 - 38779656 ATTTGAGATTTTC-TTTAAGGTTAATTTAAATTTAGAGCTGACATCTTTAAAATTTTTACTAAAATAGCCC----TTCATCACAATGACTAATCAATATAATTAAGATCATGAAACCAAATCGTGTAA-GTAGACAAGTGTCTGCA---GCTGACAATCATATTGGTTGAAAGGTGGCAAAGTGC----AAGTCGTCTTTTAAACTGAAACCAC--------------------AGTGAGAT i otoGar3.GL873528 I 6 C 0 s mm10.chr16 78155696 206 + 98207768 TTTCAAGGGTTTTCTTTGAGGATAATTTACATGTGGAGCTAATATTTTAAG---TTTTACTCAAATAACCA----TTGGTCACAATGATTCGTCAATGTAACTAAAATCTTGGAATCAAATTATG-AC-CAAGATAAGCTCCAGACCTTGC----AATCA---TCATGCCGACTGGAAAGAGGGCAGTGAGATCCCTTTTTTAACTGAAAACAC--------------------AACATAAT i mm10.chr16 C 0 C 0 s canFam3.chr31 13857415 203 + 39895921 ACGTGAAATTTTC-TTTAAGGT-----TAAGTTTAGAGCTGACATTCT-AAAATTATTATTAAAATGATCC----TTCATCACAATGATCAGTCAATCTAACCTAAATTATGAAACTAAATGATAGAA-GTAGATAAGCTGCTGAA---GCTAACAATAACAGTGATTTGGAGATGAGAAAGTAC----AAATTGCCTTTTTAACTGAAACCAC--------------------TGTAAGAT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3702651 227 - 6883506 ATTTGAGATTT---TTTAAAGTTAATTTAAATTTAAAGTTGACATTTTTAAAATTATCATTAAGATGGTCAGTGTTTGATCATAACAATTAGTCAATATAAACA------TAAGACCAATTTGTATGACACTGACCAGCTGCTGAA---GCTGACAATAACATTAGTTCAGAAGTGAGTAGATGT---GAAGTTGTCTTTTTCACTGGAAACACCTGTGGAGCTCCAAAGCACAAGTAGAAG i dasNov3.JH568778 C 0 I 135 a score=8716865.000000 s hg38.chr21_KI270874v1_alt 125858 574 + 166743 CAAGAA--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAAGTA--AAATTACATGACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTCTGGGAAAAGTTAGCACATTCTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATA-GAGAAGGCTTTTACCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGATTTGTTT---AAAAAAATAACTTCAGTATTGCAAATA---ATAAGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTCCCAAATCTGTGCCATCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTAGATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAACAAATGATAGCGTCAGACTGATACGCTATTAAAGCAAAAGAT------AACTTA-------------------CATTCGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT s panTro5.chr21 3751480 574 + 33445071 CAAGAA--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAAGTA--AAATTACATGACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTCTGGGAAAAGTTAGCACATTCTCCTGGGAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATA-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGATTTGTTT---AAAAAAATAACTTCAGTACTGCAAATA---ATAAGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTCCCAAATCTGTGCCATCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-CCAAACTTCACTAGATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAACAAATGATAGCATCAGACTGATATGCTATTAAAGCAAAAGAT------AACTTA-------------------CATTCGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17377280 573 + 46275980 CAAG-A--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAAGTA--AAATTACATGACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTCTGGGAAAAGTTAGCACATTCTCCTGGGAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATA-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGATTTGTTT---AAAAAAATAACTTCAGTACTGCAAATA---ATAAGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTCCCAAATCTGTGCCATCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-CCAAACTTCACTAGATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAACAAATGATAGCATCAGACTGATATGCTATTAAAGCAAAAGAT------AACTTA-------------------CATTCGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3316703 572 - 13858734 CAAG-A--AAAAAA--AAAACTCCCATT--------------------------------CACATTCTAAGTA--AAACTACATGACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAAG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTCTGGGAAAAGTTAGCACATTCTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATA-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGATTTGTTT----AAAAAATAACTTCAGTACTGCAAATA---ATAAGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTCCCAAATCTGTGCCATCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTAGATGATCTCAGGAACTTCTAGGGATTTAAATCATCATGAACAAATGATAGCATCAGACTGATATGCTATTAAAGCAAAAGAT------AACTTA-------------------CATTCGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4499738 572 + 32716333 CAAGAA--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTGAGTA--AAATTACATGA-CAAA--------------AAAATTTATTTGCATATATAAAAATGCTTTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTGCAAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCGCATTCTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATA-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTCTTT---AAAAAAATAATTTCAGTACTGCAAATA---ATACGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTAGATGATTTCAGAAACCTCTAGGGATTTAAATCATCATGAACAAATGATAGCGTCAGACTGATATGCTATTAAAGCAAAAGAT------AACTTA-------------------CATTCGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATGGCCTG--AAAAACT- i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155455226 572 - 185818997 CAAG-A--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAAGTA--AAATTATGTAACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCATTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACACAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTCCAGAGTCTATCATTA---AATTACCAGCTATT-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGTTT---AAAAAAATAATTCCAGTACTGCAAATA---AAAAGAATTAATTTTTCTTTCTATAGAC-TAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTGGATGATCTC-AGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAACAAAAGAT------AACTTA-------------------CATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162279506 572 - 192294377 CAAG-A--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAAGTA--AAATTATGTAACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCATTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTCCAGAGTCTATCATTA---AATTACCAGCTATT-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGTTT---AAAAAAATAATTCCAGTACTGCAAATA---AAAAGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTGGATGATCTC-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAACAAAAGAT------AACTTA-------------------CATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8760521 572 + 9440265 CAAG-A--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAAGTA--AAATTATGTAACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCATTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTCCAGAGTCTATCATTA---AATTACCAGCTATT-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGTTT---AAAAAAATAATTCCAGTACTGCAAATA---AAAAGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTGGATGATCTC-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAACAAAAGAT------AACTTA-------------------CATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8489395 571 + 21915920 CAAG----AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAAGTA--AAATTATGTAACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATT-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGTTT---AAAAAAATAATTCCAGTACTGCAAATA---AAAAGAATTAATTTTTCTTTCTACTGAC-TAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGCTGTTTT-TCAAACTTCACTGGATGATCTC-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAACAAAAGAT------AACTTA-------------------CATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15064193 572 - 90373283 CAAG-A--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAAGTA--AAGTTATGTAACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCGTTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATT-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGCTT---AAAAAAATAATTCCAGTACTGCAAATA---AAAAGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGATACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTGGATGATCTC-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAATAAAAGAT------AACTTA-------------------CATTTGTAACACTAGTTATAAATAATAATAGGATATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2249597 572 + 4234846 CAAG-A--AAAAAA--GAAACTCCCATT--------------------------------CACGTTCTAAGTA--AAATTATGTAACCAAA--------------AAAAGTTATTTGCATATATAAAAATGCTTTCAAACTAAGG-TGGATGTGTGCATAGAGATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACCAGCTATT-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGTTT---AAAAAAATAATTCCAGTACTGCAAATA---AAAAGAATTAATTTTTCTTTCTACAGAC-TAAAAGGTTTTGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTGGATGATCTC-GGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTACTATTAAAACAAAAGAT------AACTTA-------------------CATTTGTAACACTAGTTATAAATAATAATGGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 247717 573 - 13750039 CAAG-A--AAAAAA--GAAACTCCCATT--------------------------------CACATTCTAACTA--AAATTATGTTACCAAA--------------AAAAGTTATTTGGATATATAAAAATGCTTTCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTGTTTATGGGAAAAGTTGGCACATACTCCTGGCAAATCTTTCTGAGTCTATCATTA---AATTACCAGCTATA-GAGAAGGCTTTTAGCAAGATAGCTAAATTTCTAGTTGATAACTTTAAGACTTGTTT---AAAAAAATAATTTCAGTACTGCAAATA---AAAAGAATTAATTTTTCTTTCTACAGAT-TAAAAGGTTTTGT-----TATACTTTCAAATCTGTGCCACCTTCTGCCTGACACAC-TAT--TTAGAGCTGCTC-TTTTGTGTTAGTTGTTTT-TCAAACTTCACTGGATGATCTCAGGAACCTCTAGGGATTTAAATCATCACGAACAAATGACAGAGTCAGACTGATGTGCTATTAAAACAAAAGAT------AACTTA-------------------CTTTTGTAACAGTAGTTATAAATAATAATAGGACATTAGAGGGTTTTATTAGAAGAAA-AATTGCCTG--AAAAGCTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21971665 568 + 50472720 CAAG-AATAAAAAA--GAAACTCCCATT--------------------------------CACATTCCAAATA--AAATTATGTGATCAAA--------------AAAAGTTATTCGCATATATAAAAATGCTTCCAAACTAAGG-TGGATGTGTGCATAGAAATCTCCATGAAGAACCCAGATTTTATTTGTGGGAAAAGCTGGCACATTCTCCTGGCAAATCTTTCAGAGCCTATCATTA---AATTATCAGCTGTA-GAGAAGGTTTTTCACAAGATAGCTAAATTTCTGGTTGATAACTTTAAGAC--ATTT---TAAAAAATAATTTCAGTACTGCAAATA---AAAAG----AATTTTTCCTTCTACAGAC-TAAAAGGTTTTGT-----CATACTTCCAAATCTGTGCCACCTTCTGCCTGCCACAC-TAT--TTAGAATTGCTC-TTTTGCGTTAATTGTTTT-TCAAACTTCACTAGATGATCTCAGGGACCTCTAGGGATTTAAATCATCATGAAC-AATGATAGAGTCAGACTGATGTGCTATTAAAGC-AAAGAC------AACTTA-------------------CATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG-AAAAAACAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5065836 566 + 13128814 CAAG-AATAAAAAA--GAAACT-CCATT--------------------------------CACATTCCAAATA--AAATTATGTGATCAAA--------------AAAAGTTCTTCGTGTATATAAAAATGCTTCCAAACTAAGG-TGGATGTGTACATAGAAATCCCTATGAAGAGCCCAGATTTTATTTGTGGGAAAAGCTGACACATTCTCCTAGCAAATCTTTCAAAGTCTATCATTA---AATTATCAGCTATA-GAGAAAAATTTTAACAAGATAGCTAAATTTTTGGTTGATAACTTTAAGAC--ATTT---TAAAAAATAATTTCAGTACTGCAAATA---AAAAGAATTAATTTTTTCTTCTACAGAC-TAAAAGGTTTCGT-----TATACTTCCAAATCTGTGCCACCTTCTGCCTGCCACAC-TAT--TTAGAATTGCTC-TTTTGTG----TTGTTTT-TCAAACTTCACTAGATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAAC-GATGATAGAGTCAGACTGATGTGCTATTAAAGC-AAAGAC------AACTTA-------------------CATTTGTAACACTAGTTATAAATAAAAATAGGACATTAGAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9642225 558 - 14377064 CAGG-AATAAAAAA--GAAACTCCCATT--------------------------------CACATTCCAAATA--AAATTATGTGATCAAA--------------AAAAGTTATTCGCGTATATAAAAATGCTTCCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTATTTGTGGGAAAAGCTGGCATAGTCTCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTGTCAGCTATA-GAGAAAATTTTTAACAAGATAGCTAAATTTCTGGTTGA-----TTAAGAT--ATTT---TAAAAAATAATTTCAGTACTGCAAATA---AAAAG----AATTTTTCCTTCTACAGAC-TAAAAGGTTTTGT-----TGTACTTCCAAATCTGTGCCACCTTCTGCCTGCCACAC-TAT--TTAGAATTGCTC-TTTTGCG----TTGTTTT-TCTAACTTCACTAGATGATCTCAGGAACCTCCAGGGATTTAAATCATCATGAAC-AATGATAGAGTCAGACTGATGTGCTATTAAAGC-AAAGAC------AACTTA-------------------CATTTGTAACACTAGTTATAAATAATAATAGGACATTAGAGAGTTCTATTAGAAGAAA-AATTGCCTG--GAAAACTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8780573 567 + 9889416 CAAG-AATAAAAAA--GAAACTCCCATT--------------------------------CACATTCCAAATA--AAATTATGTGATCAAA--------------AAAAGTTATTCACATATATAAAAATGCTTCCAAACTAAGG-TGGATGTGTGCATAGAAATCCCTATGAAGAACCCAGATTTTATTTGTGGGAAAAGCTGGCACATTCCCCTGGCAAATCTTTCAGAGTCTATCATTA---AATTATCAGCTATA-GAGAAAATTGTTAACAAGATAGCTAAATTTCTGGTTGATAACTTTAAGAC--ATTT---TAAAAAATAATTTCAGTACTGTAAATA---AAAAGAATTAATTTTTCCTTCTACAGAC-TAAAAGGTTTTGT-----TATACTTCCAAATCTATACCACCTTCTGCCTGCCACAC-TAT--TTAGAATTGCTC-TTTTGCG----TTGTTTT-TCAAACTTCACTAGATGATCTCAGGAACCTCTAGGGATTTAAATCATTATGAAC-AATAATAGAGTCAGACTGATGTGCTATTAAAGC-AAAGAC------AACTTA-------------------CATATGTAACATTAGTTATAAATAATAATAGGACATTAGAGAGTTTTATTAGAAGAAA-ACTTGCCTG--AGAGACTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19232462 571 + 47401472 CAAGAA--AAGAAA--GGAACCCCAAAG--------------------------------CACATTTCACATG--AAATTATGTGACCAAA--------------AGAAGTCATTTGCATATATAAAAGTGCTTTCAGAATAAGG-TGGATATG----CAGAATCTTCTATGAAGAACCTAGATTTGGTCTATGGGGAAAGTTGACATAGTCTCCTGGCAAATCTTTCAGAGTTTATCATTA---AATTACAAGCTATA-TAGAAGCCTTTTAGCAAGATAGCTAAATTTATGGTTGATAAAATT--GACTTGTT----AAAAAAATATGTTCAGCACTGCAACTA---AAAAGAATTAATTTTTCTTTCTACACAC-AAAAAGGTTTTGT-----TATACTTCCAGATCTGTGTCACCTCCTGCCTGAAACACTTAT--TTATAACTGTTC-TTTTGTGTTAATTGTTTT-TCAAATTTCACTG-ATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAAT-AATGACAGAGTCAGATTGATGTGCTATTAAAGC-AAAGATTTGTAATACTTA-------------------CATTTGTAATACTAGTTATAAATAATAATAGGATATTAAAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i micMur3.chr31 C 0 C 0 s proCoq1.NW_012144079v1 1128181 572 + 2694913 CAAGAA--AAGAAA--GGAACTCCAAAG--------------------------------CACATTCCACATG--AAATTATGTGACCAAA--------------AGAAGTCATTTGCATATATAAAAGTGCTTTCAGAATAAGG-TAGATATG----CAGAACCTTCTATGAAGAACCCAGATTTGGTCTACAGGAAAAGTTGACATAGCCTCCTGGCAAATCTTTCAGAGCCTATCATTA---AATTACAAGCTATA-CAGAAGCCTTTTAGCAAGATAGCTAAATTTATGGTTGATAACATT--GACTTGTT----AAAAAAATATGTTCAGCACTGCAACTA---AAAAGAATTAATTTTTCTTTCTGTACATAAAAAAGGTTTTGT-----TATATTTCCAGATCTGTGTCACCTCTTGCCTGAAACACTTAT--TTAGAACTGTTC-TTTTGTGTTAATTGTTTT-TCAAATTTCACTG-ATGATCTCAGGAACCTCTAGGGATTTAAATCATCATGAAT-AATGACAGAGTCAGAATGATGTGCTATTAAAGC-AAAGATTTGTAATACTCA-------------------CGTTTGTAATACTAGTTATAAATAATAATAGGATATTAAAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTT i proCoq1.NW_012144079v1 C 0 N 0 s otoGar3.GL873528 20783568 597 - 38779656 CAAGAA--AAGAAA--AGAACACCACAG--------------------------------CACATTCCACATG--AAAATATGTGACCAAA--------------AGAAGTCATTTGCATACATAAAAGTGCTTTCAGACAAAGGTTGGATGCA----TAGACCCTTCTATGAAGAACCCAGATTTGGTTTACAGGAAAA-TTGACATAGATTTCTGGCAAATCTTTCAGAGTCTATCATTA---AATTACAAGCTATA-TAGAAAGCTGTTAGCAAGATAGTTAACTTTATGGTTGATAACTTTAAGACTTGTTTTAAAAAAAAATAAGTTTAGCACTGCAAATA---AAAAGAATTAATTTTCCTTCTTACACAC-AAAAAGGTTTTGT-----TATACTTCCAGATCTGTGTCACCTCCTGCCTGAAACGCTTAT--TTAGAACAGCTC-TTTTGTGTTAATTGTTTT-TCAGGTTTCACTACATGATCTCAGGAACCTCTAGAGATTTAAATCATCACGAAT-AATGACAGAGTCAGATTGGTGTGCTATCAAAGC-AAAGATTCGCATTACTTATTCGTATTACTTACATTCGTATTCGTAATGCTAGATATAAATAATAATAGCATATTAAAGTGTTTTATTAGAAAAAA-TATTGCCTG--AAAATCTG i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78155902 558 + 98207768 AAAG-A--AAAGAATGTAAACT---------------------------------------AAATCCCAAATG--TAACTGTATGACCAAA--------------AGAAGT-ATTTGCATGTAAAAATGTGTTGCCAGAGTAAGG-CAGATGTG----GAGAAGCCTCTATGGAACACACAGAATGAGACTATCTG-AAAGTTGGTATATTCTCCTGGAAAATCTTTT--AATCTATCATTGATTAATTATTAAATACA-TAGAAA--TGTATGCCCAGTTGATAAGTTTCTGGTTGGTGAATTTAATAC----TT---GGAAAACTAAGTTCAGTCCTGCAAATG-----AAGAATTAATTTTTCTTTCTACTCAA-CAAAAG--TTTGTCAACACAAACATCATGGCCTCTGTCTCCTCTGACCTGGGGCAT-TTCTATAAGAACTACTC-TGTTGTA----TTATTAT-TCAGATTCCATGAGATGATCTCAGGAACCTTGAGAGACTTAAAACATGGCAGGTTAGCTGGGGAGTCATATAGATATGCTATTAAAGC-AAAGAG------TGCTGA-------------------CATCTGTACCATTTCTTGTACATAATAATAAGACTTTAATGAGTTTTGTTAAAAGAAAGAAATGCCTGGAAAAAAATT i mm10.chr16 C 0 C 0 s canFam3.chr31 13857618 559 + 39895921 AATGAA--AAGAAA--ACAGCTCCAAAG--------------------------------CATACTATGAACT--GAATTATATGACCAAA--------------AAGAGTTCTTTGCATACATAAAAGTGCTTCCAGATTAAGG-TGTATACG----TAGAACCTTCTATGTAGAGCCCATAATTGGTTTATAGGAAAAATTGGCATATTCTCCTCACCAAAC-TACAGAGTCTACCATTA---AATTAACACCTATA-TAAGAGGCTTTTAACAAGATAGCTAAATTTCTGAT--------TTAAGACTTGGAA---AAAATATTAAGTTCAGTACCACAAATA---AAAGGAATCATTTTTGCTATCTACCAA--AAAAAGATTTTGC-----TGTGCTTCCGAATCTATGCCACTTCCTGCCTAAAATACTTAT--TTAGAACTGCTC-TTTTGTGTTATTTTTTTT-TCAAATTTCACTAGATGATCTCAGAAACCAATAGGGATTTAAATTTTCATGAAT-AATGAGGGAGTCAGATTGATATGGTATTAAAGC-AAAAAT------AACTTA-------------------CATTTATAACACTAGTTATAAATAATAATAGGACATTAAAGAGTTTTATTAGAAGAAA-AATTGCCTG--AAAAACTC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3703013 612 - 6883506 caggag--aaaaaa--ccaactttcattggggaacagatgtagctcagtgattgagcacctgcttcccatgtacgaggtcctgcgttcaaaccccagtacctcctaaagaaaaattaaaaaAAGAAAAGTACTTCCAGACTAAGA-TGGATGTA----TAGCAATGTCTATACAGAATGTAGATTTGGTTAATGGCAAAAATTGGCATATTTCCCTCGCAAATCTTTC--AGTCTGTCAATA---AATTACCAGCTATGTGAGAAGACTTTTAGAAAGATAGCTAAATTTCTTGTTGGTAACTTTAAGACCTAG-----AAGAAAATTAGTTTAGTACTGCAAAAAAAAAAAAGAATCAACTTTTCTTTCTACCCAC-AAAAGGCTTTTTC-----TGTGCTTCCAGATCTGCCCCATTTCCTGCCTGAAACATTTAT--TTAGAACTGCTCTTTTTTTGTTAATTTTTTTCCCAAACTTCGCAAAATGATCTCAGAAATCAATAAGGATTAATATAGTCATG----ATTAATCAAGTCAGATAGATATGTTAATAAAGC-AAAGAT------AAGTCG-------------------TATTTATAACG-TAGTTATAAATAATAA---GACATTAATCAGTTATAGTAGAATACA-ATTTGCATG--AAAGACTC i dasNov3.JH568778 I 135 C 0 a score=7754295.000000 s hg38.chr21_KI270874v1_alt 126432 531 + 166743 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATT-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAA-TTTGTGTGCAGCAC--ATTGTTGCTCCAGCTTAAAAACCTCCTGTGTGGTA-AATGCTTG-GCAGCCCTGGGGAAGGCAATGAACACGGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAACTCCATTGTTT--GTGAAATTCTATTTTGACTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTGTCTTTAGCATGATGTGTTTCTTTCC-TAAACTCCACACAG----------ATAAGAAGATAAATTTGATCATGAATTTCTAAAAGTAGAAATCATAGGTTT--TTT-AG s panTro5.chr21 3752054 531 + 33445071 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAGCAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATT-TCTTGT-CTTCTTTTGTGTTTC-AGCTGAA-TTTGTGTGCAGCAC--ATTGTTGCTCCAGCTTAAAAACCTCCTGTGTGGTA-AGAGCTTG-GCAGCCCTGGGGAAGGCAATGAACACGGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATTTTGACTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAGCTTGATGTGTTCCTTTCC-TAAACTCCCCACAG----------ATAAGAAGATAAATTTGATCATGAATTTCTAAAAGTAGAAATCATAGTTTT--TTT-AG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17377853 531 + 46275980 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATT-TCTTGT-CTTCTTTTGTGTTTC-AGCTGAA-TTTGTGTGCGGCAC--ATTGTTGCTCCAGCTTAAAAACCTCCTGTGTGGTA-AGAGCTTG-GCAGCCCTGGGGAAGGCAATGAACACGGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATTTTGACTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAGCTTGATGTGTTCCTTTCC-TAAACTCCCCACAG----------ATAAGAAGATAAATTTGATCATGAATTTCTAAAAGTAGAAATCATAGTTTT--TTT-AG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3317275 531 - 13858734 CCTCGTATTAGGTTAACCTTCTAGAATTTCTCAAGCAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATT-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAA-TTTGTGTGCGGCAC--ATTGTTGCTCCAGCTTAAAAACCTCCTGTGTGGTA-AGAGCTTG-GCAGCCCTGGGGAAGGCAATGAACACAGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTCAAATTCCATTGTTT--GTGAAATTCTATTTCGACTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAGCTTGATGTGTTTCTTTCC-TAAACTCCCCACAG----------ATAAGAAGATAAATTTGAACATGAATTTCTAAAAGTAGAAATCATAATTTT--TTT-AG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4500310 528 + 32716333 --TCATATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCGGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATTC-ACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATT-TCCTGT-CTTCTTTCGTGTTTT-AGCTGAA-TTTGTGTGCGGCAC--ATTGTTGCTCCAGCTTAAAAACCTCCTGTGTGGTA-AGGGCTTG-GCAGTCCTGGGGAAGGCAGTGAACATGGTGAAATTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCTATTGTTT--GTGAAATTCTGTTTCGACTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAGCTTGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAAGATAAATTTGACCATGAATTTTTAAAAGTAGAAATCATAATTTT--TTT-AG i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155455798 534 - 185818997 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACC-AATTATTTCTGCAAAATCAAAGTCAATACCTGCGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATC-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAG-TTTGTGTGCGGCACACATTGTTGCTTCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTAAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATCATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATAATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAAGATAAAATTGATCATGAATTTCTAAAAGTAGAAATCATAATTTT--TTTTGG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280078 535 - 192294377 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCGAATTATTTCTGCAAAATCAAAGTCAATACCTGCGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATC-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAG-TTTGTGTGCGGCACACATTGTTGCTTCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATCATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATAATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAAGATAAAATTGATCATGAATTTCTAAAAGTAGAAATCATAATTTT--TTTGGG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8761093 535 + 9440265 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCGAATTATTTCTGCAAAATCAAAGTCAATACCTGCGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATC-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAG-TTTGTGTGCGGCACACATTGTTGCTTCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATCATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATAATGTGTTTCTTTCC-CAGACTCCCCACAG----------ATAAGAAGATAAAATTGATCATGAATTTCTAAAAGTAGAAATCATAATTTT--TTTGGG i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8489966 534 + 21915920 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGCGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATC-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAG-TTTGTGTGCGGCACACATTGTTGCTCCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAAAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTGTCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATAATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAAGATAAAATTGATCATGAATTTTTAAAGGTAGAAATCATAATTTT--TTT-GG i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15064765 531 - 90373283 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCGAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATC-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAG-TTTGTGTGCGGCAC--ATTGTTGCTCCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGATATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAAGAT-AAATTGATCATGAATTTCTAAAAGTAGAAATCATAATTTT--TTT-GG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2250169 531 + 4234846 CCTCCTATTAGGCTAAC---CTAGAATTTCTCAAACAAACCGAATTATTTCTGCAAAATCAAAGTCAATACCTGCGTCTGTTTAT-AAAATCAACATGTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAATGTTTTTAATTGATC-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAG-TTTGTGTGAGGCACAGATTGTTGCTCCAGCTTAAAAACCCCCTGTGTCGCA-AGGGCTTGGGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAGGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATCTTGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATAATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAAGATAAAATTGATCATGAATTTCTAAAAGTAGAAATCATAATTTT--TTT-GG i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 248290 534 - 13750039 CCTCCTATTAGGTTAACCTTCTAGAATTTCTCAAACAAACCGAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTAT-AAAATCAACATTTCACAATGCAACTATTTTTTTT-CTTTTCATTTAACATTTTTAAACGATC-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAG-TTTGTGTGTGGCAC--ATTGTTGCTCCAGCTTAAAAACCCCCTGTGTGGTA-AGGGCTTGAGCAGCCCTGGGGAAGGCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGACATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTGTCTCGGCTAAATAGAGGGACTTTTGTTCAGGCTTTTGTTTTCTTTAGCATGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAGAAGATAAGTTTGATCATGAATTTCTAAAAGTAGAAATCATAATTTT--TTTGGG i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21972233 530 + 50472720 CCTTCTATCAGGCTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCAGTTTATAAAAATTACCAATTCACAATGCAACGA-TTTTTT--CTTTTCATTTAACATTTTT-AATGATC-TCTTGT-CTTCTTTTGTGTTTT-AACTGAATTTTGTGTGCAGCAC--ATTGTTGCTCCAACTTAAAAACCTCCTGTGTGGTG-AGGGCTTG-GCAGCCCT-GGGAAGCCAATGAACATGGTGAAATTCA--GTACAG--TG----TGGTAAGACAAGGAGAGCATG-ATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGATATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATTTCAGCTAAATAGAAGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAACATGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAAAAGATAAATTTGATCATGAATTTCTAAAAGTAGAAATCATTATTTTCTTTT-AG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5066402 533 + 13128814 CCTTCTATCAGGCTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGAGAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAATCACCAATTCACAATGCAACTA-TTTTTTTCCTTTTCATTTAACATTTTTAAATGATC-TGTTGT-CTTCTTTTGTGTTTT-AGCTGCAATTTGTGTGCAGCAC--ATTGTTGCTTCAACTTTAAAACCTCCTGGGTGGTG-AGGGCTTG-GCAGCCCT-GGGAAGCCAATGAACACGGTGAAATTCA--GTGCAG--TG----TGGTGAGACAAGGAGAGCATG-ATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGATATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATTTCAGCTAAATAGAGGGGC-TTTGTTCAGGCTTTTGTTTTCTTTAATTTGATGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAAAAGATAAATTTGATCATGAATGTATAAAAGTAGAGATCATTATTTTCTTTT-AG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9642783 531 - 14377064 CCTTCTATCGGGCTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATGCCTGAGTCTGTTTATAAAAATCACCAATTCACAATGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATC-TCTTGT-CTTCTTTTGTGTTTT-AGCTGAA-TTTGTGTGCAGCAC--ATTGTTGCTCCAACTTAAAAACCTCCTGTGTGGTG-AGGGCTTG-GCAGCCCT-GGGAAGCCAATGAACATGGTGAAAGTCA--GTGCAG--TG----TGGTAAGACAAGGAGAGCACG-ATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGATATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTATTTCAGCTAAATAGAGGGAC-TTTGTTCAGGCTTTTGTTTTCTTTAACTTGAGGTGTTTCTTTCC-CAAACTCCCCACAG----------ATAAAAAGATCAATTTGATCATGAGTTTCTAAAAGTAGAAATCATTATTTTCCTTT-AG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8781140 525 + 9889416 CCTCCTATCAGGCTAACCTTCTAGAATTTCTCAAACAAACCAAATTATTTCTGCAAAATCAAAGTCAATACCTGAGTCTGTTTATAAAAAT---CAATTCACATTGCAACTA-TTTTTTT-CTTTTCATTTAACATTTTTAAATGATC-TCTTGT-CTTCTTTTGTGTTTT--GCTGAA-TTTGTGTGCAGCAC--ATTGTTGCTCCAACTTAAAAACCTCCTGTGTGGTG-AGGGCTTG-GCAGCCCTGGGGAAGCCAATGAACATGGTGAAATTCA--GTGCAG--TG----TGGTAAGAC---GAGAGCATG-ATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATTATTACAACTGCTTTGAAGATATTTGAATTTTAAATTCCATTGTTT--GTGAAATTCTCTTTCAGCTAAATAGAGGGAC-TTTGTTCAGGCTTTTATTTTCTTTAACTTGATGTATTTCTTTCC-CAAACTTTCCACAG----------ATAAAAAGATAAATTTGATCATGAGTTTCTAAAAGTAGAAATCATCATTTTCTTTT-AG i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19233033 531 + 47401472 CCTTCTATCAGGTTAACCCTCTAGAATTTCTAAGACAAACCATATTATTTCTACAAAATCAAAGCCAGCATCTGAGTCTGTTTATAAAAATCACCGATTCACAATGCAACTA-CTTGTC--CTTTTCATTTAACATTTTTAAATGATC-TTTTGT-CCTCTTTTGTCCTTT-AGCTGAA-TTTGTCTGCACTAC--ATTGTTGTTCCAGCTTTAAAACCTCTTGTGTGGTA-AACGCTTG-GTAGCCCTGGGGAAGGCAGTGAGCATTGTTAAATTCA--GTGCAG--TG----TGGTAACACAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAAAAATTATAATTACAACTGCTTTGAAGACATTTAAATTTCCAATTCCATTGTTT--GTGAAATTCCATTTCAACTAAAGAGAGGGAC-TATGTTCAGTCTCTTTTTTTC-TTAATCTGATGTGTTTCTTCCC-CAAACTCTCCACTG----------ATAAGAAGGTATATTTAATCATGAATTTCTAAAAGTAAAAGTCATAATTTCTTTTC-AA i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20784165 523 - 38779656 -CCTCTATCAGGTTAGCCTTCTAAAATTCCTAAGACAAATCAAATTATTTTTACAAAATCAAAGCCAACAGCTGACTCTGTTTATAAAAATCACCAATTCACAGCGCAACTA-TTTGTC--CT-----TTTAACATTTTAAAATGATC-TTCTGT-CCTCTTTTGTGTTTT-AGCTGAA-TTTGTGTGCACT----ATTGTTGTTCCAGCTTAAAAACCTCCTGTGTGGCA-AGGGCTTG-GGAGCCCTGGGGAAGACAGTGAACATTGTTAAATTCA--GTGCAG--TG----TGGTAACATAAGGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATAATTACAACTGCTTTGAAGATATTTACATTTTAAATTCCATTGTTT--GTGAAATTGTGTTTCGGTTAAAGAGAGGGAC-TTTGTTCAGGCTGGTTTTTTC-TTAACCTAATATGTTTCTTCCC-CAAGTTCACCGTGG----------ATAAAAAAATATATTTGTTCATGAATTTCTAAAACCAAAACTCACGATATCTTTTC-CA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78156460 528 + 98207768 CCCTCTATCGGGTTAGCCTTCAAGAATTTCCC-GACAGACTGAATTATTTTCACAAAATTAAAACCAATATCAGATCCTGTTTATTAAAATCACTCCCTCAATGTCCGACTA-TT------CTTTTCCTTTGACATTTTTAAATGCTCGTCTTGT-CTTCCTTTGTGTTTTTAGATGAA-TTCGTGTGCAGTAC--ATTG-------ATCAAAAGAAAGCGCTGCAAG----AGAGCTTG-CCAGG-CTGGGGAAGGCAGTGAGCACTG---AATTCACTGTTCAGCATC----TAGTAACACAAGAGGCATGTGGATAATAGTTAGAGATCTAGCACACCTTAGTGGAAGCAATTATAACTACAACTGCTTCAAACACATTTCCACTTC-AATTCCATTGTTTCAATGAAATTTCTTTGTACCTAAATAAAGGGAT-ATTGGTTCGGCTTGAGCTCCTCTTAATTATGTATGCTTCCTTCCACTGAATCCTCACAGGAATTATGCAATGAGAGGA--AACCTGATCATGAATTTC-AAAACCAAAAGGCCTCCTCTCTTTTC-AG i mm10.chr16 C 0 C 0 s canFam3.chr31 13858177 529 + 39895921 CCTCCTGTCAGGTTAACATTCTTGAATTTCTCAGACAAATCAAATTA-TTCTACAAAATCAAAGCCAATATACAAGTCTGTTTATAAAAATCACCAATTCAAAATGCAACTA-TTTGTC--CTTCTCATTTAAAATTTAAAAATGGTC-TCTTGC-TCTC-TTTGTGTTTT-AGTTGAA-TTTGTGCATAGTAC--ATTGTTGTTTCAGCTCAAAAACCTCCTGTGTGGCAGAGGGCTTG-GCAGCCCTGAGAAAGGCAGTGAACACTGTTGAATTCA--GTGCAG--TGCATTTGCTAACA---GGAGAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACAATTATAACTACAACTGCTTTGAAGACCTTTACATTTTAAATTCCATTGTTTTAGTTTAATTCCACTTTACCTAAATAGAGGGGC-TGTGTTTGGACAT---TTTTTCTTAAACTGATTTGTTTCTTCCC-CAAATTCCCCATGG----------ATTAAAAGATAATTTTGATAATAAACTTCTAAAAACggggcacctgggtgg--ttc-tg i canFam3.chr31 C 0 I 385 s dasNov3.JH568778 3703625 530 - 6883506 CCTTGTATCAGGTCAGCCTTCCAGAATTTCTTAGGCAAACCAAATTACTTCTACAAAATCAAAATCAATATCCAAGTCTCTTTATAAAAAGCATCAATTCAAAATGCAACTG-TTTGTT--CTTTACATTTCAAATTGTAAAATGTTC-TCTTTTCCTTTTTTTGTGTTTT-AGCCGAA-TTTATTTGCAGTAC--ATTGTTGTTCCAGCTCAAAAGCCTTCTCTGTGGCAGAGGAGTTG-GCAGCTTCCTGAAAGGCAGTGGACATTGTTGAATTCA--GCACAG--TGCATTTGGTAACGCAAGGAAAGCATGAATAATATTTGGAGATCTAGCACACCTTAGTGGAAACATTTATAACTACAACTCCCTTGAAGA----TGAATTTTAAATTCCATTGTTTTAGTGAAATTCTATTTTACTTAAATAGAAGGAC-TTTGTTCAGGATT---TTTCCCTTGACATTGCATGCTACTTCCG-CAAACACTGCACAG----------AT---AAGATTAATTTGATCGTACATCTCTAAAAGTAGACATCTCAATTTCTTTCC-AG i dasNov3.JH568778 C 0 C 0 a score=321357.000000 s hg38.chr21_KI270874v1_alt 126963 25 + 166743 AATTAGCATAAAATTAT-TGTACAAC s panTro5.chr21 3752585 25 + 33445071 AATTAGCATAAAATTAT-TGTACAAC i panTro5.chr21 C 0 C 0 s panPan2.chr21 17378384 25 + 46275980 AATTAGCATAAAATTAT-TGTACAAC i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3317806 25 - 13858734 AATTAGCATAAAATTAT-GGTACATC i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4500838 25 + 32716333 AATTAGCATAAAATTAT-TGTACAAC i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456332 25 - 185818997 AATTAGCATAAAATTAT-TGTACAAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280613 25 - 192294377 AATTAGCATAAAATTAT-TGTACAAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8761628 25 + 9440265 AATTAGCCTAAAATTAT-TGTACAAC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8490500 25 + 21915920 AATTAGCATAAAATTAT-TGTACAAC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065296 25 - 90373283 AATTAGCATAAAATTAT-TGTACAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2250700 25 + 4234846 AATTAGCATAAAATTAT-TGTACAAC i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 248824 25 - 13750039 AATTAGCATAAAATTAT-TGTATAAC i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21972763 25 + 50472720 AATTAGTGTAAAATTAT-TGTACAAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5066935 25 + 13128814 AATTAGTATAAAATTAT-TGTACAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643314 25 - 14377064 AATTAGTATAAAATTAT-TGTACAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8781665 25 + 9889416 AATTAGTATAAAATTAT-TGTACAAC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19233564 25 + 47401472 TATTTGCATTAAAATAT-TACACAAT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20784688 25 - 38779656 AATTTGCATAAAAGAAT-GATACAGT i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78156988 25 + 98207768 AATATGCATGATGTTTT-CATAGAGC i mm10.chr16 C 0 C 0 s dasNov3.JH568778 3704155 26 - 6883506 AGTATACATAAAATTATCTGTACAAC i dasNov3.JH568778 C 0 C 0 e canFam3.chr31 13858706 385 + 39895921 I a score=937395.000000 s hg38.chr21_KI270874v1_alt 126988 81 + 166743 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TATTTGCCATCATGGTCAC--ATAT--------------AAAGTGTCAGATTATTCTTG-------TT s panTro5.chr21 3752610 81 + 33445071 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TATTTGCCATCATGGTCAC--ATAT--------------AAAGTGTCAGATTATTCTTG-------TT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17378409 81 + 46275980 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TATTTGCCATCATGGTCAC--ATAT--------------AAAGTGTCAGATTATTCTTG-------TT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3317831 81 - 13858734 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TATTTGCCATCATGGTCAC--ATAT--------------AAAGTGTCAGATTATTCTTG-------TT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4500863 81 + 32716333 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TATTTGCCATCATGGTCAC--ATAT--------------AAAGTGTCGGATTATTCTTG-------TT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456357 81 - 185818997 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TCTTCGGCATCATGGTCAC--ATAC--------------AAAGTGTCACATTCTTCTTG-------TT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280638 81 - 192294377 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TCTTCGGCATCATGGTCAC--ATAC--------------AAAGTGTCACATTCTTCTTG-------TT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8761653 81 + 9440265 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TCTTCGGCATCATGGTCAC--ATAC--------------AAAGTGTCACATTCTTCTTG-------TT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8490525 81 + 21915920 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TCTTCGGCATCATGGTCAC--ATAC--------------AAAGTGTCAGATTCTTCTTG-------TT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065321 81 - 90373283 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TCTTCAGCCTCATGGTCAC--ATAC--------------AAAGTGTCAGATTATTCTTG-------TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2250725 81 + 4234846 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TCTTCGGCATCATGGTCAC--ATAC--------------AAAGTGTCAGATTCTTCTTG-------TT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 248849 81 - 13750039 CCTCCATGGGCTATCAAATTGGGAGCAATCCAA-----TTT-------------TCTTCGGCATCATGGTCAC--ATAC--------------GAAGTGTCAGATTCTTCTTG-------TT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21972788 78 + 50472720 CCTCCAGGGGCTATCAATTTAGGAGCAATCCAA-----TTT-------------TATTTGCCATCATGGTGAT--GTAT--------------AAAGTGTCAGA---TTCTTG-------TC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5066960 86 + 13128814 CCTCCATGGGCTATCAAATTAGGAGCAATCCAATTTTTTTT-------------TTTTTGCCATCATGGTCAT--GTAT--------------AAAGTGTCAGATTCTTCTTG-------TT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643339 81 - 14377064 CCTCCATGGCCTATCAAATTAAGAGCAATCCAA-----TTT-------------TATTTGCCATCATGGTCAT--GTAT--------------AAAGTGTCAGATTCTTATTG-------TT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8781690 77 + 9889416 CCTCCATGGGCTATCAAATTAGGAGCAATCCAA-----TTT-------------T-TTTGCCATCATGGTCAG--GTAT--------------AAAGTGTCAGA---TTCTTG-------TT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19233589 73 + 47401472 CCCCCAGAGGCTATCAAATTAAGAGCAATTTCA-----TTT-------------TATTTGCCATA----------ATAT--------------AAAGTGTCATATTTTTCTTA-------TT i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20784713 109 - 38779656 TCCTCAGAGACTGTCCAATTAAAGACTATTTGA-----TTTGCCATCATGGTCATATTTTTCTTATAAATTATTCATATACATTTAACCTATAAAAGTGTCATATTTTTGTTA--------T i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78157013 95 + 98207768 TCCCCTGAAGCTACTGTACCAGAGACAATTGCA-----TTT-------------CATCTGGCATCACGGTAAA--ATAT------AAAGTAT-AAAGTATCACACACCCCGTGCACCCCATC i mm10.chr16 C 0 C 0 s canFam3.chr31 13859091 69 + 39895921 CCTCCTTAAACGTACAATTTAGGGGCAATGCCA-----TCA-------------T------------GGTTAA--ATGT--------------AAAGTGTTGGATTTTTCTTG-------CT i canFam3.chr31 I 385 C 0 s dasNov3.JH568778 3704181 79 - 6883506 -TCCCTAAAGCTATCAAATTAGGGACAGTTCCA-----TTT-------------TATTTA-CATCACAGCCAA--ATGT--------------AAAGTGTCACATTTTGCTTG-------TT i dasNov3.JH568778 C 0 I 2021 a score=2298966.000000 s hg38.chr21_KI270874v1_alt 127069 176 + 166743 AGATGATTATTGTACATTTAACTTAGAAAAGCTTCTCAGGTCTGCTCCTGAGATGCTTGAAAGACTT-TTGGTTTAAATAGGTTGCATATGTTCTGCTGTTAATGGCTGAC-CGTTTTTATTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCGCAAATATT s panTro5.chr21 3752691 176 + 33445071 AGATGATTATTGTACATTTAACTTAGAAAAGCTTCTCAGGTCTTCTCCTAAGATGCTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTTTTTATTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCACAAATATT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17378490 176 + 46275980 AGATGATTATTGTACATTTAACTTAGAAAAGCTTCTCAGGTCTTCTCCTAAGATGCTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTTTTTATTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCACAAATATT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3317912 176 - 13858734 AGATGATTATTGTACATTTAACTTAGAAAAGCTTCTCAGGTCTGCTCCTGAGATGCTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTTTTCATTTCATATTACTAAAATGTAATCAAGAAAA-TGAGAGTAGAAAAT-ACATCACAAATATT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4500944 176 + 32716333 GGATGATTATTGTACCTTTAACTTACAAAAGGTTCTCAGGTCTGGTCCTGAGATGCTTGAAAGACTT-TTGGTTTAAATAGGTTGCATATGTCCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCACAAATATT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456438 176 - 185818997 AAATGACTATTGTGTATTTAATTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCACAAATATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280719 176 - 192294377 AAATGACTATTGTGTATTTAATTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCACAAATATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8761734 176 + 9440265 AAATGACTATTGTGTATTTAATTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCACAAATATT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8490606 171 + 21915920 AAATGACTATTGTGCATTTAATTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCT-----CTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCACAAATATT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065402 176 - 90373283 AAACGACTATTGTGCATTTAACTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACTGAAATGTAATCAAGAAAA-AGAGAATAGAAAAT-ATATCACAAATATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2250806 176 + 4234846 AAATGACTATTGTGCATTTAATTTACAATAGCTTCTCAGGTCTGCTCTTAGGATGTTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCCCTTTACTTCATATTACTAAAATGTAATCAAGAAAA-AGAGAGTAGAAAAT-ACATCACAAATATT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 248930 176 - 13750039 AAACGACTATTATGCATTTAACTTACAATAGCTTCTCAGGTCTGCTCTTAGGATATTTGAAAGACTT-TTGGTTTACATAGGTTGTATATGTTCTGCTGTTAATGGCTGAC-CCTCTTTACTTCATATTACCAAAATGTAATCAAGAAAA-AGAGGGTAGAAAAT-ACATCACAAAGATT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21972866 165 + 50472720 AAATGATTATTGTACCTTTAACCTACAAAAGGTTCTCAGGTCTGCTCTTGGGATACTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTCCTGCTGTTAATGGCTGAC-CTTCTTTGCTTCATATTACTAAAATGTAAT------------ATGTAGAAAAG-ACATCAAAAATATT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067046 176 + 13128814 AAATGATTATCATACCTTTAACCTACAAAAGGTTCTCAGGTCTGCTCTTGGGGTGCTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTCCTGCTGTTAATGGCTGAC-CTTCTTTACTTCATATTACTAAAATGTAATCAAGGAAA-AGAGAGTAGAAAAG-ACATAAAAAATATT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643420 176 - 14377064 AAATGATTATCGTACCTTTAACCTGCAAAAGGTTCTCAGGTCTGCTCTGGGGATACTTGAAAGACTT-TTGGTTTAAATAGGTTGTATATGTCCTGCTGTTAATGGCTGAC-CTTCTTTACTTCATATTACTAAAAGGTAATCAAGGAAA-AGAGAGTAGAAAAG-ACACCAAAAATATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8781767 176 + 9889416 AAATGATTATCATACCTTTAACCTACAAAAGGGTCTCAGGTCTGCTCTTGGGATGCTTGAAAGACTT-CTGGTTTAAATAGGTTGTATATGTCCTGCTGTTAATGGCTGAC-CTTCTTTACTTCATATTACTAAAATGTAATCAAGGAAA-AGAGAGTAGAAAAG-ACATCAAAAATATT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19233662 172 + 47401472 AAATGATTCTTATACATTTAACCTACATAAGCTTGACAAGTCCACCCTTGGGATGTTTCAAAGAC---TGGGTTCAGATAGGTTGTGTATGTTCTGTCATTAGTGGATGAC-CTTCTTTATTTTATGCTACTAAAATGTCATCAAGAAAA-A--GAGTGAAAAAG-ACATCACAAATATC i micMur3.chr31 C 0 C 0 s otoGar3.GL873528 20784822 175 - 38779656 AAGTTACTTTTATACATTTAACCTACAAAAGGTTGTCAGATCCACTCTTGGAATGCTTCAAAGACCTGTAAGTTCAAATAGATTGTATACATTCTGTCATTGGTGGCTTCT-CTTCTTTATTTCATGCTACTAAAATGTCATCAAGAAAA-A--GAGTGAGAAAG-ACATCACATCTATC i otoGar3.GL873528 C 0 I 313 s mm10.chr16 78157108 163 + 98207768 AAACTACTAGTGTATTCTTGAACCACAAAGGTGTATCAGATCAGCTTTTCAAAGACTTCAAACACTT-CTGTTTGCAAGTCAGTCTATGTATTCTGCTGGTGGGG--------TCATTTAGGCCATACGACTAAAATGTCATGGAGAAA-------GCAGAAAAG-ACATCACAAACATC i mm10.chr16 C 0 C 0 s canFam3.chr31 13859160 172 + 39895921 AAATGATTGCTGTGATTCTGATTTGCATAAGCCTGTCAGGTCAGCTCTGGGGATACTTCAAAGACT--TGGTTTCAAATAAGTTGTACATGGTCTACTCTTAATGGCTGACTCCCCTTCACTTCCTACAACTAAAATGTCATCAAGAAA---GAGAGTAAAAAAA---ATCATAAATATC i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3706281 178 - 6883506 AAATTACTGTTGTACATTCGAGCTACAAAAGTCTGCCACTCCAGCTCTAGGGATGCTTCAGAAATTT-TGGTTACAATTAGGTTAGATATGTTCTACCATTAACTGCTGAT-CTCCTTTAGTTCATAATACTAAAATGTCATCAAGAAAATAAAACGTGGAAAAAAACCTCATATATATC i dasNov3.JH568778 I 2021 C 0 a score=214545.000000 s hg38.chr21_KI270874v1_alt 127245 22 + 166743 CAGTCTACTATCTAGACAATTT s panTro5.chr21 3752867 22 + 33445071 CAGTCTACTATCTGGACAATTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17378666 22 + 46275980 CAGTCTACTATCTGGACAATTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318088 22 - 13858734 CAGTCTACTATCTAGACAATTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501120 22 + 32716333 CAGTCTACTATCTAGACAATTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456614 21 - 185818997 CAGTCTACTATCT-GACAATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280895 21 - 192294377 CAGTCTACTCTCT-GACAATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8761910 21 + 9440265 CAGTCTACTCTCT-GACAATTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8490777 21 + 21915920 CAGTCTACTATCT-GACAATTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065578 15 - 90373283 CAGTCTACTAT-------ATTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2250982 21 + 4234846 CAGTCTACTATCT-GACAATTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 249106 21 - 13750039 CAGTCTACTATCT-GACAATTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21973031 22 + 50472720 CAGTCTACTATACAGGCAGTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067222 22 + 13128814 CAGTCTACTATACAGACAGTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643596 22 - 14377064 CAGTCTACTATACAGACAGTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8781943 22 + 9889416 CAGTCTACTATACAGACAGTTT i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19233834 22 + 47401472 CAAACTACTATCTAGACAATTT i micMur3.chr31 C 0 C 0 s mm10.chr16 78157271 22 + 98207768 TATCCTGTTATCCAGAGAGGCT i mm10.chr16 C 0 I 2 s canFam3.chr31 13859332 15 + 39895921 CATTCTA-------GATAATTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3706459 22 - 6883506 CATCCTACTCTACAGACAATCT i dasNov3.JH568778 C 0 C 0 e otoGar3.GL873528 20784997 313 - 38779656 I a score=684949.000000 s hg38.chr21_KI270874v1_alt 127267 50 + 166743 CAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTGTAGAGTT s panTro5.chr21 3752889 50 + 33445071 CAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTGTAGAGTT i panTro5.chr21 C 0 C 0 s panPan2.chr21 17378688 50 + 46275980 CAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTGTAGAGTT i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318110 50 - 13858734 CAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTGTAGAGTT i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501142 50 + 32716333 CAAAAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTGTAAAGTT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456635 50 - 185818997 CAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTATAGAGTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280916 50 - 192294377 CAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTATAGAGTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8761931 50 + 9440265 CAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTATAGAGTT i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8490798 50 + 21915920 CAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTATAGAGTT i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065593 50 - 90373283 AAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTATAGAGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2251003 50 + 4234846 CAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTATAGAGTT i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 249127 50 - 13750039 CAAGAGCTTTCAATTTTATCTCCTGTTCCATTATCTTC----AATTATAGAGTT i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21973053 50 + 50472720 CAAGAGCTTTCAGTTTTACCTCCTGTTACATTATCTTC----AATCATAGAGCC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067244 50 + 13128814 CAAGAGCTTTCAGTTTTATCTCCCATTACGTTATCTTC----AATCAAAGAGCC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643618 50 - 14377064 CAAGAGCTTTCAGTTTTATATCCTGTTACATTATCTTC----AATCAAAGAGCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8781965 50 + 9889416 CAAGAGCTTTCAGTTTTACCTCCTGTTACATTATCTTC----AATCATAGAGCC i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19233856 50 + 47401472 CAAGAGCTTTCAATTTTATCTCCTCTTCCATCATCTTC----TATTGCAGAGTT i micMur3.chr31 C 0 I 39 s otoGar3.GL873528 20785310 50 - 38779656 cAAGTGCTTTCAATTTAATCATCTGTTCCATCATCTTC----TATTGTAGAGTT i otoGar3.GL873528 I 313 C 0 s mm10.chr16 78157295 45 + 98207768 GGAATGCTT---GGTTTGCATCCTGTTCCATGG--CTC----TGTTACACAGTT i mm10.chr16 I 2 C 0 s canFam3.chr31 13859347 50 + 39895921 CAAAAGCTTTCAATTTTATATTCTGTTCCATCATCCTG----CAGATTAGAGTT i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3706481 52 - 6883506 CAAGTGCTATCAAATTTATCT--TGTTATAGTATCTTCCTATCACCTTAGATTT i dasNov3.JH568778 C 0 C 0 a score=130016.000000 s hg38.chr21_KI270874v1_alt 127317 11 + 166743 TGGATAGGAAA s panTro5.chr21 3752939 11 + 33445071 TGGATAGGAAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17378738 11 + 46275980 TGGATAGGAAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318160 11 - 13858734 TGGATAGGAAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501192 11 + 32716333 TGGATAGGAAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456685 11 - 185818997 TGGATAGGGAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280966 11 - 192294377 TGGATAGGGAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8761981 11 + 9440265 TGGAGAGGGAA i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8490848 11 + 21915920 TGGATAGGGAA i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065643 11 - 90373283 TGGATAGGGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2251053 11 + 4234846 TGGATAGGGAA i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 249177 11 - 13750039 TAGATAGGGAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21973103 11 + 50472720 TGGATAGGAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067294 11 + 13128814 TGGATAGGAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643668 11 - 14377064 TGGATAGGAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8782015 11 + 9889416 TGGATAGGAAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20785360 11 - 38779656 AAAATAGATAA i otoGar3.GL873528 C 0 C 0 s mm10.chr16 78157340 11 + 98207768 GAGATGGGTAA i mm10.chr16 C 0 N 0 s canFam3.chr31 13859397 11 + 39895921 GAGACAGGTGA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3706533 11 - 6883506 AAGTTAAGTAA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19233906 39 + 47401472 I a score=73277.000000 s hg38.chr21_KI270874v1_alt 127328 9 + 166743 AGAATTCAA s panTro5.chr21 3752950 9 + 33445071 AGAATTCAA i panTro5.chr21 C 0 C 0 s panPan2.chr21 17378749 9 + 46275980 AGAATTCAA i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318171 9 - 13858734 AGAATTCAA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501203 9 + 32716333 AGAATTCAA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456696 8 - 185818997 AGAATTC-A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280977 8 - 192294377 AGAATTC-A i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8761992 8 + 9440265 AGAATTC-A i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8490859 8 + 21915920 AGAATTC-A i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065654 8 - 90373283 AGAATTC-A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2251064 8 + 4234846 AGAATTC-A i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 249188 9 - 13750039 AGAATTCAA i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21973114 9 + 50472720 AGATTTCAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067305 9 + 13128814 AGAATTCAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643679 9 - 14377064 AGAATTCAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8782026 9 + 9889416 ACAATTCAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20785371 9 - 38779656 GGCACTCAA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13859408 9 + 39895921 AGCATTCAA i canFam3.chr31 C 0 C 0 s dasNov3.JH568778 3706544 9 - 6883506 ATCATCCAA i dasNov3.JH568778 C 0 C 0 e micMur3.chr31 19233906 39 + 47401472 I a score=3538164.000000 s hg38.chr21_KI270874v1_alt 127337 270 + 166743 AAATAAATACAAAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACATTTTCT-AATATGGATATGTTTCTAAAAA-TCAGAATATAATATTTATGGAGTCATTAGT-AAAATGCACTTG---ATTATCTAAGAATCTC-AACTGCTTGATGCTTGATCAAAAACTAGGTAGAAACTAAATCATGCCTATCAAC------AATTAAATATTTCTGAAAAGgggacttccaaaatggtagaataagaagctcagcaaatactttccc-taaaaa s panTro5.chr21 3752959 270 + 33445071 AAATAAATACAAAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACATTTTCA-AATATGGATATGTTTCTAAAAA-TCAGAATATAATATTTATGGAGTCATTAGC-AAAATGCACTTG---ATTATCTAAGCATCTC-AACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGCCTATCAAC------AATTAAATATTTCTGAACAGgggacttccaaaatggtagaataagaagctcagcaaatactttccc-taaaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17378758 270 + 46275980 AAATAAATACAAAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACATTTTCA-AACACGGATATGTTTCTAAAAA-TCAGAATATAATATTTATGGAGTCATTAGT-AAAATGCACTTG---ATTATCTAAGCATCTC-AACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGCCTATCAAC------AATTAAATATTTCTGAACAGgggacttccaaaatggtagaataagaagctcagcaaatactttccc-taaaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318180 270 - 13858734 AAATAAATACAAAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACATTTTCA-AATACGGATATGTTTCTAAAAA-TCAGAATATAATATTTATGGAGTCATTAGT-AAAATGCACTTG---ATTATCTAAGCATCTC-AACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGCCTATCAAC------AATTAAATATTTCTGAACTGgggacttccaaaatggtagaataagaagctcagcaaatactttccc-taaaaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501212 271 + 32716333 AAATAAATACAAAACATTCATTCCAATACATGAATAAA-ATTAGCCCTGTTCATGTACACTTTAG-AATATGGATATGTTTCTAAAAA-TCAGAATATAATATTTATGGAGTCATTAGT-AAAATGCACTTG---ATTATCTAAGCATCTC-AACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGCCTAACAAC------AATTAAACATTTCTGAACAGgggacttccaaaatggtagaataagaagctcagcaaatactttcccttaaaaT i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456704 270 - 185818997 AAATAAATACAGAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACTTTAG-AATACAGATATGTTTCTAAAAA-TCAGAATATAGTATTTATGGAGCCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTC-AACTGCGTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTACCAAC------AATTAAATATTTCTGAAGAGgggacttctaaaatggtagaataagaagctcaacagatactttccc-taaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162280985 270 - 192294377 AAATAAATACAGAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACTTTAG-AATACAGATATGTTTCTAAAAA-TCAGAATATAGTATTTATGGAGCCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTC-AACTGCGTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTACCAAC------AATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaagctcaacagatactttccc-taaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8762000 270 + 9440265 AAATAAATACAGAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACTTTAG-AATACAGATATGTTTCTAAAAA-TCAGAATATAGTATTTATGGAGCCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTC-AACTGTGTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTACCAAC------AATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaagctcaacagatactttccc-taaaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8490867 270 + 21915920 AAATAAATACAGAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACTTTAG-AATACAGATATGTTTCTAAAAA-TCAGAATATAGTATTTATGGAGCCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTC-AACTGCTTGATGCTTGATCAAAAACTGGGTAGAAAGTAAATCATGTCTACCAAC------AATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaagttcaacagatactttcct-taaaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065662 270 - 90373283 AAATAAATACAGAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACTTTAG-AATACAGATATGTTTCTAAAAA-TCAGAATATAGTATTTATGGAGTCATTAGT-AAAACACACTTG---ATTATCTAAGCATCTC-AACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTATCAAC------AATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaagctcaacaaatattttccc-taaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2251072 270 + 4234846 AAATAAATACAGAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACTTTAG-AATACAGATATGTTTCTAAAAA-TCAGAATATAGTATTTATGGAGCCATTAGT-AAAACACATTTG---ATTATCTAAGCATCTC-AACTGCTTGATGCTTGATCAAAAACTAGGTAGAAAGTAAATCATGTCTACCAAC------AATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaagctcaacaaatactttccc-taaaaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 249197 270 - 13750039 AAATAAATACAGAACATTCATTCCAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACTTTAG-AATACAGATATGTTTCTAAAAA-TCAGAATATAGTATTTATGGAGCCATTAGT-AAAACGCACTTG---ATTATCTAAGCATCTC-AACTGCTTGATGCTTGATCAAACACTAGGTAGAAAGTAAATCATGTCTATCAAC------AATTAAATATTTCTGAAGAGgggacttccaaaatggtagaataagaaactcaacaaatactttccc-taaaaa i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21973123 262 + 50472720 AAATAAATACAAAACATTCATTCTAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACATTAG-AATACGGATGTGTTGCTAAAAA-TCAGAA-----TATTTGTGGAGCCA-TAGT-AAAATGCACTTG---ATTATCTAAGCATCTC-AACTGCTTGACACTTGATCAAAAACTAGATAGAAAGTAAAGCATGCCTATCAAC------AATTAAATATTTCC-AGCAAG-Gacttccaaaatggtagaagaagcagctcagcaaatacattccc-ccaaaa i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067314 264 + 13128814 AAATAAATACAAAACATTTATTCTAATACATGAAGAAA-ATTAGCCCTGTTCATGTACACATTAA-AATATGGATGTGTTACTAAAAA-TCAGAA-----TATTTTTGGAGCCA-TAGT-AAAATGCACTTG---ATTATCTAAGCATCTC-AAATGCTTGATACTTGATCAAAAACTAGATAGAAAGTAAATCATGCCTATCAAC------AATTAAATATTTCTGAGCAGgagacttccaaaatggtaaaataagcagctcagcaaatactttccc-taaaaa i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643688 264 - 14377064 AAATAAATACAAAACATTTATTCTAATACATGAAGAAA-ATTAGCCCTGTTCATGTATACATTAG-AATACGGATGTGTTACTAAAAA-TCAGAA-----TATTTGTGGCGCCA-TAGT-AAAATGCACCTG---ATTATCTAAGCATCTC-AACTGCTTGATACTTGATCAAAAACTAGTTAGAAAGTAAATCATGCCTATCAAC------AAATAAATATTTCTGAGCAGgggacttccaaaatggtagaataagcagctcagcaaatactttctc-taaaaa i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8782035 265 + 9889416 AAATAAATACAAAACATTCATTCTAATACATGAAGAAA-ATTAGCCCTGTTCGCGTACACATTAG-AATATCGATGTGTTAATAAAAA-TCAGAA-----TATTTGTGCAGCCATTATT-AAAATGCACTTG---ATTATCTAAGCATCTC-AACTGCTTGACACTTGATCAAAAACTAGAGAGAAAGTAAATCATGCCTATCAAC------AATTAAATATTTCTGAGCAGgggacttccaaaatggtagaataagcagctcagcaaatactttccc-tcaaaa i aotNan1.NW_018487195v1 C 0 C 0 s micMur3.chr31 19233945 272 + 47401472 aaataaataCAAAACATTCATTCTTTAACATGAAGAAA-ATTAGCCCTGTTCATATACACCTCAA-TAAATAGACATATTTCTAAAAAATCAGAATGTAATATTTATGAAGCCATAAGT-AAAATGCACTTGTGTATTAGCTAGGCATC---AATTATTTGGCACATGACTGAAAACCAGGAAGGAAATAAATGATGCTTATCAAC------AATTAAACATTTCTGAGTAGgggacttccaaaatggtagaacaaaaagctaagaaaatgcttttcc-taaaaa i micMur3.chr31 I 39 N 0 s otoGar3.GL873528 20785380 274 - 38779656 AAATAAATACAAAACATTCATTCTAAAACATGAAGAAA-ATTAGCCCTGCTCATGTATACCTCAGTTAAGTAGACAAATTTCTAAAAACTCAGAATGTAATATTTATAAAGCCATAAGT-AAAATGCACATCTGTATTATTTAGGTATCTTACACTACACGGCATGTTACTAAAAACCAGGAAGGAAATAGAT--TGCCTATCTAC------AATTACATACTCCTGAGTAAgggaattccaaaatggtagaacaaaaagccaacaaaaagctttccc-taaaaa i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13859417 261 + 39895921 AAATAAATAGAAAACATTCATTCCAAAACATGAAGAAA-ATTAGCCCCATTCACGTATAGCTCCA-TTGACACATGTATTTCTAAAAA-CCAGGATATAATATTTATGGAGTCTTAGGTAAAAATACACTTGCTTATTATCCAGGCATCTC-AACTATTTGCTACATGACTGAAAACTAGCAAGAAAGCAAAT-ATGCTCATCAA----------TAAATATTTCAGACCAAGCgactcccaaaatggcagaacaag--------caaatgttctccc-cccaaa i canFam3.chr31 C 0 I 4 s dasNov3.JH568778 3706553 275 - 6883506 AAATAAATGCAAAACATTTATTACAAAACATTAAGAAAGATTAACCATGTTTTTTTATAACTCAG-TAT----ATACATTTCTAAAAA-TCAGAATATAATATTTATGGAGCCATATGT-AAAATACATTTATTTAttatctaagcatctt-aactacttggctcataactgaaaactaggaaggaagtaaataatacttctaaacaattaaaatTAAATAATGCAGAGCAgg-gactcccaaacttatgaggtaagaagctcaccaaatgtcccctc-caaaaa i dasNov3.JH568778 C 0 C 0 a score=14742.000000 s hg38.chr21_KI270874v1_alt 127607 1 + 166743 g s panTro5.chr21 3753229 1 + 33445071 g i panTro5.chr21 C 0 C 0 s panPan2.chr21 17379028 1 + 46275980 g i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318450 1 - 13858734 g i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501483 1 + 32716333 G i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456974 1 - 185818997 g i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162281255 1 - 192294377 g i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8762270 1 + 9440265 g i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8491137 1 + 21915920 g i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15065932 1 - 90373283 g i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2251342 1 + 4234846 g i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 249467 1 - 13750039 g i colAng1.NW_012120598v1 C 0 C 0 s calJac3.chr21 21973385 1 + 50472720 a i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067578 1 + 13128814 g i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643952 1 - 14377064 g i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8782300 1 + 9889416 g i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20785654 1 - 38779656 g i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13859682 1 + 39895921 g i canFam3.chr31 I 4 C 0 s dasNov3.JH568778 3706828 1 - 6883506 g i dasNov3.JH568778 C 0 N 0 a score=63767.000000 s hg38.chr21_KI270874v1_alt 127608 5 + 166743 tgaca s panTro5.chr21 3753230 5 + 33445071 tgaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17379029 5 + 46275980 tgaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318451 5 - 13858734 tgaca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501484 5 + 32716333 TGACA i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155456975 5 - 185818997 tgaca i rheMac8.chr3 C 0 I 7244 s macFas5.chr3 162281256 5 - 192294377 tgaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8762271 5 + 9440265 tgaca i macNem1.NW_012019910v1 C 0 I 6932 s cerAty1.NW_012002954v1 8491138 5 + 21915920 tgaca i cerAty1.NW_012002954v1 C 0 I 8045 s chlSab2.chr2 15065933 5 - 90373283 tgaca i chlSab2.chr2 C 0 I 6798 s manLeu1.NW_012102865v1 2251343 5 + 4234846 tgaca i manLeu1.NW_012102865v1 C 0 I 6629 s colAng1.NW_012120598v1 249468 5 - 13750039 tgaca i colAng1.NW_012120598v1 C 0 I 9993 s calJac3.chr21 21973386 5 + 50472720 tgaca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067579 5 + 13128814 tgaca i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643953 5 - 14377064 tgaca i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8782301 5 + 9889416 tgaca i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20785655 5 - 38779656 caacg i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 13859683 5 + 39895921 tgata i canFam3.chr31 C 0 N 0 a score=3785.000000 s hg38.chr21_KI270874v1_alt 127613 1 + 166743 a s panTro5.chr21 3753235 1 + 33445071 a i panTro5.chr21 C 0 C 0 s panPan2.chr21 17379034 1 + 46275980 a i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318456 1 - 13858734 a i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501489 1 + 32716333 A i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162281261 1 - 192294377 g i macFas5.chr3 C 0 C 0 s calJac3.chr21 21973391 1 + 50472720 a i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067584 1 + 13128814 a i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643958 1 - 14377064 a i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 8782306 1 + 9889416 a i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20785660 1 - 38779656 a i otoGar3.GL873528 C 0 N 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8491143 8045 + 21915920 I e macNem1.NW_012019910v1 8762276 6932 + 9440265 I e manLeu1.NW_012102865v1 2251348 6629 + 4234846 I e chlSab2.chr2 15065938 6798 - 90373283 I e rheMac8.chr3 155456980 7244 - 185818997 I a score=8595.000000 s hg38.chr21_KI270874v1_alt 127614 2 + 166743 CA s panTro5.chr21 3753236 2 + 33445071 ca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17379035 2 + 46275980 ca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318457 2 - 13858734 CA i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501490 2 + 32716333 CA i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162281262 2 - 192294377 ca i macFas5.chr3 C 0 C 0 s calJac3.chr21 21973392 2 + 50472720 ca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 5067585 2 + 13128814 ca i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 9643959 2 - 14377064 ca i cebCap1.NW_016107322v1 C 0 N 0 s aotNan1.NW_018487195v1 8782307 2 + 9889416 ca i aotNan1.NW_018487195v1 C 0 N 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8491143 8045 + 21915920 I e macNem1.NW_012019910v1 8762276 6932 + 9440265 I e manLeu1.NW_012102865v1 2251348 6629 + 4234846 I e chlSab2.chr2 15065938 6798 - 90373283 I e rheMac8.chr3 155456980 7244 - 185818997 I a score=31199.000000 s hg38.chr21_KI270874v1_alt 127616 23 + 166743 ggggtggagccaagatggctgaa s panTro5.chr21 3753238 23 + 33445071 ggggtggagacaagatggctgaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17379037 23 + 46275980 ggggtggagacaagatggctgaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318459 23 - 13858734 ggggtggagacaagatggctgaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501492 23 + 32716333 ggggtagagccaagatggctgaa i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162281264 21 - 192294377 aagctgaag--aaaatggtcaaa i macFas5.chr3 C 0 I 7122 s calJac3.chr21 21973394 21 + 50472720 aagctaaag--aaaatggtcaaa i calJac3.chr21 C 0 N 0 s saiBol1.JH378168 5067587 21 + 13128814 aagctaaag--aaaatggtcaaa i saiBol1.JH378168 C 0 N 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8491143 8045 + 21915920 I e macNem1.NW_012019910v1 8762276 6932 + 9440265 I e manLeu1.NW_012102865v1 2251348 6629 + 4234846 I e chlSab2.chr2 15065938 6798 - 90373283 I e rheMac8.chr3 155456980 7244 - 185818997 I a score=538937.000000 s hg38.chr21_KI270874v1_alt 127639 608 + 166743 taggaatagctccagtctatagctcccagtgtgagcgacacagaagatgggtgatttctgcatttccaactgaggtactgggttcatctcactggggagtgtcagacagtgggtgcaggacaatggaagcagtgcactgagtgtgagccaaagcagggcaaggcatcacctcacccgggaagcacaaggggtcagagaattccctttcctagtcaaagaaaggggtgacagatggcacctggaaaatcaggtcactcccaccctaataccgcacctttccaatggtcttagcaaatggcacaccaggagattatatcccacgcatggcttggagggtcctatgcccatggagcctcactcattgctagcacagcaggctgagatcaaactgcaaggtggcagtgaggctgggggaggggagcccaccattgctgaggcttgagtaagtaaacaaagtggctggaaagctcgaactgggtggagcccaccgcagctcaagcaggcctgcctgcctctgtagactccacctctgggggcagggcatagccaaacaaaaggcagcagaaacctctgcagaccttaatgtccctgtctgacagctttgaaga s panTro5.chr21 3753261 608 + 33445071 taggaatagctccagtctatagctcccagcgtgagcgacacagaagatgggtgatttctgcatttccaactgaggtactgggttcatctcactggggagtgtcagacagtgggtgaaggacagtggaagcagtgcactgagtgtgagccaaagcagggcaaggcatcgcctcacccaggaagcacaaggggtcagagaattcccattcctagtcaaagaaaggggtgacagatggcacctggaaaatcaggtcactcccaccctaataccgcacctttccaatggtcttagcaaatggcacaccaggagattatatcccatgcatggcttggagggtcctatgcccatggagcctcactcattgctagcacagcaggctgagatcaaactgcaaggtggcagtgaggctgggggaggggagcccaccattgctgaggcttgagtaagtaaacaaagtggctggaaacctcgaactgggtgaagcccaccgcagctcaagcaggcctgcctgcctctgtagactccacctctgggggcagggcatagccaaacaaaaggcagcagaaacttctgcagaccttaatgtccctgtctgacagctttgaaga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17379060 608 + 46275980 taggaatagctccagtctatagctcccagcgtgagcgacacagaagatgggtgatttctgcatttccaactgaggtactgggttcatctcactggggagtgtcagacagtgggtgaaggacagtggaagcagtgcactgagtgtaagccaaagcagggcaaggcatcgcctcacccaggaagcacaaggggtcagagaattccctttcctagtcaaagaaaggggtgacagatggcacctggaaaatcaggtcactcccaccctaatactgcacctttccaatggtcttagcaaatggcacaccaggagattatatcccatgcatggcttggagggtcctatgcccatggagcctcactcattgctagcacagcaggctgagatcaaactgcaaggtggcagtgaggctgggggaggggagcccaccattgctgaggcttgagtaagtaaacaaagtggctggaaacctcgaactgggtgaagcccaccgcagctcaagcaggcctgcctgcctctgtagactccacctctgggggcagggcatagccaaacaaaaggcagcagaaacttctgcagaccttaatgtccctgtctgacagctttgaaga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3318482 607 - 13858734 taggaatagctccagtctatagccccgagcgtgagcaacacagaagatgggtgatttctgcatttccaactgaggtactgggttcatctcactggggactgtcagacagtgggtgcaggacagtggaagcggtgcactgagtgtgagccaaagcagggcaaggcatcgcctcacgcaggaagcacaaggggtcagagaattccctttcctagtcaaagaaaggggtgacagatggcacctggaaaatcaggtcactcccaccctactaccgcacctttccaatggtcttagcaaatggcacaccaggagattatatcccatgcatggcttggagggtcctatgcccatggagcctcactcattgctagcacagcaggctgagatcaaactgcaaggtggcagtgaggctgggggaggggagcccaccattgctgaggcttgagtaagtaaacaaagtggctggaaacctcgaactgggtgaagcccactgcagctcaagcaggcctgcctgcctctgtagactccacctct-ggggcagggcatagccaaccaaatggcagcagaaacttctgcagaccttaatgtccctgtctgacagctttgaaga i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4501515 607 + 32716333 taggaacagctccagtctatagctcccagtgtgagtgacacagaagatgggtgatttctgcatttccaactgaggtactgggttcatctcactggggagtgtcagacagtgggtgcaggagagtgggtgcagtgcactaagcatgagccaaagcagggcgaggcatcgcctcacctgggaagcacaaggggtcagggaattccctttcctagtcaaagaaaggggtgacagatggcacctggaatgtccggtccctcccaccctaataccgcacctttccaatggtcttagcaaacagcacaccaggagattacatcccacacctggctcagagggtcctacacccatggagcctcactcattgctagcacagca-gctgagattaaactgcaaggtggcagccaggctgggggaggggagcccaccattgctgaggcttgagtaaataaacaaagcgaccgggaagctcgaactgggtggagcccactgcagctcaaggaggcctgcctgcctctgtagactccacctctgggggcagggcatagtcaaagaaaaggcagcagaaacctctgcagacttaaatgtccctgcctgacagctttgaaga i nomLeu3.chr25 C 0 I 12816 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8491143 8045 + 21915920 I e macNem1.NW_012019910v1 8762276 6932 + 9440265 I e manLeu1.NW_012102865v1 2251348 6629 + 4234846 I e chlSab2.chr2 15065938 6798 - 90373283 I e macFas5.chr3 162281285 7122 - 192294377 I e rheMac8.chr3 155456980 7244 - 185818997 I a score=2828260.000000 s hg38.chr21_KI270874v1_alt 128247 5241 + 166743 gagtagtggttctcccagcacacagctggagatctgagaatggacagactgcctcctcaagtgggtccctgacccccaagtagcctaactgggaggcatcccccagtaggggcagactgacacctcacacggccaggtactcctctgagacaaaactgccagaggaacgatcaggcagcaacatttgctgctcagcaatatccactgttctgcaccctctgctgctgatacccaggcaaacagggtctggagtgtacctccagcaaactccaacagacctgcaactgagggtcatgactgttagaaggaaaactaacaaacagaaagaacatccacaccaaaaccccatctgtacatcaccattatcaaagaccaaaggtagataaaaccacaaagatggggaaaaaacagagtagaaaaactggaaactctaaaaatcagagtgcctctcctcctccaaaggaatgcagcacctcaccagcaatggaacaaagctgtacggagaatgacattgacgagttgagagaagaaggcttcagacgatcaaactactctgagctaaaggaggaagtttgaacccatggcaaagaagttaaaaaccttgaaaaaaaattagatgaatggctaactagaatcaccaatgcacagaagtccttaaaggacctgatggagctgaaaaccaagacacaa----------------gcacaagcctcagtagccgattcaatcaactggaagaaagagtatcagtgatggaagatcaaatcaatgaaatgaagcaagaagagaagtttagagaacaaagaataaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacagggagcatggaaccaagttgggaaacactcttcaggatattatccaggagaacttccccaatctagcatcgtggccaacattcaaattcaggaaatatggtgaacaccacaaagatacttcttgagaagagcaactccaagacacataattgtcagattcaacatatttgaaatgaagaaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatcagactaacagcttatctctcagcagaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcaccaccaggcctgctctaaaagaaaagttttagaaggaagcactggaatttcatgtccagccaaactaagcttcataagtgaaagggaaataaaatcctttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagaaaagttcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccactgcaaaaacatgccaaattttaaagaccatcaagactaggaagaaactgcatcaaccaatgagcaaaataaccagctaacatcataatgacaggatcaaattcacatataacaatattaactttaaatgtaaatgggctaaatgccccagttgaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaacccatctcatgtgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaggcaaatggaaaacaaaaaatgcaggggttgcatatcctagtctgataaaacagacatcaaaccaacaaagatcaaaagagacaaagaaggccattaaataacggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagtacccagattcataaagcaagtccttagagaccgacaaagaggcttagactcccacacaataataatgggagactttaacaccccactgtcaacattagacagatcaacaagagagaaagttaacaaggatatccaggaattgaactcagctctgcaccaagcggacctaatagacatgtacagaactctccaccccaaatcaacagaatatacattcttctcagcaccacactgcacttatcctccaaaattgaccacatagttggaagtaaagaactcctcggcaaatgtaaaagaacagaaattataacaaactgcctctcagaccacaatgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaaaaacctgctccttaatcactactgggtacacaacgaaatgaaggcagaaataaagatgttcttcaaaaccaacaagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagagaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagagacacaaaaacccttcaaaaaatcgaagaatccaggagctggtttttcggaaagatcaacaaaattgctagactgctagcacgactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaatgataaagtggatcttaccaccaatcccacagaaatacaaactaccatcagagaacactataaacacctctatgcaaataaactagaaaatctggaagaaatggataaattcctggaaacatacaccctctcaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggtaataattaatagcttatcaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccagaggcacaagaaggagctagtaccattccttctgaaactattgcaatcaatagaaaaagaggaaatcctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaataaaaaaatagaattttagaccaatatccctgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaagaagcttatccaccatgatcaagtgggcttcatccctggaatggaaggctggttcaacacatgcaaatcaataaatgtgatccagcagataaacggaaccaatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataaattaggtattgatgggatgtatcacaaaataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaaacattccctttgaaaactggcacaagacaggggtgccctctctcaccactcctattcaacatagtgttggaagttctggtcagggcaatcaggcaggagaagg-aaaaaaagtattcaattaggaaaaggggaagtcaaattgtccctgtttgcagatgacataattgtatatctagaaaatcccattgtctcagcccaaaatctccttaagctgatagacaacatcagcaaagtctcaggatacaaaatcaatgtgcaaagatcacaagcattcttatacacaaataacagacaaacagagagccaaatcatgagtaaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttccaagggatgtgaaggaccccttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaaaaataaatatcatgaaaatgaccatacttaccaaggtaatttacagattcaatgccatccccatcaagctaccaatgattttcttcacagaattggaaaaaactacttaaaagttcatatggaacc-aaaaaagagccctcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctacagtaaacaaaacagcatggtactggtaccaaaacagagatatagactaatggaacagaacagaggcctcagaaataatgccacatatctacaactatctgatctttgacaaacctgacaaaaagaagaaatggggaaagtattccctatttaataaattgtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacgccttatacaaaaattaattcaagatggattaaagacttacatgttacacctaaaatcataaaaatcctagaagaaaatctaggcaataccattcaggacataggcatgggcaagtacttcatgtctaagacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaataaacaatcccatcaaaaagtgggtgaaggatatgaacagacattcctcaaaagaagacatttgtgcagccaaaagacacctgaaaaaatattcatcatcactggccatcagagaaatgcaaatcaaaatcacaatgagataccatctcacaccagttagaatggcgatctttaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagtgtggcaattcctcagggatctagaactagaaataccatttgacccagccatctcattactgggtatatacccgaaggattataaatcatgctgctatagagacacatgcacacgtaggtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgtccaacgatgatagactggatt s panTro5.chr21 3753869 5245 + 33445071 gagtagtggttcttccagcatgcacctggagatctgagaatggacagactgcctcctcaagtgggtccctgacccccgagtagcctaactgggaggcatcccccagtaggggcagactgacacctcaaacggccaggtactcctctgagacaaaactgccagaggaacgatcaggcagcaacatttgctgctcagcaatatccgctgttctgcatcctctgctgctgatacccaggcaaacagggtctggagtgtacctccagcaaactccaacagacctgcagctgagggtcctgactattagaaggaaaactaacaaacagaaagaacatccacaccaaaaccccatctgtacatcaccattatcaaagaccaaaggtagataaaaccacaaagatggggaaaaaacagagcagaaaaactggaaactctaaaaatcggagtgcctctcctcctccaaaggaatgcagcacctcaccagcaatggaacaaagctgtacggagaatgacattgacgagttgagagaagaaggcttcagacaatcaaactactctgagctaaaggtggaagttcaaacctatggcaaagaagttaaaaaccttgaaaaaaaattagatgaatggctaactagaataaccaatgcagagaagtccttaaaggacctgatggagctgaaaaccaaggcacaagaactacgtgacgaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtgatggaagatcaaatcaatgaaatgaagcaagaagagaagtttagagaacaaagaataaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggcgtacctgaaagtgacagggagaaaggaaccaagttggaaaacactcttcaggatattatccaggagaacttcgccaatctagcaacgtggccaacattcaaattcaggaaatatagagaacaccacaaagatacttcttgagaagagcaactccaagacacataattgtcagattcaacaaatttgaaatgaagaaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatcagactaacagctgatctctcagcagaaactctacaagacagaagagagtgggggccaatattcaacattcttaaagaatcttcaacccagaatttcatatccagccaaactaagcttcataaatgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcatcaccaggcctgccctaaaagaaaagttttcgaaggaagcactggaatttcatgtccagccaaactaagcttcataagtgaaagggaaataaaatcttttacagacaagcaaatgctgagagattttgtcaccaccacgcctgccctaaaagaaaagttcctgaaggaagcactaaacatggaaaggaacaactggtaccagccactgcaaaaacatgccaaattgtaaagaccatcaaggctaggaagaaactgcatcaaccaatgagcaaaataaccagctaacatcataatgaca-gatcaaattcacatataacaatattaactgtaaatgtaaatgggctaaatgccccagttgaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaacccatctcacgtgcacagacacacataggctcaaaataaaaggatggaggaagatctaccaggcaaatggaaaacaaaaaaggcaggggttgca-atcctagtgtgataaaacagacttcaaaccaacatagatcaaaagacacaaagaaggccattaaataatggtaaagggatcaattcaacaagaagagctaactatcctaaatacatatgcacccaatacaggagtacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaatcataatgggaggctttaacaccccactgtcaacatt----agatcaacaagacagaaagttaacaaggatatccaggaattgaactcaactctgcaccaagcggacctaatagacatctacagaactctccaccccaaatcaacagaatatacattcttctcagcaccacactgcaatta--ctccaaaattgaccacatagttggaagtaaagcacttctcggcaaatgtaaaagaacaaaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacacaacgaaatgaaggcagaaataaaggtgttctttgaaaccaacaagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgcgtagagggaaatttatagcactaaatgcccacaagaggaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagagacaaaaaaacccttcaaaaaatcgaagaatccaggagctggtttttcggaaagatcaacaaaattgctagactgctagcaagactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggggatctcaccaccaatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctggaagaaatggataaattcctggaaatatacaccctctcaagactaaatcaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggtaataattaatagcttatcaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccagagccacaagaaggagctagtaccattccttcggaaactattccaatgaatagaaaaagaggaaatcctccctaactcattttatgaggccaccatcatcctgataccaaagcctggcagagacac-ataaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaagaagcttatccaccacgatcaagtgggcttcatccctggaatggaagggtggttcaacacatgcaaatcaataaatgtaatccagcatataaatggaaccaatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataaattatgtattgatgggatgtatctcaaaataataagagctatctatgacaaacctacagccaatatcatactgaatggtcaaaaactggaaacattccctttgaaaacttgcacgagacaggggtgccctctctcaccactcctgttcaacatagtgttggaagttctggtcagggcaatcaggcaggagaaggcaaaaagggtattcaattaggaaaagaggaagtcaaattgtccctgtgtgcagatgacataattgtatatctaggaagtcccatcgtctcagcccaaaatctccttcagctgatagacaacttcagcaaagtctcaggatacaaaatcaatgtgcaaagatcacaagcattcttatacacaaataacag----acagagagccaaatcatgagtaaactcccattcacaattgcttcaaagagaataaaatacctacgaatccaacttacaagggatgtgaaggaccccttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaataaatatcatgaaaatgaccatacttaccaaggtaatttacagattcaatgccatccccctcaagctaccaatgattttcttcacagaattggaaaaaactacttaaaagttcatatggaaccaaaaaaagagcccgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgctactggtaccaacacagagatatagactaatggaacagaacagaggcctcagaaataatgccacatatctacaactatctgatctttgacaaacctgacaaaaagaagaaatggggaaagtattccctatttaataaatggtgctggggaaactggctaggcatacgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatggattaaagacttaaatgttagacctaaaatcataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtctaagacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctacaaggaactcaaacaaatttagaagaaataaacaatcccatcaaaaagtgggtg-aggatatgaacagacatttctcaaaagaagacatttgtgcagccaaaagacacatgaaaaaatgttcatcatcactggccatcagagaaatgcaaatcaaaatcacaatgagataccatctcacaccagttagaatggcgatctttaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggcgggactgtaaactagttcaaccattgtggaagtcagtgtggagattcctcagggatctagaactagaaataccatttgacccagccatcccactactggatagatacccaaaggattataaatcatgctgctataaagacacatgcaaatgtaggtttattgtggcagtattcccaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggatt i panTro5.chr21 C 0 I 921 s panPan2.chr21 17379668 5246 + 46275980 gagtagtggttcttccagcatgcacctggagatctgagaatggacagactgcctcctcaagtgggtccctgacccccgagtagcctaactgggaggcatcccccagtaggggcagactgacacctcaaacggccaggtactcctctgagacaaaactgccagaggaacgatcaggcagcaacatttgctgctcagcaatatccactgttctgcatcctctgctgctgatacccaggcaaacagggtctggagtgtacctccagcaaactccaacagacctgcagctgagggtcctgactattagaaggaaaactaacaaacagaaagaacatccacaccaaaaccccatctgtacatcaccattatcaaagaccaaaggtagataaaaccacaaagatggggaaaaaacagagcagaaaaactggaaactctaaaaatcggagtgcctctcctcctccaaaggaatgcagcacctcaccagcaatggaacaaagctgtacggagaatgacattgatgagttgagagaagaaggcttcagacaatcaaactactctgagctaaaggtggaagttcaaacctatggcaaagaagttaaaaaccttg-aaaaaaattagatgaatggctaactagaataaccaatgcagagaagtccttaaaggacctgatggagctgaaaaccaaggcacaagaactacgtgatgaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtgatggaagatcaaatcaatgaaatgaagcaaaaagagaagtttagagaacaaagaataaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaagtgacagggagaaaggaaccaagttggaaaacactcttcaggatattatccaggagaacttcgccaatctagcaacgtggccaacattcaaattcaggaaatatagagaacaccacaaagatacttcttgagaagagcaactccaagacacataattgtcagattcaacaaatttgaaatgaagaaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatcagactaacagctgatctctcagcagaaactctacaagacagaagagagtgggggccaatattcaacattcttaaagaatcttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcatcaccaggcctgccctaaaag-aaagttttcgaaggaagcactggaatttcatgtccagccaaactaagcttcataagtgaaagggaaataaaatcttttacagacaagcaaatgctgagagattttgtcaccaccacgcctgccctaaaagaaaagttcctgaaggaagcactaaacatggaaaggaacaactggtaccagccactgcaaaaacatgccaaattgtaaagaccatcaaggctaggaagaaactgcatcaaccaatgagcaaaataaccagctaacatcataatgaca-gatcaaattcacatataacaatattaactttaaatgtaaatgggctaaatgccccagttgaaagacacagactggcaaattggataaagagtcaagacccatcagtgtgctgtattcaggaaacccatctcacgtgcacagacacacataggctcaaaataaaaggatggaggaagatctaccaggcaaatggaaaacaaaaaaggcaggggttgca-atcctagtgtgataaaacagacttcaaaccaacatagatcaaaagacacaaagaaggccattaaataatggtaaagggatcaattcaacaagaagagctaactatcctaaatacatatgcacccaatacaggagtacccagattcataaagcaagtccttagagacctacaaagagacttagactcccacacaataataatgggagactttaacaccccactgtcaacattagacagatcaacaagacagaaagttaacaaggatatccaggaattgaactcaactctgcaccaagcggacctaatagacatctacagaactctccaacccaaatcaacagaatatacattcttctcagcaccacactgcactta--ctccaaaattgaccacatagttggaagtaaagcacttctcggcaaatgtaaaagaacaaaaattataacaaactatctctcagaccacaatgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacacaacgaaatgaaggcagaaataaaggtgttctttgaaaccaacaagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgcgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagagacacaaaaacccttcaaaaaatcaaagaatccaggagctggtttttcggaaagatcaacaaaattgctagactgctagcaagactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggggatctcatcaccaatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctggaagaaatggataaattcctggaaatatacaccctctcaagactaaatcaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggtaataattaatagcttatcaaccaaaaaaagtccaggaccagatggattcacagccgaattctaccagagccacaagaaggagctagtaccattccttcggaaactattccaatgaatagaaaaagaggaaatcctccctaactcattttatgaggccaccatcatcctgataccaaagcctggcagagacac-at-aaaaaagagaattttagaccaatattcttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaagaagcttatccaccacgatcaagtgggcttcatccctggaatggaaggctggttcaacacatgcaaatcaataaatgtaatccagcatataaatggaaccaatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataaattatgtattgatgggatgtatctcaaaataataagagctatctatgacaaacctacagccaatatcatactgaatggtcaaaaactggaaacattccctttgaaaacttgcacaagacaggggtgccctctctcaccactcctgttcaacatagtgttggaagttctggtcagggcaatcaggcaggagaaggcaaaaatggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacataattgtatatctaggaagtcccatcgtctcagcccaaaatctccttcagctgatagacaacttcagcaaagtctcaggatacaaaatcaatgtgcaaagatcacaagcattcttatacacaaataacag----acagagagccaaatcatgagtaaactcccattcacaattgcttcaaagagaataaaatacctacgaatccaacttacaagggatgtgaaggaccccttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaataaatatcatgaaaatgaccatacttaccaaggtaatttacagattcaatgccatccccctcaagctaccaatgattttcttcacagaattggaaaaaactacttaaaagttcatatggaaccaaaaaaagagcccgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgctactggtaccaacacagagatatagactaatggaacagaacagaggcctcagaaataatgccacatatctacaactatctgatctttgacaaacctgacaaaaagaagaaatggggaaagtattccctatttaataaatggtgctgggaaaactggctaggcatacgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattccagatggattaaagacttaaatgttagacctaaaatcataaaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtctaagacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctacaaggaactcaaacaaatttagaagaaataaacaatcccatcaaaaagtgggtg-aggatatgaacagacatttctcaaaagaagacatttgtgcagccaaaagacacatgaaaaaatgttcatcatcactggccatcagagaaatgcaaatcaaaatcacaatgagataccatctcacaccagttagaatggcgatctttaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggcgggactgtaaactagttcaaccattgtggaagtcagtgtggagattcctcagggatctagaactagaaataccatttgacccagccatcccactactggatagatacccaaaggattataaatcatgctgctataaagacacatgcaaatgtaggtttattgtggcagtattcccaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggatt i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3319089 5245 - 13858734 gagtagtggttctcccagcatgcacctggagatctgagaatggacagactgcctcctcaagtgggtccctgacccccgagtagcctaactgggaggcatcccccagtaggggcagactgaca-ctcaaacggccaggtactcctctgagacaaaactgccagaggaacgatcaggcagcaacatttgctgctcagcaatatccgctgttctgca-cctctgctgctgatacccaggcaaacagggtctggagtgtacctccagcaaactccaacagacctgcagctgagggtcctgactattagaaggaaaactaacaaacagaaaggacatccacaccaaaaccccatctgtacatcaccattatcaaagaccaaaggtagataaaaccacaaagatggggaaaaaacagagcagaaaaactggaaactctaaaaatcggagtgcctctcttcctccaaaggaatgcagcacctcaccagcaatggaacaaagctgtacggagaatgacattgacgagttgagagaagaaggcttcagacaatcaaactacactgagctaaaggaagaagttcgaacccatgacaaagaagttaaaaaccttgaaaaaaaattaggtgaatggctaactagaataaccaatgcagagaagtccttaaaggacctgatggagctgaaaaccaaggcataagaactacgtgatgaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtgatggaagatcaaatcaatgaaatgaagcaagaagagaagtttagagaacaaagaataaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacatctgattggtgtacctgaaagtgacagggagaatggaaccaagttggaaaacactcttcaggatattatccaggagaacttccccaatctagcaacgtggccaacattcaaattcaggaaatatagagaacgccacaaagatacttctcgagaagagcaactccaagacacataattgtcagattcaacaaattagaaatgaagaaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatcagactaacagctgatctctcagcagaaattctacaagccagaagagagtgggggccaatattcaacattcttaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctaagagattttgtcatcaccaggcctgccctaaaagaaaagttttcgaaggaagcactggaatttcatgtccagccaaactaaacttcataagtgaaagggaaataaaatccttcacagacaagcaaatgctgagagattttgtcaccaccaggcctgccct-aaagaaaagttcctgaaggaagcactaaacatggaaaggaacaactggtaccagccactgcaaaaacatgccaaattgtaaagaccatcaaggctaggaagaaactgcatcaaccaatgagtaaaataaccagctaacatcataatgaca-gatcaaattcacatataacaatattaactttaaatgtaaatgggctaaatgccccagttgaaagacacagactgggaaattggataaagagtcaagacccatcagtgtactgtattcaggaaaaccatctcacgtgcagagacacacataggctcaaaataaaaggatggaggaagatctaccaggcaaatggaaaacaaaaaaggcagaggttgca-atcctagtctgataaaacagacttcaaaccaacacagatcaaaagacacaaagaaggccattaaataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagtatccagattcataaagcaaatccttagagacctacaaagagacttagactcccacacaataatcatgggatactttaacaccccactgtcaacattagacagatcaacaagacagaaagttaacaaggatatccaggaattgaactcagctctgcaccaagcagacctaatagacatctacagaactctccaccccaaatcaacagaatatacattcttctcagcaccacactgcactta--ctccaaaattgaccacatagttggaagtaaagcactcttcggcaaatgtaaaacaaaagaaattataacaaactatctctcagaccacaatgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacacaacgaaatgaaggcagaaataaaggtgttctttgaaaccaaccagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattaaaaagctagcacaaagcaagaaataactaagatcagagcagaactgaaggagatagagacacaaaaacccttcaaaaaatcgaagaatccaggagctggtttttcggaaagatcaacaaaattgctagactgctagcaagactaataaagaagaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggggatctcaccaccaatcccacagaaatacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctggaagaaatggataaattcctggaaatatacaccctctcaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgaggtaataattaatagcttatcaacc-aaaaaagtccaggaccagatggattcacagccgaattctactagaggcacaagaaggagctagtaccattccttctgaaactattctaatcaatagaaaaagaggaaatcctccctaactcattttatgaggccaccatcatcctgataccaaagcctggcagagacac-at-aaaaaagagaattttagaccaatatccctaatgaacattgatgcaaaaatcctcaataaaatactggcaaaatgaatccagcagcacatcaagaagcttatccaccatgatcaagtgggcttcatccctggaatggaaggctggttcaacacatgcaaatcaataaatgtaatccagcatataaatggaaccaatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaatgcttcatgctaaaaactctcaataaattaggtactgatgggatgtatctcaaaataataagagctatctatgacaaacccacagccaatatcatactgaatggtcaaaaactggaaacattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtattggaagttctggtcagggcaatcaggcagaagaaggaaaaaaaggtattcaattaggaaaagaggaagtctaattgtccctgtttgcagatgacataattgtatatctaggaagtcccatcgtctcagcccaaaatctccttcagctgatagacaacttcaacaaagtctcaggatacaaaatcaatgttcaaagatcacaagcattcttatacacaaataacagacaaacagagagccaaatcatgagtaaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt-caagggatgtgaaggaccccttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaataaatatcatgaaaatgaccatacttaccaaggtaatttacagattcaatgccatccccctcaagctaccaatgattttcttcacagaattggaaaaaactacttaaaagttcatatggaacc-aaaaaagagcccgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagactaatggaacagaacagaggcctcagaaataatgccacatatctacaactatctgatctttgacaaacctgacaaaaagaagaaatggggaaagtattccctatttaataaatggtgctggg-aaactgtctagccatacgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaatcataaaaaccctagaagaaaacttaggcaataccattcaagacataggcatgggcaaggacttcatgtctaagacaccaaaagcaatggcaacaaaagccaaaattgtcaaatgggatctaattaaactaaagatcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctacaaggaactcaaacaaatttagaagaaataaacaatcccatcaaaaagtgggtg-aggatatgaacagacacttctcaaaagaagatatttgtgcagccaaaagacacatgaaaaaatgttcttcatcactggccatcagagaaatgcaaatcaaaatcacaatgagataccatctcacaccagttagaatggcaatctttaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttctaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggattataaatcatgctgctataaagacacatgcacatgtaggtttactgtggcagtattcccaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggatt i gorGor5.CYUI01015003v1 C 0 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8491143 8045 + 21915920 I e macNem1.NW_012019910v1 8762276 6932 + 9440265 I e manLeu1.NW_012102865v1 2251348 6629 + 4234846 I e chlSab2.chr2 15065938 6798 - 90373283 I e macFas5.chr3 162281285 7122 - 192294377 I e rheMac8.chr3 155456980 7244 - 185818997 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=6768.000000 s hg38.chr21_KI270874v1_alt 133488 12 + 166743 aagaaaatgtgg s panTro5.chr21 3760035 12 + 33445071 aagaaaatgtgg i panTro5.chr21 I 921 C 0 s panPan2.chr21 17384914 12 + 46275980 aagaaaatgtgg i panPan2.chr21 C 0 I 513 s gorGor5.CYUI01015003v1 3324334 12 - 13858734 aagaaaatgtgg i gorGor5.CYUI01015003v1 C 0 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8491143 8045 + 21915920 I e macNem1.NW_012019910v1 8762276 6932 + 9440265 I e manLeu1.NW_012102865v1 2251348 6629 + 4234846 I e chlSab2.chr2 15065938 6798 - 90373283 I e macFas5.chr3 162281285 7122 - 192294377 I e rheMac8.chr3 155456980 7244 - 185818997 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=3611021.000000 s hg38.chr21_KI270874v1_alt 133500 6737 + 166743 cacatacacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatgggtgaagctggaaaccatcattctcagcaaactatcgcaacgacaaaaaaccaaacaccacatgttctcactcataggtgggaattgaacaatgagaacacgtggacacaggaaggggaacatcacacagcaggacctgttgtggggtggggggagggggaagggatagcattaggagatatacctaatgttaaatgaggagttaatggatgcagcacaccagcatggcacatgtatacatatgtaacaaacctgcacattgtgcaaatgtaccctataacttaaagtataatTTTTaaaaagtgaccacaaatctaaagaaaattgtcaaaaacaactatttgaagactccataaattgtccaaaatcatgcaacaaattgagatgaatttattcaggaaaagcctccaggaaggacagtgggagtctggggcatttatatcgggagctgctcccttcccccactaccttccagctttgttagcatggtagatacttgaaggtaggacaagctgtgaaaaatagcagctttgctgttggaggggggatcacttagtttgaagtggagcaccaagcaactctatgtccgggggcattattgaaaatagtcgcaatctctgtggcaaacaaatagggaaggtcaaccacatagctatcctaagcttgaggtcctagccagagcaagcaacaaagtggcaaactagctagaaaatgaacaagaagagtggggaatgagatgatattattgggacttgataagttcctctctgtctctggaaatttggaaggctgcacagatgcacatgtgtaggagaaaccagaaagggccctagccatccattcatccctgactgaatatgaaatcttgtgaatgcacagaagaaatgtgagaggtcctaaaagaaagcaaaagctgaaactgacttgtgaactgcctgaattttgaatatgttcccaaacatacagtcaagtcaatgcaaagagggtgaaaatattactgggtcaaggtagttgagcatgtttcctgaacaatcattggctaaccactaagctatgctgtcacaagggtgaacccctaagaggctaccgttaagaatgctaaaaagattattt---aaaaaaaaaaagaaaagaaaaactgagtagaaacatcagagaatgcattctgtcaaaaaaaagaaaaagaaaaaagaaagaaagaaagaaagaaaacgaaaaaagactccacatgtttggtcctggaaaattactaaacacagacaccagcaacaacaatctacaacaacaa--aaaaaatcagaatccagagttgcaacaatacattatgtgtaactagacatatgcctagttataagaacaaaaaaaatacagacatgtaaagaaacaagaaaaggtgccccaaacaaatggggtgaaaaggcagtcaGGAagagaggcagagtaagatggcagaatagaaagttccaccaactgttcccccataaggacaccaatttaactatcgacacagaaggaaaaaaa-tacctttataagaaccaaaaatcaggtgagccctcatagtacttggttttaactatgtaatgatgaaaaacacactgaagagacagaaaaaacaatcttgaatctccaatgccagccccccacaccacaaccctgggagcagtggcatggtgcagacagcatctctgggtgctggggaagcacagcaattgtgaggcattggcctcagtgctgtcctgttagagcagaaagggaaactggaccaaactcagctgacactcacccaggaagggaacatttaaccagcactagccagagaggaattgccaatcccagcggtcccaatttgagttcctgcaaaccttggcacttaaggccaaagtgctctgtgtctccaaataaacttgaaaggtagcctaggccataaggactgaaagtcttaggtgagttctagggcttaactgggcccagaagacgatggactttgggggcacatgacgtactgagacatcagctgggacagccaagagagcgttgacatcaccccttctctaaccccaggatgcacagctcacagctcgaaaatagtccccatccttccacttgaagagaagagaggaagagtgtgggtgactttgtcttgcattttggatgctagctcagccacagcaggatggggcactagttagagttgtaagtcctttgatacaggccttagctcccagaccacatttctagacacggcctgagccagaaaataaatcctctgccttgaagtcaagaaacaagtcctgacaacatttatcacctaactgaagaaccgttgggccctgaacaaccagatctacacccagatact--gtcaagggccttgggtgagcctctgaggcttactggctttaggtgagattcaacatattaccagcagtggtggtgaagggatgaaattccttctacttgagaaaagcagaggaaaaagtaaaggagactttgtcttgcacctcaggtactaactcaaccacggcagggtagagcaccaagcaggctcctgggggtgtgggggggggggggtccccgatttcagcactggattctcggacagcatctctggacctgccctgggctggaggggagcttcctgccctaaaggttgagtcccaggccagggaaaattcacaataagctgacttaacccttgagctttaaggaaatatcagtggtgtctggcagaatgcttgatgggactgtggtgggagaggcttctctgcctttgggaaaaaaagggaagagtgggaagcactgtgtcttgtggtttgagtgccaccttaggtgcagtacaatagaacaccaggtagacttctaagctttttgcctctagaccccaactccaaggtggcatctctggacccaccttaggcctggggaaagtcaccacctttaatggaagaacagatgcctggctgactctgccacctgctgattgtataaccccagaaccttgagcaaacaaaggcagtacacaggaaatggatacaggtggccttgggggagaaccagtgttgtgctggcttcaggtctgactcagtgcagtcatagtgatggtggcttgtgtcattccatctccagctttagacggctcagaacagggagacatactctgttaggaagaaagggaagagaataggagtctctgcctggtaatccagagaatcctgctgaatcttgtataagaccattaaagcaatatctctatgagtctgcaagaactacagcattactggcttggaatgcccccataaaacagataaagtttagatcataacacccaagtcctttcaaatattttgaaaacctgcccaataaggaagggtacaaacaattccagactgagaagactacaatgaatacataactcttcaatactcagacacagagaaacctctgcaggtatcaaggcattccaggaaagcatgacatcaccaaatgaactaaataagtcaccaggaatgaatactggagaaacagagatatgtgaccttttagacacaggattcataatggcctttttaaggacactcaaataaattcaagataacacaaagaaggaattaagaattctatcagaaaaatttaacagagattaaaataatttgaaagaatcaagcagaagttctggagctgaaaaatgcaattggcacactgaagaatgtactagagtcctttagtagcagaattgatcaagcagaaagaagaattagtgagcctgaagacaatttatttgaaaacacacag----gggagaaaaaa-ggaaaaaagaatgaacaataaagcacacctacaggaaggaaagaaagaagaatacaccacaaaaaaaccagaaaacacatttaaaaaatggcagaagtaagtccttacttatcaataataacattgaatgtaagtggattaaatcctttaatcaaaagacatagactgaatgaaaaaaaagactgaatgaatgaaaaaacaagacccattgatctgttgccatcaagaaatacatttcacccatcaagacacacatagactaaaaataaagggatggaaaaagatatttcatagctaaaaaaaa-gaacatgagtagctataattatcttagataaaatagattttgagacaaaa-ctataagagaaaaatgtcactatacaataataaagtggcaaattcaacaagagaatataacaactttaaatatatatgtacccaacattagagaacctatatgtataaagaaaatattattagagctaaagagagatgggccccaatacaataatagctggagatttcaacactccactttcagcattgaacagatcttccagatacaaaatcaacaaagaaacgtcatactcagtcttcactaaagaccaaatgggtctaatagatatttacagaacatttcattcagtggctgcagaatacacattttttctcagcacatgaattattctcaaaaaacaggccatatgttaggtcacaaaacaaggtttaaaactcacaatgaaataaaattagaaattgataacaagaggaattttggaaactgtacaaatacatggatataaaccaatgcattcctgaatgtccagtgaatcaataaagaaatcaagaaagaaactaaaaaatgtcttgaaacagatgataatggaaacacaacatcctaaacctatgatcagggatacagcaaaagcaatattaagactctgtcttttgtaaatagcccagtcttgagtatgtttttattagcagaatgaaaatggactaatacagtgaattgctgctggtagagtggggcattgctaaaaaggtacccaaaaatgtagaagcaaatttggaacttggtaacaggaagaggttggaacagtttggatggctcagaagaagactggaaaatgtgggaaagtttggaacttcctacagacttgttgaatggctttgcccaaaatgctgatagtgatatggacaataaaatccaggctgaggtggtcccagatgaacaagaggaatttgttggaaactggagcaaaagtgactcatgttacagcaaagagactggtggcattttgctcctaccctagagatttgagaaactttgaacttgagagaaatgattttgggtatctggtagaagaaatgtctaagcagaaaagcatttaagaggtgacttgggtgctgttaaaggcattcagctttgtaagggaagcagagcatataagttcagaaaatttacagcctgacaatgtgatagaaaaaaaaa-gtcctattttctgaggcgaaattcaagccagctgcagatatttgcataagtaatgagaatctgaacgttaattcccaagacaatgggg-aaaatgtctccagggcatatcagaggtcttcacagcagccctggaagccaaggaagaaaagatgacttcatggaccaggctaagagtcccagtgctgggtgcagtctagggacttggtgccctgcatcccagctgctccagctgtgactaaaaggggccaagctacagttcaggccatggctttagagggttgaagccccatctattggcagcttgcacatggtgttgagtctgtgggtgcacaggagtcgagaattaaggtttggaaacctccacctatatttcaggagatgtatggaaatgcctggatgcccaggcaaaagtttgctgcagggatggggtgctcatgggggacctctgctagggcagagcagaagggaaatgtggggatgaagccccccacacagagtccccattggggcactgcctagtggagctgtgagaagaggtccaacatccttcagaccccagaatggtagatccacctacagtttgGtagaccaagcagaagaaaagatatcagagcttgaatactaccttgatgagataaggcaggcagagaagattagaggaaaaagaaagaaaaggagcaaacaaaactgctgagaactatcagattatgttacaggatggaacctacaactaataggggtacctaaaagagatggagaaaacagaaccaagttggaaacacactttagagtcatccaggagaacttccccaacctagcaagacaggccaacattcaaattcaggaaatccagagaacctcagtaagatacaccatgagaaaatcaatctcaagacacacaatcatcagattctctaaggtcaaaatgggaaaaaaaaaaaaaaaaaagcagttacgtgcagccagagagaaaggccaggtcacttataaatggaaccccatcagactaacagcaaaattcccacaagccaaaagggattggaggccaatattcaacattcttaaagaaaagaatttccagcctagaatttcatgtctggtctaagtttcataagcaaaggagaaataaaatcttttttagacaagcaaatgctgaggaaatttattaacaccaggactgcctggctcctgaaggaagcattaaatatggaaaagaaaaatctttaccagccactacaacaacacactgaggtacacaaactaatgatactatgaagcaactacagaaacaagtctgcaaaataaccagctagcatcatgacgacaggttccaactcacacataacaatatttaccttaaatgtaaatcggcaaaatgccc s panTro5.chr21 3760047 6701 + 33445071 cacatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatgggtgaagttggaaaccatcattctcagcaaactatcgcaaggacaaaaaacaaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacacaccggggcctgttgtggggtggggatagtggggagggatagcattaggagatatacctaatgttaaatgacgagttaatgggtgtagcacaccaacatggcacatgtatacatatgtaacaaa-------------------------ATAACTTAAAGTATAATTTTTTaaaagtgaccacaaatctaaagaaaatggtcaaaaacaactatttgaagactccataaattgtccaaaatcatgcaacaaattgagatgtatttattcaggaaaagcctccaggaaggacagtgggagtctggggcatttatatcgggagctgctcccttcccctactaccttccagctttgttagcatggtagatacttgaaggtaggacaagctgcgaaaaatagcagctttgctgttggagggaggatcacttagtttgaagtggtgcactaaacagctctatgtccaggggcattattgaaaatagtcgcaatctctgtggcaaacaaatagggaaggtcaacgacatagctatcctaagcatgaggtcctagccagagcaagcaacaaagtggcaaactagctagaaaatgaacaagaagattggggaatgagatgatagtactgggacttgataagttcctctctgtctctcgaaatttggaaggctgcacagatgcacatgtataggagaaaccagaaagggccctagccatccactcatccctgactgaatatgaaatcttgtgaatgcacagaagaaatgtgagaggtcctgaaagaaagcaaaagctgaaactgacttgtgaactgcctgaattttgaatatgttcccaaacatacagtcaagtcaatgcaaagagggtgaaaatattactgggtcaaggtagttgagcatgttttctgaacaatcattagctaaccactaagctatgctgtcacaagggtgaacccctaagaggctaccgttaagaatgctaaaaagattattt---aaaaaaaaaaagaaaaggaaaactgagtagaaacattagagaatgcattctgtcaaaaaaa-gaaaaagaaaaaagaacgaaagaaa--------atgaaaaaagactccacatgtttggtcctggcaaattactaaacacagacaccagcaacaacaatctacaacaacaacaaaaaaatcagaatccagagttggaacaatacattatgtgtaactagacatatgcctagttataagaacaaaaaaa-tacagacatgtaaagaaacaagaaaaggtgccccaagcaaatgggatgaaaaggcagtcaGGAagagaggcagagtaagatggcagaatagaaagttccaccaactcttccctcataaggacaccaatttaactatcgacacagaagaaaaaaaaatacctttataagaaccaaaaatcaggtgagccctcatagtacttggttttaactatgtattgatgaaaaacacactgaagagacagaaaaaacaatcttgaatctccaatgccagcccccaacac---aaccctgggagcagtggcatggtgcagacagcatctctgggtgctggggaagcacagcaattgtgaggcattgacctcagtgctgtcctgttatagcagaaagggaaactggaccaaactcagctgacactcacccaggaagggaacatttaaccagccctagccagagaggaattgctgatcccagcggtcccaacttgagttcccgcaaaccttggcacttaaggccaaagtgctctgtgtctccaaataaacttgaaaggtagcctaggccataaggactgaaagtcttaggtgagtcctagggcttaactgggcccagaagacgatggactttgggggcacatgacatactgagacattagctgggacagccaagagagtgttgacatcaccccttctctaaccccaggatgcagagctcacagcttgaaaatagttcccatccttccacttgaagagaagagaggaagagtgtggatgactttgtcttgcattttggatactagctcagccacagcaggatggggcactagttagagttgtaagtccttcaatacaggccttagctcccagaccacatttctagacatggcctgagccagaaaataaatcctctgccttgaagtcaagaaacaagtcctgacaacatttatcacctaactgaagaatggttgggccctgaacaaccagatctacacccagatactatgtcaagggccttgggtgagcctctgaggcttactggcttcaggtgagattcaacatattaccagcagtggtggtgaagggatgaaattccttctacttgagaaaagcagaggaaaaagtaaaggagactttgtcttgcacctcaggtactaactcaaccacggcagggtagagcaccaagcaggctcctgggca-------ggggggaggtccccgatttcagcactggattcttggacagcatctctggacctgccctgggctggaggggagcttcctgccctaaaggttgagtcccaggccagggaaaattcacaataagctgacttaacccttgagctttaaggaaatatcagtggtgtctggcagaatgcttgatgggactgtggtgggagaggcttctctgcctttgggaaaataagggaagagtgggaagcactgtgtcttgtggtttgagtgccagctcaggtgcagtacaatagaacaccaggtagacttctaaggtttttgcctctagaccccaactccaaggtggcatctctggacccaccttaggcctggggaaagtcaccatctttaatggaagaacacatggctggctgactctgccacctgctgattgtataaccccagaaccttgagcaaacaaaggcagtacacaggaaatggatacagcaggctttgggggagaaccagtgttgtgctggcttcaggtctgactcagtgcagtcatagtgatggtggcttgtgtcattccatctccagctttagaaggctcagaacagggagacatactctgttaggaagaaagggaagagaataagagtctctgcctggtaatccagagaatcctgctgaatcttgtataagaccattaaagcaatacctctatgagtctgcaagaactacagcattactggcttggaatgaccccataaaacagataaagtttagatcataacacccaagtcctttcaaatattttgaaaacctgcccaataaggaagggtacaaacaattccagactgagaagactacaatgaatacataactcttcaatgcccagacacagagaaacctctgcaggtatcaaggcattccaggaaagcatgacatcaccagatgaactaaataagtcaccaggaacgaatactggagaaacagagatatgtgaccttttagacacaggattcataatggccgttttaaggacactcaaataaattcaagataacacaaagaaggaattaagaattctattagaaaaatttaacagagattaaaataatttgaaggaattaagaagaagttctggagctgaaaaatgcaattggcacactgaagaatgcactagagtcctttagtagcagaattgatcaagcagaaagaagaattagtgagcttgaagacagtttatttgaaaacacacagtcaggggagaaaaaaaggaaaaaagaatgaacaataaagcacacctacaggaaggaaagaaagaagaatacaccatgaaaaaaccagaaagcacatttaaaaaatggcaggagtaagtccttacttatcaataataacattgaatgtaagtggattaaatcctttaatcaaaagacatagacggaatgaaaaaaa-gactgaatgaatgaaaaagcaagacccattgatctgttgccatcaagaaatacatttcacccatgaagacacacatagactgaaaataaagggatggaaaaagatacttcatagctaaaaaaaaagaacatgagtagctataattatattagataaaatagattttgagacaaaaactataagagaaaaatgtcactatacaataataaagtggcaaattcaacaagagaatataacaactttaaatatatatgtacccaacattacagcacctagatgtataaagaaaatactattagagctaaagagagatgggccccaatacactaatagctggagatttcaacactccactttcagcattgaacagatcttccagatacaaaatcaacaaagaaacgtcatactcagtcttcactaaagaccaaatgggtctaatagatatttacagaacatttcattcagtggctgcagaatacacattttttctcagcacaagaattattctcaaaaaacaggccatacattagatcacaaaacaaggtttaaaactcacaatgaaataaaattagaaattgaaaacaagaggaattttggaaactgtacaaatacatgggtacaaaccaatgcattcctgaatgtccagtgaatcaacaaagaaatgaagaaagaaactaaaaaatgtcttgaaacagatgataatggaaaaacaacatcctaaacctatgattagggttacagcaaaagcaatattaagactctgtcttttgtaaatagcccagtcttgagtatgtctttattagcagaatgaaaatggactaatacagtgaattgctgctggtagagtggggcattgctaaaaaggtacccaaaaatgtagaagcaaatttggaacttggtaacaggaagaggttggaacagtttgggtggctcagaagaagactggaaaatgtgggaaagtttggaacttcctacagacttgttgaatggctttgcccaaaatgctgatagtgatatggacaataaaatccaggcagaggtggtcccagatgaacaagaggaatttgttggaaactggagcaaaagtgacttatgttatagcaaagagactggtggcattttgctcctgccctagagatttgagaaactttgaacttgagagaaatgattttgggtatctggtagaagaaatttctaagcagaaaagcattcaagaggtgacttgagtgctgttaaaggcattcagctttgtaagggaagcagagcatataagttcagaaaatttgcagcctgacaatgtgatagaaaaaaaaaagtcccattttctgaggagaaattcaagccagctgcagatatttgcataagtaatgagaagctgaatgttaattcccaagacaatgggg-aaaatgtctccagggcatatcagaggtcttcacagcagccctggaagccaaggaagaaaagatgacttcatggaccaggctaagagtcccaatgctgggtgcagtctacggacttggtgccctgcatcccagctgctccagctgtgactaaaaggggccaagctacagttcaggccatggcttcagagggttgaagccccatctattggcagcttgcacatggtgttgagcctgtgggtgcacaggagtcgagaattaaggtttggaaacctccacctatatttcaggagatgtatggaaatgcctggatgcccaggcaaaagtt-gctgcaggggtggggtgctcttgggggacctctgctagggcagtgcagaagggaaatgtggggatgaagccccccacacagagtccccattggggcactgcctagtggagctgtgagaagaggtccaacatccttcagaccccagaatggtagatccacctacagtttgGtagaccaagcagaagaaaagatatcagagcttgaatactatcttgatgaaataaggcaggcagacaagattagaggaaaaagaaagaaaaggagcaaacaaaactgctgagaactatgagattatgttacaggatggaacttacaactaataggggtatgtaaaagagatggagaaaacagaaccaagttggaaacacactttagaatcatccaggagaacttcccgaacctagcaagacaggccaacattcaaattcaggaaatccagagaacctcagtaagatacaccatgagaaaatcagtctcaagacacacaatcatcagattctctaaggtcaaaatggggaaaaaaaaaaaaaaa--gcagttacgtgcagccagaaagacaggccaggtcacttataaagggaatcccatcagactaacagcaaaactcccacaagccaaaagggattgggggccaatattcaacattcttaaagaaaagaatttccagcctagaatttcatgtctggtctaagtttcataagcaaaggagaaataaaatcttttttagacaagcaaatgctgaggaaatttattaacaccaggactgcctggctcctgaaggaagcattaaatatggaaaagaaaaatctttaccaggcactacaacaacacactgaggtacacaaactaatgatactatgaagcaactacataaacaagtctgcaaaataaccagctagcatcatgatgacagattccaactcacacataacaatatttaccttaaatgtaaatgggcaaaatgccc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17385439 6699 + 46275980 cacatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatgggtgaagttggaaaccatcattctcagcaaactatcgcaaggacaaaaaacaaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacacaccggggcctgttgtggggtggggatagtggggagggatagcattaggagatatacctaatgttaaatgacgagttaatgggtgtagcacaccaacatggcacatgtacacatatgtaacaaa-------------------------ATAACTTAAAGTATAATTTTTTaaaagtgaccacaaatctaaagaaaatggtcaaaaacaactatttgaagactccataaattgtccaaaatcatgcaacaaattgagatgtatttattcaggaaaagcctccaggaaggacagtgggagtctggggcatttatatcgggagctgctcccttcccctactaccttccagctttgttagcatggtagatacttgaaggtaggacaagctgcgaaaaatagcagctttgctgttggaggggggatcacttagtttgaagtggagcactaaacaactctatgtccaggggcattattgaaaatagtcgcaatctctgtggcaaacaaatagggaaggtcaacgacatagctatcctaagcatgaggtcctagccagagccagcaacaaagtggcaaactagctagaaaatgaacaagaagattggggaatgagatgatagtactgggacttgataagttcctctctgtctctcgaaatttggaaggctgcacagatgcacatgtataggagaaaccagaaagggccctagccatccactcatccctgactgaatatgaaatcttgtgaatgcacagaagaaatgtgagaggtcctgaaagaaagcaaaagctgaaactgacttgtgaactgcctgaattttgaatatgttcccaaacatacagtcaagtcaatgcaaagagggtgaaaatattactgggtcaaggtagttgagcatgttttctgaacaatcattagctaaccactaagctatgctgtcacaagggtgaacccctaagaggctaccgttaagaatgctaaaaagattattt---taaaaaaaaaagaaaagaaaaactgagtagaaacattagagaatgcattctgtcaaaaaaa-gaaaaagaaaaaagaacgaaagaaa--------atgaaaaaagactccacatgtttggtcctggcaaattactaaacacagacaccagcaacaacaatctacaacaacaacaaaaaaatcagaatccagagttggaacaatacattatgtgtaactagacatatgcctagttataagaacaaaaaaa-tacagacatgtaaagaaacaagaaaaggtgccccaagcaaatgggatgaaaaggcagtcaGGAagagaggcagagtaagatggcagaatagaaagttccaccaactgttccctcataaggacaccaatttaactatcgacacagaagaaaaaaaa-tacctttataagaacgaaaaatcaggtgagccctcatagtacttggttttaactatgtattgatgaaaaacacactgaagagacagaaaaaacaatcttgaatctccaatgccagcccccaacac---aaccctgggagcagtggcatggtgcagacagcatctctgggtgctggggaagcacagcaattgtgaggcattgacctcagtgctgtcctgttatagcagaaagggaaactggaccaaactcagctgacactcacccaggaagggaacatttaaccagccctagccagagaggaattgctgatcccagcggtcccaacttgagttcccacaaaccttggcacttaaggccaaagtgctctgtgtctccaaataaacttgaaaggtagcctaggccataaggactgaaagtcttaggtgagtcctagggcttaactgggcccagaagacgatggactttgggggcacatgacatactgagacattagctgggacagccaagagagcgttgacatcaccccttctctaaccccaggatgcagagcttacagcttgaaaatagttcccatccttccacttgaagagaagagaggaagagtgtggatgactttgtcttgcattttggatactagctcagccacagcaggatggggcactagttagagttgtaagtccttcaatacaggccttagctcccagaccacatttctagacatggcctgagccagaaaataaatcctctgccttgaagtcaagaaacaagtcctgacaacatttatcacctaactgaagaacggttgggccctgaacaaccagatctacacccagatactatgtcaagggccttgggtgagcctctgaggcttactggcttcaggtgagattcaacatattaccagcagtggtggtgaagggatgaaattccttctacttgagaaaagcagaggaaaaagtaaaggagactttgtcttgcacctcaggtactaactcaaccacggcagggtagagcaccaagcaggctcctgggca-------ggggggaggtccccgatttcagcactggattcttggacagcatctctggacctgccctgggctggaggggagcttcctgccctaaaggttgagtcccaggccagggaaaattcacaataagctgacttaacccttgagctttaaggaaatatcagtggtgtctggcagaatgcttgatgggactgtggtgggagaggcttctctgcctttgggaaaataagggaagagtgggaagcactgtgtcttgtggtttgagtgccagctcaggtgcagtacaatagaacaccaggtagacttctaaggtttttgcctctagaccccaactccaaggtggcatctctggacccaccttaggcctggggaaagtcaccatctttaatggaagaacacatggctggctgactctgccacctgctgattgtataaccccagaaccttgagcaaacaaaggcagtacacaggaaatggatacagcaggctttgggggagaaccagtgttgtgctggcttcaggtctgactcagtgcagtcatagtgatggtggcttgtgtcattccatctccagctttagacggctcagaacagggagacatactctgttaggaagaaagggaagagaataagagtctctgcctggtaatccagagaatcctgctgaatcttgtataagaccattaaagcaatacctctatgagtctgcaagaactacagcattactggcttggaatgatcccataaaacagataaagtttagatcataacacccaagtcctttcaaatattttgaaaacctgcccaataaggaagggtacaaacaattccagactgagaagactacaatgaatacataactcttcaatgcccagacacagagaaacctctgcaggtatcaaggcattccaggaaagcatgacatcaccagatgaactaaataagtcaccaggaacgaatactggagaaacagagatatgtgaccttttagacacaggattcataatggccgttttaaggacactcaaataaattcaagataacacaaagaaggaattaagaattctattagaaaaatttaacagagattaaaataatttgaaggaattaagaagaagttctggagctgaaaaatgcaattggcacactgaagaatgcactagagtcctttagtagcagaattgatcaagcagaaagaagaattagtgagcttgaagacagtttatttgaaaacacacagtcaggggagaaaaaa-aggaaaaagaatgaacaataaagcacacctacaggaaggaaagaaagaagaatacaccatgaaaaaaccagaaagcacatttaaaaaatggcaggagtaagtccttacttatcaataataacattgaatgtaagtggattaaatcctttaatcaaaagacatagacagaatgaaaaaaa-gactgaatgaatgaaaaagcaagacccattgatctgttgccatcaagaaatacatttcacccatgaagacacacatagactgaaaataaagggatggaaaaagatacttcatagctaaaaaaaaagaacatgagtagctataattatattagataaaatagattttgagacaaaaactataagagaaaaatgtcactatacaataataaagtggcaaattcaacaagagaatataacaactttaaatatatatgtacccaacattagagcacctagatgtataaagaaaatactattagagctaaagagagatgggccccaatacaataatagctggagatttcaacactccactttcagcattgaacagatcttccagatacaaaatcaacaaagaaacgtcatactcagtcttcactaaagaccaaatgggtctaatagatatttacagaacatttcattcagtggctgcagaatacacattttttctcagcacaagaattattctcaaaaaacaggccatacattagatcacaaaacaaggtttaaaactcacaatgaaataaaattagaaattgataacaagaggaattttggaaactgtgcacatacatggatacaaaccaatgcattcttgaatgtccagtgaatcaataaagaaatgaagaaagaaactaaaaaatgtcttgaaacagatgataatggaaaaacaacatcctaaacctatgattagggatacagcaaaagcaatattaagactctgtcttttgtaaatagcccagtcttgagtatgtctttattagcagaatgaaaatggactaatacagtgaattgctgctggtagagtggggcattgctaaaaaggtacccaaaaatgtagaagcaaatttggaacttggtaacaggaagaggttggaacagtttgggtggctcagaagaagactggaaaatgtgggaaagtttggaacttcctacagacttgttgaatggctttgcccaaaatgctgatagtgatatggacaataaaatccaggcagaggtggtcccagatgaacaagaggaatttgttggaaactggagcaaaagtgacttatgttatagcaaagaaactggtggcattttgctcctgccctagagatttgagaaactttgaacttgagagaaatgattttgggtatctggtagaagaaatttctaagcagaaaagcattcaagaggtgacttgagtgctgttaaaggcattcagctttgtaagggaagcagagcatataagttcagaaaatttgcagcctgacaatgtgatagaaaaaaaaa-gtcccattttctgaggagaaattcaagccagctgcagatatttgcataagtaatgagaagctgaacgttaattcccaagacaatgggg-aaaatgtctccagggcatatcagaggtcttcacagcagccctggaagccaaggaagaaaagatgacttcatggaccaggctaagagtcccaatgctgggtgcagtctacggacttggtgccctgcatcccagctgctccagctgtgactaaaaggggccaagctacagttcaggccatggcttcagagggttgaagccccatctattggcagcttgcacgtggtgttgagcctgtgggtgcacaggagtcgagaattaaggtttggaaacctccacctatatttcaggagatgtatggaaatgcctggatgcccaggcaaaagtt-gctgcaggggtggggtgctcttgggggacctctgctagggcagtgcagaagggaaatgtggggatgaagccccccacacagagtccccattggggcactgcctagtggagctgtgagaagaggtccaacatccttcaggccccagaatggtagatccacctacagtttgGtagaccaagcagaagaaaagatatcagagcttgaatactatcttgatgaaataaggcaggcagacaagattagaggaaaaagaaagaaaaggagcaaacaaaactgctgagaactatgagattatgttacaggatggaacttacaactaataggggtatgtaaaagagatggagaaaacagaaccaagttggaaacacactttagaatcatccaggagaacttcccgaacctagcaagacaggccaacattcaaattcaggaaatccagagaacctcagtaagatacaccatgagaaaatcagtctcaagacacacaatcatcagattctctaaggtcaaaatggggaaaaaaaaaaaaaaa-agcagttacgtgcagccagaaagacaggccaggtcacttataaagggaatcccatcagactaacagcaaaactcccacaagccaaaagggattgggggccaatattcaacattcttaaagaaaagaatttccagcctagaatttcatgtctggtctaagtttcataagcaaaggagaaataaaatcttttttagacaagcaaatgctgaggaaatttattaacaccaggactgcctggctcctgaaggaagcattaaatatggaaaagaaaaatctttaccaggcactacaacaacacactgaggtacacaaactaatgatactatgaagcaactacataaacaagtctgcaaaataaccagctagcatcatgatgacaggttccaactcacacataacaatatttaccttaaatgtaaatgggcaaaatgccc i panPan2.chr21 I 513 C 0 s gorGor5.CYUI01015003v1 3324346 6700 - 13858734 cacatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatgggtgaagttggaaaccatcattctcagcaaactattgcaaggacaaaaaac-aaacaccacatgttctcactcataggtgggaattgaacaaggagaacacatggacacaggaa-gggaatatcacacaccggggtctgttgtggggtagggggagaggggagggatagcattaggagatatacctaatgttaaatgacgagttaatgggcgcagcacaccaacatggcacatgtatacatatgtaacaaacctgcacattgtgcaaatgtaccctataacttaaagtataatTTTTaaaaagtgaccacaaatctaaagaaaatggtcaaaaacaactatttgaagactccataaattgtccaaaatcatgcaacaaattgagatgtatttattcaggaaaagcctccaggaaggacaatgggagtctggggcatttatatcgggagctgctcccttcccctactaccttccagctttgttagcatggtagatacttgaaggtaggacaagctgtgaaaaatagcagctttgctgttggaggg-ggatcacttagtttgaagtggagcactaaacaactctatgt-caggggcattattgaaaatagtcgcaatctctgtggcaaacaaatagggaaggtcaacgacatagctatcctaagcttgaggtcctagccagagcaagcaacaaagtggcaaactagctagaaaatgaacaagaagattggggaatgagatgatagtattgggacttgataagttcctctctgtctctcgaaatttggaaggctgcacagatgcacatgtataggagaaaccagaaagggccctagccatccactcatccctgactgaatatgaaatcttgtgaatgcacagaagaaatgtgagaggtcctgaaagaaagcaaaagctgaaactgacttgtgaactgcctgaattttgaatatgttcccaaacatacagtcaagtcaatgcaaagagggtgaaaatattactgggtcaaggtagttaagcatgttttctgaacaatcattagctaaccactaagctatg-tgtcacaagggtgaatccctaagaggctaccgttaagaatgctaaaaagattattttaaaaaaaaaaaaagaaaagaaaaactgagtagaaacattagagtatgcattctgtcaaaaaa--gaaaaagaaaaaagaacgaaagaa---------acgaaaaaagactccacatgtttggtcctggcaaattactaaacacagacaccagcaacaacaatctacaacaaaaa-aaaaaaatcagaatccagagttgcaacaatactttatgtgtaactagacatatgcctagttataagaacaaaaaaa-tacagacatataaagaaacaagaaaaggtgccccaaacaaatgggatgaaaagacagtcaGGAagagaggcagagtaagatggcagaatagaaagttccaccaactgttccctcataaggacaccaatttaactatcgacacagaagaaaaaaaa-tacctttataagaaccaaaaatcaggtgagccctcatagtacttggttttaactatgtattgatgaaaaacacactgaagagacagaaaaaacaatcttgaatctccaatgccagccccccacaccacaaccctgggagcagtggaatggtgcagacagcatctctgggtgctggggaagcacagcaattgtgaggcattgacctcagtgctgtcctgttatagcagaaagggaaattggaccaaactcagctgacactcacccaggaa-ggaacatttaaccagccctagccggagaggaattgctgat-ccagcggtcccaacttgagttcccgcaaaccttggcacttaaggccaaagtgctctgtgtctccaaataaacttgaaaggtagcctaggccataaggactgaaagtcttagttgagtcctagggcttaactggg-ccagaagacgatggactttgggggcacatgacgtactgagaaatcagctgggacagccaagagagcattgacatcaccccttctctaaccccaggatgcacagctcacagcttgaaaatagtccccatccttccacttgaagagaagagaggaagagtgtggatgactttgtcttgcattttggatactagctcagccacagcaggatggggcactagttagagttgtaagtccttcaatacaggccttagctcccagaccacatttctagacatggcctgagccagaaaataaatcctctgccttgaagtcaagaaacaagtcctgacaacatttatcacctaactgaagaac-gttgggccctgaacaaccagatctacacccagatactatgtcaagggccttgggtcagcctctgaggcttactggcttcaggtgagattcaacatattaccagcagtggtggtgaagggatgaaattccttctacttgagaaaagcagaggaaaaagtaaaggagattttgtcttgcacctcaggtactaactcaaccacggcagggtagagcaccaagcaggctcctgg----------tgggggaggtccccgatttcagcactggattcttgaacagcatctctggacctgccctgggctggaggggagcttcctgccctaaaggttgagtcccaggccggggaaaattcacaataagctgacttaa-ccttgagctttaaggaaatatcagtggtgtctggcagaatgcttgat-ggactgtggtgggagaggcttctctgcctttgggaaaataagggaaaagtgggaagcactgtgtcttgtggtttgagtgccagctcaggtgcagtacaatagaacaccaggtagacttctaaggtttttgcctctagaccccaactccaaggcggcatctctggacccaccttaggcctggggaaagtcaccacctttaatggaagaacacatgcctggctgactctgccacctgctgattgtataaccccagaaccttgagcaaacaaaggcagtacacaggaaattgatacagcaggcctt-gaggagaaccagtgttgtgctggcttcaggtctgactcagtgcagtcatagtgatggtggcttgtgtcattccatctccagctttagacggctcagaacagggggacatactctgttaggaagaaagggaagagaataagagtctctgcctggtaatccagagaatcctgctgaatcttgtataagaccattaaagcaatacctctatgagtctgcaagaactacagcattactggcttggaatgcccccataaaacagataaagtttagatcataacacccaagtcctttcaaatattttgaaaacctgcccaataaggaagggtacaaacaattccagactgagaagactacaatgaatacataactcttcaatgcccagacacagagaaacctctgcaggtatcaaggcattccaggaaagcatgacatcaccaaatgaactaaataagtcaccaggaacgaatactggagaaacagagatatgtgaccttttagacacaggattcataatggccgttttaaggacactcaaataaattcaagataacacaaacaaggaattaagaattctatcagaaaaatttaacagagattaaaataatttgaaagaattaagaagaagttctggagctgaaaaatgcaattggcacactgaagaatgcactagagtcctttagtagcagaattgatcaagcagaaagaagaattagtgagcttgaagacagtttatttgaaaacacacagtcaggggagaaaaaaaggaaaaaagaatgaacaataaagcacacctacaggaaggaaagaaagaagaatacaccatgaaaaaaccagaaaacacatttaaaaaatggcaggagtaagtccttacttatcaataataacattgaatgtaagtggattaaatcctttaatcaaaagacatagacggaatgaaaaaaa-gactgaatgaatgaaaaagcaagacccattgatctgttgctgtcaagaaatacatttcacccatcaagacacacatagactgaaaataaagggatggaaaaagatatttcatagctaaaaaaaaggaacacgagtagctataattatattagataaaatagattttgagacaaaaactataagagaaaaatgtcactatacaataataaagtggcaaattcaacaagagaatataacaactttaaatatatatgtacccaacattagagcacctagatgtataaagaaaatattattagagctaaagagagatgggccccaatacaataatagctggagatttcaacactccactttcgacattgaacagatcttccagacacaaaatcaacaaagaaacgtcatactcagtcttcgctaaagaccaaat-ggtctaatagatatttacagaacatttcattcagtggctgcagaatacacattttttctcagcacatgaattattctc-aaaaacaggccatacattagatcacaaaacaaggtttaaaactcacaatgaaataaaattagaaattgataacaagaggaattttggaaactgtacaaatacatggatataaaccaatgcattcctgaatgtccagtgaatcaataaagaaatgaagaaagaaactaaaaaatgtcttgaaacagatgataatggaaacacaacatcctaaacctatgattagggatacagcaaaagcaatattaagactctgtcttttgtaaatagcccagtcttgagtatgtctttattagcagaatgaaaatggactaatacagtgaattgctgctggtagcgtggggcattgctaaaaaggtaccc-aaaatgtagaagcaaactt-gaacttggtaacaggaagaggttggaacagtttgggtggctcagaagaagactggaaaatgtgggaaagtttggaacttcctacagacttgttgaatggctttgcccaaaatgctgatagtgatatggacaataaaatccaggctgaggtggtcccagatgaacaagaggaatttgttggaaactggagcaaaagtgactcatgttatagcaaagagactggtggcattttgctcctgccctagagatttgagaaactttaaacttgagagaaatgattttgggtatctggtagaagaaatgtctaagcagaaaagcattcaagaggtgacttgggtgctgttaaaggcattcagctttgtaagggaagcagagcacataagttcagaaaatttgcagcctgacaatgtgatagaaaaaaaaa-gtcccattttctgaggagaaattcaagccagctgcagatatttgcataagtaatgagaagctgaacgttaattcccaagacaatggggaaaaatgtctccagggcatatca-agatcttcacagcagccctggatgccaacgaagaaaagatgacttcatggaccaggctaagagtcccaatgctgggtgcagtctagggacttggtgccctgcatcccagctgctccagctgtgactaaaaggggccaagctacagttcaggccatggcttcagaggattgaagccccatctattgaaagcttgcacgtggtgttgagcctgtgggtgcacaggagtcaagaattaaggtttggaaacctccgcctatatttcaggagatgtatggaaatgcttggatgcccaggcaaaagtt-tctgcatgggtggggtgctcatggggaacctctgctagggcagtgcagaagggaaatgtggggatgaag-cccccacacagagtccccattggggcactgcctagtggagctgtgagaagaggtccaacatccttcagaccccagaatggtagatccacctacag-ttGGtagaccaagcagaagaaaagatatcagagcttgaatactatcttgatgaaataaggcaggcagacaagattagaggaaaaagaaagaaaaggagcaaacaaaactgctgagaactatgagattatgttacaggatggaacctacaactaataggggtacctaaaagagatggagaaaacagaaccaagttggaaacacactttagaatcatccaggagaacttccccaacctagcaagacaggccaacattcaaattcaggaaatccagagaacctcagtaagataaaccatgagaaaatcaatctcaagacacacaatcatcagattctctaaggtcaaaatggggaaaaaaaa--------tgcagttacgtgcagccatagagaaaggccaggtcacttataaagggaatcccatcagactaacagcaaaactcccacaagccaaaagggattgggggccaatattcaacattcttaaagaaaagaatttccagcctagaatttcatgtctggtctaagtttcataagcaaaggagaaataaaatcttttttagacaagcaaatgctgaggaaatttattaacgtcaggactgcctggctcctgaaggaagcattaaatatggaaaagaaaaatctttaccagccactacaacaacacactgaagtacacaaactaatgatactatgaagcaactacataaacaagtctgcaaaataaccagctagcatcatgacgacaggttccaactcacacataacaatatttaccttaaatgtaaatgggcaaaatgccc i gorGor5.CYUI01015003v1 C 0 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8491143 8045 + 21915920 I e macNem1.NW_012019910v1 8762276 6932 + 9440265 I e manLeu1.NW_012102865v1 2251348 6629 + 4234846 I e chlSab2.chr2 15065938 6798 - 90373283 I e macFas5.chr3 162281285 7122 - 192294377 I e rheMac8.chr3 155456980 7244 - 185818997 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=17200.000000 s hg38.chr21_KI270874v1_alt 140237 29 + 166743 caattaaaagacacag-aatgacaagctgg s panTro5.chr21 3766748 29 + 33445071 caattaaaagacacag-aatgacaagctgg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17392138 29 + 46275980 caattaaaagacacag-aatgacaagctgg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3331046 29 - 13858734 caattaaaagacacag-aatgacaagctgg i gorGor5.CYUI01015003v1 C 0 C 0 s macFas5.chr3 162288407 25 - 192294377 caataaaaaaaaaTAACAGTAACAa----- i macFas5.chr3 I 7122 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8491143 8045 + 21915920 I e macNem1.NW_012019910v1 8762276 6932 + 9440265 I e manLeu1.NW_012102865v1 2251348 6629 + 4234846 I e chlSab2.chr2 15065938 6798 - 90373283 I e rheMac8.chr3 155456980 7244 - 185818997 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=4787526.000000 s hg38.chr21_KI270874v1_alt 140266 1255 + 166743 ataaagagttaagatccattggtgtgctgtattcaagagacccatctcaaatgcaaacacacacatagactcaaaataaaagaatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgatatcctagtttatgacaaaatagacattaaaccaacaaagatcaaaaaagacaaagaaaagaattatataataaaacaggtgtcaatttaacaagaaaagctaactatcataaatatatatgcctccaatacaggagcacccagattcacaaaacaagttcttagagacctacaaagagatttagactcccacacaataatagtgggtgactttaacaccccactgacaatattatacagaaaattaacaatgatattcaggacttgaactcagctctggaaccagtggacctgatagatatctacagaactctccaccccaaaacaacagaatatacattatttttggtgccacatggcacttattctaaaattggttacataattaacagtaaatcattcctcagccaatgaaaaagaactaaaatcat----aacagtctctcagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatggaaattgaacaaactgcttttgaatgacttctgggtaaataatgaaattaaggcagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagtactaaatgcctatatcaaaaagctagaaagatctcaaatcaaaactctaacataacaactaaaaccaagagc-aaaaaaaaacacctcaaagctagcagaagacaagaaataaccaagctcagagcataactgaatcagatagagacatgaaaaacccttcaaaagaaatcaatgaatacagaagctg--tttttttgaaaaaaaaaaaaa--------gacatagactgctagctagactaataaagaagaaa--agagaagaatcaaataaacacaataaaaactgataaagggaacattgccactg-atccacagaaatacaaacaatcctcacagaatactataaacacctctatgcaaataagctagaaaatctagaagaaatttataaattcctggacatatacaacctcccaagactgaaccaggaagaagtcgaatccctgaatagaccaataacatgttctgaaa s panTro5.chr21 3766777 1257 + 33445071 ataaagagttaagatccattggtgtgctgtattcaagagacccatctcaaatgcaaacacacacaaagactcaaaataaaagaatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgcaatcctagtttctgacaaaatagacattaaaccaacaaagatcaaaaaagacaaagaaaggaattatataataaaa-aggtgtcaatttaacaagaaaagctaactatcctaaatatatatgcctccaatacaggagcacccagattcacaaaacaagttcttagagacctacaaagagatttagattcccacacaataatagtgggtgactttaacaccccagtgacaatattatacagaaaattaacagcaatattcaggacttgaactcagctctggaacaagtggacctgatagatatctacagaactctccaccccaaaacaacagaatatacattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcattcctcagccaatgaaaaagaattaaaatcat----aacagtctctcagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatggaaattgaacaaactgcttttgaatgactcctgggtaaataatgaaattaaggcagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttacgaggaaatattatagcactaaatacccatatcaaaaagctagaaagatctcaaatcaacaccctaacataac---taaaaccaagagc-aaaaaaaaacatctcaaagctaggagaagacaagaaataaccaagctcagagcataactgaatcagatagagacatgaaaaacccttcaaaagaaatcaatgaatacagaagctg--tttttttgaaaaaaaaaaaaa----aaaagacatagactgctagctagactaataaagaagaaaggagagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactg-ccccacagaaatacaaacaatcctcatagaatactataaacacctctatgcaaataagctagaaaatctaggagaaatttataaattcctggacatatacaacctcccaagactgaaccaggaagaagtcgaatccctgaatagaccaataacaagttctgaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17392167 1258 + 46275980 ataaagagttaagatccattggtgtgctgtattcaagagacccatctcaaatgcaaacacacaaaaagactcaaaataaaagaatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgcaatcctagtttctgacaaaatagacattaaaccaacaaagatcaaaaaagacaaagaaaggaattatataataaaa-aggtgtcaatttaacaagaaaagctaactatcctaaatatatatgcctccaatacaggagcacccagattcacaaaacaagttcttagagacctacaaagagatttagattcccacacaataatagtgggtgactttaacaccccagtgacaatattacacagaaaattaacagcgatattcaggacttgaactcagctctggaacaagtggacctgatggatatctacagaactctccaccccaaaacaacagaatatacattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcattcctcagccaatgaaaaataattaaaatcat----aacagtctctcagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatggaaattgaacaaactgcttttgaatgactcctgggtaaataatgaaattaaggcagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtatcagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagcactaaatacccatatcaaaaagctagaaagatctcaaatcaacaccctaacataacaactaaaaccaagagc-aaaaaaaacaacctcaaagctaggagaagacaagaaataaccaagctcagagcataactgaatcagatagagacatgaaaaacccttcaaaagaaatcaatgaatacagaagctgttttttttttgaaaaaaaaaaaa--------gacatagactgctagctagactaataaagaagaaaggagagaagaatcaaataaacacaataaaaactgataaagggaacatcaacactg-ccccacagaaatacaaacaatcctcacagaatactataaacacctctatgcaaataagctagaaaatctagaagaaatttataaattcctggacatatacaacctcccaagactgaaccaggaagaagtcgaatccctgaatagaccaataacaagttctgaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3331075 1249 - 13858734 ataaagagttaagatccattggtgtgccgtattcaagagacccatctcaaatgcaaacacacacatagactcaaaataaaagaatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgcaatcctagtttctgacaaaatagacattaaaccaacaaagatcaaaaaagacaaagaaa-gaattatataataaaaaaggtgtcaatttaacaagaaaagctaactatcctaaatatatatgcctccaatacaggagcacccagattcataaaacaggttcttagagacctacaaagagatttagattcccacacaataatagtgggtgactttaacaccccactgacaatattatacagaaaattaacaatgatattcaggacttgaactcagctctggaacaagtggatctgatagatatctacagaactctccaccccaaaacaacagaatatacattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtatatcattcctcagccaatgaaaaagaactaaaatcat----aacagtctctcagaccacagtgcaatcaaattagaactcaagatgaagaaactcactcaaaaccacacaactacatggaaattgaacaaactgcttttgaatggctcctgggtaaataatgaaattaaggcacaaatc---aagttctttgaaaccaatgagaacaaag-gacagtgtaccagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagcactaaatgcccatatcgaaaagctagaaagatctcaaatcaacaccctaacataacaactaaaaccaagagc-aaaaaaaa-cacctcaaagctagcagaagacaagaaataaccaagctcagagcataactgaatcagatagagacatgaaaaacccttcaaaagaaatcaatgaatatggaagctg--tttttt--gaaaaaaaaaaaa--------gacatagactgctagctagactaataaagaagaaaagagagaagaatcaaataaacacaataaaaactgataaagggaacaccaccattg-ccccacagaaatacaaacaatcctcacagaatactataaacacctctacgcaaataagctagaaaatctagaagaaatttataaattcctggacatatacaacctcccaagactgaaccaggaagaagtcgaatccctgaatagaccaataacaagttctgaaa i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155464224 1259 - 185818997 ataaagagttaagatccattggtgtgctatagtcaagagacccgtctcaaatgcaaaaacacacatggactcaaaataaaaggatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggagttgaaattctagtttctgacaaaatagacattaaaccaacaaagattgaaaaagacaaagaaaggaactatataacagcaaaggtgtcaatttaaaaagaaaagctaactatcctaaatacatatgcatccaatacaggagcacccagattcacaaaacaagttcttagagacctagaaagagatttagactcccacaaaataatagtaggtgactttaacatcccactgacaatattatacagaaaattaagtatgctattcaggacttgaactcagctctggatcaggtggacctgatagatatctacagaactctgcaccccaaaacaacagaatatatattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcactcctcagccaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatgggaattgaacaaactgcttttgaatgactcctgggtaaagaatgaaattaagacagaaatc---aagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagtactaaatg-ccatatcaaaaagctagaaagatctcaaatcaacaccctaacataacagctaaaaccgagagc-aaaaaaaa-cacctcaaagttggcagaagacaagaaacaaccaagctcagagcataaatgaatgagacagagacatgaaaaacccttcaaaaaaaatcaatgaccacagaagctg--gtttttttgaaaaataaaataaaataaaagaggtagactgctagctagactaataaagaag-----acagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactgcccccacagaaatacaaacaatcctcacagaatactataaacacctctatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccaggaagaagttgaatccctgaatagaccaataacaaattctgaaa i rheMac8.chr3 I 7244 C 0 s macFas5.chr3 162288432 1258 - 192294377 -taaagagttaagatccattggtgtgctatagtcaagagacccgtctcaaatgcaaaaacacacatggactcaaaataaaaggatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgaaattctagtttctgacaaaatagacattaaaccaacaaagatcgaaaaagacaaagaaaggaactatataacagcaaaggtgtcaatttaaaaagaaaagctaactatcctaaatatatatgcatccaatacaggagcacccagattcacaaaacaagttcttagagacctagaaagagatttagactcccacaaaataatagtaggtgactttaacatcccactgacaatattatacagaaaattaagtatgctattcaggacttgaactcagctctggatcaggtggacctgatagatatctacagaactctgcaccccaaaacaacagaatatatattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcactcctcagccaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatgggaattgaacaaactgcttttgaatgactcctgggtaaagaatgaaattaagacagaaatc---aagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagcactaaatg-ccatatcaaaaagctagaaagatctcaaatcaacaccctaacataacagctaaaaccgagagc-aaaaaaaa-cacctcaaagttggcagaagacaagaaacaaccaagctcagagcataaatgaatgagacagagacatgaaaaacccttcaaaaaaaatcaatgaccacagaagctg--gtttttttgaaaaataaaataaaataaaagaggtagactgctagctagactaataaagaag-----acagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactgcccccacagaaatacaaacaatcctcacagaatactataaacacctctatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccaggaagaagttgaatccctgaatagaccaataacaaattctgaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8769208 1259 + 9440265 ataaagagttaagatccattggtgtgctatagtcaagagacccgtctcaaatgcaaaaacacacatggactcaaaataaaaggatggacgaaaatttaccaagcaaatggaaaacagaaaaaagcaggggttgaaattctagtttctgacaaaatagacattaaaccaacaaagatcgaaaaagacaaagaaaggaactatataacagcaaaggtgtcaatttaaaaagaaaagctaactatcctaaatatatatgcatccaatacaggagcacccagattcacaaaacaagttcttagagacctagaaagagatttagactcccacaaaataatagtaggtgactttaacatcccactgacaatattatacagaaaattaagtatgctattcaggacttgaactcagctctggatcaggtggacctgatagatatctacagaactctgcaccccaaaacaacagaatatatattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcactcctcagccaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatgggaattgaacaaactgcttttgaatgactcctgggtaaagaatgaaattaagacagaaatc---aagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagcactaaatg-ccatatcaaaaagctagaaagatctcaaatcaacaccctaacataacagctaaaaccgagagc-aaaaaaaa-cacctcaaagttggcagaagacaagaaacaaccaagctcagagcataaatgaatgagacagagacatgaaaaacccttcaaaaaaaatcaatgaccacagaagctg--gtttttttgaaaaataaaataaaataaaagaggtagactgctagctagactaataaagaag-----acagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactgcccccacagaaatacaaacaatcctcacagaatactataaacacctttatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccacgaagaagttgaatccctgaatagaccaataacaaattctgaaa i macNem1.NW_012019910v1 I 6932 I 45 s cerAty1.NW_012002954v1 8499188 1258 + 21915920 ataaagagttaagatccattggtgtgctatattcaagagacccatctcaaatgcaaaaacacacatggactc-----aaaaggatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcagaggttgcaatcctagtttctgacaaaatagacattaaaccaacaaagaatgaaaaagacaaagaaaggaactatataacagcaaaggtgtcaatttaaaaagaaaagctaactctcctaaatatatatgcatccaatacaggagcacccagattcacaaaacaagttcttagagacctagaaagagatttagactcccacacaataatagtgggtgactttaacatcccactgacaatattatacagaaaattaagtatgatattcaggacttgaactcagctctggatcaggtggacctgatagatatctacagaactctccaccccaaaacaacagaatatatattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcactcctcagacaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactgcatggaaattgaacaaactgcttttgaatgactcctgggtaaagaatgaaattaaggcagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgctactaaggcagtgttaagaggaaatattatagcactaaatgcccatatcaaaaacctagaaagatctcaaatcaacaccctaacataacagctaaaactgagagcaaaaaaaaa-cacctcaaagctagcagaagatgagaaacaaccaagctcagagcataactgaatgagacagagacatgaaaaacccttcaaacaaattcaatgaccacagaagctg--g-ttttttgaaaaataaaataaaataaaagaggtagactgctagctagactaataaagaag-----agagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactacccccacagaaatacaaacaatcctcacagaatactataaacacctctatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccaggaagaagttgaaaccctgaatagaccaataacaaattctgaaa i cerAty1.NW_012002954v1 I 8045 C 0 s chlSab2.chr2 15072736 1262 - 90373283 ataaagagttaagatccattggtgtgctatattcaagagacccatctcaaatgcaaaaacacacatggactcaaaataaaaggatggaggaaaatttaccaagcaaatggaaaacggaaaaaagcaggggttgcaatcctagtttctgacaaaatagacattaaaccaacaaagatcgaaaaagacaaagaaaggaactatataacagcaaaggtgtcaatttaaaaagaaaagctaactatcctaaatatacatgcatccaatacaggagcacccagattcacaaaacaagttcttagagacctagaaagagatttagactcccacacaataatagcgggtgactttaacatcccactgacaatattatacagaaaattaagtatgatattcaggacttgaactcagctctggatcaggtgaacgtgatagatatctacagaactctccaccccaaaacaacagaatacatattctttttggtgccacatggcacttattctaaaattggtcacataattaacagtcaatcactcctcagccaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatggaaattgaacagactgcttttgaatgactcctgggtaaagaatgaaattaacacagaaatcaagaagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgctactaaggcagtgttaagaggaaatattatagcactaaatgcccatatcaaaaacctagaaagatctcaaatcaacaccctaacataacagctaaaaccgagagc-agaaaaaa-cacctcaaagctagcagaagatgagaaacaaccaagctcagagcataactgaatgagacagagacatgaaaaacccttcaaaaaaattcaatgaccacagaagcta--g-ttttttgaaaaataaaataaaataaaagaggtagactgctagctagactaataaagaag-----agagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactacccccacagaaatacaaacaatcctcacagaatactataaacacctctatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccaggaagaagttgaaaccctgaatagaccaataacaaattctgaaa i chlSab2.chr2 I 6798 C 0 s manLeu1.NW_012102865v1 2257977 1259 + 4234846 ataaagagttaagatccattggtgtgctatattcaagagacccatctcaaatgcaaaaacacacatggactcaaaataaaaggatggaggaaaatttaccaagcaaatggaaaacagaaaaaagcagtggttgcaattctagtttctgacaaaatagacattaaaccaacaaagatcgaaaaagacaaagaaaggaactatataacagcaaaggtgtcaatttaaaaagaaaagctaactatcctaaatatatatgcatccaatacaggagcacccagattcacaaaacaagttcttagagacctagaaagagatttagactcccacaaaataatagtaggtgactttaacatcccactgacaatattatacagaaagttaagtatgctattcaggacttgaactcagctctggatcaggtggacctgatagatatctacagaactctgcaccccaaaacaacagaatatatattcgttttggtgccacatggcacttattctaaaattggtcacataattaacagtaaatcactcctcagccaatgaaaaagaactaaaatcataacaaacagtctcttagaccacagtgcaatcaaattagaactcaagattaagaaactcactcaaaaccacacaactacatgggaattgaacaaactgcttttgaatgactcctgggtaaacaatgaaattaagacagaaatc---aagttctttgaaaccaatgagaacaaagagacaatgtaccagaatctctgggatgcaactaaggcagtgttaagaggaaatattatagcactaaatg-ccatatcaaaaagctagaaagatctcaaatcaacaccctaacataacagctaaaaccgagagc-aaaagaaa-cacctcaaagttggcagaagacaagaaacaaccaagctcagagcataaatgaatgagacagagacatgaaaaacccttcaaaaaaaatcaatgaccacagaagctg--gtttttttgaaaaataaaataaaataaaataggtagactgctagctagactaataaagaag-----acagaagaatcaaataaacacaataaaaactgataaagggaacatcaccactgcccccacagaaatacaaacaatcctcacagaatactataaacacctctatgtaaataaactagaaaatctggaagaaa-ttataaattcctggacacatacaacctcccaagactgaaccaggaagaagttgaatccctgaatagaccaataacaaattctgaaa i manLeu1.NW_012102865v1 I 6629 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=108732.000000 s hg38.chr21_KI270874v1_alt 141521 40 + 166743 ttgaggcagtaataaataacctatgaaccaaaaaaagccc s panTro5.chr21 3768034 40 + 33445071 ttgaggcagtaataaataacctatgaaccaaaaaaagccc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17393425 40 + 46275980 ttgaggcagtaataaataacctatgaaccaaaaaaagccc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3332324 40 - 13858734 ttgaggcagtaataaataacctatgaaccaaaaaaagccc i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155465483 40 - 185818997 ttgagacagtaataaatagcctatgaaccaaaaaaaaaaa i rheMac8.chr3 C 0 I 2 s macFas5.chr3 162289690 40 - 192294377 ttgagacagtaataaatagcctatgaaccaaaaaaaaaaa i macFas5.chr3 C 0 I 2 s cerAty1.NW_012002954v1 8500446 40 + 21915920 ttgagacagtaataaatagcctatgaaccaaaaaaaaaaa i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15073998 40 - 90373283 ttgagacagtaacaaatagcctaggaaccaaaaaaaaaaa i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012102865v1 2259236 39 + 4234846 ttgagacagtaataaatagcctatgaaccaaaaaaaaaa- i manLeu1.NW_012102865v1 C 0 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e macNem1.NW_012019910v1 8770467 45 + 9440265 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=30160.000000 s hg38.chr21_KI270874v1_alt 141561 9 + 166743 aggatcaga s panTro5.chr21 3768074 9 + 33445071 aggatcaga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17393465 9 + 46275980 aggatcaga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3332364 9 - 13858734 aggatcaga i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155465525 9 - 185818997 aggatcaga i rheMac8.chr3 I 2 C 0 s macFas5.chr3 162289732 9 - 192294377 aggatcaga i macFas5.chr3 I 2 C 0 s macNem1.NW_012019910v1 8770512 9 + 9440265 aggatcaga i macNem1.NW_012019910v1 I 45 C 0 s cerAty1.NW_012002954v1 8500486 9 + 21915920 aaaaaaaaa i cerAty1.NW_012002954v1 C 0 I 32 s chlSab2.chr2 15074039 9 - 90373283 aggatcaga i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012102865v1 2259275 9 + 4234846 aagatcaga i manLeu1.NW_012102865v1 C 0 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=182257.000000 s hg38.chr21_KI270874v1_alt 141570 57 + 166743 tggatttacagccgaattttaccagaagtacaaagaggacctgacaccctttcttct s panTro5.chr21 3768083 57 + 33445071 tggatttacagccgaattttaccagaagtacaaagaggacctgataccctttcttct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17393474 57 + 46275980 tggatttacagccgaattttaccagaagtacaaagaggacctgataccctttcttct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3332373 57 - 13858734 tggatttacagccgaattttaccagaagtacaaagaggatctgataccctttcttct i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155465534 57 - 185818997 tggatttacagccaagttttaccagaagcacaaagaggatctgataccctttcttct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162289741 57 - 192294377 tggatttacagccaagttttaccagaagcacaaagaggatctgataccctttcttct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8770521 57 + 9440265 tggatttacagccaagttttaccagaagcacaaagaggatctgataccctttcttct i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr2 15074048 57 - 90373283 tggatttacagccgagttttatcagaagtacaaagaggatctgataccctttcttct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2259284 57 + 4234846 tggatttacagccaagttttaccagaagcacaaagaggatctgataccctttcttct i manLeu1.NW_012102865v1 C 0 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e cerAty1.NW_012002954v1 8500495 32 + 21915920 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=3736814.000000 s hg38.chr21_KI270874v1_alt 141627 1002 + 166743 gaaactattccaaataattgaaaaggagagactcctccctaac-tgttctatgaggccagaatcatcctgataccaaaacctggcagagacaaaacaaaaatagaaaacttcaggccagtatccctaatgaacactgatgcaaaaattctcaataaaacactggtaaagcaaataaagcagtacatcaaaaagcttatccaacatcatcaagttggcttcatcattgggatgcaagactggttcagcatatgcaaatcaataaaaaaaattcatcacataaacagatctaaagacaaaaaccacatgattatctcaatagatgcacaaaaagcctttggtaaaattcaacatcccttcatgttaaaaactctcaataaactaggtattaaaggaacatacctcaaaataat--gagtcatttattacaaacccacagccaatatcatactgaatgggcaaaacctggaagcattccccttggaaatcagcacaagacaagtatgccctctctcactactccttttcaacacaatattggaagttctcaccagggcaatcgggcaacagaaagaaataaaagtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataatcctatatctagaaaaccccatcatctcaggccaaaagcttcttaagctgataagcaatgccagcaaagtctcaggatacaaaatcaatgtgcaaaag-cacaagcatttctatacaccaacaacaggcaagcagagagccaaatcatgaatgaacttccattcacaattgctacaaagagaataaaatacctaggaataaagctaacaagggaattgaaggccctcctcaagaagaactacaaatgactgctcaaggaaatcagaaaggacacaagcagatggaaaagcattccatgctcatggatag-aagaatcaatatcatggaaatggccatagtacccaaaataatttatagattcaatgctattcc s panTro5.chr21 3768140 997 + 33445071 gaaactattccaaataattgaaaaggagagactcctccctaac-tgttctatgaggccagaatcatcctgataccaaaacctggcagagataaaacaaaaatagaaaacttcaggccagtatccctaatgaacactgatgcaaaaattctcaataaaacactggtaaagcgaataaagcagtacatcaaaaagcttatccaacatcatcaagttggcttcatcattgggatgcaagactggttcagcatatgcaaatcaataaacaaaattcatcacataaacagatctaaagacaaaaaccacatgattatctcaatagatgcacaaaaagcctttggtaaaattcaacatcccttcatgttaaaaactctcaataaact-ggtattaaaggaacatacctcaaaataat--gagtcatttatgacaaacccacagccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagcacaagacaaggatgccctctctcaccactccttttcaacacaatattggaagttctcaccagggcaatcaggcaacagaaagaaataaaagtattcaaataggaagagaggaatta----tgtctctgtttgcagatgacataatcctatatctagaaaaccccatcatctcaggccaaaagcttcttaagctgataagcaatgccagcaaagtctcaggatacaaaatcaatgtgcaaaag-cacaagcatttctatacaccaacaacaggcaagcagagagccaaatcatgaatgaacttccattcacaattgttacaaagagaataaaatacctaggaataaagctaacaagggaattgaaggccctcttcaagaagaactacaaatgactgctcaaggaaatcagaaaggacacaagcagatggaaaagcattccatgctcatggatag-aagaatcaatatcatggaaatggccatagtactcaaaataatttatagattcaatgctattcc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17393531 997 + 46275980 gaaactattccaaataattgaaaaggagagactcctccctaac-tgttctatgaggccagaatcatcctgataccaaaacctggcagagataaaacaaaaatagaaaacttcaggccagtatccctaatgaacactgatgcaaaaattctcaataaaacactggtaaagcgaataaagcagtacatcaaaaagcttatccaacatcatcaagttggcttcatcattgggatgcaagactggttcagcatatgcaaatcaataaacaaaattcatcacataaacagatctaaagacaaaaaccacatgattatctcaatagatgcacaaaaagcctttggcaaaattcaacatcccttcatgttaaaaactctcaataaact-ggtattaaaggaacatacctcaaaataat--gagtcatttatgacaaacccacagccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagcacaagacaaggatgccctctctcaccactccttttcaacacaatattggaagttctcaccagggcaatcaggcaacagaaagaaataaaagtattcaaataggaagagaggaatta----tgtctctgtttgcagatgacataatcctatatctagaaaaccccatcatctcaggccaaaagcttcttaagctgataagcaacgccagcaaagtctcaggatacaaaatcaatgtgcaaaag-cacaagcatttctatacaccaacaacaggcaagcagagagccaaatcatgaatgaacttccattcacaattgttacaaagagaataaaatacctaggaataaagctaacaagggaattgaaggccctcttcaagaagaactacaaatgactgctcaaggaaatcagaaaggacacaagcagatggaaaagcattccatgctcatggatag-aagagtcaatatcatggaaatggccatagtactcaaaataatttatagattcaatgctattcc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3332430 999 - 13858734 gaaactattccaaataattgaaaaggagagactcctccctaac-tgttctatgaggccagaatcatcctgataccaaaacctggcagagataaaacaaaaatagaaaacttcaggccagtatccctaatgaaaactgatgcaaaaattctcaataaaacactggtaaagcgaataaagcagtacatcaaaaagcttatccaacatcatcaagttggcttcatcatt-ggatgcaagactggttcagcatatgcaaatcaataaacaaaattcatcacataaacagatctaaagacaaaaaccacatgattatctcaatagacgcacaaaaagcctttggtaaaattcaacatcccttcatgttaaaaactctcaataaact-agtattaaaggaacatacctcaaaataat--gagtcatttatgacaaacccacagccaatatcatactgaatgggcaaaggctggaagcattccccttggaaatcagcacaagacaaggatgccctctctcaccactccttttcaacacaatattggaagttctcaccagggcaatcaggcaatagaaagaaataaaagtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataatcctatatctagaaaaccccatcatctcaggccaaaagcttcttaagctgataagcaatgccagcaaagtctcgggatacaaaatcaatgtgcaaaag-cacaagcatttctatacaccaacaacgggcaagcagagagccaaatcatgaatgaacttccattcacaattgctacaaagagaataaaatacctaggaataaagctaacaagggaattgaaggccctcttcaagaagaactacaaatgactgctcaaggaaatcagaaaggacacaagcagatggaaaagcattccatgctca-ggatag-aagaatcaatatcatggaaatggccatagtacccaaaataatttatagattcaatgctattcc i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155465591 982 - 185818997 gaaattattccaaataattgaaaaggagagacccctccctaacacattctatgagaccagcatcatcctgataccaaaacctggcagagatacaacaaaaatagaaaacttcaggccaatatccttaatgaacattgatgcaaaaattatcaataaaatgctggcaaagtgaataaagcaacacatcaaaaagcttatccaaaatgatcaagttggcttcatccttgggatgcaagactggttcggcatatgcaaatcaataaacaaaatccatcacacaaacagatataaagacaaaaaccacatgattatctcaatagatgcagaaaatgcctttgataaaattcaacatcccttcatgttaaaaactctccataaactaggtattaaaggaatatacctcaaaataat--gagtcacttatgacaaacccacaaccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagcacaagacatggatgccctctctcaccactccttttcaacataatattggaagttctggccagggcaatcaggcaagagaaagaaataaaggtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataaacctatatctagaaaaccccatcatctcacgccaaaagcttcttaacctgataagcaatgccagctaagtctcaggatacaaaatcagtgtgcaagagtcacaagcatttctatacaccaacagcagtcaagcagagagtcaaatcatgaatgaacttccattcacaattgctacaaagagaataaagtacctaggaatagagctaacaagggaattgaaggacctcctcaagaagaactacaaac-----------------------gacacaagcagatggaaaaacattccatgctcatggatagaaaggatcaatatcatggaaatggtcatagtgcccaaagtaatttatagattcaatgctattca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162289798 982 - 192294377 gaaattattccaaataattgaaaaggagagactcctccctaacacattctatgagaccagcatcatcctgataccaaaacctggcagagatacaacaaaaatagaaaacttcaggccaatatccttaatgaacattgatgcaaaaattatcaataaaatgctggcaaagtgaataaagcaacacatcaaaaagcttatccaaaatgatcaagttggcttcatccttgggatgcaagactggttcggcatatgcaaatcaataaacaaaatccatcacacaaacagatataaagacaaaaaccacatgattatctcaatagatgcagaaaatgcctttgataaaattcaacatcccttcatgttaaaaactctccataaactaggtattaaaggaatatacctcaaaataat--gagtcatttatgacaaacccacaaccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagcacaagacatggatgccctctctcaccactccttttcaacataatattggaagttctggccagggcaatcaggcaagagaaagaaataaaggtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataaacctatatctagaaaaccccatcatctcacgccaaaagcttcttaacctgataagcaatgccagctaagtctcacgatacaaaatcaatgtgcaagagtcacaagcatttctatacaccaacagcagtcaagcagagagtcaaatcatgaatgaacttccattcacaattgctacaaagagaataaagtacctaggaatagagctaacaagggaattgaaggacctcctcaagaagaactacaaac-----------------------gacacaagcagatggaaaaacattccatgctcatggatagaaaggatcaatatcatggaaatggtcatagtgcccaaagtaatttatagattcaatgctattca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8770578 980 + 9440265 gaaattattccaaataattgaaaaggagagactcctccctaacacattctatgagaccagcatcatcctgataccaaaacctggcagagatacaacaaaaatagaaaacttcaggccaatatcctcaatgaacattgatgcaaaaattatcaataaaatgctggcaaagtgaataaagcaacacatcaaaaagcttatccaaaatgatcaagttggcttcatccttgggatgcaagactggttcggcatatgcaaatcaataaacaaaatccatcacataaacagatataaagacaaaaaccacatgattatctcaatagatgcagaaaatgcctttgataaaattcaacatcccttcatgttaaaaactctccataaactaggtattaaagaaatatacctcaaaataat--gagtcatttatgacaaacccacaaccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagtacaagacatggatgccctctctcaccactccttttcaacataatattggaagttctggccagggcaatcaggc--gagaaagaaataaaggtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataaacctatatctagaaaaccccatcatctcatgccaaaagcttcttaacctgataagcaatgccagctaagtctcaggatacaaaatcaatgtgcaagagtcacaagcatttctatacaccaacagcagtcaagcagagagtcaaatcatgaatgaacttccattcacaattgctacaaaaagaataaagtacctaggaatagagctaacaagggaattgaaggacctcctcaagaagaactacaaac-----------------------gacacaagcagatggaaaaacattccatgctcatggatagaaaggatcaatatcatggaaatggtcatagtgcccaaagtaatttatagattcaatgctattca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8500527 964 + 21915920 aaaactattccaaacaacagaaaaagagggactcctccctaacacatgctatgaggccagcatcatcctgataccaaaacctggcagagatacaacaaaaatagaaaacttcaggccaatatccttaatgaacattgatgcaaaaattatcaataaaatgctggcaaagtgaataaagcaacacatcaaaaagcttatccaaaatgatcaagttggcttcatccttggg------------------atatgcaaatcaataaacaaaatccatcactcaaacagatataaagacaaaaaccacatgattatctcaatagatgcagaaaatgcctttgataaaattcaacatcgcttcatgttaaaaactctccataaactagatattaaaggaatatacctcaaaataat--gagtcatttatgacaaacccacaaccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagcacaagacatggatgccctctcttaccactccttttcaacataatattggaagttctggccagggcaatcaggcaagagaaagaaataaaggtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataaacttatatctagaaaacctcaccatctcacgccaaaagcttcttaacctgataagcaatgccagctaagtctcaggatacaaaatcaatgtgcaaaagtcacaagcatttctatacaccaacagtagtcaagcagagagccaaatcatgaatgaacttccattcacaattgctacaaagagaataaagtacctaggaatagagctaacaagggaattgaaggacctcttcaagaagaactacaaac-----------------------gacacaagcagatggaaaaacattccatgctcatggatagaaaggatcaatatcatggaaatggtcatagtgcccaaagtaatttatagattcaatgctattca i cerAty1.NW_012002954v1 I 32 C 0 s chlSab2.chr2 15074105 1006 - 90373283 gaaattattccaaataattgaaaaggagagactcctccataacacatgctatgaggccagcatcatcctgataccaaaacctggcagagatacaataaaaatagaaaacttcaggccaatatccttaatgaacattgatgcaaaaattatcaataaaatgctggcaaagtgaataaagcaacacatcaaaaagcttatccaaaatgatcaagttggcttcatccttgggatgcaagactgggtcagcatatgcaaatcaataaacaaaattcatcacacaaacagatataaagacaaaaaccacatgattacctcaatagatgcagaaaatgcctttgataaaattcaacagcccttcatgctaaaaactctcaataaattcagtattgatggaatatatctcaaaataataagagccatttatgacaaacccacagccaatatcatactgaatgggcaaaagctggaagcattccccttgaaaatcagcacaagacatggatgccctctctcaccactccttttcaacataatattggaagttctggccc-ggcaatcaggcaagagaaagaaataaaggtattcaaacaggaagagaggaagtcaaactgtctctgtttgcagatgccataatcctatatctagaaaaccccatcatctcacgccaaaagcttcttaacctgataagcaatgccagctaagtctcaggatacaaaatcaatgtgcaaaagtcacaagcatttctacacaccaacagcaggcaagcagagagccaaatcatgaatgaacatctattcacaattgctacaaagagaataaagtacctaggaatagagctaacaagggaattgaaggacctctttaagaaaaactacaaacaactgctgaaggaaatcagaaaggacacaagcagatggaaaaacattccatgctcatggatagaaagtatcaatatcacggaaatggtcatagtgcccaaagtaatttatagattcaatgctattcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2259341 982 + 4234846 gaaattattccaaataattgaaaaggagagactcctccctaacacattctatgagaccagcatcatcctgataccaaaacctggcagagacacaacaaaaatagaaaacttcaggccaatatccttaatgaacattgatgcaaaaattatcaataaaatgcgggcaaagtgaataaagcaacacatcaaaaagcttatccaaaatgatcaagttggcttcatccttgggatgcaagactggttcggcatatgcaaatcaataaacaaaatccatcacacaaacagatataaagacaaaaaccacatgattatctcaatagatgcagaaaatgcctttgataaaattcaacgtcccttcatgttaaaaactctccataaactaggtattaaaggaatatacctcaaaataat--gagtcatttatgacaaacccacaaccaatatcatactgaatgggcaaaagctggaagcattccccttggaaatcagcacaagacatggatgccctctctcaccactccttttcaacataatattggaagttctggccagggcaatcaggcaagagaaagaaataaaggtattcaaataggaagagaggaagtcaaactgtctctgtttgcagatgacataaacttatatctagaaaaccccatcatctcacgccaaaagcttcttaacctgataagcaatgccagctaagtctcaggatacaaaatcaatgtgcaagagtcacaagcatttctatacaccaacagcagtcaagcagagagtcaaatcatgaatgaacttccattcacaattgctacaaagagaataaagtacctaggaatagagctaacaagggaattgaaggacctcctcaagaagaactacaaac-----------------------gacacaagcagatggaaaaacattccatgctcatggatagaaaggatcaatatcatggaaatggtcatagtgcccaaagtaatttatagattcaatgctattca i manLeu1.NW_012102865v1 C 0 C 0 e colAng1.NW_012120598v1 249473 9993 - 13750039 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=2671900.000000 s hg38.chr21_KI270874v1_alt 142629 577 + 166743 cattaaactaccattgatattcttcagagaattcttagaaattcttagaaaaagctattttaaaattcatatggaaccagaaaagagttcatatagccaagaaaatcctaagcaaaaggaacaaagctggaggcatcatgctaccagacttcaaactatactacaaggctacagtaaccaaaacggcatgatattggtacaaaaacagatatataaaccaatgtgaaataatagagaactcagaagtaagaccacacatatacaaccacctgatcttcaacaaccccaacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggagaactggctagccgtatgaataaaattgaaactgtaccccttccttacaccttatac-aaaaattaacttaagatgggttaaatatttaaatataaaacccaaagctataaaagcactacaagaaaatctaggcaataccattcaggacataggcacaggcaaagatttcatgacaaaatcgccaaaagcaattgtgacaaaagcaaaagttgacaaatgggatctaattaaactaaa s panTro5.chr21 3769137 577 + 33445071 cattaaactaccattgatattcttcagagaattcttagaaattcttagaaaaagctattttaaaattcatatggaaccagaaaagagttcatataaccaagaaaatcctaagcaaaaggaacaaagctggaggcatcaggctaccagacttcaaactatactacaaggctacagtaaccaaaacggcatgatattggtacaaaaacagatatataaaccaatgtgaaataatagagaactcagaagtaagaccacacatatacaaccacctgatcttcaacaaacccaacaaaaacaagcaatggggaaaggattccctatttaataaatgatgctgggagaactggctagccatatgaataaaattgaaactggaccccttccttacacattatac-aaaaattaacttaagatgggttaaatatttaaatataaaacccaaagctataaaagcaatacaagaaaatctaggcaataccattcaggacataggcacaggcaaagatttcatgacaaaatcgccaaaagcaattgtgacaaaagcaaaagttgacaaatgggttctaattaaactaaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17394528 577 + 46275980 cattaaactaccattgatattcttcagagaattcttagaaattcttagaaaaagctattttaaaattcatatggaaccagaaaagagttcatataaccaagaaaatcctaagcaaaaggaacaaagctggaggcatcaggctaccagacttcaaactatactacaaggctacagtaaccaaaacggcatgatattggtacaaaaacagatatataaaccaatgtgaaataatagagaactcagaagtaagaccacacatatacaaccacctgatcttcaacaaacccaacaaaaacaagcaatggggaaaggattccctatttaataaatgatgctgggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatac-aaaaattaacttaagatgggttaaatatttaaatataaaacccaaagctataaaagcaatacaagaaaatctaggcaataccattgaggacataggcacaggcaaagatttcatgacaaaatcaccaaaagcaattgtgacaaaagcaaaagttgacaaatgggttctaattaaactaaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3333429 574 - 13858734 cattaaactaccattgatattcttcagagaattcttagaaattcttagaaaaagctattttaaaattcatatggaaccagaaaagagttca-atagccaagaaaatcctaagcaaaaggaacaaagctggaggcatcatgctaccagacttcaaactatactacaaggctacagtaaccaaaacagcatgatattggtacaaaaacagatatataaaccaatgtgaaataatagagaactcagaagtaagaccaca-atatacaaccacctgatcttcaacaaacccaacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatac-aaaaattaacttaagatgagttaaatatttaaatataaaacccaaagctataaaagcactacaagaaaatctaggcaataccattcaggacataggcacaggcaaagatttcatgacaaaatcgccaaaagcaattgtgacagaagcaaaagttgacaaatgagatctaattaaact-aa i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155466573 563 - 185818997 cattaaactaccattgacattcttcagagaa-------------ttagaaaaagctattttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatcctaaagaaaaagaacaaagctggaggtattatgctaccagacttcaaactatactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagactgcacatatacaaccacctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatac-aaaaattaacttaagataggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcagtgccattcaggacataggcacaggcaaagatttcatgacaatatggccaaaagcaattgcaacaaaagcaaaagttgacaaacgggatctaattaaactaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162290780 563 - 192294377 cgttaaactaccattgacattcttcagagaa-------------ttagaaaaagctattttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatccgaaagaaaaagaacaaagctggaggtattatgctaccagactccaaactacactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagaccgcacatatacaaccacctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatac-aaaaattaacttaagatgggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcagtgccattcaggacataggcacaggcaaagatttcatgacaatatggccaaaagcaattgcaacaaaagcaaaagttgacaaacgggatctaattaaactaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8771558 563 + 9440265 cattaaactaccattgacattcttcagagaa-------------ttagaaaaagctattttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatcctaaagaaaaagaacaaagctggaggtattacgctaccagacttcaaactatactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagaccgcacatatacaaccacctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatac-aaaaattaacttaagatgggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcagtgccattcaggacataggcacaggcaaagatttcatgacaatatggccaaaagcaattgcaacaaaagcaaaagttgacaaacgggatctaattaaactaaa i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8501491 564 + 21915920 cattaaactactattgacattcttcagagaa-------------ttagaaaaagctattttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatcctaaacaaaaagaacaaagctggaggtattatgctatcagacttcaaactatactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagaacacacatatacaaccacctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctaggagaactgtctagccatatgaataaaattgaaactggaccccttccttacaccttatacaaaaaattaacttaagatgggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcagtgccattcaggacataggcacaggcaaagatttcatgacaaaatggccaaaagcaattgcaacaaaagcaaaagttgacaaacgtaatctaattaaactaag i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15075111 563 - 90373283 cattaaactaccattgacattcttcagagaa-------------ttagaaaaagctattttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatcctaaacgaaaagaacaaagctggaggtattatgctaccagactttaaactatactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagaccacacatatacaaccacctgatcttcaacaaacctgaccaaaacaagcaatggggaaaggattccctatttaataaacggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttatacgtcatac-aaaaattaacttaagataggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcaataccattcaggacataggcacaggcaaagatttcatgacaaaatggccaaaagcaattgcaacaaaagcaaaagttgacaaacgggatctaattaaactaaa i chlSab2.chr2 C 0 I 149 s manLeu1.NW_012102865v1 2260323 563 + 4234846 cattaaactaccattgacattcttcagagaa-------------ttagaaaaagctattttaaaattcatattgaaccagaaaagagttcatatagccaagaaaatcctaaacaaaaagaacaaagctggaggtattatgctaccagacttcaagccatactac-aggctacagtaaccaaaacaacatgatactgatacaaaaacagatatatagaccaatgtgaaagaatagagaactcagaaataagaccgcacatatacaaccacctgatcttcaacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatac-aaaaattaacttaagatgggttaaagacttaaatgtaaaactcaaagctataaaagcactacaagaaaatctaggcagtgccattcaggacataggcacaggcaaagatttcatgacaatatggccaaaagcaattgcaacaaaagcaaaagttgacaaacgggatctaattaaactgaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 259466 563 - 13750039 cattaaactaccattgacattcttcagagaa-------------ttagaaaaagctattttaaaactcatattgaaccagaaaagagttcatatagccaagaaaatcctaaacaaaaagaacaaagctggaggtattatgctaccagacttcaaactatactac-aggctacagtgaccaaaacaacatgatattgatacaaaaacagatatacagaccaatgtgaaagagtagagaactcagaaataagaccacacatatacaaccacctgatcttcaacaaacctgacaaaaacaagcaatgaggaaaggattccctatttaataaatggtgctaggagaactggctagccatatgaataaaattgaaactggaccccttccttacaccttatac-aaaaattaacttaagatgggttaaagatttaaatgtaaaactcaaagccataaaagcactacaagaaaatccaggcaataccattcaggacataggcacaggcaaagatttcatgacaaaatggccaaaagcaattgcagcaaaagcaaaagttgacaaatgggatctaattaaactaaa i colAng1.NW_012120598v1 I 9993 C 0 e nomLeu3.chr25 4502122 12816 + 32716333 I a score=506641.000000 s hg38.chr21_KI270874v1_alt 143206 151 + 166743 agagcttctgcacagcaaatgaaactatcatctgagtgaacaagcaacctaaaaaatgagagaaaatttttgaaatctatcaatctggcaaaggtctaat-tccagaatctacaaggaacttaaacaaatttacaaaaa-----------acaaaaaaaacaa- s panTro5.chr21 3769714 149 + 33445071 agagcttctgc-cagcaaatgaaactatcatccgagtgaacaagcaacctaaaaattgagagaaaattttttaaatctatcaatctggcaaaggtctaat-tccagaatctacaaggaacttaaacaaatttacaagaa-----------acaaaaaaaa-aa- i panTro5.chr21 C 0 C 0 s panPan2.chr21 17395105 150 + 46275980 agagcttctgcacagcaaatgaaactatcatccgagtgaacaagcaacctaaaaaatgagagaaaattttttaaatctatcaatctggcaaaggtctaat-tccagaatctacaaggaacttaaacaaatttacaagaa-----------acaaaaaaaa-aa- i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3334003 150 - 13858734 agagcttctgcacagcaaatgaaactatcatccgagtgaacaagcaacctaaaaaatgagagaaaatgtttgaaatctatgaatctggcaaaggtctaat-tccagaatctacaaggaatttaaacatatttacaagaa-----------acaaaaaaac-aa- i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155467136 162 - 185818997 agagcttctgcacagcaaatgaaattatcatcagattggacaagcaacctaaaaa-tcggagaaaattattgcaatctatcaatctgacagaggtctaatatccagaatctacaaggagcttaaacaaattcacaagagtaaaaaaaaaaaaaaaaaaaa-aaa i rheMac8.chr3 C 0 I 1 s macFas5.chr3 162291343 162 - 192294377 agagcttctgcacagcaaatgaaattatcatcagattgaacaagcaacctaaaaa-tgggagaaaatttttgcaatctatcaatctgacagaggtctaatatccagaatctacaaggagcttaaacaaattcacaagagaaaaaaaaaaaaaaaaaaaaa-aaa i macFas5.chr3 C 0 I 1 s macNem1.NW_012019910v1 8772121 151 + 9440265 agagcttctgcacagcaaatgaaattatcatcagattgaacaagcaacctaaaaa-tgggagaaaatttttgcaatctatcaatctgacagaggtctaatatccagaatctacaaggagcttaaacaaattcacaagag-----------aaaaaaaaaa-aaa i macNem1.NW_012019910v1 C 0 I 1 s cerAty1.NW_012002954v1 8502055 148 + 21915920 agagcttctgcacagcaaatgaaattatcatcagattgaacaggcaacctaaaaa-tgggagaaaatttttgcaatctatcaatctgacagaggtctaatatccagaatctacaaggagcttaaacaaattcacaagaa--------------acgaaaa-aaa i cerAty1.NW_012002954v1 C 0 I 1 s manLeu1.NW_012102865v1 2260886 155 + 4234846 agagcttctgcacagcaaatgaaattatcatcagattgaacaagcaatctaaaaa-tgggagaaaatttttgcaatctatcaatctgacagaggtctaatatccagaatctacaagaagcttaaacaaattcacgagaa-------aaaaaaaaaaaaaa-aaa i manLeu1.NW_012102865v1 C 0 I 1 s colAng1.NW_012120598v1 260029 151 - 13750039 agagcttctgcacagcaaatgaaattatcatcagattgaacaagcaacctaaaaa-tgggagaaaatttttgcaatctatcaatctgacagaggtctaatatccagaatctacaaggagcttaaacaaattcacaagaa-----------acaaaaaaaa-aaa i colAng1.NW_012120598v1 C 0 I 2 e chlSab2.chr2 15075674 149 - 90373283 I e nomLeu3.chr25 4502122 12816 + 32716333 I a score=3551661.000000 s hg38.chr21_KI270874v1_alt 143357 754 + 166743 ccccatcaaaaagtgggcaaaggaca----tgaacagaagcttctcaaaataagacattcctgcagccaacaaacatatgaaaaaaggctcaacatcactgatcattagagaagtgcaagtcaaaatacaataatataccatctcacaccaaatagattggcaattattaaaaagtcaagaaaccacagatactggcaaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaacattttatctaagagctacagaatacataattttttcctcagcatataaatcaatctccagaatagaccataggttaagtcacaaaacaaatcttaaaacatttgaaataatatcaaacatcttctctaaccacaatgaaataaaattagaaaATaataggaatgcttttacactgttggtggaaatgtaagttagttcaaccattatgaaagactgtgcagggattcctcaaagatctagaaccagaaataccatttgacccaccaatcccattactgggtatgtaaccccaaattataaatcattctattacaaagatacatgcacacgtatattgattgcagcactattcacaatagcagggacatggaat-aacccaaatgcccaacaatgctagactggatttaaaaaatatggtacatatacaccatggagtattatgcagccat-aaaaggaatgagatcatgttctctgcaagggcatggatga s panTro5.chr21 3769863 759 + 33445071 ccccatcaaaaagtgggcaaagggcaggcatgaacagaagcttctcaaaataagacattcctgcagccaacaaacatatgaaaaaaggctcaacatcactgatcattagagaagtgcaaatcaaaatacaataatataccagcacacaccaaatagattggcaattattaaaaagtcaagaaaccacagatactggcaaggttgtagagacatagtgcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaacattttatctaagagctacagaatacacaattttttcctcagcatataaatcaatctccagaatagaccataggttaggtcacaaaacaaatcttaaaacatttgaaataatatcaagcatcttctctaaccacaatgaaataaaattagaaaataataggaacgcttttacactgtcggtggaaatgtaaattagttcaaccattatgaaagactgtgcagtgattcctcaaagatctagaaccagaaataccatttgacccaccaattccattactgggtatataaccccaaattataaatcattctattacaaagatacatgcacacgtatattgattgcagcactatacacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttaaaaaatatggtacatatacaccatggagtattatgcagccat-aaaaggaatgagatcatgttctctgcaagggcatggatga i panTro5.chr21 C 0 C 0 s panPan2.chr21 17395255 753 + 46275980 --ccatcaaaaagtgggcaaagggca----tgaacagaagcttctcaaaataagacattcctgcagccaacaaacatatgaaaaaaggctcaacatcactgatcattagagaagtgcaaatcaaaatacaataatataccagcacacaccaaatagattggcaattattaaaaagtcaagaaaccacagatactggcaaggttgtagagacatagtgcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaacattttatctaagagctacagaatacacaattttttcctcagcatataaatcaatctccagaatagaccataggttaggtcacaaaacaaatcttaaaacatttgaaataatatcaagcatcttctctaaccacaatgaaataaaattagaaaATaataggaacgcttttacactgtcggtggaaatgtaaattagttcaaccattatgaaagactgtgcagtgattcctcaaagatctagaaccagaaataccatttgacccaccaattccattactgggtatataaccccaaattataaatcattctattacaaagatacatgcacacgtatattgattgcagcactatacacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttaaaaaatatggtacatatacaccatggagtattatgcagccat-aaaaggaatgagatcatgttctctgcaagggcatggatga i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3334153 750 - 13858734 ccccatcaaaaagtgggcaaaggaca----tgaacagaagcttctcaaaataagacattcctgcagccaacaaac--atgcaaaaaggctcaacatcactgatcattagagaagtgcaaatcaaaatacaatcatata-catctcacacc-aatagattggcaattattaaaaa-tcaagaaaccacagatactggcgaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaacattttatctaagagctacagaatacacaattttttcctcagcacataaatcaatctccagaatagaccataggttaggtcacaaaacaaatcttaaaacatttgagataatatcaaatatcttctctaaccacaatgaaataaaattagaaaataataggaacgcttttacactgttggtggaaatgtaaattagttcaaccattatgaaagactgtgcagtgattcctcaaagatctagaaccagaaatacaatttgacccaccaatcccattactgggtatataaccccaaattataaatcattctattacaaagatacatgcacacgtatattgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggattttaaaaatgtggtacatatacaccatggagtattatgcagccat-aaaaggaatgagatcatgttctctgcaagggcatggatga i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155467299 756 - 185818997 ccctatcaaaaagtgggcaaaggaca----tgaccagaaacttctcaaaataagacattcctgcagccaacaaacacatgaaaaaatgctcaatgtcattgatcattagagaagtgcaaatcaaaacacagtaagataccatctcacaccaatcagaatgccaattattaaaaagtcaagaaaccacacatgctggtgaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaatgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaacatttgaaataatatcaggcatcttctctaaccacagtgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccattgtgaaagacaatgtggtgattgctcaaagatctagaaccagaaatacaatttgacccaccaatcccattactggatatataaccccaaattataaatcgttctattacaaagatacatgcacacgtatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcagtgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaataagatcatgttctttgcaaagacatagatga i rheMac8.chr3 I 1 C 0 s macFas5.chr3 162291506 756 - 192294377 ccctatcaaaaagtgggcaaaagaca----tgaccagaaacttctcaaaataagacattcctgcagccaacaaacacatgaaaaaatgctcaatgtcattgatcattagagaagtgcaaatcaaaacacagtaagataccatctcacaccaatcagaatgccaattattaaaaagtcaagaaaccacacatgctggtgaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaatgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaacatttgaaataatatcaggcatcttctctaaccacagtgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccattgtgaaagacaatgtggtgattgctcaaagatctagaaccagaaatacaatttgacccaccaatcccattactggatatataaccccaaattataaatcgttctattacaaagatacatgcacacgtatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcagtgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaataagatcatgttctttgcaaagacatagatga i macFas5.chr3 I 1 C 0 s macNem1.NW_012019910v1 8772273 756 + 9440265 ccctatcaaaaagtgggcaaaggaca----tgaccagaaacttctcaaaataagacattcctgcagccaacaaacacatgaaaaaatgctcaatgtcattgatcattagagaagtgcaaatcaaaacacagtaagataccatctcacaccaatcagaatgccaattattaaaaagtcaagaaaccacacatgctggtgaggttgtagagaaatagTGcagacataatctgcaccgtagaccaaatgcatccaatagatatttacaaaatgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaacatttgaaataatatcaggcatcttctctaaccacagtgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccattgtgaaagacaatgtggtgattgctcaaagatctagaaccagaaatacgatttgacccaccaatcccattactggatatataaccccaaattataaatcgttctattacaaagatacatgcacacgtatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcagtgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaataagatcatgttctttgcaaagacatagatga i macNem1.NW_012019910v1 I 1 C 0 s cerAty1.NW_012002954v1 8502204 756 + 21915920 ccctatcaaaaagtgggcaaaggaca----tgaacagaaacttctcaaaacaagacattcctgcagccaacaaacacatgaaaagaggctcaacgtcactgatcattagagaaatgcaaatcaaaacacagtaagataccatctcacaccaatcagaatggcaactattaaaaactcaagaaaccacacacactggcgaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgtatccaaaagatatttacaaaacgttttttctaagagctacagaatatacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaacatttgaaataatatcaggcatcttctctaaccacagtgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccatcgtgaaagacagtgtggtgattcctcaaagatctagaaccagtaatacaatttgacccaccaatcccattactggatatataaccccaaattataaatctttctattacaaagatacatgcacacatatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaacgagatcatattctttgcaaggacatggatga i cerAty1.NW_012002954v1 I 1 C 0 s chlSab2.chr2 15075823 756 - 90373283 ccctatcaaaaagtgggcaaaggaca----tgaacagaaacttctcaaaacaagacattcctgcagccaacaaacacatgaaaagaggctcaacgtcactgatcattagagaaatgcaaatcaaaacacagtaagataccatctcacaccaatcagaacagcaattattaaaaagtcaagaaaccacacacactggcaaggttgtagagaaatagTAcagacataatccgcactgtagaccaaatgcatccaatagatatttacaaaacgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaccatttgaaataatatcaggcatcttctctaaccacaatgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccatcgtgaaagacagtgtggtgattcctcaaagatctagagccagaaatacaatttgacccaccaatcccattactggatatataaccccaaattataaatcattctattacaaagatacatgcacacgtatgttgattgaagcactattcacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaatgagatcatgttctttgcaaggacatgaatga i chlSab2.chr2 I 149 C 0 s manLeu1.NW_012102865v1 2261042 756 + 4234846 ccctatcaaaaagtgggcaaaggaca----tgaccagaaacttctcaaaataagacattcctgcagccaacaaacacatgaaaaaatgctcaacgtcattgatcattagagaagtgcaaatcaaaacacagtaagataccatctcataccaatcagaatgccaattattaaaaagtcaagaaaccacacatgctggcgaggttgtagagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaatgttttatctaagagctacagaatacacatttttttcctcagcacataaatcaatctccagaatagaccatatgttaggtcacaaaacaaatcttaaaacatttgaaataatatcaggcatcttctctaaccacaatgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccattgtgaaagacagtgtggtgattcctcaaagatctagaaccagaaatacaatttgacccaccaatcccattactggatatataaccccaaattataaatcgttctattacaaagatacatgcacacgtatgttgattgcagcactattcacaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaataagatcatgttctttgcaaggacatagatga i manLeu1.NW_012102865v1 I 1 C 0 s colAng1.NW_012120598v1 260182 756 - 13750039 ccctatcaaaaagtgggcaaaggaca----tgaacagaaacttctcaaaataagacattcctgcagccaacaaacacatgaaaagtggctcaacgtcactgatcattagagaaattcaaatcaaaacacagtaagataccatctcacaccaatcagaatggcaattattaaaaagtcaagaaaccacacacactggcgaggttgtacagaaatagTGcagacataatctgcactgtagaccaaatgcatccaatagatatttacaaaacattttatctaagagctacagaatacacatttttttcctcagcacataaaccaatctccagaatagaccatatgttaggtcacaaaacaaatctgaaaacatttgaaataatatcaggtatcttctctaaccacaatgaaataaaattagaaaATaataggaaggcttttacactgttggtgggaatgtaaattagttcaaccattgtgagagacagtgtggtgattcctcaaagatctagaaccagaaacacaatttgacccaccaatcccattactggatatataaccccaaattataaatcgttctattacaaagatacacgcacatgtatgttgattgcagcactattcaaaatagcagggacatggaatcaacccaaatgcccatcaatgctagactggatttttaaaatgtggtacatatacaccatggaatactatgcagccataaaaaggaacaagatcatgttctttgcaaggacatagatga i colAng1.NW_012120598v1 I 2 C 0 e nomLeu3.chr25 4502122 12816 + 32716333 I a score=16591759.000000 s hg38.chr21_KI270874v1_alt 144111 3040 + 166743 agctggaagccattatcctcagcaaagtaacacaggaaaagaaaatcaaatgccacatattcccactcataagtgggagctgaaagatgagaacacatggacacagggaggggaataacacacacttggggggcctgtcatgtggtggggtggggggaaggagagcattagaaaaaattgttaatgcatgctgggcttaatacctaggtgatgggttgacagatgcagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacccccagaacttaaaataaaaataaaaTTTGTTT--AAAAAAAGATCATTACAGTCACATCTGGGGTATCTTTTCTGGAGAACaaagaataaaattgtgataacaataaattatcaaatagcatctgaggttgaaaactgaaaatataaaaaagaaacaaatgcaaattatgaagttgaaaagtacaataactgaaatgaaaaactgactagcatgaatcaagagtacatttgagatgatagcaaaaggaataagtaaaattaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaagaagaaacagatcttcagCCACACGGTACTTACGGGTATCAATTTCAAGATCCCCCATAGATACAAAAATCCATGGatgcctaatacaatctaaatgctatgtaaatagttgttaaactctattgtttagggaatggtgac----caaaaaatgtctgtatatgttcaatacagacacaaacgtccttttttcccaaaaattcttgatccagttaattgattcgtggatgtggaactcacagattcagtgggccaactatatgtacaatagaatattattcagcaccccccaa--aaaaaattttgccatttgcaacaacatggatgagc-ctacaggacattatgcgaagtgaaataagccagacacaaaaagaaaaatactgcataatctcatttacatttgaaatccaaagctgaact-catagaaacatagagtaaaaaactgattgcaaggagctggtcaatggcagaaataaagatattttggacagaggttacaaaatttggttataagatgaataagttctggagatctaaagtaaatcattgtaactatagttaatattaatg---tattgtatacttgaaattgcttaaaaaatagatcttacatgttctcacaatgaaaaacaatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatatatcaaaatgtcacattattatacaaggctaaatatacacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaagactcattatgataaatggtatatacaaaagcccttcagctaatattatacttaatagtaaaacattgaatgctttcttcttaatggcgggaacaaacaaatgatttccactactacttcctctattcaataatatactggcagttacagccgattcaataaggcaaaataag------aaaaaaagaaaaagaaaaaaattaaaccttctataatgaaaataaagaagtaaacctgtctttatttgctgatgacataatcctgtttgtgaaaattcctgaggaatacacaaaaactgccagaactaataagttcagaaggtggcagaatacacac--aatatacaaaactttactctat-tttctatacTAGT--aaaaaaaaaaaaaaaaaaaaTCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac--aaaaaaattttaaaagttagccaggcatagtggaatgtacctgtagccccagctactcaggaagctgagtttagaaaaatgcttgcactcaggagttggaggctgcagtgagccataattgtgccactgcactTTTGTGCACTGCCTGCATCCTAACACCcccttactgcaaatgctagcaaagaggccagcacccttgcaattgccaacaccccaccacagccagtgagcgcatgctttgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctacaaactgttctttgtctggcaacacccaccagagtgttgtgaccagcagtccaggaatacctt--gcc------------cctccagtgcagcaggttcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagaggacatggtccagaagtcttgagcagagtcttggcccccaaaaatcttccagaaatgaagccagtttactgaatccacctcacactacaatcaaacccccaaggacatctaataaaataaaatgagaagaaaaccatccaaaggatagctacatcaaagcttcaaagaacatcagcccacaaagatgaggaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgataacactagtttcctaacaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcattgacatacaggagaaagtgaaaacccaatccaaggaatctaaggattacaataaaacaatataggaggtgatagataaaatggtcattaaaagagagaaccacactgatctgacagagctgaaaaacacactacaagaatttcata--------------atgcaatcacaagtattaacagcagaattgaccaaact------------gaggaaagaatatcagggcttgaagactctctctaaaacaactcagtcagagaaaaa--ttttaaaaa-aaataaagaatgaacaaaagctctgagaaatatgccattatgaaaagaaacacattctacgattcactggcgtttgtgaaagaaaggaagagaaattaacca s panTro5.chr21 3770622 3036 + 33445071 agctggaagccattatcctcagcaaagtaacacaggaaaagaaaatcaaatgccacatgttcccactcataagtgggagctgaacgatgagaacacatggacacagggaggggaataacacacacttggggggcctgtcatgtggtggggtggggggaaggagagcattagaaaaaattgctaatgcatgctgggcttaatacctaggtgatgggttgatagatgcagcaagccaccatggcacacatttacctatgtaacaaacctgcatattcggcacgtgtacccccagaacttaaaataaaaataaaatttgttt--aaaaaaagataattaCAGTCACATCTGGGGTATCTTTTCTGGAGAACaaagaataaaattgtgataacaatagattatcaaatagcatctgaggttgaaaactgaaaatataaaaaagaaacaaatgcaaattatgaagttgaaaagtacaataactgaaatgaaaaactgactagcatgaatcaagagtacatttgagatgatagcaaaaggaataagtaaaattaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaagaagaaacagatcttcagCCACACGGTACTTATGGGTATCAATTTCAAGATCCCCCATAGATACAAAAATCCATGGatgcttaatacaatctaaatgctatgtaaatagttgttaaactctattgtttagggaatggtgac----caaaaaatgtctgtatatgttcaatacagacacaaacatccttttttccctaaaattcttgatccagttatttgattcgtggatgtggaactcacagattcagtgggccaactatatgtacaatagaatattattcagcaccccccaa--aaaaatttttgccatttgcaacaacatggatgaac-ctacaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcatttacatttgaaatccaaagctgaact-cgtagaaacatagagtaaaaaaccgattgcaaggagctggtcaatggcagaaataaagatattttggacagaggttacaaaatttggttataagatgaataagttctggagatctaaagtaaatcattgtaactatagttaatatcaatg---tattgtatatttgaaattgcttaaaagatagatcttacatgttctcacaatgaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatatatcaaaatgtcacattattatacaaggctaaatatacacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaagactcattatgataaatggtatatacaaaagcccttcagctaatattatacttaatagtaaaacattgaatgctttcttcttaatggcgggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttacagccgattcaataaggcaaaataag------aaaaaaagaaaaagaaaaaaattaaaccttctatcatgaaaataaagaagtaaacctgtctttatttgctgatgacataatcctgtttgtgaaaattcctgaggaatacacaaaaactgccagaactaataagttcagaaggtggcagaatacacac--aatatacaaaacttta-tc----tttctataATAGTaaaaaaaaaaaaaaaaaaaaaaTCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac--aaaaaatttttaaaagttagccaggcatagtggaatgtacctgtagccccagctactcaggaagctgagtttagaaaaatgcttgcactcaggagtttgaggctgcagtgagccataattgtgccactgcactTTTGTGCACTGCCTGCATCCTAACACCcccttactgcaaatgctagcaaagaggccaccacccttgcaattgccaacaccccaccacagccagtgagcgcatgctttgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctacaaattgttctttgtctggcaacacccaccagagtgttgtgaccagcagtccaggaatacctt--gcc------------cctccagtgcagcaggatcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagaggacatggcccagaagtcttgagcagagtcttggcccccaaaaatcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaagccccaaggacatctaataaaataaaatgagaagaaaaccatccaaagcatagctacatcaaagcttcaaagaacatcagcccacaaagatgaggaagaaccagcacaagaactctggcaactcaaaaatccggagtgtcttcttacctccaaatgataacactagtttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaacagaattcagaatatggacagaaacaaagatcattgacacacaggagaaagtgaaaacccaatccaaggaatctaaggattacaataaaacaatataggaggtgatagataaaatggtcattaaaagagagaaccacactgatctgatagagctgaaaaacacactacaagaatttcata--------------atgcaatcacaagtattaacagcagaattgaccaaact------------gaggaaag--tatcagggcttaaagactctctctaaaacaactcagtcagagaaaat--tttttaaaa-aaataaagaatgaacaaaagctctgagaaatatgccattatgaaaagaaacacattctacgattcactggcatttgtgaaagaaaggaagagaaattaacca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17396008 3034 + 46275980 agctggaagccattatcctcagcaaagtaacacaggaaaagaaaatcaaatgccacatgttcccactcataagtgggagctgaacgatgagaacacatggacacagggaggggaataacacacacttggggggcctgtcatgtggtggggtggggggaaggagagcattagaaaaaattgctaatgcatgctgggcttaatacctaggtgatgggttgatagatgcagcaagccaccatggcacacatttacctatgtaacaaacctgcgtattcggcacgtgtacccccagaacttaaaataaaaataaaaTTTGTTT--AAAAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAACaaagaataaaattgtgataataatagattatcaaatagcatctgaggttgaaaactgaaaatataaaaaagaaacaaatgcaaattatgaagttgaaaagtacaataactgaaatgaaaaactgactagcatgaatcaagagtacatttgagatgatagcaaaaggaataagtaaaattaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaagaagaaacagatcttcagCCACACTGTACTTATGGGTATCAATTTCAAGATCCCCCATAGATACAAAAATCCATGGatgcttaatacaatctaaatgctatgtaaatagttgttaaactctattgtttagggaatggtgac----caaaaaatgtctgtatatgttcaatacagacacaaacatccttttttccctaaaattattgatccagttatttgattcgtggatgtggaactcacagattcagtgggccaactatatgtacaatagaatattattcagcaccccccaa--aaaaatttttgccatttgcaacaacatggatgaac-ctacaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcatttacatttgaaatccaaagctgaact-cgtagaaacatagagtaaaaaaccgattgcaaggagctggtcaatggcagaaataaagatattttggacagaggttacaaaatttggttataagatgaataagttctggagatctaaagtaaatcattgtaactatagttaatatcaatg---tattgtatatttgaaattgcttaaaagatagatcttacatgttctcacaatgaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatatatcaaaatgtcacattattatacaaggctaaatatacacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaagactcattatgataaatggtatatacaaaagcccttcagctaatattatacttaatagtaaaacattgaatgctttcttcttaatggcggaaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttacagccaattcaataaggcaaaataag------aaaaaa--gaaaaagaaaaaattaaaccttctatcatgaaaataaagaagtaaacctgtctttatttgctgatgacataatcctgtttgtgaaaattcctgaggaatacacaaaaactgccagaactaataagttcagaaggtggcagaatacacac--aatatacaaaacttta-tc----tttctataATAGTaaaaaaaaaaaaaaaaaaaataaCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac--aaaaaatttttaaaagttagccaggcatagtggaatgtacctgtagccccagctactcaggaagctgagtttagaaaaatgcttgcactcaggagtttgaggctgcagtgagccataattgtgccactgcactTTTGTGCACTGCCTGCATCCTAACAGCcccttactgcaaatgctagcaaagaggccaccacccttgcagttgccaacaccccaccacagccagtgagcgcatgctttgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctacaaattgttctttgtctggcaacacccaccagagtgttgtgaccagcagtccaggaatacctt--gcc------------cctccagtgcagcaggatcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagaggacatggcccagaagtcttgagcagagtcttggcccccaaaaatcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaagccccaaggacatctaataaaataaaatgagaagaaaaccatccaaagcatagctacatcaaagcttcaaagaacatcagcccacaaagatgaggaagaaccagcacaagaactctggcaactcaaaaatccggagtgtcttcttacctccaaatgataacactagtttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcattgacacacaggagaaagtgaaaacccaatccaaggaatctaaggattacaataaaacaatataggaggtgatagataaaatggtcattaaaagagagaaccacactgatctgatagagctgaaaaacacactacaagaatttcata--------------atgcaatcacaagtattaacagcagaattgaccaaact------------gaggaaag--tatcagggcttaaagactctctctaaaacaactcagtcagagaaaaa--tttttaaaa-aaataaagaatgaacaaaagctctgagaaatatgccattatgaaaagaaacacattctacgattcactggcatttgtgaaagaaaggaagagaaattaacca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3334903 3027 - 13858734 agctggaagccattatcctcagcaaagtaacacaggaaaagaaaatcaaatgccacatgttcccactcataagtgggagctgaactatgagaacacatggacacagggaggggaataacacacacttggggggcctgtcatgtggtggggtggggggaaggagagcattagaaaaaattgctaatgcatgctgggcttaatacctaggtgatgggttgatagatgcagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacgtgtacccccagaacttaaaataaaaataaaatttgttt--aaaaaaagataattaCAGTCACATCTGGGGTATCTTTTCTGGAGAACAAATAATAaaattgtgataacaataaattatcaaatagcatctgaggttgaaaactgaaaatataaaaaagaaacaaatgcaaattatgaagttgaaaagtacaataactgaaatgaaaaactgactagcatgaatcaagagtacatttgagatgacagcaaaaggaataagtaaaattaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaagaagaaacagatcttcagCCACACGGTACTTATGGGTATCAATTTCAAGATCCCCCATAGATACAAAAATCCATGGatgcctaatacaatctaaatgctatgtaaatagttgttaaactctattgtttagggaatggtgac----caaaaaatgtctgtatatgttcaatacagacacaaacgtccttttttccctaaaattcttgatccagttatttgattcgtggatgtggaactcacagattcagtgggccaactatatatacaatagaatattattcagcaccccccaa--aaaaaattttgccatttgcaacaacatggatgaac-ctacaggacattatgctaagtgaaataagccagacac-aaaagaaaaatactgcataatctcatttacatttgaaatccaaagctgaact-catagaaacatagagtaaaaaactgattgcaaggagctggtcaatggcagaaataaagatattttggacagaggttacaaaatttggttataagatgaataagttctggagatctaaagtaaatcattgtaactatagttaatattaatg---tattgtatacttgaaattgcttaaaaaatagatcttacatgttctcacaatgaaaaataatatatatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatatatcaaaatgt-acattattatacaaggctaaatatacactatctttatttgtcaatAATGACTATATTATATATATTAAAGCaactaggaatataaagactcattatgataaatggtatatacaaaagcctttcagctaatattatacttaatagtaaaacattgaatgctttctccttaatggcaggaacaaactactgatttccactactacttcctctattcaataatgtactggcagttacagctgattcaataaggcaaaataag------aaaaaaagaaaaagaaaaaaattaaaccttctatcatgaaaataaagaagtaaacctgtctttatttgctgatgacataatcctgtttgtgaaaattcctgaggaatacacaaaaacttccagaactaataagttcagaaggtggcagaatacacac--aatatacaaaactttactctatctttctatactagt-------aaAAAAAAAAAGAAATCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctct----caaaaaattttaaaagttagccag---cagtggaatgtacctgtagccccagctactcaggaagctgagtttagaaaaatgcttgcactcaggagtttgaggctgcagtgagccataattgtgccactgcactTTTGTGCACTGCCTGCATCCTAACACCcccttactgcaaatgctagcaaagaggccagcacccttgcaattgccaacactccaccacagccagtgagcgcatgctttgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctacaaattgttctttgtctggcaacacccgccagagtgttgtgaccagcagcccaggaatacctt--gcc------------cctccagtgcagcaggttcctaactctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagaggacatggtccagaagtcttgagcagagtcttgacccccaaaaatcttccagaaatgaagccagttgactgaacccacctcacactacaatcaaa-ccccaaggacatctaataaaataaaatgagaagaaaaccatccaaaggatagctacatcaaagcttcaaagaatatcagcccacaaagatgaggaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgataacactagtttcctagcattggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcattgacatacaggagaaagtgaaaacccaatccaaggaatctaaggattacagtaaaacaatataggaggtgatagataaaatggtcattaaaagagagaaccacactgatctgatagagctgaaaaacacactacaagaatttcata--------------atgcaatcacaagtattaacagcagaattgaccaaact------------gaggaaagaatatcagggcttgaagactctctctaaaacaactcagtcagagaaaaa---tttaaaaa-aaataaagaatgaacaaaagctctgagaaatatgccattatgaaaagaaacacattctacaattcactggcgtttgtgagagaaaggaagagaaattaacca i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4514938 3012 + 32716333 agctggaagccattatcctcagcaaagtaacacaggaaaagaaaatcaaatgccacatgttctcactcataagtgggagctgaaggatgagaacacatggacacagggaggggaatgacacacacttggggggcctgtcaggtggtggggtggggggagggagagcattagaaaaaattgctaatgcatgct-ggcttaatacctaggtgatgggttgatagatgcagcaatccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacccccagaacttaaaataaaaataaaatttgttt-aaaaaaaagataattaCAGTCACATCTGGGACATCTTTTCTGGAGAACaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactgaaaatataaaaaataagcaaatacaaattacgaa---gaaaagtacaataactgaaatgaaacattgactagcatgaatcaagagtacatttgagatgatagcaaaaggaaaaagtaaaattaaaagtagatcaatataaatcatttaatctgaatttaaagagtttt---ggagaactaaaaaaagaaacagatcttcagCCACTCGGTACTTACAGGTATCAATTTCAAGATCCCCCATAAATACAAAAATCCATGGatgcctaatacaatgtaaatgctacataaatagttgttaaactgtgttgtttagggaacggtgac----caaaaaatgtctgtatacgttcaatacagatacaaacatccttttttccctaaaattcttgatctagttatttgattcgtggatgtggaactcacagattcaataggccaactgtatgtacaaaagaatattattcagcaccccccca--aacaagctttgccatttgcaacaacatggatgaag-ctacaggacattatgctaagtgaaataagacagacacaaaaagaaaaatacagcataatctcatttacatttgaaatccaaagctgaact-catagaaacatagagtaaaaaagtggttgcaaggagctggtcaatggcagaaataaagatattttagatagagggtacaaaatttggttataagatgaataagttctggagatctaaagtaaatcattgtaactatagttaatattaatg---tattgtatacttgaaattgcttaaaaaatagatcttacatgttctcacaatg-aaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatatatcaaaatgtcac---attatacaagaataaatatatgcaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaact-ggaatataaagactcattatgataaatggtatatacaaaagcccttcagctaatattatacttaatagtaaaacattgactgctttcttcttaatggtgggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagctgattcaataaggcaaaataag------aaaaaaagaaaaagagaaaaattaaaccttctgtaatgaaaataaagaagtaaacctgtctttatttgctgatgac-taatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcagaaggtggcagaatacacacttaatatacaaaacttta-tt----tttctatacTAGT---------AAAAAAAAAAAAATCTGggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgagggaggagggtcatttaatgtcagaagtctgagatctgctagagcaacaaagtgacaccccatctctac--aaaaaaattttaaaagttagccaggcatagtggaatgaacctgtagccccagctactcaggaagctgagtttagaaaaatgcttgcactcaggagtttgaggctgcagtgagccataattgtgccactgcactTTTGTGCACTGCCTGCATCCTAACACCcccttactgcaaatgttagcaaagaggccagcacccttgcaattgccagcaccccaccacagccaatgagcgcacgctctgctgtactgccattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctataaatggttctt----tggcaacacccaccagagtgttgtgactagcagtccaggaatacctt--gcc------------cctccagtgcagcaggttcctaaccctgaggtgccagaggacaaagccagggacccaataacaatcctccagagttagaggacatggtccaggagtcttgagcagagtcttggcacccaaaaatcttccagaaatgaagccagtttactgaacccacctcacactactgtcaaacccccaaggacatctaataaaataaaatgagaagaaaaccatctaaaggatagctatgtcaaagctccaaagaacatcagcccacaaagatgaggaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgataacactagtttcctagcaatggttcttaatcagactgagatggctgaaatgatagaaatagaattcaggatatggacagaaacaaagatcattgacatacaggagaaagtgaaaacccaatccaaggaatctaaggattacaataaaacaatataggaggtgatagataaaatagtcattaaaagaaagaaccacactgatctgatagagctgaaaaacacactacaagaatttcata--------------atgcagtcacaagtattaacagcagaattgaccaaact------------gaggaaagaatatcagggcttgaagactctctctaaaacaactcagtcagagaaaaa--tttaaaaaa-aaataaagaatgaacaaaacctctgagaaatatgccattatgaaaagaaacactttctacgattcactgacatttgtgaaagaaacgaagagaaattaacca i nomLeu3.chr25 I 12816 C 0 s rheMac8.chr3 155468055 3043 - 185818997 agctggaaggcattaacctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagccgaatgatgagaacacatggacacaaggaggggaacaacacacacttgaggggcctgatgagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcatacctagatgatgggttgatagatgtagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaTTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactaaaaatatagga---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaattgactggcatgaatcaagagtacatttgagatgatagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaaaaagaaacagatcttcagCCACATGGTGCTTATGGGTATCAGTTTCAACATCCCCCATGGATACAAAAATCCATGGatgcctaatacaatgtaaatgctatgtaaatagttgttaaactgtattgtttagggaatggtgacaaagaaaaaaaagtctgtatatgttcaatacagacacaaacatcctttattccctaaaattcttgatccagttgtttgaatcgtggatgtggaactcacagattcaatgggccaactgtatgtacaatagaatattattcagctcccctccc---aaaaaatttgccatttgcaacaacatggatgaacgctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcctttacatttgaaatccaaagttgaact-catagaaatgtagagtaaaaaagtggttgcaaggagctggtcaatggcagaaataaagatattttggacagagggtacaaaatttggttataagatgaacaagttgtggagatctaaagtaaaacattgtaactatagttaatactaatgtattattgtacacttgagattgcttaaaaaatagatcttaaatgttctcacaacaaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatgtatcaaaatgtcac---attatacaagac----tatatacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaaaactcattatgataaatggcatatacaaaagcccttcagctaatattatacttaatggtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagacgattcaataaggcaaaataagagaaaaagaaaaagaaaaagaaaaacattaaaccttctataatgaaaagaaagaagtaaacctgtctttatttgctgatgacacaatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcaaaaggtggcagaatacacacttagtatacaaaattttactctatctttctatacTAAT--------T-TAAAAAAAAAAATTGAggccaggcactgtggctcatgcctgtaatctcaacactttagcaggaggctgagggaggaggatcatttgacgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac---aaaaaaaattttaagttagccag-cttagtggaatgtacctgtagccccagctacacaagaagctgagtttagaaaagtgctttcactcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAActcccacttactgcaaatgctagcaaagaggccagcactcctgcaactgccagtactctaccacagccaaagagcgcatactctgctgtactgctattgatgctggtatgtgtgaatgaggatggactttgctgtcaccactctacaaattgttctttggctggcaacacccaccagagtgttgtgaccagcagtccaggaataccttg-gcc------------cccccagtgcagcaggttcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagagggcatagtccagaagtcttgagcagagtctcggccctcaaaagtcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaaccaccaaggacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctacgtcaaagcttcaaagaacatcagcccacagagatgagaaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcacgcgaatttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacccaatccaagcaatctaaggattacaataaaacaatataggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcata--------------atgcaatcacatgtattaacagcagaattggccaagctgaggaaagaatcgaggaaagaatctcagggcttgaagactctctctaaaacaactcagccagagaaaaa--ctaaaaaaa-aaataaagaatgaacaaaacctctgagaaatatgacattatgagaagaaccccattatatgattcactggcatatgtgaaagaaaggaagagaaactaacca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162292262 3035 - 192294377 agctggaaggcattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagccgaatgatgagaacacatggacacaaggaggggaacaacacacacttgaggggcctgatgagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcatacctaggtgatgggttgatagatgtagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaTTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactaaaaatatagga---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaattgactggcatgaatcaagagtacatttgagatgatagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggagaactaaaaaaagaaacagatcttcagCCACATGGTGCTTATgggtatcagtttcaacatctcccatggatacaaaaatccatggatgcctaatacaatgtaaatgctatgtaaatagttgttaaactgtattgtttagggaatggtgacaaagaaaaaaaagtctatatatgttcaatacagacacaaacatcctttattccctaaaattcttgatccagttgtttgaatcgtggatgtggaactcacagattcaatgggccaactgtatgtacaatagaatattattcagcccccctccc---aaaaaatttgccatttgcaacaacatggatgaaccctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcctttacatttgaaatccaaagttgaact-catagacatgtagagtaaaaaagtggttgcaaggagctggtcaatggcagaaataaagatattttggacagagggtacaaaatttggttataagatgaacaagttgtggagatctaaagtaaaacattgtaactatagttaatactaatgtattattgtacacttgagattgcttaaaaaatagatcttaaatgttctcacaacaaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatgtatcaaaatgtcac---attatacaagac----tatatacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaaaactcattatgataaatggcatatacaaaagcccttcagctaatattatacttaatggtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccaccactacttcctctattcaataatgtactggcagttccagacgattcaataaggcaaaataagagaaaaagaaaaagaaaaagaaaaacattaaaccttctataatgaaaagaaagaagtaaacctgtctttatttgctgatgacacaatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcaaaaggtggcagaatacacacttattatacaaaattttactctatctttctatacTAAT--------TAAAAAAAAAAAAATTGAggccaggcactgtggctcatgcctgtaatctcaacactttagcaggaggctgagggaggaggatcatttgacgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac---aaaaaaaattttaagttagccag-cttagtggaatgtacctgtagccccagctacacaagaagctgagtttagaaaagtgctttcactcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAACTCCCGCTTACTGCAAATGCTAGCAAAGAGGCCAGCACTCCTGCAACTGCCAGTACTCCACCACAGCCAAAgagcgcatactctgctgtactgctattgatgctggtatgtgtgaatgaggatggactttgctgtcaccactctacaaattgttctttggctggcaacacccaccagagtgttgtgaccagcagtccaggaataccttg-gcc------------cccccaatgcagcaggttcctaaccctgagaggccagaggacaaagccagggacccaataccagtcctccagagttagagggcatagtccagaagtcttgagcagagtctcggccctcaaaagtcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaaccaccaaggacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctacgtcaaagcttcaaagaacatcagcccacggagatgagaaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcacgctaatttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacccaatccaagcaatctaaggattacaataaaacaatataggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcata--------------atgcaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagggcttgaagactctctctaaaacaactcagtcagagaaaaattttaaaaaaatacataaagaatgaacaaaacctctgagaaatatgacattatgagaagaaccccattatatgattcactggcatatgtgaaagaaaggaagagaaactaacca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8773029 3033 + 9440265 agctggaaggcattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagccgaatgatgagaacacatggacacaaggaggggaacaacacacacttgaggggcctgatgagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcatacctaggtgatgggttgatagatgtagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaTTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactaaaaatatagga---aaagaaatgcaaattatgaggttgaaaagtataataactgaaatgaaaaattgactggcatgaatcaagagtacatttgagatgatagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtgtaaagagtttgggaggagaactaaaaaaagaaacagatcttcagCCACATGGTGCTTATGGGTATCATTTTCAACATCCCCCATGGATACAAAAATCCATGGatgcctaatacaatgtaaatgctatgtaaatagttgttaaactgtattgtttagggaatggtgacaaagaaaaaaaagtctgtatatgttcaatacagacacaaacatcctttattccctaaaattcttgatccagttgtttgaatcgtggatgtggaactcacagattcaatgggccaactgtatgtacaatagaatattattcagcccccctccc---aaaaaatttgccatttgcaacaacatggatgaaccctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcctttacatttgaaatccaaagttgaact-catagaaatgtagagtaaaaaagtggttgcaaggagctggtcaatggcagaaataaagatattttggacagagggtacaaaatttggttataagatgaacaagttgtggagatctaaagtaaaacattgtaactatagttaatactaatgtattattgtacacttgagattgcttaaaaaatagatcttaaatgttctcacaacaaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatgtatcaaaatgtcac---attatacaagac----tatatacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaaaactcattatgataaatggcatatacaaaagcccttcagctaatattatacttaatggtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagacgattcaataaggcaaaataagagaaaaagaaaaagaaaaagaaaaacattaaaccttctataatgaaaagaaagaagtaaacctgtctttatttgctgatgacacaatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcaaaaggtggcagaatacacacttagtatacaaaattttactctatctttctatacTAAT--------TAAAAAAAAAAAAATTGAggccaggcactgtggctcatgcctgtaatctcaacactttagcaggaggctgagggaggaggatcatttgg-gtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac--aaaaaaaaattttaagttagccag-cttagtggaatgtacctgtagccccagctacacaagaagctgagtttagaaaagtgctttcactcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAActcccgcttactgcaaatgctagcaaagaggccagcactcctgcaactgccagtactccaccacagccaaagagcgcatactctgctgcactgctattgatgctggtatgtgtgaatgaggatggactttgctgtcaccactctacaaattgttctttggctggcaacacccaccagagtgttgtgaccagcagtccaggaataccttg-gcc------------cccccagtgcagcaggttcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagagggcatagtccagaagtcttgagcagagtctcggccctcaaaagtcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaaccaccaaggacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctacgtcaaagcttcaaagaacatcagcccacggagatgagaaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcacgctaatttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacccaatccaagcaatctaaggattacaataaaacaatataggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcata--------------atgcaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagggcttgaagactctctctaaaacaactcagtcagagaaaaa--ttaaaaaaataaataaagaatgaacaaaacctctgagaaatatgacattatgagaagaaccccattatatgattcactggcatatgtgaaagaaaggaagagaaactaacca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8502960 3033 + 21915920 agctggaagacattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagctgaaagatgagaacacatggacacaaggaggggaacaacacacacttgaggggcctgatgagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcatacctaggtgatgggttgatagatgtagcaagccaccatggcacacatttacctatgtaactaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaTTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactgaaaatatagga---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaattgactggcatgaatcaagagtacatttgagatgatggcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctaagtttaaagagtttgggaggagaactaaaaaaagaaacagatcttcagCCACATGGTGTTTATGGGTATCAGTTTCAACATCCCCCATGGATACAAAAATCCATGGATGCC--ATTcaatgtaaatgctacgtaaatagttgttaaactgtattgtttagggaatggtgaca---gaaaaaaagtctgtatatgttcaatacagacacaaacatcctttattccctaaaattcttgatccagttgtttgaattgtggatgcagaactcacagattcaatgggccaactgtatgtacaatagactattattcagcacccct--c---aaaaaatttgccatttgcaacaacatggatgaac-ctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcctttacatttgaaatccaaagttgatttgtatagaaatgtagagtaaaaaagtggttgcaaggagttggtcaatggtagaaataaagatattttggacagagggtacaaaatttggttataagatgaacaagttgtggagatctaaagtaaaacattgtaactatagttaatattaatgtattatcgtacacttgaaattgcttaaaaaatagatcttaaatgttctcacaacaaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacactacaatgtatacatgtatcaaaatgtcac---attatacaagactaaatatatacaatctttatttgtcaatAATGACTATATTATATATATTAAAGTaactaggaatataaaaactcattatgataaatagcatatacaaaagcccttcagctaatattatacttaatagtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttctactactacttcctctattcaataatgtactggcagttccagatgattcaataaggcaaaataagagaaaaagaaaaagaaaaagaaaaaaattaaaccttctctaatgtaaagaaagaagtaaacctgtctttatttgctgatgacacaatcctgtttgtgaaaattcctgaggaatacacaaaaactgccagaactaataagttcaaatgttgacagaatacacacttagtatacaaaactttactctatctttctatactaat------------aaaaaaaaaatcgaggccaggcattgtggctcacacctgtaatctcaacactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctac--aaacaaaatttttaagttagccagccttagcggaatgtacctgtagccccagctactcaggaagctgagtttagaaaaatgcttgcgctcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAACACccgcttactgcaaacactagcaaagaggccagcactcctgcaactgccagtactccaccacagccaaagagcgcatactctgctgtactgctattgatgctggtatgtgtgaatgaggatggactttgctgtcaccactctacaaattgttctttgcctggcaacacccaccagagtgttgtgaccagcagtccaggaataccttg-gcc------------cccccagtgcagcaggttcctaaccctgaggggccagaggacaaagccagggacccaataccagtcctccagcgttagagggcatagtccagaagtcttgagcagagtcttggccctcaagagtcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaaccaccaaggacatctaat-aaataaaatgagaagaaaaccatccaaagcatagctatgtcaaagcttcaaagaacatcagcccacggagatgagaaagaaccagcacaagaactctgg-----caaaaatccagagtgtcttcttacctccaaatgatcacgctaatttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacccaatccaagcaatctaaggattacaataaaacaatataggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcataatgcaatcacaagtatgcaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagggcttgaagactccctctaaaacaactcagtcagagaaaaatttttaaaaaa------aataatgaacaaaacctctgagaaatatgacattatgagaagaaccccattatatgattcactggcatatgtgaaagaaaggaagagaaactaacca i cerAty1.NW_012002954v1 C 0 I 14 s chlSab2.chr2 15076579 3023 - 90373283 agctggaaggcattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagccgaatgatgagaacacatggacgcagagaggggaacaacgcatacttgaggggcctgacaagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcgtacctaggtgatgggttgatagatgtagcaagccaccatggcacacattcacctatgtagcaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaCTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attaccaaatagcatctgaggttgaaaactgaaaatataaga---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaattgactggcatgaatcaagagtacatttgagatgacagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtttaaagagtttgggaggaaaactaaaaaaagaaatagatcttcagCCACGTGGTGTTTATgggtatcagtttcaacatcccccatggatacaaaaatccatggatgcctaatacaatgtaaacgctacgtaaatagttgttaaactgtattgtttagggaatggtgacc---aaaaaaaagtctgtatatgttcagtacagacacaaacatcctttttcccctaaaattcttgatccagttgtttgaatcgtgggtgcgaaactcacagattcaatgggccaactgtatgtacaatagaatattattcagcccccccccc----aaaaatttgccatttgcaacaacatggatgaac-ctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcatcatctcctttacatttgaaatccaaagttgaact-catagaaatgtagagtaaaaaagtggttgcaaggagatggtcaatggcagaaataaagatattttggacagagggtacaaaatttggttataagatgaataagttctggagatctaaagtaaaacattgtaaccataattaatattaatg---tattgtacacttgaaattgcttaaaaaatagatcttaaatgttctcacaacaaaaaatatta-taatataaggtgatgg--ttgttaattgtggtaatcacattacaatgtatacatgtatcaaaatatcac---attatacaagactaaatatatacaatctttatttgtcaatAATGACTGTATTCTATATATTAAAGTaactaggaatataaaaacttatcatgataaatggcatatacaaaagcccttcagctactattatacttaatagtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagacgactcaataagacaaaataagagaaaaagaaaaagaaaaagaaaaaaatcaagccttctataacgaaaagaaggaagtaaacctgtctttatttgctgatgacacaatcctgtttgtgaaaattccttaggaatacacaaaaactgccagaactaataagttcaaaaggtggcagaatacacacttagtatacagaactttactctatctttctatactaat----------aaAAAAAAAAAATCGAggccaggcattgtggctcacacctgtaatctcagcactttagcaggaggctgaaagaggaggatcatttgatgacagaagtctgagatctgctggaataacaaagtgacaccccatctctac--aaacaaaatttttaagttagccagccttagtggaatgtacctgtagccccagctactcaggaagctgagtttagaaaaatgctcgtgctcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAATACCCACTtgctgcaaatgctagcaaagaggccagcactcctgcaacggccagtactccaccacagccaaagagcgcatactctgctgtactgctatcgatgctggtatgtgtgaatgaggatggactttgctgtcaccactctacaaattgttctttggctggcaacacccaccagagtgctgtgaccagcagtccaggaatacctcg-gcc------------cccccagtgcagcagtttcctaa-cctgaggggccagaggacaaagccagggacccaataccagtcctccagagttagagggcatggtccagaagtcttgagcagagtcttggtcctcaaaagtcttccagaaatgaagccagtttactgaacccacctcgcactacaatcaaaccgccaaggacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctacgtcaaagcttcaaagaacatcagcccacggagatgagaaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcacactaatttcctagcaatggttcttaatcaggctgagatgactgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacgcaatccaagcaatctaaggattacaataaaacaatacaggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcata--------------atacaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagggcttgaagactctctctaaaacaactcagtcggagaaaaa--ttt-aaaaa-aaataaagaatgaacaaaacctctgagaaatatgacattatgaaaagaaccccattatatgattcactagcatatgtgaaagaaaggaagagaaactaacca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2261798 3035 + 4234846 agctggaaggcattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctc-----taagtgggagacgaatgatgagaacacatggacacaaggaggggaacaacacacacttgaggggcctgacgagtggctggggtgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcatacctaggtgatgggttgatagatgtagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaTTTGTTTCAAAGAAAAGATAATTACAGTCACATCTGGGGTATCTTTTCTGGAGAGCaaagaataaaattgtgataacaa---attatcaaatagcatctgaggttgaaaactgaaaatataaga---aaagaaatgcaaattatgaggttgaaaagtacaataac--aaatgaaaaattgactggcatgaatcaagagtacatttgagatgatagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtttaaagagcttgggaggagaactaaaaaaagaaacagatcttcagCCACATGGTGCTTATGGGTATCAGTTTCAACATCCCCTATGGATACAAAAATCCATGGatgcctaatacaatgtaaatgctacataaatagttgttaaactgtattgtttagggaatggtgacc---aaaaaaaagtctgtatatgttcaatacagacacaaacatccttttttccctaaaattcttgatccagttgtttgaatcgtggatgcagaactcacagattcaatggtccaactgtatgtacaatagactattattcagctccccccccaaaaaaaaatttgccatttacaacaacatggatgaac-ctagaggac---atgctaagtgaaataagccagacacaaaaag-aaaatactgcataatctcctttacgtttgaaatccaaagttgaact-catagaaatgtagagtaaaaaagtggttgcaaggagctggtcaatggcagaaataaagatattctggacagagggtacaaaatttggttataagatgaacaagttgtggagatctaaagtaaaacattgtaactatagtttatattaatgtattattgtacacttgaaattgcttaaaaaatagatcttaaatgttctcacaacaaaaaatagtatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatgtatcaaaatgtcac---attacataagactaaatatatacaatctttatttgtc---aatGACTATATTATATATATTAAAGTCactaggaatataaaaactcattatgataaatggcatatacaaaagcccttcagctaatattatacttaatggtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagatgattcaataaggcaaaataag------agaaaaagaaaaagaaaaaaattaaaccttctataatgaaaagaaagaagtaaacctgtctttatttgctgatgacacaatcctgtttgcgaaaattccttaggaatacacaaaaactgccagaactaataagttcaaatgttgacaaaatacacacttagtatacaaaactttactctatctttctatactaat---------aaAAAAAAAAAAATCAAggccaggcattgtggctcacacctgtaatctcaacacttcagcaggaggctgagggaggaggatcatttgacgtcagaagtctgagatctgctggagcaacaaagtgacaccccatctctacaaaaaaaaaaaatttaagttagccag-ctcagtggaatgtacctgtagccccagctacacaggaagctgagtttagaaaagtgctttcactcaggagtttgaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAACACCcccttactgcaaatgctagcaaagaggccagcactcctgcaactgccagtactccaccacagccaaagagcgcatactctgctgtactgctgttgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctacaaattgttctttggctggcaacacccaccagagtgttgtgaccaacagtccaggaacaccttgtgccaccacccccccacccccagtgcagcaggttcctaaccctgaggggccagagaacaaagccagggacccaataccagtcctccagagttagagggcatggtccagaagtcttgagcagagtcttggccctcaaaagtcttccagaaatgaagccagtttactgaacccacctcaaactacaatcaaaccaccaaggacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctacatcaaagcttcaaagaacatcagcccacagagctgaggaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaacgatcacactaatttcctagcaatggttcttaatcaggctgagatggctgaaatgatagaaatagaattcagaatatggacagaaacaaagatcactgacatacaggagaaagtgaaaacccaatccaagcaatctaaggattacactaaaacgatataggagctggtagataaaatggccattaaaagaaagaacaaaactggtctgatagagctgaaagacatactacaagaatttcata--------------atgcaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagcgcttgaagactttctctaaaacaactcagtcagagaaaaa--tttaaaaaa-aaataaagaatgaacaaaacctctgagaaatatgacattatgaaaagaaccccattatatgattcactggcatatgtgaaagaaaggaagagaaactaacca i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 260938 3003 - 13750039 agctggaagccattatcctcagcaaagtaatgcaggaaaagaaaatcaaacaccacatgttctg-----taagtgggagctgaacgatgagaacacatggacacaggaaggggaacaacacacacttgaggggcctgacaagtggctttggcgggggaaggaaagcattagaaaaaattgctaatgcatggtgggcttcatacctaggtgatgggttgacagatgcagcaagccaccatggcacacatttacctatgtaacaaacctgcatattctgcacatgtacacccagaacttaaaataaaaataaaaTTTGTTTCAAAGAAAAGATAATTGCAGTCACATCTGGGGTATCTTTTCTGGAGAGCAAAGAATAAAATTGTGATAACAA---ATTATCAAATAGCATCTGAGGTTGAaaactgaaaat-----a---aaagaaatgcaaattatgaggttgaaaagtacaataactgaaatgaaaaat----tggcatgaatcaagagtacatttgagatgatagcacaaggaataagtaaacttaaaagtagatcaatataaatcatttaatctgagtttaaagagcgtgggaggagaactaaaaaaagaagcagatcttcagCCACATGGTGCTTATGGGTATCAATTTCAACATCCCCCATGGATACAAAAATCCATGGatgcctaatacaatgtaaatgctacgtaaatagttgttacactgtattgtttagggaatggtaac----aaaaaaaagtctgtatatgttcaatacagacacaaacatccttttttccctaaaattcttgatccagttgtttgaatcatggatgtggaactcacagattcaatgggccaactgtatgtacaatagtatattattcagctcccccccc--aaaaaaaattgccatttgccacaacatggatgaac-ctagaggacattatgctaagtgaaataagccagacacaaaaagaaaaatactgcataatctcctttacatttgaaatccaaagttgaact-cgtagaaacgtagagtaaaacagggattgcaaggagttggtcaatggcagaaataaagatattttggacagagggtacaaaatttggttataagatgaacaagtgctggagatctaaagtaaaacattgtaactatagttaatattaatgtattatcgtacacttgaaattgctttaaaaatagatcttaaatgttctcacaacaaaaaataatatttatataaggtgatgaatatgttaattgtggtaatcacattacaatgtatacatgtatcaaaatgtcac---attatacaagactaaatatacccaatctttatttgtcaatAATGACTATATTACATATATTAAAGCaactaggaatataaaaactcattatgataaatggcacatacaaaagcccttcagctaatattacacttaatagtaaaagattgaatgctttcttcttaatggagggaacaaaccaatgatttccactactacttcctctattcaataatgtactggcagttccagatgattcaataaggcaaaataagagaaaaagaaaaagaaaaagaaaaaaattaaaccttctataatgaaaagaaagaagtaaacctgtctttatttgctgatgacacaatcctgcttgtgaaaattccttaggaatacacaaaaactgtcagaactagtaagttcaaaaggtggcagaatacacacttagtatacaaaactt-----tatctttctatacTAAT---------AAAAAAAAAAAAATCGAggccaggcattgtggctcacacccgtaatctcaacactttagcaggaggctgagggaggaggatcatttgatgtcagaagtctgacatctgctggagtaacaaagtgacaccccatctctac--aaacaaaagttttaagttagccagccttagtggaatgtacctgtagccccagctactcaggaagctgagtttagaaaaatgcttgtgctcaggagttttaggctgcagtgagccataattgtgccactgtactTTTGTTCACTGCCTGCATCCTAACACCcccttactgcaaatgctagcaaagaggccagcactcctgcaactgccagtactccaccacagccaaagagtgcatactctgctgtactgctattgatgctggtatgtgtgaatgaggatggattttgctgtcaccactctaccaa--------tggctggcaacacccaccagagtgttgtgaccagtagtccaggaatactttg-gcc------------cccccagtgcagcaggttcctaa-cctgaggggccagaggacaaagccagagacccaataccagtcctccagagttagagggcatggtccagaagtcttgagcagagtcttggccctcaaaagtcttccagaaatgaagccagtttactgaacccacctcacactacaatcaaaccaccaaggacatctaat-aaataaaatgagaagaaaaccatccaaaggatagctatgtcaaagcttcaaagaacatcagcccacagagatgaggaagaaccagcacaagaactctggcaactcaaaaatccagagtgtcttcttacctccaaatgatcacactaatttcctagcaatggttcttaatcaggctgagatggctgaaatggtagaaatagaattcagaatatggacagaaacaaagatcactgacatgcaggagaaagtgaaaacccaatccaaggaatctaaggattacaataaatctatacaggagctggtagataaaatggccattaaaagaaagaacaaaagtaatctgatagagctgaaagacatactacaagaatttcata--------------atgcaatcacaagtattaacagcagaattggccaagct------------gaggaaagaatctcagggcttgaagact--ctctaaaacaactca----gagaaaaatttttaaaaaa----taaagaatgaacaaaacctctcagaaatatgacattatgaaaagaaacccattatatgattaactggcatgtgtgaaacaaaggaagagaaactaacca i colAng1.NW_012120598v1 C 0 C 0 a score=36255.000000 s hg38.chr21_KI270874v1_alt 147151 8 + 166743 gcttggaa s panTro5.chr21 3773658 8 + 33445071 acttggaa i panTro5.chr21 C 0 C 0 s panPan2.chr21 17399042 8 + 46275980 acttggaa i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3337930 8 - 13858734 acttggaa i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4517950 8 + 32716333 acttggaa i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155471098 8 - 185818997 agttggaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162295297 8 - 192294377 acttggaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8776062 8 + 9440265 agttggaa i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr2 15079602 8 - 90373283 acttggaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2264833 8 + 4234846 acttggaa i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 263941 8 - 13750039 acttggaa i colAng1.NW_012120598v1 C 0 C 0 e cerAty1.NW_012002954v1 8505993 14 + 21915920 I a score=3557705.000000 s hg38.chr21_KI270874v1_alt 147159 636 + 166743 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaatattcaaattcagaaaatttagagaatccctgtgaaatactaaacaagaagaccatccccaagacatatagtcatcagattctccaaggtcaaaatgaaagaaaacctgacaagaaagct-agagagaaagtgcaggctgcctactgatatggtttggctgtgttcccacccaaatctcatcttgaattgt-actccta-taatccctatatgttgtgggagggacctggtgggagataattgaatcacgaaggcaggttttcccatgctgtcctcaagacagtgaataagtctcacgagatctgatggttttataaatggcagttccctggcacatgctgtcttgcctgctgccatgtaagatgtgtcttttctcctccttcaccttctgccataattgtgaggtctccccagccatgtggaactgtgagtccattaaaccatttttttaataaattatccagtcttgggcatttcttcataacagtatgaaaatggactaatacatctacaaatagaaccctaccaggctaacagcagacccgttagcagaaaccctacaagccagaagagatgggggttc s panTro5.chr21 3773666 636 + 33445071 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaatttagagaatccctgtgaaatactaaacaagaagaccatccccaagacatatagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaagct-agagagaaagtgcaggttgcctactgatatggtttggctgtgtccccacccaaatctcatcttgaatcgt-actccta-taatccctatatgttgtgagagggacctggtgggagataactgaatcatgaaggcaggttttcccatgctgtcctcatgacagtgaataagtctcacgagatctgatggttttataaatggcagttccctggcacatgctgtcttgcctgctgccatgtaagatgtgccttttctcctccttcactttctgccataattgtgaggcctccccagccatgtggaactgtgagtccattaaaccatttttttaataaattacccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaatagaaccctaccaggctaacagcagacccgttagcagaaaccctacaagccagaagagatgggggttc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17399050 636 + 46275980 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaatttggagaatccctgtgaaatactaaacaagaagaccatccccaagacatatagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaagct-agagagaaagtgcaggttgcctactgatatggtttggctgtgtccccacccaaatctcatcttgaattgt-actccta-taatccctatatgttgtgagagggacctggtgggagataactgaatcatgaaggcaggttttcccatgctgtcctcatgacagtgaataagtctcacgagatctgatggttttataaatggcagttccctggcacatgctgtcttgcctgctgccatgtaagatgtgccttttctcctccttcactttctgccataattgtgaggcctccccagccatgtggaactgtgagtccattaaaccatttttttaataaattacccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaatagaaccctaccaggctaacagcagacccgttagcagaaaccctacaagccagaagagatgggggttc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3337938 636 - 13858734 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaatttagagaatccctgtgaaatactaaacaagaagaccatccccaagacatatagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaagct-agagagaaagtgcaggttgcctactgatatggtttggctgtgtccccacccaaatctcatcttgaattgt-actccta-taatccccatatgttgtgggagggacctggtgggagataattgaatcatgaaggcaggttttcccatgctgtcctcatgacagtgaataagtctcacaagatctgatggttttataaatggcagttccctggcacatgctgtcttgcctgctgccatgtaagatgtgccttttctcctccttcaccttctgccataattgtgaggcgtccccagccatgtggaactgtgagtccattaaaccatttttttaataaattacccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaacggaaccctaccaggctaacagcagacccgttagcagaaaccctacaagccagaagagatgggggttc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4517958 638 + 32716333 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaatttagagaatccttgtgaaatattaaacaagaagaccatccccaagacatatagtcatcagattctccgaggtcaaaatgaaagaaaacctgataagaaagct-agagagaaagtgcaggttgcctactgatatggtttggctgtgtccccacccaaatctcatcttgaattgtaactcctattaacccccacatgttgtcggagggacctggtgggagataattgaatcatgaaggcaggttttcccatgctgttctcatgatagtgaataagtctcacgagatctgatggttttgtaaatggcagttccctggcacatgctctcttgcctgctgccatgtaagatgtgccttttctcctccttcaccttctgccataattgtgaggcctccccagccatgtggaactgtgagtccattaaaccatttttttaataaaatacccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaacagaacccaaccaggctaacagcagacctgttagcagaaaccctacaacccagaagagatgggggttc i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155471106 621 - 185818997 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacatttaaattcagaaaattgagagaatctctgagaaatactaaacaagaagaccatccccaatacatagagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaag-t-agagagaaagtgcaggttgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgtaactccta-taatccccacatgttgtgggagg--------------taattgaatcatgaaggcaggttttcccatgctattctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagtttcctggcagatgctctcttgcctgctgccatgtaagatgtgccttttcttctccttcaccttctgccataattgtgaggcctccctagccatgtggaattgtgagtccattaaacca-ttttttaataaattgcccagtcttgggtatttattcataacagtatgaaaatggactaataaatctacaaatagaatcctaccaggctaacagcagaccccttagcagaaaccctgcaagccagaagagatgggggttc i rheMac8.chr3 C 0 I 4 s macFas5.chr3 162295305 621 - 192294377 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacatttaaattcagaaaattgagagaatctctgagaaatactaaacaagaagaccatccccaatacatagagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaag-t-agagagaaagtgcaggttgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgcaactccta-taatccccacatgttgtgggagg--------------taattgaatcatgaaggcaggttttcccatgctattctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagttccctggcagatgctctcttgcctgctgccatgtaagatgtgccttttcttctccttcaccttctgccataattgtgaggcctccctagccatgtggaattgtgagtccattaaacca-ttttttaataaattgcccagtcttgggtatttcttcataacagtatgaaaacggactaataaatctacaaatagaatcctaccaggctaacagcagaccccttagcagaaaccctgcaagccagaagagatgggggttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8776070 621 + 9440265 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacatttaaattcagaaaattgagagaatctctgagaaatactaaacaagaagaccatccccaatacatagagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaag-t-agagagaaagtgcaggttgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgtaactccta-taatccccacatgttgtgggagg--------------taattgaatcatgaaggcaggttttcccatgctattctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagttccctggcagatgctctcttgcctgctgccatgtaagatgtgccttttcttctccttcaccttctgccataattgtgaggcctccctagccatgtggaattgtgagtccattaaacca-ttttttaataaattgcccagtcttgggtatttcttcataacagtatgaaaatggactaataaatctacaaatagaatcctaccaggctaacagcagaccccttagcagaaaccctgcaagccagaagagatgggggttc i macNem1.NW_012019910v1 C 0 I 4 s cerAty1.NW_012002954v1 8506007 622 + 21915920 atcatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacatttaaattcagaaaattgagagaatctctgagaaatactaaacaagaagaccatccccaatacatagagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaagct-agagagaaagtgcaggttgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgtaactccta-taatctccacatgttgtgggagg--------------tagttgaatcatgaaggcaggttttcccatgctgttctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagttccctggcagatgctctcttgcctgctgccatgtaagatgtgccttttcttctccttcaccttctgccataattgtgaggcctccctagccatgtggaattgtgagtccattaaacca-ttttttaataaattgcccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaatagaatcctaccaggctaacagcagaccccttagcagaaaccctgcaagccagaagagatgggggttc i cerAty1.NW_012002954v1 I 14 I 4 s chlSab2.chr2 15079610 622 - 90373283 aacatttttcaggatattgtccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaattgagagaatctctgcgaaatactaaacaagaagaccatccccaatacatagagtcatcagattctccaaggtcaaaatgaaagaaaacctgataagaaag-ctagagggaaagtgcagattgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgtaactccta-taatccccacatgttgtgggagg--------------taattgaatcatgaaggcaggttttcccatgctgttctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagttccctgacagatgctctcttgcctgctgccatgtaagatgtgccttttcttctccttcaccttctgccataattgtgaggcctccctagccatgtggaattatgagtccattaaacca-ttttttaataaattgcccagtcttgggtatttcttcataacagtatgaaaatggactactacatctacaaacagaatcctaccaggctaacagcagaccccttagcggaaaccctgcaagccagaagagatgggggttc i chlSab2.chr2 C 0 I 4 s manLeu1.NW_012102865v1 2264841 621 + 4234846 aacatttttcaggatattatccataaaaatttccccaaccacactagagaagccaacattcaaattcagaaaattgagagaatccctgcgaaatactaaacaagaagaccatccccaatacatagagtcaccagattctccaaggtcaaaatgaaagaaaacctgataagaaag-c-agagagaaagtgcaggttgcctgctgatgtggtttggctgtgtccccacccaaatctcatcctggattgtaactccta-taatcctcatatgttgtgggagg--------------taattgaatcatgaaggcaggttttcccatgctattctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagttccctggcagatgctctcttgcctgctgccatgtaagatgtgccttttcctctccttcaccttgtgccataattgtgaggcctccctagccatgtgaaattgtaagtccattaaacca-ttttttaataaattgcccagtcttgggtatttcttcataacagtatgaaaatggactaatacatctacaaatagaatcctaccaggctaacagcagaccctttagcagaaaccctgcaagccagaagagatgggggttc i manLeu1.NW_012102865v1 C 0 I 4 s colAng1.NW_012120598v1 263949 620 - 13750039 aacatttttcaggatattgtccataaaaattttcctaaccacactagagaagcc-acattcaaattcagaaaattgagagaatccctgtgaaatact-aacaagaagaccatccccaagacatatagtcatcagattctccaaggtcaaaatgaaagaacacctgataagaaagct-agagagaaagtgcaggttgcctgctgatatggtttggctgtgtccccacccaaatctcatcctggattgtaactccta-taatccccacatgttgcgggaag--------------taattgaatcatgaaggcaggttttcccatgctgttctcatgatagtgaataagtctcaagagatctgatggttttataaatggcagctccctggcacatgctgtcttgcctgctgccatgtaagatgtgccttttctcctccttcaccttctgccataattgtgagacctccctagccatgtggaattgtgagtccattaaacca-tgttttaataaattgcccagccttgggtatttcttcatagcagtatgaaaatggactaatacatctacaaatagaatcctaccaggctaacagcagacccattagcagaaaccctgcaagccagaagagatgggggttc i colAng1.NW_012120598v1 C 0 C 0 a score=2611.000000 s hg38.chr21_KI270874v1_alt 147795 2 + 166743 ta s panTro5.chr21 3774302 2 + 33445071 ta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17399686 2 + 46275980 ta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3338574 2 - 13858734 ta i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4518596 2 + 32716333 ta i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162295926 2 - 192294377 ca i macFas5.chr3 C 0 C 0 s colAng1.NW_012120598v1 264569 2 - 13750039 ca i colAng1.NW_012120598v1 C 0 C 0 e cerAty1.NW_012002954v1 8506629 4 + 21915920 I e macNem1.NW_012019910v1 8776691 4 + 9440265 I e manLeu1.NW_012102865v1 2265462 4 + 4234846 I e chlSab2.chr2 15080232 4 - 90373283 I e rheMac8.chr3 155471727 4 - 185818997 I a score=215.000000 s hg38.chr21_KI270874v1_alt 147797 2 + 166743 ta s nomLeu3.chr25 4518598 2 + 32716333 ta i nomLeu3.chr25 C 0 C 0 s macFas5.chr3 162295928 2 - 192294377 tt i macFas5.chr3 C 0 C 0 s colAng1.NW_012120598v1 264571 2 - 13750039 tg i colAng1.NW_012120598v1 C 0 C 0 e cerAty1.NW_012002954v1 8506629 4 + 21915920 I e macNem1.NW_012019910v1 8776691 4 + 9440265 I e manLeu1.NW_012102865v1 2265462 4 + 4234846 I e chlSab2.chr2 15080232 4 - 90373283 I e rheMac8.chr3 155471727 4 - 185818997 I e gorGor5.CYUI01015003v1 3338576 0 - 13858734 C e panPan2.chr21 17399688 0 + 46275980 C e panTro5.chr21 3774304 0 + 33445071 C a score=3113.000000 s hg38.chr21_KI270874v1_alt 147799 12 + 166743 ttcagtattctt s nomLeu3.chr25 4518600 12 + 32716333 ttcagtactctt i nomLeu3.chr25 C 0 I 368 s colAng1.NW_012120598v1 264573 12 - 13750039 ttcagtattctt i colAng1.NW_012120598v1 C 0 I 2784 e cerAty1.NW_012002954v1 8506629 4 + 21915920 I e macNem1.NW_012019910v1 8776691 4 + 9440265 I e manLeu1.NW_012102865v1 2265462 4 + 4234846 I e chlSab2.chr2 15080232 4 - 90373283 I e macFas5.chr3 162295930 0 - 192294377 C e rheMac8.chr3 155471727 4 - 185818997 I e gorGor5.CYUI01015003v1 3338576 0 - 13858734 C e panPan2.chr21 17399688 0 + 46275980 C e panTro5.chr21 3774304 0 + 33445071 C a score=0.000000 s hg38.chr21_KI270874v1_alt 147811 1741 + 166743 TTTTTttttttttttaatttatttttttattgataattcttgggtgtttctcacagagggggatttggcagggtcatgggacaatagtggagggaaggtcagcagataaacaagtgaacaaaggtctctggttttcctaggcagaggaccctgcggccctccgcagtgtttgtgtccctgattacttgagattagggattggtgatgactcttcacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccgcccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttgggggtaaggtcacagatcaacaggatcccaaggcagaggaatttttcttagtgcagaacaaaatgaaaagtctcccatgtctacttctttctacacagacacggcaaccatccgatttctcaatcttttccccacctttcccgcctttctattccacaaagccgccattgtcatcctggcccgttctcaatgagctgttgggcacacctcccagacggggtggtggccgggcagaggggctcctcacttcccagtaggggcggccgggcagaggcgcccctcacctcccggacggggcggctggccgggcgggggggctgtccccccccacctccctcccggacggggcggctggccgggcggggggctgacacccccacctccctcccggacggggtggctgccgggcggagatgctcctcacttcccagatggggtggctgccgggcggagaggctcctcacttctcagacggggcagctgccgggcggaggggctcctcacttctcagacggggtggttgccaggcagagggtctcctcacttctcagacggggcggccgggcagagacgctcctcacctcccagacggggtctcggccgggcagaggcactcctcacatcccagatggggcggcggggcagaggcgctccccacatctcagacgatgggcggccgggcagagacgctcctcacttcctagatgtgatggcggctgggaagaggcgctcctcacttcctagatgggatggcggccgggcggagacgctcctcactttccagactgggcagccaggcagaggggctcctcacatcccagacgatgggcggccaggcagagacgctcctcacttcccagacggggtggcggccgggcagaggctgcaatctcggcactttgggaggccaaggcaggcggctgggaggtgtaggttgtagtgagccgagatcacgccactgcactccagcctgggcaccattgagcactgagtgaacgagaccccgtctgcaatcccggcacctcgggaggctgaggttggcgggatcactcgcggttaggggctggagaccggcccggccaacacagcgaaaccccgtctccaccaaaaccagtcaggcgtggcagcgcgtgcctgcaatggcaggcactcggcaggctgaggcaggagaatcaggcagggaggttgcagtgagccgagatggcagcagtacagtccagcttcggctccgcatgagagggagaccgtggggagagggagacagagggagagggagagggagagccggaaaagTTTCTTGTATAGCCCCGGCTCTTAGAGCCAGGCTCTTCACCCTTATTTTCATAAAGCTGCGATGCATGCTTCATACATAATTGTGCATGTTGCTGCCTCCTTCTCCCAGCTGCCCGACGTGTCATC e colAng1.NW_012120598v1 264585 2784 - 13750039 I e cerAty1.NW_012002954v1 8506629 4 + 21915920 I e macNem1.NW_012019910v1 8776691 4 + 9440265 I e manLeu1.NW_012102865v1 2265462 4 + 4234846 I e chlSab2.chr2 15080232 4 - 90373283 I e macFas5.chr3 162295930 0 - 192294377 C e rheMac8.chr3 155471727 4 - 185818997 I e nomLeu3.chr25 4518612 368 + 32716333 I e gorGor5.CYUI01015003v1 3338576 0 - 13858734 C e panPan2.chr21 17399688 0 + 46275980 C e panTro5.chr21 3774304 0 + 33445071 C a score=1092.000000 s hg38.chr21_KI270874v1_alt 149552 2 + 166743 ta s panTro5.chr21 3774304 2 + 33445071 ta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17399688 2 + 46275980 ta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3338576 2 - 13858734 ta i gorGor5.CYUI01015003v1 C 0 C 0 e colAng1.NW_012120598v1 264585 2784 - 13750039 I e cerAty1.NW_012002954v1 8506629 4 + 21915920 I e macNem1.NW_012019910v1 8776691 4 + 9440265 I e manLeu1.NW_012102865v1 2265462 4 + 4234846 I e chlSab2.chr2 15080232 4 - 90373283 I e macFas5.chr3 162295930 0 - 192294377 C e rheMac8.chr3 155471727 4 - 185818997 I e nomLeu3.chr25 4518612 368 + 32716333 I a score=798168.000000 s hg38.chr21_KI270874v1_alt 149554 204 + 166743 ttcagtattcttaaagaaaagaattttcagccaagaattttatatctagccaaagtaaacttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaacaccaaatgcgttacaaaagatcctgaagggagtgctaaatataggcaggaaagactgctgccagccagtacaaaaacatacttaagta s panTro5.chr21 3774306 204 + 33445071 ttcagtattcttaaagaaaagaattttcagccaagaattttatatccagccgaagtaaacttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaacaccaaatgcgttacaaaagatcctgaagggagtgctaaatataggcaggaaagactgctgccagccagtacaaaaacatacttaagta i panTro5.chr21 C 0 C 0 s panPan2.chr21 17399690 204 + 46275980 ttcagtattcttaaagaaaagaattttcagccaagaattttatatccagccaaagtaaacttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaacaccaaatgcgttacaaaagatcctgaagggagtgctaaatataggcaggaaagactgctgccagccagtacaaaaacatacttaagta i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3338578 203 - 13858734 ttcagtatccttaaagaaaagaattttcagccaagaattttctatccagccaaagtaaacttca-aagcaaataagagccttttcagacaagcaagtgctaagggaattcattaacaccaaatgcgttacaaaagatcctgaagggagtgctaaatataggcaggaaagactgctgccagccagtacaaaaacatacttaagta i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155471731 204 - 185818997 ttcagtattcttaaagaaaataattttcaaccaagaattttatatccagccaaagtaagcttcataagcaaataagagccttttcatacaagcaagtgctaagggaattcattaataccaaatgcattacaaacgatcctgaagggagtgctaaatatggacagaaaagactgctgccagccagtacaaaaacttgcttaagta i rheMac8.chr3 I 4 C 0 s macFas5.chr3 162295930 204 - 192294377 ttcagtattcttaaagaaaataattttcaaccaagaattttatatccagccaaagtaagcttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaataccaaatgcattacaaacgatcctgaagggagtgctaaatatggacagaaaagactgctgccagccagtacaaaaacttgcttaagta i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8776695 204 + 9440265 ttcagtattcttaaagaaaataattttcaaccaagaattttatatccagccaaagtaagcttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaataccaaatgcattacaaacgatcctgaagggagtgctaaatatggacagaaaagactgctgccagccagtacaaaaacttgcttaagta i macNem1.NW_012019910v1 I 4 C 0 s cerAty1.NW_012002954v1 8506633 204 + 21915920 ttcagtattcttaaagaaaataattttcaaccaagaattttatatccagccaaagtaagcttcataagcaagtaagagccttttcagacaagcaagtgctaagggaattcattaataccaaatgcattacaaaagatcctgaggggactgctaaatatggacagaaaagactgctgccagccaggacaaaaacttgcttaagta i cerAty1.NW_012002954v1 I 4 C 0 s chlSab2.chr2 15080236 204 - 90373283 ttcagtattcctaaagaaaataattttcaaccaagaattttacatccagccaaagtaagcttcataagcaaataagagccttttcagacaagcaagtgctaagggaattcattaataccaaatgcattacaaaagatcctgaagggagtgctaaatatgtacagaaaagactgctgccagccagtacaaacacttgcttaagta i chlSab2.chr2 I 4 C 0 s manLeu1.NW_012102865v1 2265466 204 + 4234846 ttcagtattcttaaagaaaataattttcaaccaagaattttatatccagccaaagtaagcttcataagcaagtaagagccttttcagacaagcaagtgctaagggaattcattaataccaaatgcattacaaaagatcctgaagggagtgctaaatatggacagaaaagactgctgccaaccaggacaaaaacttgcttaagta i manLeu1.NW_012102865v1 I 4 C 0 e colAng1.NW_012120598v1 264585 2784 - 13750039 I e nomLeu3.chr25 4518612 368 + 32716333 I a score=115805.000000 s hg38.chr21_KI270874v1_alt 149758 25 + 166743 catggacctgtaatgctataaagct s panTro5.chr21 3774510 25 + 33445071 catggacctgtaatgctataaagct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17399894 25 + 46275980 catggacctgtaatgctataaagct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3338781 25 - 13858734 catggacctgtaatgctataaagct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4518980 25 + 32716333 caaggaccTGTAATGCTATAAAGCg i nomLeu3.chr25 I 368 I 30 s rheMac8.chr3 155471935 25 - 185818997 catggacctgtaatgctttaaagct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162296134 25 - 192294377 catggacctgtaatgctttaaagct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8776899 25 + 9440265 catggacctgtaatgctttaaagct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8506837 25 + 21915920 catggacctgtaatgctttaaagct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15080440 25 - 90373283 catggacctgtaatgctttaaagct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2265670 25 + 4234846 cgtggacctgtaacgctttaaggct i manLeu1.NW_012102865v1 C 0 C 0 e colAng1.NW_012120598v1 264585 2784 - 13750039 I a score=110105.000000 s hg38.chr21_KI270874v1_alt 149783 29 + 166743 accacataaccaagtctgaataataaaca s panTro5.chr21 3774535 29 + 33445071 accacataaccaagtctgaataaaaaaca i panTro5.chr21 C 0 C 0 s panPan2.chr21 17399919 29 + 46275980 accacataaccaagtctgaataaaaaaca i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3338806 29 - 13858734 accacataaccaagtctgaataataaaca i gorGor5.CYUI01015003v1 C 0 C 0 s rheMac8.chr3 155471960 29 - 185818997 accacataaacaagtctgaataataaaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162296159 29 - 192294377 accacataaacaagtctgaataataaaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8776924 29 + 9440265 accacataaacaagtctgaataataaaca i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8506862 29 + 21915920 acgacataaacaagtctgaataataaaca i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15080465 29 - 90373283 accacataaacaagtctgaataataaaca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2265695 29 + 4234846 acgacataaacaagtctgaataataaaca i manLeu1.NW_012102865v1 C 0 C 0 e colAng1.NW_012120598v1 264585 2784 - 13750039 I e nomLeu3.chr25 4519005 30 + 32716333 I a score=12932344.000000 s hg38.chr21_KI270874v1_alt 149812 2816 + 166743 gct-aataacgtgatgacagg---atgaaatccatacatgtaagtactaaccttgaatgtaaacaagataaa---tgccctcaa----aagacagagtgacaagttggataaagaagcaaaactgtcttcaagggactcatgtgcaatgaaacccataggcccaaaacaaagggatggagaaaaatctaccaagcaaatggaaaccag--aaaaaaaaa--gg--gggttgctatttgaattttggacaaaacagattttaaactaaaaaagatcaataaagacaaggaagagcattacataatagtaaaggacttaattcaacaagaaaacttaactatcctaaatatatatgcacctaacacaggagcacctggatttataaagcaagttgttaaaaaccaatgaagacatttaaataaccacataataatagtgggaaacacttaagaccccagtgacagttttaaatcatcaaagcagaaaactaagaaaggtatttgggaccttaattcaacacttgaacaaagggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactttaaaatcaataacacaatcagccat-aaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccacagcacaataaaaatagaaataaatgagaagaaagtcactcaaaaccatagaagtgcatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagaaataaagaaattatttgaaactaatgaggaaaaagatacaacataccagaatctgtgggatacagccaatgcagtgttaagaggaaattttatagcactaaatgtccacatcaaaaagttggaaagatctcaaattaccaacctaatatcacaacacatcagaactagggaagcaagagcaaatccaccccgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaaacacacacacacaccacacacacacacacacaaacacaca------------cacacacacaa----------------aagacaaa-gaatccaggaactggttctttgaaaaaaaa---taagatagatag--------accactagctagtctaataaagaaaaaa-agagagaatatccaaataaacccatcagaaatgataaatggaatgttaccattaccccacataaatacaaatgccctcagagactattatggacacttctatacacagaagctagaaagcctaaaagaaatggatagattactgtaaacatacaacctcccaagattgaaccaggaagagattgaatccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccaccaatcaagaacagatgaatccatagacaaaatctaccaaatggataaggaagagctggtaccatttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaactcattctatgaggcgagcatcatcctgataacaaaacctggcagagacacaatgaaaaaagt-caacttcaggtcaatatacttaatgaacatcagtgtaaaaattctcaacaaattatttgcaaggtgaatctagcagcacatcaaaaatctaatccaccatgattaagtatgctttatccctgggatgcaagtttgattcaacatatgcaaatcaagaaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattaacacaacaaatgtagaaaaggctttcaataaaatttaacatctctttatgttgcaaaccctaaacaaactaggcattaaaggaacataattcaaaataaagaggcatctatgaaaaactcacatccaacatcatactgtatcaacaaaagctgtaagcattttccttgaaaactagaacaagacaaggatgccctctctcaccacttctattaaacatagtgttggaagtcctaaccagagcaatcaggtaagagaaagaaataaaaggcatccaaatgggaagagaggaagtcaaaatatctctgtttgcagatgacatgattctatacctagaaaacctaatagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcattcctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacagctaactaggaagctgaaaaacctatacaatgagaattacaaaacactgctcaaagaagtcagaatgccaaaaagaaatggaaaaacattccacgttcatgaataggacaaatcaatattgttgaaatggccatactgcccaaaccaatttacagattgaatgctattcatgttaaactacaaatgacattctttacagaactag----aaaaaactattttaaaatttatatgaaaTTGAGGGCCCAGGGCCCAG-------ATGGGCCAGAAGTGGCCAGATGCAGGCAGGGTGGGCACCTGGACACCTGCCTTGGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACATGCGGCCCAGCTTCTGTCCTCACGTTCCTCCAGCTCCCAGCCCCC-ACACCATGTCACCGCCTGTGCTGCCCACCGAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCATTCTTTGTGCTCAGCTCAGGCCTGCTGGTGG s panTro5.chr21 3774564 2834 + 33445071 gct-aacaacgtgatgacagg---atgaaatccatacatgtaagtactaaccttgaatgtaaacaagataaa---taccctcaattaaaagacagagtgacaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataggcccaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag--aaaaaaaaaaggg--gggttgctatttgaattttggacaaaacagattt-aaagtaaaaaagatcaataaagacaaggaagagcattacataatagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacctaacacaggagcacctggatttataaagtaagttgttaaaaaccaatgaagacattcaagtaaccacataataatagtgggaaacacttaagaccccagtgacagttttaaatcatcaaagcagaaaactaagaaaggtatttgggaccttaattcaacacttgaacaaagggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcacctgcacatggcacatactttaaaatcaataacacgatcggccat-aaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccatagcacaataaaaatagaaataaatgagaagaaagtcactcaaaaccatagaagtgcatggaaattaaatgacttcatcccacatgacttctgggtaagtaataaaattaaagcagaaataaagaaattatttgaaactaatgaggaaaaagatacaacataccagaatctgtgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacatcaaaaagttagaaagatctcaaattaccaacctaatatcacaacacatcagaactagggaagcaagagcaaatccaccccaaagctagcagaagaaaagaaattagaaaattagagctgagctaaagcaaattgatgtaaaacacacacacacaccacaaacacacacacacaaacacaca--------tacacacacacacaa----------------aagataaa-gaatccaggaactggttctttgaaaaaaaa--ataagatagatag--------accactagctagtctaataaagaaataa-agagagaatatccaaataaacccatcagaaatgacaaatggaatattaccataacaccacataaatacaaatgccctcagagactattatggacacctctatacacacaagctagaaagcctaaaagaaatggatagattactgtaaacatacaacctcccaagattgaaccaggaagagattgaatccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccaccaatcaagaacagatgaatccatagccaaaatctaccaaatgtataaggaagagctggtaccatttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaactcattctatgaggccagcatcatcctgaaaacaaaacctggcagagacacaatgaaaaaagt-caacttcaggtcaatatacttaatgaacatcagtgtaaaaattctcaacaaattatttgcaagctgaatctagcagcacatcaaaaatctaatccaccatgattaagtatgctttatccctgggatgcaagtttgattcaacatatgcaaatcaagaaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattaacacaataaatgtagaaaaggctttcaataaaatttaacatctctttatgttgcaaaccctaaacaaactaggcattaaaggaacataattcaaaataatgaggcatctaggaaaaactcacatccaacatcatactgtatcaacaaaagctgtaagcattttccttgaaaactagaacaagacaaggatgccctctctcaccacttctattaaacatagtattggaagtcctaaccagagcaatcaggtaagagaaagaaataaaaggcatccaaatgggaagagaggaagtcaaaatatctctgtttgcagatgacatgattctatacctagaaaacctaatagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcattcctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacagctaactaggaagctgaaaaacctctacaatgagaattacaaaacactgctcaaagaaatcagaatgccaaaaagaaatggaaaaacattccacattcatgaataggacaaatcaatattgttgaaatggccatactgcccaaaccaatttacagattgaatgctattcatgttaaactacaaatgacattctttacagaactag----aaaaaactattttaaaacttatatgaaaTTGAGGGCCCAGGGCCCAGGGCCCAGATGGGCCAGAAGTGGCCAGATGCAGGCAGGGTGGGCACCTGGACACCAGCCTTGGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACATGCGGCCCAGCTTCTGTCCTCACGTTGCTCCAGCTCCCAGCCCCCCACACCATGTCACCACCTGTGCTGCCCACCGAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTTTGTGCTCGGCTCAGGCCTGCTGGTGG i panTro5.chr21 C 0 C 0 s panPan2.chr21 17399948 2829 + 46275980 gct-aacaacgtgatgacagg---atgaaatccatacatgtaagtactaaccttgaatgtaaacaagataaa---taccctcaattaaaagacagagtgacaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataggcccaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag--aaaaaaaaagggg--gggttgctatttgaattttggacaaaacagattt-aaactaaaaaagatcaataaagacaaggaagagcgttacataatagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacctaacacaggagcacctggatttataaagtaagttgttaaaaaccaatgaagacattcaagtaaccacataataatagtgggaaacacttaagaccccagtgacagttttaaatcatcaaagcagaaaactaagaaaggtatttgggaccttaattcaacacttgaacaaagggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcacctgcacatggcacatgctttaaaatcaataacacgatcggccat-aaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccatagcgcaataaaaatagaaataaatgagaagaaagtcactcaaaaccatagaagtgcatggaaattaaatgacttcatcccacatgacttctgggtaagtaataaaattaaagcagaaataaagaaattatttgaaactaatgaggaaaaagatacaacataccagaatctgtgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacatcaaaaagttagaaagatctcaaattaccaacctaatatcacaacacatcagaactagggaagcaagagcaaatccaccccgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaaacacacacacacaccacacacacacacacacacaaacaca------------cacacacacaa----------------aagataaa-gaatccaggaactggttctttgaaaaaaaa---taagatagatag--------accactagctagtctaataaagaaaaaa-agagagaatatccaaataaacccatcagaaatgataaatggaatgttaccataaccccacataaatacaaatgccctcagagactattatggacacctctatacacacaagctagaaagcctaaaagaaatggatagattattgtaaacatacaacctcccaagattgaaccaggaagagattgaatctttaaacagacaaataatgaattgtgaaattgaatcagtaataaaaagcccaccaatcaagaacagatgaatccatagccaaaatctaccaaatgtataaggaagagctggtaccatttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaactcattctatgaggccagcatcatcctgaaaacaaaacctggcagagacacaatgaaaaaagt-caacttcaggtcaatatacttaatgaacatcagtgtaaaaattctcaacaaattatttgcaagctgaatctagcagcacatcaaaaatctaatccaccatgattaagatccctttatccctgggatgcaagtttgattcaacatatgcaaatcaagaaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattaacacaataaatgtagaaaaggctttcaataaaatttaacatctctttatgttgcaaaccctaaacaaactaggcattaaaggaacataattcaaaataatgaggcatctaggaaaaactcacatccaacatcatactgtatcaacaaaagctgtaagcattttccttgaaaactagaacaagacaaggatgccctctctcaccacttctattaaacatagtattggaagtcctaaccagagcaatcaggtaagagaaagaaataaaaggcatccaaatgggaagagaggaagtcaaaatatctctgtttgcagatgacatgattctatacctagaaaacctaatagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcattcctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacagctaactaggaagctgaaaaacctctacaatgagaattacaaaacactgctcaaagaaatcagaatgccaaaaagaaatggaaaaacattccacattcatgaataggacaaatcaatattgttgaaatggccatactgcccaaaccaatttacagattgaatgctattcatgttaaactacaaatgacattctttacagaactag----aaaaaactattttaaaatttatatgaaaTTGAGGGCCCAGGGCCCAGGGCCCAGATGGGCCAGAAGTGGCCAGATGCAGGCAGGGTGGGCACCTGGACACCAGCCTTGGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACATGCGGCCCAGCTTCTGTCCTCACGTTGCTCCAGCTCCCAGCCCCCCACACCATGTCACCGCCTGTGCTGCCCACCGAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTTTGTGCTCGGCTCAGGCCTGCTGGTGG i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3338835 2823 - 13858734 gct-aacaatatgatgacagg---attaaatccatacatgtaagtactaaccttgaatgtaaacaagataaa----gccctcaattaaaagacagagtgacaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacacataggcccaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag--aaaaaaaa---gg--gggttgctatttgaattttgcacaaaacagattttaaacttaaaaagatcaataaagacaaggaagagcattacataatagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacctaacacaggagcacctggatttataaagcaagttgttaaaaaccaatgaagacatttaaataaccacataataatagtgggaaacacttaagacctcagtgacagttttaaatcatcaaagcagaaaactaagaaaggtatttgggaccttaattcaacacttgaacaaagggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcatctgcacatggcatatactttaaaatcaataacacgattggccat-aaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactgagaccacagcacaat-aaaatagaaataaatgagaagaaagtcactcaaaaccatagaagtgcatggaaattaaatgactgcatcccaaatgacttctgggtaagtaataaaattaagccagaaataaagaaattatttgaaactaatgaggaaaaagatacaacataccagaatctgtgggatacagccaatgcag---taagaggaaagtttatagcactaaatgcccacatcaaaaagttagaaagatctcaaattaccaacctaatatcacaacacatcagaactagggaagcaagagcaaatccaccccgaaggtagcagaagaaaagaaattagaaaattagagctgagctaa---aaattgatgt-aaacacacacacacaccacacacacacacacacacacacacaaacacacatacacacacacacaa----------------aagataaa-gaatccaggaactggttctttggaaaaaaaaaataagatagatag--------accactagctagtctaataaagaaaaag-agagagaatatccaaataaacccatcagaaatgataaatggaatgttaccataaccccacataaatacaaatgccctcagagactattatggacacctctatacacacaagctagaaagcctaaaagaaatggatagattactgtaaacatacaacctcccaagattgaaccaggaagagattgaatccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccaccaatcaagaacagatgactccatagccaaaatctaccaaatgtataaggaagagctggtaccacttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaactcattctatgaggccagcatcatcctgataacaaaatctggcagagacacagtgaaaaaagt-caacttcaggtcaatatacttaatgaacatcagtgtaaaaattctcaacaaattatttgcaagctgaatctagcagcacatcaaaaatctaatccaccatgattaagtatgctttatccctgggatgcaagtttgattcaacgtatgcaaatcaagaaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattaacacaataaatgtagaaaaggctttcaataaaatttaacatctctttatgttgcaaaccctaaacaaactaggcattaaaggaacataattcaaaataatgaggcatctatgaaaaactcacatccaacatcatactgtatcaacaaaagctgtaagcattttccttgaaaactagaacaagacaaggatgccctctctcaccacttctattaaacatagtagtggaagtcctaaccagagcaatcaggtaagagaaagaaataaaaggcatccaaatgggaagggaggaagtcaaaatatccctgtttgcagatgacatgattctatacctagaaaacctaatagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcattcctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccatt-acaatagccacaaaaggaatgaaatacctaagaatacagctaactaggaagctgaaaaacctctacaatgagaattacaaaacacttctcaaagaagtcagaatgccaaaaagaaatggaaaaacattccacattcatgaataggacaaatcaatattgttgaaatggccgta-tgcccaaaccaatttacagattcaatgctattcatgttaaactacaaatgacattctttacagaactgg---aaaaaaactattttaaaatttatatgaaaTTGAGGGCCCAGGGCCCAG-------ATGGGCCAGAAGT-GCCAGATGCAGGCAGGGTGGGCACCTGGACACCAGCCTTGGGTGCCTTGCTGAACAGATGGTGGCAGTGGTGGCCACACATGCGGCCCAGCTTCTGTCCTCACGTTGCTCCAGCTCCCAGCCCCCCACA-CATGTCACCGCCTGTGCTGCCCACCGAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTGTTTGTGCTCGGCTCAGGCCTGCTGGTGG i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4519035 2811 + 32716333 gctaaatgacgagttaatgggtgcaggaaatccatacatgtaactactaacct---atgtaacaaacctgcacattgtcctcaattaaaagacagagtgataagatataaaaaaaaaaaaaaaaa----caagagactcatgtgcaatgaaacccataagcccaaaataaagggatggagaaaaatctaccaagcaaatgaaaaccag--aaaaaaaa---gg--gggttgctatttgaattttggacaaaacagattttaaactaaaaaagatcagcaaagacaaggaagagcattacataatagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacctaacacaggagcacctggatttataaagcaagttgttaaagaccgattaagacatttaaataacaacataataatagtgggagactcttaagaccccagtgacagttttaaatcatcaaagcagaaaactaacaaaggtatttgggacattaattcaacacttgaacaaatggacctatagacatctacagaactttccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactttaaaatcaataacgcaatcggccataaaaaa--atcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccacagcacaataaaaatagaaataaataataaaaaactcactcaaaaccatagaagtgcatggaaattaaatgacttcatcccaaatgacttctggataagtaataaaattaaggcagaaataaagaaattatttgaaactaatgaggaaaaagatacaacataccagaacctctgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacatcaaaaagttagaaagatctcaaattaccaacctaatatcacaacacatccgaactaggggagcaagagcaaatccaccctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaaacacgcacacacg------acacacacacacaaacacaca------------cacacacacaa----------------aagatcaatgaatccaggaactggttctttgaaaaaaaa--ataagatagatag--------accactagctagtctaataaagaa--aa-agagagaatatccaaataaacccatcagaaatgataaatggaatcttaccataaccccacagaaatacaaataccctcagagactattatggacacctcgatacacacaagctagaaagcctaaaagaaatggatagattactataaacatacaacctcccaagattgaaccaggaagagattgaatccttaaacagac----aatgaattctgaaattgagtcagtaataaaaagcccaccaatcaagaacagatgaattcatagccaaaatctatcagatgtagaaggaagagctggtaccatttctaccaaaatgattccaaaagattgaggaggagaacctcctccttaacaaattctatgaggccaccatcatcctgataacaaaacctggcagagacacaatgaaaaaaataccacttcaggtcaatatatttaatgaacatt-gtgtaaaaattctcaacaaattatttgcaagctgaatctagcagcacatcaaaaatctaatccaccatgattaagtatgctttatccctgggatgcaagtttgattcaacatatgcaaattaataaatgtgattcaccatataaactgaactaaaaacaaaaaccacataattaacacaataaatgtagaaaaggctttcaataaaatttaacatctctttatgttgtaaaccctaaacaaactaggcattaaaggaacataattcaaaataatgaggcatctataaaaaactcacatacgacatcatactgaatcaacaaaagctataagcattttccttgaaaactagaataagacaagaatgccctccctcaccacttctactaaacatagtactggaagtcctagccagagcaatcaggtaagagaaagaaataaaaggcatccaaatgggaagagaggaagtcaaaatatccctgtttgcagatgacatgattctatacctagaaaacctaatagtctctgcccaaaatctccttgatttgatacacaacttcagtatagtttcagaatacaaaatcaatgtacaagaattactagcattcctatacaccaacagcatccaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacagctaactaggaagctg-aagacctctacaatgagaattacaaaacactgctcaaagaagtcagaatgccaaaaagaaatgggaaaacattccatgttcatgaataggacaaatcaatattgttgaaatggtcatactgcccaaggcaatttacagattgaatgctattcatgttaaactacaaatgacgttctttacagaactag--aaaaaaaactattttaaaatttatatgaaaTTGAGGGCCCAGGACCCAG-------ATGGACCAGAAGTGGCCAGACGCAGGCAGGGTGGGCATCTGGATGCCAGCCTTGGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCTGCATGTGCAGCCCAGCTTCTATCCTCATGTTGCTCCAGCTCCCAGCCCCC-ACGCCATGTCACTGCCTGTGCTGCCCACCGAGTTGGTGCCTTCAGAGTACATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTCAGCTCAGGCCTGCTAGTGT i nomLeu3.chr25 I 30 C 0 s rheMac8.chr3 155471989 2805 - 185818997 gct-aacaacgtgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaagatcaa---tgcccccaattaaaagacagagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaagcaaatggaaaccagaaaaaaaaaaa--aa--gggttgctatttgaatttcagac-aaacagattttaaacttaaaaagatcaataaagacaaggaagagcattacatagtagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacccaacacaggagcacctggatttacaaagcaagttgttagagaccaatgaagacatttaaatagccacataataataatgggagactcttaacacca-agtgacagttttaaatcatcaaagcagaaaactaacaaaggtatttgagaccttaactcaacacttaaacaaatggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactttaaaatcaataacacaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattatatcaaccacatactcagaccacagcacaataaaaatagaaataaataataagaaagtcacttaagaccatagaagtgaatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagagataaagaaattatttgaaagtaatgaggaaaaagatagaacataccagaatctctgggatacggccaatgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaagctctcaaattactaacctaacatcacaacacctcagaactagggaaacaagagaaaatccaccctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaa-------------------acacacacacacacacacaca------------cacacacacac----------------gagatcaatgaatccaggaactggttctttgaaaaaaag---taagatagatag--------accactagttagactaataaagaaaaaaaagagagaatatccaaataagcccatcagaaatgataaacggaatgttaccacaacctcacagaaatacaaataccctcagagactattatggatacctctatacacacaagctagaaagcctaaaagaaatggatagattactataaacacacaacctcccaagattgaaccaggaagagattgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaggcccgtgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgaggaggagaatctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaatatacttgatgaatatcgg-gtaaaaattcttgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaccatgattaagtatgctttatccctgggatgcaagtttggttcaacatatgcaaatcaataaatgtgatccaccacataaactgtactaaaaacaaaaaccacataattatcacaataaatgtagaaaaggttttcaataatatttaacatctcttcatctggcaaaccctaaacaaactaggcattaaaggaacatacttcaaaataatgaggcatctatgaaaaa--cacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaactgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaagccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcagatgacttgattctacatatggaaaacctaacagttcctgcccaaaagttccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgcacaaaaattactagcact-ctatacaccaacagcatgcaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacatctaactaggaagctgaaagacctctacaatgagtattacaaaacactactcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacaaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccattcatgttacactataaatgatgttctttacagaactagaaaaaaaaaactattttaaaatttatatgaaatcaagggcccAGGGCCTAG-------ATGGGCCAGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACATGCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGCGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGGCCTGCTGGTGC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162296188 2795 - 192294377 gct-aacaacgtgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaagatcaa---tgcccccaattaaaag--agagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag----aaaaaaa--aa--gggttgctatttgaatttcagac-aaacagattttaaactaaaaaagatcaataaagacaaggaagagcattacatagtagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacccaacacaggagcacctggatttacaaagcaagttgttagataccaatgaagacatttaaatagccacataataataatgggagactcttaacacca-agtgacagttttaaatcatcaaagcagaaaactaacaaaggtatttgagaccttaactcaacacttaaacaaatggacctatagacatctacagaactctccatccaaaaacaacagaatacacattcttctcatctgcacatggcacatactttaaaatcaataacacaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattatatcaaccacatactcagaccacagcacaataaaaatagaaataaataataagaaagtcacttaagaccatagaagtgaatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagagataaagaaattatttgaaagtaatgaggaaaaagatagaacataccagaatctctgggatacggccaatgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaagctctcaaattactaacctaacatcacaacacctcagaactagggaaacaagagaaaatccaccctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaa-----------------------acacacacacacacaca------------cacacacacac----------------gagatcaatgaatccaggaactggttctttgaaaaaaag---taagatagatag--------accactagttagactaataaagaaaaaaaagagagaatatccaaataagcccatcagaaatgataaacggaatgttaccacaacctcacagaaatacaaataccctcagagactattatggatacctctatacacacaagctagaaagcctaaaagaaatggatagattactataaacacacaacctcccaagattgaaccaggaagagattgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaggcccgtgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgaggaggagaatctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaatatacttgatgaatatcgg-gtaaaaattcttgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaccatgattaagtatgctttatccctgggatgcaattttggttcaacatatgcaaatcaataaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattatcacaataaatgtagaaaaggttttcaataatatttaacatctcttcatctggcaaaccctaaacaaactaggcattaaaggaacatacttcaaaataatgaggcatctatgaaaaa--cacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaactgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaagccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcaaatgacttgattctacatatggaaaacctaacagtctctgcccaaaagttccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcact-ctatacaccaacagcatgcaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacatctaactaggaagctgaaagacctctacaatgagtattacaaaacactactcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacaaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccattcatgttacactataaatgatgttctttacagaactagaaaaaaaaaactattttaaaatttatatgaaatcaaGGGCCCAGGGCCTAG-------ATGGGCCAGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACGTGCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGCGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGGCCTGCTGGTGC i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8776953 2810 + 9440265 gct-aacaacgtgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaagatcaa---tgcccccaattaaaagacagagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag---aaaaaaaa--aa--gggttgctattttaatttcagac-aaacagattttaaactaaaaaagatcaataaagacaaggaagagcattacatagtagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacccaacacaggagcacctggatttacaaagcaagttgttagagaccaatgaagacatttaaatagccacataataataatgggagactcttaacacca-agtgacagttttaaatcatcaaagcagaaaactaacaaaggtatttgagaccttaactcaacacttaaacaaatggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactttaaaatcaataacacaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattatatcaaccacatactcagaccacagcacaataaaaatagaaataaataataagaaagtcacttaagaccatagaagtgaatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagagataaagaaattatttgaaagtaatgaggaaaaagatagaacataccagaatctctgggatacggccaatgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaagctctcaaattactaacctaacatcacaacacctcagaactagggaaacaagagaaaatccaccctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaaacacacac-----------acacacacacacacacacaca------------cacacacacac----------------gagatcaatgaatccaggaactggttctttgaaaaaaag---taagatagatag--------accactagttagactaataaagaaaaaaaagagagaatatccaaataagcccatcagaaatgataaacggaatgttaccacaacctcacagaaatacaaataccctcagagactattatggatacctctatacacacaagctagaaagcctaaaagaaatggatagattactataaacacacaacctcccaagattgaaccaggaagagactgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaggcccgtgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgaggaggagaatctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaatatacttgacgaatatcgg-gtaaaaaatcttgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaccatgattaagtatgctttatccctgggatgcaagtttggttcaacatatgcaaatcaataaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattatcacaataaatgtagaaaaggttttcaataatatttaacatctcttcatctggcaaaccctaaacaaactaggcattaaaggaacatacttcaaaataatgaggcatctatgaaaaa--cacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaactgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaagccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcagatgacttgattctacatatggaaaacctaacagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgcacaaaaattactagcact-ctatacaccaacagcatgcaagccgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacatctaactaggaagctgaaagacctctacaatgagtattacaaaacactactcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacaaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccattcatgttacactataaatgatgttctttacagaactagaaaaaaaaaactattttaaaatttatatgaaatcaaGGGCCCAGGGCCTAG-------ATGGGCCAGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACGTGCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGGCCTGCTGGTGC i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8506891 2809 + 21915920 gct-aacaacgtgatgacagg---atcaaatccatacatataaacactaactttgaatgtaaacaagatcaa---tgccctcaattaaaagacagagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag----caaaaaa--aa--gggttgctatttgaatttcagac-aaacagattttaaactaaaaaagatcaataaagacaaggaagagcattacatagtagtaaaggacttaattcaacaagaagacttaactatcctaaatatatatgcacccaacacaggagcacctggatttacaaagcaagttgttagagaccaatgaagacttttaaataaccacataataataatgggagactcttaacaccacagtgacagttttaaatcatcaaagcagaaaactaacaaaggtattcgggaccttaactcaacacttgaacaaatggacctatagacatctacagaactctccatccaaaagaaacagaatatacattcttctcatctgcacgtggcacatactttaaaatcaataacaaaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattatatcaaccacatactcagaccacagcacaataaaaatagaaataaataataagaaagtcacttaagaccatagaagtgaatggaaattaaatgactttatcccaaatgacttctgggtaggtaataaaattaaggcagaaataaagaaattatttgaaactgatgaggaaaaagatagaacatatcagaatctctgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaaactctcaaattactaacctaacatcacaatacctcagaactggggaaacaagagcaaatccaccccgaagctagtagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaa--acacac-----------acacacacacacacacacaca------------cacacacacac----------------gagatcaatgaatccaggaactggttctttgaaaaaaag---taagatagatag--------accactagttagactaataaagaaaaaaaagagggaatatccaaataagcccatcagaaatgataaacggaatgttaccacaacttcacagaaatacaaataccctcagagactattatggatacctctatacacacaagttagaaagcctaaaagaaatggatagattactataaacacacaacctcccaagattgaaccaggaagagattgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaggcccgtgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgaggaggagaatctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaatatacttgatgaatatcag-gtaaaaattcttgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaccatgattaagtatgctttatccctgggatgcaagtttggttcaacatatgcaaatcaataaatgtgattcaccacataaactgtactaaacacaaaaaccacataattatcacaataaatgcagaaaaagttttcaataatatttaacatctcttcatgtggcaaaccctcaacaaactaggcattaaaggaacatacttcaaaataatgaggcatctatgaaaaactcacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaactgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaagccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcagatgacttgattctacatatggaaaacctaacagtctctgctcaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcatt-ctatacaccaacagcatgcaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacatctaactaggaagctgaaagacttctacaatgagtattacaaaacactactcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacaaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccactcatgttacactataaatgatgttctttacagaactag-aaaaaaaaactattttaaaatttatatgaaatcaaGGGCCCAGGGCCTAG-------ATGGGCCAGAATCAGCCAGACGCTGACAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACATGTGCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGCCCTGCTGGTGC i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15080494 2799 - 90373283 gct-aacaacgtgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaagatcaa---tgcccccaattaaaagacagagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaagcaaatggaaaccag--aaaaaaaaa--aaaggggttgctatttgaatttcagac-aaacagattttaaactaaaaaagatcaataaagacaaggaggagcattacatagtagtaaaggacttaattcaacaagaagacttaactatcctaaatatatattcacccaacacaggagcacctggatttacaaagcaagttgttagagaccaatgaagacatttaaatagccgcataataataatgggagactcttaacacca-agtgacagttttaaatcatcaaagcagaaaactaacaaaggtatttgagaccttaaatcaacacttaaacaaatggacctatagacatctacagaactctccatccaaaaacaacagaatatacattcttctcatctgcacatggcacatactataaaatcaataacacaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattataccaaccacatactcagaccacagcacaataaaaataaaaataaataataagaaagtcactcaagaccatagaagtgaatggaaattaaatgacttcatcccaaatgacttctgggtaagtaataaaattaaggcagagataaagaaattatttgaaagtcatgaggaaaaagatagaacataccagaatctctgggatacagccaacgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaagctctcaaattactaacctaacatcacaacacctcagaactagggaaacaagagcaaatccactctgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaa---------------------acacacacacacacacaca------------cacacacacac----------------gagatcaatgaatccaggaactggttctttgaaaaaaag---taagatacatag--------accactagttagactaataaagaaaaaa-----agaatatccaaataagcccatcagaaatgataaacggaatgttatcacaacctcacagaaatacaaataccctcagagactattatggatacctctatacacacaagctagaaagcctaaaagaaatggatagattactataaacatacaacctcccaagattgaaccaggaagagattgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccgtgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgagaaggagaatatcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaatatacttgatgaacatcag-gtaaaaattctcgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaacatgattaagtatgctttatccctgggatgcaagtttggttcaacatatgcaaatcaataaatgtgattcaccacataaactgtactaaaaacaaaaaccacataattatcacaataaatgtagaaaaggttttcaataatatttaacatctcttcatgtggcaaaccctaaacaaactaggcattaaaggaacatgcttcaaaataatgagacatctatgaaaaactcacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaagtgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaaaccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcagatgacttgattctacatatggaaaacctaacagtctcttcccaaaagttccttgatttgatacacaacttcagtatagtttcaggatacgaaatcaatgtacaaaaattactagcatt-ctatacaccaacagcatgcaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatatctctaactaggaagctgaaagacctctacaatgagtatcacaaaacactactcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacgaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccattcatgttaaactataaatgacgttctttacagaactag-gaaaaaaaactattttaaaatttatatgaaatcGAGGGCCCAGGGCCTAG-------ATGGGCCGGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACGTGCAGCCCAGCTTCTGTCCTCATGGTGCTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGGCCTGCTGGTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2265724 2823 + 4234846 gct-aacaacatgatgacagg---atcaaatccatacatataaatactaactttgaatgtaaacaagatcaa---tgccctcaattaaaagacagagtgtcaagttggataaagaagcaaaactgtcttcaagagactcatgtgcaatgaaacccataagctcaaaataaagggatggagaaaaatctaccaaccaaatggaaaccag--aaaaaaaaa--aa--gggttgctatttgaattgcagac-aaacagattttaaactaaaaaagatcaataaagacaaggaagagcattacatagtagtaaaggacttaattcaataagaagacttaactatcctaaatatatatgcacccaacacaggagcacctggatttataaagcaagttgttagagactaatgaagacttttaaataaccacataataataatgggagactcttaacaccacagtgacagttttaaatcatcaaagcagaaaactaacaaaggtattcgggaccttaactcaacacttgaacaaatggacctatagacatctacagaactctccatccaaaagcaacagaatatacattcttctcatctgcacgtggcacatactttaaaatcaataacaaaatcggccac-aaaaaacatcttcaccaaattttaaaaaacagaaattatatcaaccacatactcagaccacagcacaataaaaatagaaataaataataagaaagtcacttaagaccatagaagtgaatggaaattaaatgactttatcccaaatgacttctgggtaagtaataaaattaaggcagaaataaagaaattatttgaaactgatgaggaaaaagatagaacatatcagaatctctgggatacagccaatgcagtgttaagaggaaagtttatagcactaaatgcccacaacaaaaagttagaaaactctcaaattactaacctaacatcacaatacctcagaactggggaaacaagagtaaatccaccccgaagctagcagaagaaaagaaattagaaaattagagctgagctaaaggaaattgatgtaaa---------------------acacacacacacacacaca------------cacacacacacacacacacacacacaaaagatcaatgaatccaggaactggttctttgaaaaaa------aagatactttattagtcttacttttagctagactaataaagaaaaaa-agagagaatatccaaataaacccatcagaaatgataaacggaatgttaccacaaccccacagaagtacaaataccctcagagactattatggacacctgtatacacacaagctagaaagcctaaaacaaatggatagattactgtaaacatacaacctcccaagattgaaccaggaagagattgaacccttaaacagacaaacaatgaattgtgaaattgaatcagtaataaaaagcccatgaaccaagaacagatgaattcatagccaaaatctaccagatgtataaggaagagctggtaccatttctactgaaatgattccaaaagattgaggaggagaatctcctccttaactcattctatgaggccagcatcatcctgataacaaaacctggtggagacacaatgaaaaaaga-caacttcaggtcaacatgcttgatgaacatcag-gtaaaaattatcgataaaatatatgcaagtggaatctagcagcacatcaaaaatcgaaaccaccatgattaagtattctttatccctgggatgcaagtttggttcaacatatgcaaatcaataaatgtgattcaccacatgaactgtactaaacacaaaaaccacataattatcacaataaatgcagaaaaggttttcaataatatttaacatctcttcatgtggcaaaccctaaacaaactaggcattaaaggaacatagttcaaaataatgaggcatctatgaaaaactcacatccaacatcatacttaatcaacaaaagctataagcattttccttgaaaactgtaacaagacaaggataccctctctcaccactgctattaaacatagtactggaagccttagccagagcaatcagataagagaaagaaataaaaggcatccaaataggaagagaggaagtcaaaatatccctgtttgcagatgacttgattctacatatggaaaacctaacagtctctgcccaaaagctccttgatttgatacacaacttcagtatagtttcaggatacaaaatcaatgtacaaaaattactagcatt-ctatacaccaacagcatgcaagctgagagacaaatcaagaacacaatcccattcacaatagccacaaaaagaatgaaatacctaagaatacacctaactaggaagctgaaagacctctacaatgagtattacaaaacactgctcaaagaagtcagaatgccaaaaagaaatggagaaatattccatgttcatgaataggacaaatcaatattgttgaaatggccatactg-ccaaagcaatttacagattgaatgccattcatgttacactataaatgatgttctttacagaactag-aaaaaaaaactattttaaaatttatatgaaatcaagggcccAGGGCCTAG-------ATGGGCCAGAATCAGCCAGACGCTGGCAGGGTGGGCACCTGGACGCCAGCCTCAGGTGCCTTGCTGCCCAGATGGTGGCAGTGGTGGCCACACGTGCAGCCCAGCTTCTGTCCTCATGGTGTTCCAGCTCCCAGTCCCCCACAGCATGTCACCACCTGCACTGCCCACCAAGTTGGTGCCTTCAGAGTGCATTGTGGTGCTGCTGTCCTGTGCACTCTCTGTGCTTGGCTCAGCCCTGCTGGTGC i manLeu1.NW_012102865v1 C 0 C 0 e colAng1.NW_012120598v1 264585 2784 - 13750039 I a score=8139359.000000 s hg38.chr21_KI270874v1_alt 152628 1454 + 166743 CCATGTGCACCCTGTGGCCCGACCTGTGAAGCCAGGCACAGTGCCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTCAGCTGCCTCCTACTTCTATGGGATGCTGCAGGACTTCGCAGGCTGTCATGGAACTGCATGCTGCAAGGTGTGCTGTCCACCCTCACCAACACCAGCTCATTCTTCTGGACTGTGGCCATCATACTATACCTGTACCTCAGGATCACTAGCACCGTGCAGGCCCTGCACCAACCATCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGGGTGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGAGGAAAAACCAAGACCTTACCCAGCAGTTCAAGCATCTTTCAAGTAAGCCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAGAATCTCATGGCATTATGTGCTGAACTGTGGGCAAGAATCCTAGGGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTGTTAAAAATGTAAGTGCTTTCCAAGtgagagatgaggccggctggacttcctgggtccagcggggactttggggaactttcctgtcttacaagaggatttgtaaactcaccaatcagtgctctgtaaaacataccaatcagcaggattctaaaagcagccagtcaaagggaggattgaaaaaagggcactctgacaggatagaaacagaacatggaaggggacaataagggaacaaaaactggccaccccagccagcagcagcaacccacttgtgtccccttccacactgtggaaaccgttcttttgctcttcacaataaatcttgctactgttcactctttgggtccttgccatctttaagagctgtaacactcaccatgaaggtctgcagcttcattcttgaaatcagcaagaccacaaacccacttgcaggaacgaaccccagacacaTCTTGGGGGCTCATCCAGGAtatcaccacgtggtgagtaccattggacccctttcacttgctattctgtcctatttttccttagaatttgggggctaaacaccaggcacctgtcagccagtcaaaagcaaatggcacagctgctggactacagacacaggtgtcagactttttgggaaagggctctctaacaacccccaactcttcggagtcaggagtgttcatttgcctggaaccagcttctgctttccctgcacttctgggctgagctgagggtcaacagaga-gg-aaaactaatcagctccagggtcccaacaaaaacttggttgaccctgcagctatgagcagagctctcaaacttatgttgcccaagcgagactcacccatctgtcctgtctatcctgacacttgtctcct s panTro5.chr21 3777398 1453 + 33445071 CCATGTGCACCCTGTGGCCCGACCTGTGAAGCCAGGCACAGTGCCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTCAGCTGCCTCCTACTTCTATGGGGTGCTGCAGGACTTTGCAGGCTGTCATGGAACTGCATGCTGCAAGGTGTGCTGTCCACCCTCACCAACACCAGCTCATTCTTCTGGACTGTGGCCATCATACTATACCTGTACCTCAGGATCACTAGCACCGTGCAGGCCCTGCACCAACCATCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGGATGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGAGGAAAAACCAAGACCTTACCCAGCAGTTCAAGCATCTTTCAAGTAAGCCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAGAATCTCGTGGCATTATGTGCTGAACTGTGGGCAGGAATCCTAGGGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGGGCATCAGATACTGCCCTAATTATAGGTCCTTTCTGTTAAAAATGTAAGTACTTTCCAAGtgagagatgaggccggctggacttcctgggtccagcggggac-ttggggaactttcctgtcttacaagaggattgtaaaactcaccaatcagtgctctgtaaaacataccaatcagcaggattctaaaagtagccagtcacagggaggattgaaaaaagggcactctgacaggatagaaacagaacatggaaggggacaataagggaacaaaaactggccaccccagccagcagcagcaacccacttgtgtccccttccacactgtggaaaccgttcttttgctcttcacaataaatcttgctactgttcactctttgggtccttgccatctttaagagctgtaacactcaccatgaaggtctgcagcttcattcttgaaatcagcaagaccacaaacccacttgcaggaatgaactccagacacaTCTTGGGGGCTCATCCAGGAtatcaccacgtggtgagtaccattggacccctttcacttgctattctgtcctatttttccttagaatttgggggctaaacaccaggcacctgtcagccagttaaaagcaaatggcacagctgctggactacagacacaggtgttagactttttgggaaagggctctctaacaacccccaactcttcggagtcaggagtgttcatttgcctggaaccagcttctgctttccctgcacttctgggctgagctgagggtcaacagaga-gg-aaaactaatcagctccagggtcccaacaaaaagttggttgaccctgcagctatgagcagagctctcaaacttatgttgcccaagcgagacacgcccatctgtcctgtctatcctgacacttgtctcct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17402777 1453 + 46275980 CCATGTGCACCCTGTGGCCCGACCTGTGAAGCCAGGCACAGTGCCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTCAGCTGCCTCCTACTTCTATGGGGTGCTGCAGGACTTTGCAGGCTGTCATGGAACTGCATGCTGCAAGGTGTGCTGTCCACCCTCACCAACACCAGCTCATTCTTCTGGACTGTGGCCATGATACTATACCTGTACCTCAGGATCACTAGCACCGTGCAGGCCCTGCACCAACCATCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGGCTGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGAGGAAAAACCAAGACCTTACCCAGCAGTTCAAGCATCTTTCAAGTAAGCCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAGAATCTCGTGGCATTATGTGCTGAACTGTGGGCAGGAATCCTAGGGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTGTTAAAAATGTAAGTGCTTTCCAAGtgagagatgaggccggctggacttcctgggtccagcggggac-ttggggaactttcctgtcttacaagaggattgtaaaactcaccaatcagtgctctgtaaaacataccaatcagcaggattctaaaagtagccagtcacagggaggattgaaaaaagggcactctgacaggatagaaacagaacatggaaggggacaataagggaacaaaaactggccaccccagccagcagcagcaacccacttgtgtccccttccacactgtggaaaccgttcttttgctcttcacaataaatcttgctactgttcactctttgggtccttgccatctttaagagctgtaacactcaccatgaaggtctgcagcttcattcttgaaatcagcaagaccacaaacccacttgcaggaacgaactccagacacaTCTTGGGGGCTCATCCAGGAtatcaccacgtggtgagtaccattggacccctttcacttgctattctgtcctatttttccttagaatttgggggctaaacaccaggcacctgtcagccagttaaaagcaaatggcacagctgctggactacagacacaggtgttagactttttgggaaagggctctctaacaacccccaactcttcggagtcaggagtgttcatttgcctggaaccagcttctgctttccctgcacttctgggctgagctgagggtcaacagaga-gg-aaaactaatcagctccagggtcccaacaaaaagttggttgaccctgcagctatgagcagagctctcaaacttatgttgcccaagcgagacacgcccatctgtcctgtctatcctgacacttgtctcct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3341658 1425 - 13858734 CCATGAGCACCCTGTGGCCCGACCTGTGAAGCCAGGCACAGTGCCTGCTGCTCTTCCTGTCACTGGTCAACCTGCTCTCAGCTGCCTCCTACTTCTATGGGGTGCTGCAGGACTTCGCAGGCTGTCATGGAACTGCGTGCTGCAAGGTGTGCTGTCCACCCTCACCAACACCAGCTCATTCTTCTGGACTGTGGCCATCATACTATACCTGTACCTCAGGATCACTAGCA-CGTGCAGGCCCTGCACCAACCATCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCACAGTTCAGCTGTTCTGAGATTGAAGTCAGGGTTGAAGGGCTGGTCTGGGGGGTCTGGAGTCCACCTGGAGTCTCTCTGAGAGTGAGGAAAAACCAAGACCTTACCCAGCAGTTCAAGCATCTTTCAAGTAAGCCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAGAATCTCATGGCATTATATGCTGAACTGTGGGCAGGAATCCTAGGGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTGTTAAAAATGTAAGTACTTTCCAAGtgagagatgaggccggctggacttcctgtgtccagtggggac-ttggggaactttcctatcttacaagaggattgtaaaactcaccaatcagtgctctgtaaaacataccaatcagcaggattctaaaagtagccagtcacagggaggattg-aaaaagggcaatctgacaggatagaaacagaacatggaaggggacaataagggaaaaaaaactggccaccccagccagcagcagcaacccacttgtgtccccttccacactgtggaaactgttcttttgcacctcacaataaatcttgctactgctcactcttttggtccttgccatctttaagagctgtaacactcaccatgaaggtctgcagcttcattcttgaaatcagcaagaccacaaacccactggcaggaaccaactccagacacaTCTTGGGGGCTCATCCAGGAtatcaccacgtggtgagtaccactggacccctttcacttgctattctgtccta-ttttccttagaatttgggggctaaacaccaggcacctgtcagccagttaaaagcaactggcacagctgctggactacagacacaggtgtcagactttttgggaaagggctctctaagaacccctgactcttcggagtcaggagtgttcatttg------------------------tgcacttctgggctgagctgagggtcaacagaga-gg-aaaactaatcagctccagggtcccaacaaaaagttggttgaccctgcagctataagcagagctctcaaacttatgttgcccaagcaagactc-cccatctgtcctgtctatactgacacttgtctcct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4521846 1453 + 32716333 CCATGCATACCCTGTGGCCCGACCTGCGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTTGGCTACCTCCTACTTCTATGGGGTACTGCAGGACTTCATGGGCTGTCATGGAACTGTGTGCTGCAGGGTGTGCTGTCCACCCTCACCAACACCAGCTCCTTCTTCTGGGCCGTGGCAATCATACTCTACCTTTACCTCAGGATCATTCGCACTGTGCGGGCCCTGCACCAACCATCTGCTCTGAGCCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGTTTGAACTCAGGGGTGGAGGGCTGGTTTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGAGGAAAAACCAAGACCTTAACCTGCAGTTCAAGCATCTTTCAAGTAAGCCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATGGCATTCTGTGCTGAACTGTGGGCAGGAATACTAGGGCTGTTTTCCTTTTCTCCTTCTGCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagagatgaggccagctggacttcctgggtacagtggggac-ttggggaactttcctgtcttacaagaggattgtaaaactcaccaatcagtgctctgtaaaacacaccaatcagcagtattctaaaagtagccaatcacagggaggattgaaaaaagggcactctgataggacagaaacagaacatggaaggggacaataagggaataaaaactggccatgccagccagcagcagcaacccacttgggtccccttccacactgtggaaactgttcttttgctcttcacaataaatcttgctactgctcactcttcgggtccttgccatctttaagagctgtaacactcacaatgaaggtctgcggcttcattcttgaagtcagcaagaccacaaaccctctggcaggaaccaactccagacacaTCTTAGGGGCTCATCCAGGAtatcaccatgtggtgagtaccatcagacccctttcacttgctattctgtcctatttttccttagaatttgagggctaaacactgggcacctgtcagccagttaaaagcaactggcgcagctgccggactaaagacacaggtgtcaggcttttagggaaagggctctctaacaaccctggactctttggagtcaggagtgttggtttgcctgaaaccagcttttgctttccctgcacttctgggctgagccaaggatcaacagaga-gg-aaaactaatcagctccagggtcccaacaaaaagttggttggccctgcacctatgagcagagctctcaagcttacgttgcccaagcgagactcacccatctgtcctatctctcctgacacttctctcct i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155474794 1448 - 185818997 CCACACACACCCTGTGGCCCGACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTTGGCCACCTCCTACTTCTATGGGGTGCTGCAGGACTTCATAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCTTTCTTCTGGACCGTGGCCATCGTACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCACGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGG-TGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTACGCTGCATTTCAAGCATCTTTCAAGTAAGTCTCACTGAAGAGGGTCATCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaactttcttgtcttacaaggggattgtaaaactcaccaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggatagaaacagaacatggaagaggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgtggaaactgttcttttactcttcacaataaatcttgctactgctcattctttggctccctgccatctttaagagctgtaacactcaccgtgaaggtctgcggcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacGTCTTAGGGGCTTATCTGGGAtatcaccacagggtgagtaccatcagacttctttcgcttgctattctgtcctattcttccttagaattcaggggctaaacaccgggcacctgtcagtcagttaaaagcaactagcacacctgccaga--aaagacatgggtgtcaggctttttgggaaagggctctctaacaacccccaactctttggagtcaggagtgttggtttgcctggaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaaga-ga-aaaactaatcagctctgaggtcccaacaaaaagttgattgaccctgcagctattagcagagctctcaaagttatgttgcccaagcgagactcgcccatctgtcctatctatcctgatccttgtctcct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162298983 1448 - 192294377 CCACACACACCCTGTGGCCCGACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTTGGCCACCTCCTACTTCTATGGGGTGCTGCAGGACTTCATAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCCTTCTTCTGGACCGTGGCCATCGTACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCACGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGG-TGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTACGCTGCATTTCAAGCATCTTTCAAGTAAGTCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaactttcttgtcttacaaggggattgtaaaactcaccaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggatagaaacagaacatggaagaggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgtggaaactgttcttttactcttcacaataaatcttgctactgctcattctttggctccctgccatctttaagagctgtaacactcaccgtgaaggtctgcggcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacgtcTTAGGGGCTTATCTGGGATatcaccacagggtgagtaccatcggacttctttcgcttgctattctgtcctattcttccttagaattcaggggctaaacaccgggcacctgtcagtcagttaaaagcaactagcacagctgccaga--aaagacatgggtgtcaggctttttgggaaagggctctctaacaacccccaactctttggagtcaggagtgttggtttgcctggaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaaga-ga-aaaactaatcagctctgaggtcccaacaaaaagttgattgaccctgcagctattagcagagctctcaaagttatgttgcccaagcgagactcgcccatctgtcctatctatcctgatccttgtctcct i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8779763 1443 + 9440265 CCACACACACCCTGTGGCCCAACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTTGGCCACCTCCTACTTCTATGGGGTGCCGCAGGACTTCATAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCCTTCTTCTGGACCGTGGCCATCGTACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATTTGCTCTGAACCTTCCAC-TCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGG-TGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTACGCTGCATTTCAAGCATCTTTC----AAGTCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaactttcttgtcttacaaggggattgtaaaactcaccaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggatagaaacagaacatggaagaggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgtggaaactgttcttttactcttcacaataaatcttgctactgctcattctttggctccctgccatctttaagagctgtaacactcaccgtgaaggtctgcggcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacGTCTTAGGGGCTTATCTGGGAtatcaccacagggtgagtaccatcggacttctttcgcttgctattctgtcctattcttccttagaattcaggggctaaacaccgggcacctgtcagtcagttaaaagcaactagcacagctgccaga--aaagacatgggtgtcaggctttttgggaaagggctctctaacaacccccaactctttggagtcaggagtgttggtttgcctggaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaaga-ga-aaaactaatcagctctgaggtcccaacaaaaagttgattgaccctgcagctattagcagagctctcaaagttatgttgcccaagcgagactcgcccatctgtcctatctatcctgatccttgtctcct i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8509700 1441 + 21915920 CCACACACACCCTGTGGCCTGACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTCTCGGCCACCTCCTACTTCTATGGGGTGCTGCAGGACTTCGTAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCCTTCTTCTGGACCATGGCCATCATACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGG-TGGAGGGCT--------GGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTACCCTGCATTTCAAGCATCTTTCAAGTAAGTCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCTCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaaatttcttgtcttacaaggggattgtaaaactcacaaatcagcactctgtaaaacacaccaatcagcaggactctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggatagaaacagaacatggaaggggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgcggaaactgttcttttactcttcacaataaatattgctactgctcattctttggctccttgccatctttaagagctgtaacactcaccgtgaaggtctgcggcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacaTCTTGGGGGCTCATCTGGGAtatcaccacatggtgagtaccattggacctctttcgcttgctattctgtcctatttttccttagaattcaggggctaaacaccaggcacctgtcagtcagttaaaagcaactagcacagctgccaga--aaagacatgggtgtcaggctttttgggaaagggctctctaacaacccccaactctttggagtcaggagtgttggtttgcctgtaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaagagga-aaaactaatcagctctggggtcccaacaaaaagttgattgaccctgcagctatgagcagagctctcaaagttatgttgcccaagtgagactcgcccatctgtcctatctatcctgacccttgtctcct i cerAty1.NW_012002954v1 C 0 C 0 s chlSab2.chr2 15083293 1441 - 90373283 CCACACACACCCTGTGGCCCGACCTGTGCAGCTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTTTTGGCCACCTCCTACTTCTATGGGGTGCCGCAGGACTTCGTAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCCTTCTTCTGGACCGTGGCCATCATACCCTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGG-AGGAGGGCTGGTCTGGGGGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTGCTCTGCATTTCAAGCATCTTTCAAGTAAGTCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTATTTTCCTTTTCTCCTTCTTCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTCTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaactttcttgtcttacaaggggattgtaaaactcaccaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggacagaaacagaacatggaaggggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgtggaaactgttcttttactcttcacaataaatcttgctactgctcattctttggctccttgccatctttaagagctgtaacactcacggtgaaggtctgcagcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacatcttaggggctTATCTGGGATATCAccacagggtgagtaccatcagacttctttcgcttgctattctgtcctatttttccttagaattcaggggctaaacaccgggcacctgtcagtcagttaaaagcaactagcacagctgccaga--aaa-------gtgtcaggatttttgggaaggggctctctaacaacccccaactctttggagtcaggagtgttggtttgcctggaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaaga-gg-aaaactaatcagctctgaggtcccaacaaaaagttgattgaccctgcagctattagcagagctctcaaagttatgttgcccaagcgagactcacccatctgtcctatctatcctgacccttgtctcct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2268547 1441 + 4234846 CCACACACACCCTGTGGCCCGACCTGTGCGGTTGGGCACAGCACCTGCTGCTCTTCCTGTCACTGGCCAACCTGCTTTCGGCCACCTCCTACTTCTATGGGGTGCTGCAGGACTTCATAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCTACCCTCGCCAACACCAGCTCCTTCTTCTGGACCATGGCCATCATACCCTACCTGTACTTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGG-TGGAGGGCT--------GGTCTGGGAGTCCACCTGGAGTCTCTCTGAGAGTGGGGAAAAACGAAGACCTTACCCTGCATTTCAAGCGTCTTTCAAGTAAGTCTCACTGAAGAGGGTCAGCCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCACAGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGAGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCCAAGtgagaggtgaggccagctggacttcctgggtcgagtggggac-ttggggaaatttcttgtcttacaaggggattgtaaaactcacaaatcagcgctctgtaaaacacaccaatcagcaggattctaaaagtagccaatcacaggaaggattgaaaaaagggcactctgataggatagaaacagaacatggaaggggacaataagggaataaaaactggccaccccagccagcagcagcaacccacttgggtcccctaccaccctgcggaaactgttcttttactcttcacaataaatattgctactgctcattctttggctccctgccatctttaagagctgtaacactcaccgtgaaggtctgcggcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacaTCTTGGGGGCTCATCTGGGAtatcaccacatggtgagtaccattggacctctttcgcttgctattctgtcctatttttccttagaattcaggggctaaacaccaggcacctgtcagtcagttaaaagcaactagcacagctgccaga--aaagacatgggtgtcaggctttttgggaaagggctctctaacaacccccaactctttggagtcaggagtgttggtttgcctgtaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacaaaga-ggaaaaactaatcagctctggggtcccaacaaaaagttgattgaccctgcagctattagcagagctctcaaagttatgtggcccaagtgagactcgcccatctgtcctatctatcctgacccttgtctcct i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 267369 1447 - 13750039 CCATGCACACCCTGTGGCCTGACCTGTGCAGCTGGGCACAGCACCTGTTGCTCTTCCTGCCACTGGCCAACCTGCTCTCGGCCACCTCCTACTTCTATGGGGTGCTGCAGGACTTCGCAGGCTGTCATGGAACTGCATGCTGCAGGGTGTGCTGTCCACCCTCGCCAACACCAGCTCTTTCTTCCGGACTGTGGCCATCATACCTTACCTGTACCTCAGGATCATTCGCACCATGCAGGCCCTGCACCAACCATCTGCTCTGAACCTTCCATGTCATCAGGTGATCTTGACTTTCCAGAGTTCAGCTGTTCTGAGATTGAAGTCAGGG-TGGAGGGCTGATCTGGGGGTCTGGGAGTCTACCTGGAGTCTCTCTGAGAGTGGGGAAAAACCAAGACCTTACCCTGCATTTCAAGCGTCTTTCAAGTAAGTCTCACTGAAGAGGGTCAGTCCTTCCCTGGGGAATGTCAGGTTTTGAAAATCTCATGGCATCCTGTGCTGAACTGTGGGCAGGAATCCTAGGGCTGTTTTCCTTTTCTCCTTCTCCCAGATCAGAGCATCAGATACTGCCCTAATTATAGGTCCTTTCTATTAAAAATGTAAGTGCTTTCTAAGtgacagatgaggccagctggacttcctgggttgagtggggac-ttggggaactttcttgtcttacaagaggattgtaaaactcatcaatcagcactctgtaaaacacaccaatcagcaggattctaaaagtagccagtcataggaaggattgaaaaaagggcaccctgataggatagaaacagaacatggaaggggacaataagggaataaaaacttgccaccccagccagcagcagcaacccacttgggtcccctaccacactgtggaaactgttcttttgctcttcacaataaatcttgctactgctcattctttgggtccttgccatctttaagagctgtaacactcaccgcgaaggtccacggcttcattcttgaagtcagcaagaccatgaacccactggcaagaaccaa--ccagacacaTCTTGGGGGCTCATCCAGGAt---accacatggtgagtaccatcagacccctttcacttgctagtctgtcctatttttccttagaattcaggggctacacaccgggcacctgtcagccagttaaaagcaactagcacagctgccagactaaagacatgggtgtcaggctttttgggaaagggctctctaacaacccccaactctccggattcaggagtgttggtttgcctggaaccagcttctgctttccctgcatttctgggctaagccaagggtcaacagaga-gg-aaaactaatcagctctggggtcccaacaaaaacttgattgaccctgcagctattagcagagctctcaaagttatgctgcccaagcgagacttgcccatctgtcctatctatcctgacccttgtctcct i colAng1.NW_012120598v1 I 2784 I 10 a score=5500.000000 s hg38.chr21_KI270874v1_alt 154082 1 + 166743 g s panTro5.chr21 3778851 1 + 33445071 g i panTro5.chr21 C 0 C 0 s panPan2.chr21 17404230 1 + 46275980 g i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3343083 1 - 13858734 g i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4523299 1 + 32716333 g i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155476242 1 - 185818997 g i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162300431 1 - 192294377 g i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8781206 1 + 9440265 g i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8511141 1 + 21915920 g i cerAty1.NW_012002954v1 C 0 I 9 s chlSab2.chr2 15084734 1 - 90373283 g i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2269988 1 + 4234846 g i manLeu1.NW_012102865v1 C 0 I 9 e colAng1.NW_012120598v1 268816 10 - 13750039 I a score=34380.000000 s hg38.chr21_KI270874v1_alt 154083 10 + 166743 ggtcctaatg s panTro5.chr21 3778852 10 + 33445071 ggtcctaatg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17404231 10 + 46275980 ggtcctaatg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3343084 10 - 13858734 ggtcctaatg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4523300 10 + 32716333 ggtcctaatg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155476243 10 - 185818997 ggtcctaatg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162300432 10 - 192294377 ggtccTAATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8781207 10 + 9440265 ggtcctaatg i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr2 15084735 10 - 90373283 ggtcctaatg i chlSab2.chr2 C 0 C 0 e colAng1.NW_012120598v1 268816 10 - 13750039 I e cerAty1.NW_012002954v1 8511142 9 + 21915920 I e manLeu1.NW_012102865v1 2269989 9 + 4234846 I a score=15183013.000000 s hg38.chr21_KI270874v1_alt 154093 2714 + 166743 cctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctatccctggtgcttttctagtttctcctataaggatgatttctaatataga------------------ttttgggactctgttcccttcttcaggcacccaggcttacaaatcagaaagagccgaattcttcaacaggaaataggtgccctggggcacataatttttgcccagagccctgttgcaggtggaactatctggaattttaggatccctcctcaggctagcaggcctaacaaaggctattcttgaagctaggatatggggagtctcagaaattatagactgcaaaattgggggaatatccttcctattcatatgatgagaagtgaggacaaaaggcatcacttttccaatcctggagatccctttcctccctcaaggtatggccctccactccattttgaggcatatcatctttataggacaaggttaagttcccaataccaacaggagaaaatgcttaggactctaacaggttttcaagaatgcatcagtaagggccactaaatctgacctttcttggccctctttgttgtctaggaggaaaataagtgtttccactgctgctttggtgagcacaactattctgaatagtagggtccagggaccattgcaggttctggggtggg-aaaaaacagatcaaaactgcaggcggttttttgttctgttttagatgggaaacactcaggcatcaacgagctcacccttgaaatgcatcctaagccattgggaccaatttgacccacaaaccctgaaaaagaagcagcttatttttttctgcactatagcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcatcttgaccttttctgtaagagggaaggcaaatgttgtgaaataccttatgtccaagctttctttttattgaaggataatccacaactatgcaaagcttacaatctatatcccacaggaagacctctcagcttatccccatattctagccttcctacagctccccttcctattagtggtgagcctcctctaatctcccccactgagatggaaacaagcaaagaaatatccatgggaccat-aaaa-----------cccccaggctattggttatgtccccttcaagctgaaaggggaggggaatttggcccaacccaggtacatgacccc-tcctccctctctgatttaaagcaaatcaaggtagacctggggaagttttcagat-accctgataggtacacatatgtcctacggggtctagggcaaaccttcaacctcacttggagagctgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtttggagatacatggtatcttagtcaggttaatgatagaatgacagctgaagaaagggacaaattctctactgatcagcaagccatagccagtatggatccccactgggacctccactcaggtcatggggactagggttgcaaatatctgttgacctgtgtcaatgaagaagacttaggaaaaagcccatgaattattcaatgatgtccaccataactcagggaaaggaagaaaatcctaccaccttccttgagtggctacaggaggccttaagacaatataccctcctgtcacttgattccctcaagggtcagttgatcctaaaggataactttattacccaatcagctgcagatatcaggagaaagctcctaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctagaaatctcagtgttctataaaagggaccaagaggagcaggccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatggccctcagacaaacaaaccttgg-tagttcagagaggacaggaaatggagcaggccaatcacctggcagggcttgttatcagcgtgggttgcaaggacactttaaaaaagattgtccagtgagaaacaagccacccccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctctctgggccagaagcccccaatcagatgatccaacaacaggactgagggtgcctggggcaagtgccagctcatgtcatcaccctcagtgagacccaggtaagtttaaccactgaaggccaggaaattcacttcctcctggacactagcgtggccttctcagtgttaatctcctgccctggacggctttcttcaaggtccattaccatccaaggaatcctgggacagcctgtaaacaggtagttctcccaccttctcagttgtaattgggagaatttgcccttttcacgtgcctttcttgttatgcctggaagtgccacacccttatta---gggagg--aacatattagccattgctattatctacatgaatatgggggacaagttacccatttgttgtcccctacttgaggagggaatcaaccctgaagtctgggcattggaaggacaattcagaagggcaaaaaatgcccacccagttcaaatctagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctgaagctcgtaaaggattaaaggatactgttagacatttaaaagctcaag s panTro5.chr21 3778862 2714 + 33445071 cctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctatccctggtgcttttctagtttctcctataaggatgatttctaatataga------------------ttttgggactctgttcccttcctcaggcacccaggcttacaaatcagaaagagccgaattcttcaacaggaaataggtgccctggggcacataatttttgcccagagccctgttgcaggtggaactatctggaattttaggatccctcctcaggctagcaggcctaacaaaggctattcctgaagctaggatatggggagtctcagaaattatagactgcaaaattgggggaatatccttcctattcatatgatgagaagtgaggacaaaaggcatcacttttccaattctggagatccctttcctccctcaaggtatggccctccactccattttgaggcatatcatctttataggacaagtttaagttcccaataccaacaggagaaaatgcttaggactctaacaggttttcaagaatgcatcagtaagggccactaaatctgacctttcttggtcctctttgttgtctaggaggaaaataagtgtttccactgctgctttggtgagcgcaactattctgaatagtagggtccagggaccattgcaggttcttgggtgggaaaaaaacagatcaaaactgcaggcagttttttgt--tgttttagatgggaaacactcaggcatcaacgagctcacccttgaaatgcatcctaagccattgggaccaatttgacccacaaagcctgaaaaagaagcagcttatttttttctgcactatagcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttctgtaagagggaaggcaaatggtgtgaaataccttatatccaagctttctttttattgaaggataatccacaactatgcaaaacttacaatctacatcccacaggaggacctctcagcttatccccatattctagccttcctacagctccccttcctattagtggtgagcctcctctaatctcccccactgagatggaaacaggcaaagaaatatccaagggaccat-aaaa----------ccccccaggctattggttatgtccccttcaagctgaagggggaggggaatttggcccaacccaggtacatgacccc-tcctccctctctgatttaaagcaaatcaaggtagacctggggaagttttcagat-accctgataggtacacagatgtcctacagggtctagggcaaaccttcaacctcacttggagagctgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcggcccaagagtttggagatacctggtatcttagtcgggttaatgatagaatgacagctgaagaaagggacaaattccctgctgatcagcaagccatagccagtatggatccccactgggacctccattcaggtcatggggactagggttgcaaacatctgttgacctgtgtcaatgaggaagaattaggaaaaagcccatgaattattcaatgatgtccaccataactcagggaaaggaagaaaatcctaccaccttccttgagcggctacaggaggccttaagacaatatacccccctgtcattcgattccctcaagggtcagttgatcctaaaggataagtttattacccaatcagctgcagatatcaagagaaagctccaaaagatagccctgggtcctgaacaaaatttagaggcattattaaacctagaaatctcagtgttctataaaagggaccaagaggagcaggccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatggccctcagacaaacaaaccttgg-tagttcagagaggacaggaaatggagcaggccaatcacctggcagggcttgttatcagcgtgggttgcaaggacacttttaaaaagattgtccagtgagaaacaagccacccccttgcctatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctctctgggccagaagcccccaatcagatgatccaagaacaggactgagggtgcctggggcaagtgccagctcatgtcatcaccctcagtgagacccaggtaagtttaaccactgaaggccaggaaattcacttcctcctggacactagcgtggccttctcagtgttaatttcctgccctggatggctttcttcaaggtccattaccatccaaggaatcctgggacagcctgtaaacaggtagttctcccaccttctcagttgtaattggaagaatttgcccttttcacgtgcctttcttgttatgcctggaagtgccacacccttatta---gggagg--gacatattagccattgctattatctacatgaatatgggggacaagttacccatttgttgtcccctacttgaggagggaatcaaccctgaagtctgggcattggaaggacaattcagaagggcaaaaaatgcccacccagttcaaatctagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctgaagctcgtaaagcattaaaggatattgttagacatttaaaagctcaag i panTro5.chr21 C 0 C 0 s panPan2.chr21 17404241 2714 + 46275980 cctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctatccctggtgcttttctagtttctcctataaggatgatttctaatataga------------------ttttgggactctgttcccttcctcaggcacccaggcttacaaatcagaaagagccgaattcttcaacaggaaataggtgccctggggcacataatttttgcccagagccctgttgcaggtggaactatctggaattttaggatccctcctcaggctagcaggcctaacaaaggctattcctgaagctaggatatggggagtctcagaaattatagactgcaaaattgggggaatatccttcctattcatatgatgagaagtgaggacaaaaggcatcacttttccaattctggagatccctttcctccctcaaggtatggccctccactccattttgaggcatatcatctttataggacaaggttaagttcccaataccaacaggagaaaatgcttaggactctaacaggttttcaagaacgcatcagtaagggccactaaatctgacctttcttggtcctctttgttgtctaggaggaaaataagtgtttccactgctgctttggtgagcgcaactattctgaatagtagggtccagggaccattgcaggttcttgggtgggaaaaaaacagatcaaaactgcaggcagttttttgt--tgttttagatgggaaacactcaggcatcaacgagctcacccttgaaatgcatcctaagccattgggaccaatttgacccacaaagcctgaaaaagaagcagcttatttttttctgcactatagcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttctgtaagagggaaggcaaatggtgtgaaataccttatatccaagctttctttttattgaaggataatccacaactatgcaaaacttacaatctacatcccacaggaggacctctcagcttatccccgtattctagccttcctacagctccccttcctattagtggtgagcctcctctaatctcccccactgagatggaaacaggcaaagaaatatccaagggaccat-aaaa----------ccccccaggctattggttatgtccccttcaagctgaagggggaggggaatttggcccaacccaggtacatgacccc-tcctccctctctgatttaaagcaaatcaaggtagacctggggaagttttcagat-accctgataggtacacagatgtcctacagggtctagggcaaaccttcaacctcacttggagagctgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtttggagatacctggtatcttagtcaggttaatgatagaatgacagctgaagaaagggacaaattccctgctgatcagcaagccatagccagtatggatccccactgggacctccattcaggtcatggggactagggttgcaaacatctgttgacctgtgtcaatgaggaagaattaggaaaaagcccatgaattattcaatgatgtccaccataactcagggaaaggaagaaaatcctaccaccttccttaagcggctacaggaggccttaagacaatatacccccctgtcattcgattccctcaagggtcagttgatcctaaaggataagtttattacccaatcagctgcagatatcaggagaaagctccaaaagatagccctgggtcctgaacaaaatttagaggcattattaaacctagaaatctcagtgttctataaaagggaccaagaggagcaggccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatggccctcagacaaacaaaccttgg-tagttcagagaggacaggaaatggagcaggccaatcacctggcaggacttgttatcagcgtgggttgcaaggaaactttaaaaaagattgtccagtgagaaacaagccacccccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctctctgggccagaagcccccaatcagatgatccaacaacaggactgagggtgcctggggcaagtgccagctcatgtcatcaccctcagtgagacccaggtaagtttaaccactgaaggccaggaaattcacttcctcctggacactagcgtggccttctcagtgttaatttcctgccctggatggctttcttcaaggtccattaccatccaaggaatcctgggacagcctgtaaacaggtagttctcccaccttctcagttgtaattggaagaatttgcccttttcacgtgcctttcttgttatgcctggaagtgccacacccttatta---gggagg--gacatattagccattgctattatctacatgaatatgggggacaagttacccatttgttgtcccctgcttgaggagggaatcaaccctgaagtctgggcattggaaggacaattcagaagggcaaaaaatgcccacccagttcaaatctagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctgaagctcgtaaagcattaaaggatattgttagacatttaaaagctcaag i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3343094 2709 - 13858734 cctgtcatacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctatccctggtgcttttctagtttctcctataagaatgatttctaatataga------------------ttttgggactctgttcccttcttcaggcacccaggcttacaaatcagaaagagccgaattcttcaacaggaaataggtg-cctggggcacataatttttgcccagagccctgttgcagggggaactatctggaattttaggatccctcctcaggctagcaggcctaacaaaggctattcttgaagctaggatatggggagactcagaaattatagactgcaaaattgggggaatatccttcctattcatatgat---aagtgaggacaaaaggcatcacttttccaatcctggagatccctttcctccctcaaggtatggccctccactccattttgaggcatatcatctttataggacaaggttaaggtcccaataccaacaggataaaatgcttaggactctaacaggttttcaagaatgcatcagtaagggccactaaatctgacctttcttggtcctctttgttgtctaggaggaaaataagtgtttccactgctgctttggtgagcgcaactattctgaatagtagggtccagggaccattgcaggttcttgggtggg-aaaaaacagatcaaaactgcaggtggttttttgttctgttttagatggaaaacactcaggcatcaacaagctcacccttgaaatgcatcctaagccattgggaccaatttgacccacaaaccctgaaaaagaagcagcttatttttttctgcactatagcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttctgtaagagggaaggcaaatggtgtgaaataccttatgtccaagctttctttttattgaaggataatccacaactatgcaaaacttacaatctacatcccacaggaggaactctcagcttatccccatattctagccttcctgcatctccccttcctattaatggtgagcctcctctaatctcccccactgagatggaaacaagcaaagaaatatccaagggaccat-aaac-----------cccccagactattggttatgtccccttcaagctgtagggggaggggaatttggcccaacccaggtacatgacccc-ttctccctctctgatttaaagcaaatcaaggtagacctagggaagttttcagat-accctgataggtacacagatgtccta-ggggtctagggcaaaccttcaacctcacttggagagctgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtttggagatacctggtatcttagtcaggttaatgatagaatgacagctgaagaaagggacaaattccctactgatcagcaagccatagccagtatggatccccactgggacctccactcaggtcatggggactagggttgcaaacatctgttgacctgtgtcaatgaagaagaattaggaaaaagcccatgatttattcaatgatgtccaccataactcagggaaaggaagaaaatcctaccaccttccttgagcggctacaggaggccttaagacaatatacccccctgtcactcgattccctcaagggtcagttgatcctaaaggataagtttattacccaatcagctgtagatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctagaaatctcagtgttctataaaagggaccaagaggaacaggccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatagccctcagacaaacaaactttgg-tagttcagagaggacaggaaatggagcaggccaatcacctggcaggccttgttatcagtgtgggttgcaaggacactttaaaaaagattgtccagtgagaaacaagccacccccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgctccagaggacaaaggctctctgggccagaagcccccaatcagatgatccaacaacagaactgagggtgcctggggcaagtgccagctcatgtcatcaccctcagtgagacccaggtaagtttaaccattgaaggccaggaaattcacttcctcctggacaccagcatggccttctcagtgttaatctcctgccctggatggcttccttcaaggtccattaccatccaaggaatcctgggacagcctgtaaacaggtagttctcccaccttctcagttgtaattggaagaatttgcccttttcacatgcctttcttgttatgcctggaagtgccacacccttatta---gggagg--gacatattagccattgctattatctacatgaatatgggggacaagttacccatttgttgtcccctacttgaggagggaatcaaccctgaagtctgggcattggaaggacaattcagaagggcaaaaaatgcccacccagttcaaatctagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctgaagcttgtaaaggattaaaggatattgttagacatttaaaagctcaag i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4523310 2713 + 32716333 cctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctatccctgatgcttttctagtttctcctataagaatgatttctaatacaga------------------ttttgggactctgttcccttcttcaggcacccaggcttacaaatcagaaagagccaaattcttcaaagggaaataggcaccctggggcacataatttttgcccagagccctgttgcagggggaactatctggaattttaggatccctcctcaggctagcaggcctaacaaaggctattcctaaagctaggatttggggagactc-gaaattatagactccaaaattggggagatatccttcctagtcatatgatgagaagtgaggacaaaagacatcacttttccaatcctggagatccctttcctccctcaaggtatggccctccactccattttgaggcatatcatctttataggacaaggttaaggtcccaataccaacaggagaaaatgcttaggactctaacaggttttcaagaatgcatcagtaagggccactaaatccaacctttcttggtcctctttgttgtctaggaggaaaataagtgtttccactgctgctttggtgagcgcaactattctgaatagtagagtccagggaccattgcaggttcttgggtggg-aaaaaacagaccaaaactacaggtggttttttgttctgttttagatgggaaacactcaggcatcaacaagctcacccttgaaatgcatcctaagccattgggaccaatttgacccataaaccctgaaaaagaagcagcttatttttttcttcactatagcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcatgcagcttgaccttttctgtaagagggaaggcaaatggtgtgaaataccttatgtccaagcttactttttattgaaatataatccacaactatgcaaagcttacaatctacatcccacaggaggacctctcagcttatccccatattctagcctccctacagctccccttcctattaatggtgagcctcctctaatctcccccactgagaaggaaacaagcaaagaaatatccaagggaccat-aaaa----------ccccccaggctattggttatgtccccttcaagctgtagggggaggggaatttggcccaatccaggtacaagaccccttcctccctccctgatttaaagcaaatcaaggtagacctagggaagttttcagat-accctgataggtacacagatgtcctttggggtctagggcaaaccttcaacctcacttggagagctgtcatgctattgttagaacaaa--ctggcttttagtgaaaagaatgtggctttagctgcagcccaagagtttggagatacctggtatcttagtcaagtaaatgacagaatgacagctgaagaaagggacaaatttcctactgatcagcaagccattgccagtatggatccccactgggacctccactcaggtcatggggactagggtagcaaacatctgttgacctgtgtcaatgaagaagaatcaggaaaaagcccatgaattattcaatgatgtccaccataactcagggaaaggaagaaaatcctaccaccttccttgagcggctacaggaggccttaagaaaatatagccccctgtcattcaattccctcgagggtcagtcgatcctaaaagataagtttattacccaatcagctgcagatatcaggagaaagctccaaaggctagccctaggtcctgaacaaaatttagaggcattattaaacctggcaatctcggtgttgtgtaaaagggaccaagaggagcaggccaaaaaggaaaagtgagataagagaaaggccacagccttagttatggccctcagacaaacaaaccttgg-tagttcagagaggacagaaaatggagcaggccaatcacccggtagggcttgttatcagtgtgggttgcaaggacactttaaaaaagattgtccaatgagaaacaagccacccccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgccccagacgacaaaggctgtctgggccagaagcccccaatcagatgatccaacaaaaggactgagggtgcctggggcaagtgccagctcatgtcatcaccctcactgagacccaggtaagtttaaccattgaaggccaggaaattcacttcctcctggacactagcacagccttctcagtgttaatctcctgctctggacagctgtcttcaaggtccattaccatccgaggaatcctagaacagcctataaacaggtagttctcccaccttctcagttgtaattggaagactttgcccttttcacatgcctttcttgttatgcctggaagtgccacacccttatta---gggagg--gacatattagccaatgttattatctacatgaatatgggggacaagttacccatttgttgtcccctacttgaggagggaatcaaccctgaagtctgggcattggaaggacaattcagaatggcaaaaaatgcccacccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctgaagctcataaaggattaaaggatattgttagacatttaaaagctcaag i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155476253 2717 - 185818997 cctgtcagacaaactttctctcacctctcttctccgaggctagtcctgcttctaaaaatcactccttgtccctggtgctctactaatttctcctataagaatgatttctaatacaga------------------ttttgggactctgttcccttcttcaggcacccaggttcacaaatcagaaagagccaaattcttcaatgggaaataggtgccctggggcacataatttttgcccagagccctgctgctgggggtactatctggaattttaggatccctcctcagactagcaggcctaacaaaggctattcctgaagctaggatatgcggagactcagaaattatagactccaaaattggggagatatcc-----attcgtatgataagaagtgaggacaaaagatgtcacttatccagtcctggagatcgcttccctccctcaaggtatggccctccactccatgttgaggcatatcatctttataggacaaggttagggtcccaataccaacaggagaaaatgcttaggactctaacaggttttcgagaatgcatcagtaagggccactaaatcagacctttctcagtcctctttgtggtctaggaggaaaataagtgtttctgctgctgcttcggtgagtgcaactattccgaatagtagggtccagggaccattgcaggttcttgagtggg-aaaaaacagaccaaaaccacgggcggttttcctt-ctgttttagatgggata----taggcatcaataagctcacccttgaaatgcaccctaagccattgggaccaatttgacccacaaaccctgaaaaagaagcagcttatttttttctgcactatggcctggctccaatcttctctccctgatggggaaaaatggccacctgagggaagtataaattatactactatcctgcagcttgaccttttcagtaagagggaaggcaaatggtgtgaaataccttatgtccaagttttctttttattgaaggataatccacaactatgcaaagcttacaatctacattccacaggaggaactctcagcttacctccatattctagcctccctacagctccccttcctattaatgatgagcctcctctaatctcccacacccagaagcaaacaagcaaataaatctccaagggaccat-aaccaccccccct-ccccgcaggttatcgattatgtccccttcaagctgtagggggaggggaatttggcccaacctaggtacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagatgatgctgatagttatatagatgtcttacagggtctagggcaaatcttcaacctcactagaagtgatgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtatggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattcctaactgagcagcaagccatctccagtatggatccccactgggacttccactcaggtcatggggactagagtcgcaaacatctgttgacctgtgtcaacaaagaagaattaggaaaaatcccatgaattattcagtgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggaggcctgaagaaaatatactcccctttcacttgattccctcgagggtcagttgattctaaaagaaaaatgtattacccaatcagctgaagatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctggtaacctcggtgttctataatagggaccaagaggaagagaccaaaaaggaaaagtgaggtaagagaaaggccacagccttagtcatggcccccagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaggctaatcacccggtaggtcttgttatcagtgtgggttgcaaggatgctttaaaaaagattgtccagtgagaaacaagccacccccttgcccatgtctactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctttctgggccagaaaccccccaccagatgatccaacaacaggattgagggagcccaggacaagtgccagctcatgtcatcaccctcactgagccccaggtaagtttaaccattgagggccaggaaattcacttcctcctggacactgacaccaccttctcagtgttaatctcctgccccgaacagctgtcttcaaggtccattaccatccgaggaatcctgagacagcctgtaaacaggtatttctcccacctcctcagttgtaattgggagactttgccctttttacatgcctttcttgttatgcctggaagtgccacacccttattgggtgggggg--gacatattagccaaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgcccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatatcattagacatttaaaagctcaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162300442 2722 - 192294377 CCTGTCAGACAAACTTTCTCTCACCTCTCTTCTCCGAGGCTAGTCCTGCTTCTAAAAATCACTCCTTGTCCCTGGTGCTCTACTAATTTCTCCTATAAGAATGATTTCTAATACAGA------------------TTTTGGGACTCTGTTCCCTTCTTCAGGCACCCAGGTTCACAAATCAGAAAGAGACAAATTCTTCAATGGGAAATAGGTGCCCTGGGGCACATAATTTTTGCCCAGAGCCCTGCTGCTGGGGGTACTATCTGGAATTTTAGGATCCCTCCTCAGACTAGCAGGCCTAACAAAGGCTATTCCTGAAGCTAGGATATGCGGAGACTCAGAAATTATAGACTCCAAAATTGGGGAGATATCCTTCCTATTCGTATGATAAGAAGTGAGGACAAAAGATGTCACTTATCCAGTCCTGGAGATCGCTTCCCTCCCTCAAGGTATGGCCCTCCACTCCATGTTGAGGCATATCATCTTTATAGGACAAGGTTAGGGTCCCAATACCAACAGGAGAGAATGCTTAGGACTCTAACAGGTTTTCGAGAATGCATCAGTAAGGGCCACTAAATCAGACCTTTCTCAGTCCTCTTTGTGGTCTAGGAGGAAAATAAGTGTTTCTGCTGCTGCTTCGGTGAGTGCAACTATTCCGAATAGTAGGGTCCAGGGACCATTGCAGGTTCTTGAGTGGG-AAAAAACAGACCAAAACCACGGGCGGTTTTCctt-ctgttttagatgggata----taggcatcaataagctcacccttgaaatgcaccctaagccattgggaccaatttgacccgcaaaccctgaaaaagaagcagcttatttttttctgcactatggcctggctccaatattctctccttgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttcagtaagagggaaggcaaatggtgtgaaataccttatgtccaagttttctttttattgaaggataatccacaactatgcaaagcttacaatctacattccacaggaggaactctcagcttacctccatattctagcctccctaaagctccccttcctattaatgatgagcctcctctaatctcccacacccagaaggaaacaagcaaataaatctccaagggaccataaaccacccccc---ccccgcaggttatcgattatgtccccttcaagctgtagggggaggggaatttggcccaacctaggtacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagatgatgctgatagttatatagatgtcttacagggtctagggcaaatcttcaacctcactaggagtgatgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtatggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattcctaactgagcagcaagccatctccagtatggatccccactgggacttccactcaggtcatggggactagagtcgcaaacatctgttgacctgtgtcaacaaagaagaattaggaaaaatcccatgaattattcagtgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggaggcctgaagaaaatatacccccctttcacttgattccctcgagggtcagttgattctaaaagaaaaatgtattacccaatcagctgaagatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctggtaacctcggtgttctataatagggaccaagaggaagagaccaaaaaggaaaagtgaggtaagagaaaggccacagccttagtcatggcccccagacaaacaaaccttggttggttcagagaggacagaaaatggaacaggctaatcacccggtaggtcttgttatcagtgtgggttgcaaggatgctttaaaaaagattgtccagtgagaaacaagccacccccttgcccatgtctactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctttctgggccagaaacccccaaccagatgatccaacaacaggactgagggagcccaggacaagtgccagctcatgtcatcaccctcactgagccccaggtaagtttaaccattgagggccaggaaattcacttcctcctggacactgacaccaccttctcagtgttaatctcctgccccaaacagctgtcttcaaggtccattaccatccgaggaatcctgagacagcctgtaaacaggtatttctcccacctcctcagttgtaattgggagactttgccctttttacatgcctttcttgttatgcctggaagtgccacacccttattcggtgggggg--gacatattagccaaagctattgtctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgcccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatatcattagacatttaaaagctcaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8781217 2716 + 9440265 cctgtcagacaaactttctctcacctctcttctccgaggctagtcctgcttctaaaaatcactccttgtccctggtgctctactaatttctcctataagaatgatttctaatacaga------------------ttttgggactctgttcccttcttcaggcacccaggttcacaaatcagaaagagccaaattcttcaatgggaaataggtgccctggggcacataatttttgcccagagccctgctgctgggggtactatctggaattttaggatccctcctcagactagcaggcctaacaaaggctattcctgaagctaggatatgtggagactcagaaattatagactccaaaattggggagatatccttcctattcgtatgataagaagtgaggacaaaagatgtcacttatccagtcctggagatcgcttccctccctcaaggtatggccctccactccatgttgaggcatatcatctttataggacaaggttagggtcccaataccaacaggagaaaatgcttaggactctaacaggttttcgagaatgcatcagtaagggccactaaatcagacctttctcagtcctctttgtggtctaggaggaaaataagtgtttctgctgctgcttcggtgagtgcaactattccgaatagtagggtccagggaccattgcaggttctt-aatggg-aaaaaacagaccaaaaccacaggcggttttcctt-ctgttttagatgggata----taggcatcaataagctcacccttgaaatgcaccctaagccattgggaccaatttgacccgcaaaccctgaaa---aagcagcttatttttttctgcactatggcctggctcccatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttcagtaagagggaaggcaaatggtgtgaaataccttatgtccaagttttctttttattgaaggataatccacaactatgcaaagcttacaatctacattccacaggaggaactctcagcttacctccatattctagcctccctacagctccccttcctattaatgatgagcctcctctaatctcccacacccagaaggaaacaagcaaataaatctccaagggaccat-aaccccccccg---ccccgcaggttatcgattatgtccccttcaagctgtagggggaggggaatttggcccaacctaggtacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagaagatgctgatagttatatagatgtcttacagggtctagggcaaatcttcaacctcactaggagtgatgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtatggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattcctaactgagcagcaagccatctccagtatggatccccactgggacttccactcaggtcatggggactagagccgcaaacatctgttgacctgtgtcaacaaagaagaattaggaaaaatcccatgaattattcagtgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggaggcctgaagaaaatatactcccctttcacttgattccctcgagggtcagttgattctaaaagaaaaatgtattacccaatcagctgaagatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctggtaacctcggtgttctataatagggaccaagaggaagagaccaaaaaggaaaagtgaggtaagagaaaggccacagccttagtcatggcccccagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaggctaatcacccggtaggtcttgttatcagtgtgggttgcaaggatgctttaaaaaagattgtccagtgagaaacaagccaaccccttgcccatgtctactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctttctgggccagaaacccccaaccagatgatccaacaacaggactgagggagcccaggacaagtgccagctcatgtcatcaccctcactgagccccaggtaagtttaaccattgagggccaggaaattcacttcctcctggacactgacaccaccttctcagtgttaatctcctgccccgaacagctgtcttcaaggtccattaccatccgaggaatcctgagacagcctgtaaacaggtatttctcccacctcctcagttgtaattgggagactttgccctttttacatgcctttcttgttatgcctggaagtgccacacctttattgggtgggggg--gacatattagccaaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgcccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatatcattagacatttaaaagctcaag i macNem1.NW_012019910v1 C 0 C 0 s cerAty1.NW_012002954v1 8511151 2691 + 21915920 cctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctgtccctggtgctctactagtttctcctataagaatgatttctaatacaga------------------ttttgggactctgttcccttcttcaggcacccgggttcacaaatcagaaagagccaaattcttcgatgggaaataggtgcccaggggcacataatttttgcctagagccctgctgctgggggtaatatctggaattttaggatccctcctcagactcgcaggtctaacaaaggctattcctgaagctaggatatggggagactcagaaattatagactccaaaattggggagatatctttcctattcatatgatgagaagtgaggacaaaagacatcacttatccagccctggagatcccttccctccctcaaggtatggccctccactccatgttgaggcatatcgtctttataggacaaggttagggtcccaataccaacaggagaaaatgcttaggactctaacagattttcgagaatgcatcagtaagggccactaaatcagacctttctcagtcctctttgtggtctaggaggaaaataagtgtttctgctgctgcttcagtgagtgcaactaatccgaatagtagggtccagggaccattgcaggttcttgagtggg-aaaaaacagactaaaaccacgggcggttttcctt-ctgttttaggtgggaaacactcaggcatcaataagctcccccttgaaatgcatcctaagccattgggaccaatttgacccacaaaccctgaaaaagaagcagcttatttttttctgcactatggcctggctccaatattctctccctgatggggaaaaatggccacctaagggaagtataaattataatactatcctgcagcttcaccttttcggtaagagggaaggcaaatggtgtgaaataccttatgtccaagctttctttttattgaaggataatccacaactatgcaaagcttacaatctacattccacaggaggaactctcagcttacccccatattctagcctccctacagctccccttcctattaatgatgagcctcctctaatctc---cacccagaaggaaacaagcaaataaatctccaagggaccat-aaaa----------ccccccaggctatcggttatgtccccttcaagctgtagggggaggggaatttggcccaatccaggtacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagctttcagatgatcctgataggtacatagatgtcctacggggtctagggcaaaccttcgacctcactaggagtgatgtcatgctactgttagaacaaaccctggcttttaatgaaaagaatgtggctttagcttcagcccaagagtttggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattccttactgatcagcaagccatctccagtatggatccccactgggacttccactcaggtcatggggactagggtcgcaaacatctgttgacttgtgtcaacaaagaagaattaggaaaaagcccatgaattattcaatgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggagg------------------ccctttcactcaattccctcaagggtcagttgatcctaaaagaaaaatgtattacccaatcagctgaggatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctggcaacctcagtgttctataatagggaccaagaggaacggaccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatggcccccagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaggccaatcacccggtaggacttgttatcagtgtgggttgcaaggacgctttagaaaagattttccagtgagaaacaagccacccccttgcctatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggttctctgtgccagaaacccctaaccagatgatc---caacaggactgagggagcctagggcaagtgccagctcatgtcatcaccctcaatgagccccaggtaagtttaaccattgagggccaggaaattcacttccttctggacactgacactaccttctcagtgttaatctcctgccccgaacagctgtcttcaaggtccgttaccatccaaggaatcctgagacagcctgtaaagaggtgtttctcccacctcctcagttgtaattgggagactttgccctttttacatgcctttcttgttatgcctggaagtgccacacccttatta---gggggg--aacatattagccaaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaaggacaattcagaagggcaaaaaatgcctgcacagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatattgttagacatttaaaagctcaag i cerAty1.NW_012002954v1 I 9 N 0 s chlSab2.chr2 15084745 2723 - 90373283 cctgtcagac-aactttctCTCACCTCTCTTCTCCGACGCTAGTCCTGCTTCTAAAAA--ACTCCCTGTCCCTGGTGCTCTACTAGTTTCTCCTATAAGAATGATTTCTAATACAGA------------------TTTTGGGACTCTGTTCCCTTCTTCAGGCACCCGGGTTCACAAATCAGAAAGAGCCAAATTCTTCAATGGGAAATAGGTACCCTGGGGCACATAATGTTTGCCCAGAGCCCTGCTGCTGGGGGTACTATCTGGAATTTTAGGATCCCTCCTCAGACTAGCAGGCCTAACAAAGGCTATTCCTGAAGCTAGGATATGGGGAGACTCACAAATTATAGACTCCAAAATTGCGGAGATATCCTTCCTATTCATATGATGAGAAGTGACGACAAAAGACATCACTTATCAAGCCCTGGAGATCCCTTCCCTCCCTCAAGGTATGGCCCTCCACTCCGTGTTGAGGCATATCTTCTTCATAGGACAAGGTTAGGGTCCCAATACCAACAGGAGAAAATGCTTAAGACTCTAACAGGTTTTCGAGAATGCATCAGTAAGGGCCACTAAATCAGACCTTTCTCAGTCCTCTTTGTGGTCTAGGAGGAAAATAAGTGTTTCCACTGCTGCTTCGGTGAGTGCAACTATTCTGAATAGTAGGGTCCAGGGACCATTGCAGGTTCTTGAGTGGG-AAAAAACAGACCAAAACCACGGGCGGTTTTCCTT-CTGttttagatgggaaacactcaggcatcaataagctcacccttgaaatgcatcctaagccattgggaccaatttgacccgcaaaccctgaaaaagaagcagcttatttttttctgcactatggcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtgtaaattataatactatcctgcaacttgaccatttcagtaagagggaaggcaaatggtgtgaaataccttacatccaagttttctttttattgaaggataatccacaactatgcaaagttcgcaatctacattccacaggaggaactctcagcttacccccatattctagcctccctacagctccccttcctattaatgatgagcctcctctaatctcccacacccagaaggaaacaagcaaataaatctccaagggaccat-aaacccccccactcccccgcaggttatagattatgtccccttcaagctgcagggggaggggaatttggcccaacctaggtacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagatgatgctgatagttatatagatgtcttacagggtctagggcaaatcttcaacctcactaggagtgatgtcatgctattgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcggcccaagagtttggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattccttactgagcagcaagccatctccagtatggatccccactgggccttccactcaggtcatggggactagagtcgcaaacatctgttgacctgtgtcaacaaagaagaattaggaaaaatcccatgaattattcagtgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggaggcctgaagaaaatatactcccctttcacttgattccctcgagggtcagttgattctaaaagaaaaatgtattacccaatcagctgaagatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctggcaacctcggtgttctatagtagggaccaagaggaacagaccaaaaaggaaaagtgagataagagaaaggccacagccttagccatggcccccagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaggctaatcacgcggtaggacttgttatcagtgtgggttgcaaggacgctttaaaaaagattgtccagtgagaaacaagccacctccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctttctgggccagaaacccccaaccagatgatccaacaacaggactgagggagcccagggcaagtgccagctcatgtcatcaccctcactgagccccaggtaagtttaaccattgagggccaggaaattcacttcctcctggacactgacaccaccttctcagtgttaatctcctgccccaaacagctgtcttcaaggtccattaccatccgaggaatcctgagacagcctgtaaacaggtatttctcccacctcctcagttgtaattgggagactttgccctttttacttgcctttcttgttatgcctggaagtgccacacccttattg---gggggggtgacatattagccaaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgcccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatatcattagacatttaaaagctcaag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012102865v1 2269998 2690 + 4234846 cctgtcagacaaactttctctcacctctcttctccaaggctagtcctgcttctaaaaatcactccctgtccctggtgctctactagtttctcctataagaatgatttctaatacaga------------------ttttgggactctgttcccttcttcaggcacccgggttcacaaatcagaaagagccaaattcttcgatgggaaataggtgcccaggggcacatgatttttgcctagagccctgctgctgggggtactatctggaattttaggatccctcctcagactagcaggtctaacaaaggctattcctgaagctaggatatggggagactccgaaattatagactccaaaattggggcgatatctttcctattcatatgatgagaagtgaggacaaaagacgtcacttatccagccctggagatcccttccctccctcaaggtatggccctccactccatgttgaggcatatcatctttataggacaaggttagggtcccaataccaacaggagaaaatgcttaggactctaacaggttttcgagaatgcatcagtaagggccactaaatcagacctttctcagtcctctttgtggtctaggaggaaaataagtgtttctgctgctgcttcagtgagtgcaactaatccgaatagtaggggccagggaccattgcaggttcttgagtggg-aaaaaacagactaaaaccacgggcgattttcctt-ctgtttttggtgggaaacactcaggtatcaataagctcacccttgaaatgcatcctaagccattgggaccaatttgacccacaaaccctgaaaaagcagcagcttatttttttctgcactatggcctggctccaatattctctccctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttcggtaagagggaaggcaaatggtgtgaaataccttatgtccaagctttctttttattgaaggataatccacaactatgcaaagcttacaatctacattccacaggaggaactctcagcttacccccatattctagcctccctacagctccccttcctattaatgatgagcatcctctaatccc---cacccagaaggaaacaagcaaataaatctccaagggaccat-aaaacgccc----------caggctatcggttatgtccccttcaagctgtagggggaggggaatttggcccaatccaggtacatggcccc-ttctccctctctgatttaaagcagatcaagatagacctggggaagttttcagatgatcctgataggtacatagatgtcctacggggtctagggcaaaccttcaacctcactaggagtgatgtcatgctactgttagaacaaaccctggcttttaatgaaaagaatgtggctttagctgcagcccaagagtttggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattccttactgatcagcaagccatctccagtatggatccccactgggacttccactcaggtcatggggactagggtcgcaaacatctgttgacttgtgtcaacaaagaagaattaggaaaaagcccatgaattattcaatgatgtccaacataactcagggaaaggaagaaaatcctatcaccttccttgagtggctatgggagg------------------ccctttcactcaattccctcaagggtcagttgatcctaaaagaaaaatgtattacccaatcagctgaggatatcaggagaaagctccaaaagctagccctgggtcctgaacaaaatttagaggcattattaaacctggcaacctcagtgttctataatagggaccaagaggaatggaccaaaaaggaaaagtgagataaaagaaaggccacagccttagtcatggcccccagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaggccaatcacccgataggacttgttatcagtgtgggttgcaaggacgctttaaaaaagattgtccagtgagaaacaagccacctccttgcccatgtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggttctctgtgccagaaacccctaaccagatgatc---caacaggactgagggagcccagggcaagtgccagctcatgtcatcaccctcactgagccccaggtaagtttaaccattgagggccaggaaattcacttcctcctggacactgacactaccttctcagtgttaatctcctgccccaaacagctgtcttcaaggtccattaccatccaaggaatcctgagacagcctgtaaacaggtgtttctcacacctcctcagttgtaattgggagactttgccctttttacatgcctttcttgttatgcctggaagtgccacacccttatta---gggggg--aacatattagccaaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgctcagttcaaatcaagctaaaagaccccataacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatattgttagacatttaaaagctcaag i manLeu1.NW_012102865v1 I 9 C 0 s colAng1.NW_012120598v1 268826 2708 - 13750039 cctgtcagacaagctttctctcgcctctctgctctgaggctagtcctgcttctaaaaa----tccctgtccctggtgctctactagtttctcctataagaatgatttctaatacagattctcctataagaatgatttctaatactctgtttccttcttcaggcacccaggttcacaaatcagaaagagtcaaattcttcaatgggaaataggtgccctggggcacataatttttgcccagagccctgctgctgggggtactatctggaattttagtatccctcctcagactatcaggcctaacaaaggctattcctgaagctaggatatggggagactcagaaattatagactccaaaattgcggggatatccttcctattcatat--tgagaagtgaagacaaaagacgtcacttacccagccctggagatcccttccctccctcaaggtatggccctccactccatgttgaggcatatcatctttataggacaaggttagggtcccaataccaacaggagaaaatgcttaggactctaacaggttttcaagaatgcatcagtaagggccactaaatcagacatttctcagtcctctttgtggtctagggggaaaataagtgtttccgctgctgcttcggtgagtgcaattattccaaatagtagggtccagggaccattgcaggttcttgagtggg-aaaaaacagaccaaaaccacaggcggttttcctt-ctgttttagatgggaaacactcaggcatcaataagctcacccttgaaatgcatcctaagccattgggaccaatctgacctgcaaaccctgaaaaagaagcagcttatttttttctgctctatggcctggctccaatattctctctctgatggggaaaaatggccacctgagggaagtataaattataatactatcctgcagcttgaccttttcagtaagagggaaggcaaatggtgtgaaataccttatgtccaagctttctttgtattgaaggataatccacaactatgcaaagcttgcaatctacattccacaggaggaactctcagcttacccccatattctagcctccctacagctccccttcctattaatgttgagcctcctctaatctcccccacccagaaggaaacaagcaaataaatctccaagggaccat-aaaa----------ccccccaggctatcagttatgtccccttcaagctgtagggggaggggaatttggcccaacccaggtacatgaccct-ttctccctctctgatttaaagcaggtcaagatagacctggggaagttttcagatgatcctgataggtacatagatgtcctatggagtctagggcaaaccttcagcctcacttggagtgatgtcatgctattgctagaacaaaccctggcttttaaagaaaagaacgtggctttagctgcagcccaagagcttggagatacctggtatcttagtcaagtaaatgatagaatgacagctgaagaaagggacaaattccttactgatcagcaagccatctccagtatggatccccactgggacttccactcaggtcatggggactagggtcgcaaatatctgttgacctgtgtcaacaaagaagaattaggaaaaagcccacgaattattcaatgatgtccaacataactcagggaaaggaagaaaatactatcaccttccttgagtggctacgtgagg------------------ccctttcactcgattccctcaaggatcagttgattctaaaagaaaaatgtattacccagtcagctgaagatatcaggagaaagttccaaaagctagccctgggtcctgaataaaatttagaggcattattaaacccggcaacctcagtgttctataatagggaccaagaggaacagaccaaaaaggaaaagtgagataagagaaaggccacagccttagtcatggcccccagacaaacaaaccttgg-tggttcagagaggacagaaaatggaacaggccaatcacccggtaggacttgttatcagtgcaggttgcaaggacactttaaaaaagattgtccagtgagaaacaagccacccccttgcccaggtccactatgccaaggcaatcattggaaggtgcactgccccagaggacaaaggctttctgggccagaaacccccaaccagatgatccaacaacaggactgagggagcccagggcaagtgccagctcatgtcatcacccttactgagccccaggtaagtttaaccatggagggccaggaaattcacttcctcctgaacactgacactgccttctcagtgttaatctcctgccctgtacagctgtcttcaaggtccattaccatccgaggaatcttgagacagcctgtaaacaggtatttctcccacctcctcagttgtaattgggagactttgccctttttacacgcctttcttgttatgcctggaagtgccacacccttattg---gggggg--gacatattagccaaagctattatctacatgaatatgggggataagttacccatttgttgtcccctacttgaggagggagtcaaccctgaagtctgggcattggaagga-aattcagaagggcaaaaaatgcctgcccagttcaaatcaagctaaaagaccccatcacttttccttatcaaaggcaatatcccttaaggcctaaagttcataaaggattaaaagatattgttagacatttaaaagctcaag i colAng1.NW_012120598v1 I 10 C 0 a score=13651501.000000 s hg38.chr21_KI270874v1_alt 156807 3001 + 166743 tcttagtaagaaaattcagcagtccctgcaacaccccaattctaggaatacaaaaacaaaatggtcggtggagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccacctgtagccaacccctatacactgctctctcaaataccagagtcagcagaatggttcactgttctgatcctcaaggatgccttctgtattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagaccacacgtcccaacttacatggacagtcttgcctcaagattttagggatagccctcatctctttggtcaggcactggcccaaaatctaggccacttctcaagcccaggcactctggtccttcagtatgtggatgatttacttttggctaccagtttggaagcctcatgccagcaggctactctagatctcttgaactttgaagctaatcaaaggtacaaggtgtgtaaatcaaaggcccagctctgcctacaacaagtcaaatatctaggtctagtcttagccaga-gaaccagggccctcagcaaagaatgaatacagcctatactgacttgtcctcaccctaagacattaaaacagtcacgggggttccttgggatcaccagtttttgccaactatggatccccagatacagcgagatggccaggccactctatactc-aatcaaggagacccagagggcaaatactcatctagtataatgggaaccagaggcagaaacagctttcaaaaccttaaagcaggccctagtaccagctccagccttaagccttcccacaggacaaaacttctctttatacatcacaaagagagtgggaatagctcttggagtccttactcagactcaagggacaaccccacaaccagtggcatacttaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttat-ggtagttgtggcagtggtcatgttagtatcagaggctatcaaaataatacaaggaaaggatctcattgtctggacagctcgtgatgtaaatggcatactaggtgccaaaggaagtctatggctatcagacaactgtctgcttagataccaggcactactccctgaggaactggtgcttcaaatatgcatgtgtgtggccctcaaccctgccacttttctcccagaggatggggaaccaatcaagcatgactgcc-aacaaattgtagcccagacttttgctgttcaagaggatctcttagaggtccccttagctaatcctgaccttgccctatatatcgaaggaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagcctcttccccta-gggaccagcacccagttagcagaactagtggtgcttacctgagccttagaactgggaaaggaaaaaagaataaatgtatatacagtatttgtccatttcatctaataaataatctaatttgtttaatggcaaaaaatgtatatacagttag-caagtatgcttatctaattctacatgcttatgctgcaatatggaaagaaagggagttcctaacctctaggggaacccccattaaataccacaaggaaatcatggagttattgcatgcagtgcaaaaacccaaggaggtggcagtcttacactgctaaagccatcaaaaagatgaaggagaaaaggcagaaagaaactgtcgggcagaagctgagaccaaaattgctgccaggtggaacctcccattagaaatacctatggaaggaccctcggtatggaacaaccctctccaagaaattaagccccagtattccc-gtccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaagagggaaaagtactcatacccga----agccagccagtgggaaatacttaagaccctctgctaaaccttttatatgggtattgagaacattcatcaaatggccaaatccctatttacacagtcaattctcc-ccagaccatccggcaagtagtcaaagcctatgaggtgtgccaaaggaataatccattggtccatcataaggctcccctcggggaaacaaagaacaggtcactatcctggagaggattggcagttagacttcatccatatgcctaaatcaaggggatttcaatac---ttggtatgtgttgatacctttacaaattggatggaagccttcccttgcaagagagagaaagctcaggaagtggtt--agtcctaattcatgaaataattcctagatttgggcttccccaaaacttacaaagtgacaatggtccggcttttaaagccatgataactcagggaatttccagggcactagggatacaatatcaccttcagtgcacgtggaggccacaaacctcagggaaggttgagaaagcaaatg-aaacactcaagaggcacttaaggaaactaacacaagaaactcatctcccatggcctactttcttgcccatggccttgttgagaatctaaaattcccctcacaaaatggggctcagtccatatgaaatgctgtatggatgaccttttctcacaaatgacctcttacttgatcaggaaatggccaacttggtcaaagacataacttctttggaaaaataccaacaaaacattaaaaacctacctgaaggacatcacagagaaaagggaacagagttgttccaactgggagatctagtgttggtcaagtcccttccctctaccttcccatctatgaattccttgtgggaaggaccatactcagtaatcctctctactcccactgcagttaaggtagcaggaggggaatcttggattcaccacacccgagttaaactttggacaccccctgaggaacctgcaggaccatcagatcaggagtcccaagatcagccagaccagcctcaatacacctgtgaaccattggaggacttg s panTro5.chr21 3781576 3001 + 33445071 tcttagtaagaaaattcagcagtccctgcaacaccccaattctaggagtacaaaaacaaaatggtcagtggagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccagctgtagccaacccctatacactgctctctcaaataccagagtcagcagaatggttcactgttctgaacctcaaggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagaccatacgtcccaaattacatggacagtcttgcctcaagattttagggatagccctcgtctctttggtcaggcactggcccacaatctaggccacttctcaagcccaggcactctggtccttcagtatgtggatgatttacttttggctaccagtttggaagcctcatgccagcaggctactctagatctcttgaactttgaagctaatcaaaggtacaaggtgtgtaaatcaaaggcccagctctgcctacaacaagtcaaatatctaggcctagtcttagccaga-gaaccagggccctcagcaaagaatgaatacagcctatactgacttttcctcaccctaagacattaaaacagtcatgggggttccttgggatcaccagtttttgccaactatggatccccagatacagcgagatggccaggccactctatactc-aatcaaggagacccagagggcaaatactcatctagtataatgggaaccagaggcagaaacagccttcaaaaccttaaagcaggccctagtaccagctccagccttaagccttcccacaggacaaaacttctctttatgcatcacaaagagagtgggaatagctcttggagtccttactcagactcaagggacaaccccacaaccagtggcatacttaagtaaggaaactgatgtagcagcaaaaggctggcctcattgtttat-ggtagttgtggcagtggtcatgttagtatcagaggctatcaaaataatacaaggaaaggatctcattgtctggacagctcgtgatgtaaatggcatactaggtgccaaaggaagtctatggctatcagacaactgtctgcttagataccaggcactactccctgaggaacaggtgcttcaaatatgcatgtgtgtggccctcaaccctgccacttttctcccagaggatggggaaccaatcaagcatgactgcc-aacaaattgtagcccagacttttgctgttcaagaggatctcttagaggtccccttagctaatcctgaccttaccctatatattgaaggaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagcctcttccccta-gggaccagcatccagttagcagaactagtggtacttacctgagccttagaactgggaaaggaaaaaagaataaatgtatatacagtatttgtccatttcatctaataaataatctaatttgtttaatggcaaaaaatgtatatacagttag-caagtatgcttatctaattctacatgtttatgctgcaatatggaaagaaagggagttcctaacctctgggggaacccccattaaataccacaaggaaatcatggagctattgcatgcagtgcaaaaacccaaggaggtggcagtctgacactgctaaagccatcaaaaaggtgaaggagaaaaggcagaacgaaactgtcgggcagaagctgagaccaaaattgctgccaggtggaacctcccattagaaatacctatggaaggaccctcggtatggaacaaccctctccaagaaattaagccccagtattccc-gtccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaagagggaaaagtactcatacctga----agccagccagtgggaaatacttaagaccctccgctaaaccttttatatgggtattgagaacagtcatcaaatggccaaatccctatttacacagtcaattctcc-ccagaccatccagcaagtagtcaaagcctatgaggtgtgccaaaggaataatcccttggtccatcataaggctcccctgggggaaacaaagaacaggtcactatcctggagaggactggcagttagacttcacccatatgcctaaatcaaggggatttcaatac---ttggtatgtgttgatacctttacaaattggatggaagccttcccttgcaagagagagaaagctcaggaagtggtt--agtcctaattcatgaaataattcctagatttgggcttccccaaaacttacaaagtgacaatggtccggcttttaaagccatgataactcagggaatttccagggcactagggatacaatatcaccttcactgcacgtggaagccacaaacctcagggaaggttgagaaagcaaatg-aaacactcaagaggcacttaaggaaactaacacaagaaactcatctcccatggcctactctcttgcccatggccttgttgagaatctaaaattcccctcacaaaatggggctcagtccatatgaaatgctgtatggatgaccttttctcacaaatgacctcctacttgatcaggaaatggccaacttggtcaaagacataaattctttggaaaaataccaacaaaaccttaaaaacctacctgaaggatatcacagacaaaagggaacagagttgttccaaccgggagatctagtgttggtcaagtcccttccctctaccttcccatctatgaattccttgtgggaaggaccatactcagtaatcctctctactcccactgcagttaaggtagcaggaggggaatcttggattcaccaaacccgagttaaactttggacaccccctgaggaacctgcaggaccatcagatcaggagtcccaagatcagccagaccagcctcaatacacctgtgaaccattggaggacttg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17406955 2999 + 46275980 tcttagtaagaaaattcagcagtccctgcaacaccccaattctaggagtacaaaaacaaaatggtcggtggagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccagctgtagccaacccctatacactgctctctcaaataccagagtcagcagaatggttcactcttctgaacctcaaggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagaccatacgtcccaaattacatggacagtcttgcctcaagattttagggatagccctcatctctttggtcaggcactggcccaaaatct-ggccacttctcaagcccaggcactctggtccttcagtatgtggatgatttacttttggctaccagtttggaagcctcatgccagcaggctactctagatctcttgaactttgaagctaatcaaaggtacaaggtgtgtaaatcaaaggcccagctctgcctacaacaagtcaaatatctaggcttagtcttagccaga-gaaccagggccctcagcaaagaatgaatacagcctatactgacttttcctcaccctaagacattaaaacagtcatgggggttccttgggatcaccagtttttgccaactatggatccccagatacagcgagatggccaggccactctatactc-aatcaaggagacccagagggcaaatactcatctagtataatgggaaccagaggcagaaacagccttcaaaaccttaaagcaggccctagtaccagctccagccttaagccttcccacaggacaaaacttctctttatgcatcacaaagagagtgggaatagctcttggagtccttactgagactcaagggacaaccccacaaccagtggcatacttaagtaaggaaactgatgtagcagcaaaaggctggcctcattgtttat-ggtagttgtggcagtggtcatgttagtatcagaggctatcaaaataatacaaggaaaggatctcattgtctggacagctcgtgatgtaaatggcatactaggtgccaaaggaagtctatggctatcagacaactgtctgcttagataccaggcactactccctgaggaacaggtgcttcaaatatgcatgtgtgtggccctcaaccctgccacttttctcccagaggatggggaaccaatcaagcatgactgcc-aacaaattgtagcccagacttttgctgttcaagaggatctcttagaggtccccttagctaatcctgaccttaccctatatatcgaaggaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagcctcttccccta-gggaccagcacccagttagcagaactagtggtgcttacctgagccttagaactgggaaaggaaaaaagaataaatgtatatacagtatttgtccatttcatctaataaataatctaatttgtttaatggc-aaaaatgtatatacagttag-caagtatgcttatctaattctacatgcttatgctgcaatatggaaagaaagggagttcctaacctctgggggaacccccattaaataccacaaggaaatcatggagttattgcatgcagtgcaaaaacccaaggaggtggcagtctgacactgctaaagccatcaaaaaggtgaaggagaaaaggcagaaagaaactgtcaggcagaagctgagaccaaaattgctgccaggtggaacctcccattagaaatacctatggaaggaccctcggtatggaacaaccctctccaagaaattaagccccagtattccc-gtccaaaacagaatgaggactttcatgggggcatagttttctccccttggggtggttaatgacagaagagggaaaagtactcatacccga----agccagccagtgggaaatacttaagaccctctgctaaaccttttatatgggtattgagaacattcatcaaatggccaaatccctatttacacagtcaattctcc-ccagaccatccagcaagtagtcaaagcctatgaggtgtgccaaaggaataatcccttggtccatcataaggctcccctgggggaaacaaagaacaggtcactatcctggagaggactggcagttagacttcacccatatgcctaaatcaaggggatttcaatac---ttggtatgtgttgatacctttacaaattggatggaagccttcccttgcaagagagagaaagctcaggaagtggtt--agtcctaattcatgaaataattcctagatttgggcttccccaaaacttacaaagtgacaatggtccggcttttaaagccatgataactcagggaatttccaggtcactagggatacaatatcaccttcactgcacgtggaggccacaaacctcaaggaaggttgagaaaacaaatg-aaacactcaagaggcacttaaggaaactaacacaagaaactcatctcccatggcctactctcttgcccatggccttgttgagaatctaaaattcccctcacaaaatggggctcagtccatatgaaatgctgtatggatgaccttttctcccaaatgacctcctacttgatcaggaaatggccaacttggtcaaagacataacttccttggaaaaataccaacaaaaccttaaaaacctacctgaaggatatcacagagaaaagggaacagagttgttccaaccgggagatctagtgttggtcaagtcccttccctctaccttcccatctatgaattccttgtgggaaggaccatactcagtaatcctctctactcccactgcagttaaggtagcaggaggggaatcttggattcatcacacccgagttaaactttggacaccccctgaggaacctgcaggaccatcagatcaggagtcccaagatcagccagaccagcctcaatacacctgtgaaccattggaggacttg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3345803 2996 - 13858734 ttttagtaagaaaattcagcagtccctgcaacaccccaattctaggagtacaaaaacaaaatggtcggtggagactagtgcaagatcttagactcgtcaatgaggcagtaattcctctatatccagctgtagccaacccctatacactg--ctctcaaataccagagtcagcagaatggttcactgttctgaacctcaaggatgccttctgcattctcctgcactctgacttccagtttatctttgcctttgaggatcccacagaccacatgtcccaacttacatggacagtcttgcctcaagattttagggatagccctcatctgtttggtcaggcactggcccaaaatctaggccacttctcaagcccaggcactctggtccttcagtatgtggacgatttacttttggctaccagtttggaagcctcatgccagcaggctactctagatctcttgaactttgaagctaatcaaaggtacaaggtgtgtaaatcaaacgcccagctctgcctacaacaagtcaaatatctaggcttagtcttagctaga-gaaccagggccctcagcaaagaatgaatacagactatactgacttgtcctca-cctaaggcattaaaacagtcatgggggttccttgggatcaccagtttttgccaactatggatccccggatacagcgagatggccaggccactctatactc-taatcaagagacccagaggacaaatactcatctagtagaatgggaaccagaggcagaaatgaccttcaaaaccttaaagcaggccctagtaccagctccagccttaagccttcccacaggacaaaacttctctttatacatcacaaagagagtgggaatagctcttggagtccttactgagactcaagggacaaccccacaaccagtggcatacttaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttatgggtagttgtggcagtggtcatgttagtatcagaggctatcaaaataatacaaggaaaggatctcattgtctggactgctcatgatgtaaatggcatactaggtgccaaaggaagtctatggctaccagacaactgtctgcttagataccaggcactactccctgaggaactcgtgcttcaaatatgcatgtgtgtggccctcaaccctgccacttttctcccagaggatggggaaccaatcaagcatgactgcc-aacaaattgtagcccagacttaagctgttcaagaggatctcttagaggtccccttagctaatcctgaccttaacctatatatcaaaggaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaagctaagcctcttccccta-gggaccagcacccagttagcagaactagtggtgcttacctaagccttagaactgggaaaggaaaaaagaataaatgtatatacagtatttgtccatttcatctaataaataatctaatttgtttaatggcaaaaaatgtatatacagttag-caagtatgcttatctaattctacatgctcttgccgcaatatggaaagaaagggagttcctaacctctgggggaacccccattaaataccacaaggaaatcatggagttattgcatgcagtgcaaaaacccaaggaggcggcagtcttacatttctaaagccatcaaaaaggtgaacgagaaaaggcagaaagaaactgtcgggcagaagctgaggccaaaattgctgccaggt-gaacctcccattagaaatacctatggaaggaccctcggtatggaacaaccctctccaagaaattaagcccccgtattcct-gtccaaaacagaatggggactttcatgggggcatagttttctcccctcagggtggttaatgacaggagagggaaaagtactcatacccga----agccagccagtgggaaatacttaagaccctctgctaaaccttttatatgggtattgagaacattcatcaaatggccaaatccctatttacacagtcaattctcc-ccagaccatctggcaagtagtcaaa-cctgtgaggtgtgccaaaggaataatcccttggtccatcataaggctcccctgggg--aacaaagaacaggtcactatcctggagaggactggcagttagacttcacccatatgcctaaatcaaggggatttcaatacttgttggtatgtgttgatacctttacaaactggatggaagccttcccttgcaagagagagaaagctcaggaagtggtt--agtcctaattcatgaaataattcctagatttgggcttccccaaaacttacaaagcgacaatggtccagcttttaaagccatga-aactcagggaatttccagggcactagggatacaatatcaccttcactgcacgtggaggccacaaacctcagggaaggttgagaaagcaaatgaaaacactcaagaggca-ttaaggaaactaacacaagaaactcatctcccatggcctactctcttgcccatggccttgttgagaatccaaaattctcctcacaaaatggggcttagtccatatgaaatgctgtatggatgaccttttctcacaagtgacctcctacttgatcaggaaatggccaacttggtcaaagacataacttctttggaaaaataccaacaaaaccttaaaaacctacctgaaggatatcacagagaaaagggaacagagttgttccaaccgggagatctagtgttggtcaagtcccttccctctaccttcccatctatgaattccttgtgggaaggaccatactcactaatcctctctacccccactgcagttaaggtagcaggaggggaatcttggattcaccacacccgagttaagctttggaca-cccctgaggaacctgcaggaccgtcagatcaggagtcccaagatcagccagaccagcctcaatacacctgtgaaccactggaggacttg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4526023 3011 + 32716333 ccttagtaagaaaattcagcagtccctgtaacaccccaattctaggagtacaaaaacaaaatggtcagtggaaactagtgcgagatcttagactcatcaatgaggcagtaattcttctatatccagctgtagccaacccctataccctgctctctcaaataccagagtcagcagaatggctcactgttccggacctcaaggatgccatctgcattcccctgcactctgacttccagtttctctttgcctttgaggatcgcacagaccacacgtcccaccttacatggacggtcttgcctcaagggtttagggatagccctcatctgtttggtcaggcactggcccaaaatctaggccacttctcaagcccaggcactctggtccttcagtacgtggatgatttacttttggctaccagtttggaagcctcatgccagcaggctactctagatctcttgaactttcaagctaatcaagggtacaagatgtgtaaatcaaaggcccagttctgcctacaacaagtcaaatatctaggcctagtcttagccagaggaaccagggccctcagcaaagaaacaatacagcctatactggcttgtcctcaccctaagacattaaaacagtcacaggggttccttgggatcaccagtttttgccaactatggatcccctgatacagcgagatgg-gaggccactctatactctaatcaaggagacctagagggcaaatactcatctagtagaatgggaaccagaggcagaaacagacttcaaaaccttaaagcaggtcctagtaccagctccagccttaagccttcccacaggacaaaacttctctttatacatcacaaagagagtgagaatagctcttggagtccttacttagactcatggggcaaccccacaaccagtggcatacttaagtaaggaaattgatgtagtagcaaaagactggcctcattgtttatgggtagttgtggcagtggtcatgttagtatcagaggctatcaaaataatacaaggaaaggctctcactgtctggactgctcatgatgtaaatggcatactaggtgccaaaggaagtttatggctatcagacaaccgtctgcatagataccaggcactactccttgaggaactggtgcttcaaatatgcacgtgtgtggccctcaaccctgccacttttctcccagaggatggggaaccaatcgagcatgacagcc-aacaaattgtagcccagacttatgccattcaagaggatctcttagaggtccccttagctaatcctgaccttaatctatataccgatggaagttcatttatggagaatgggatatgaagggcaagttatgccgtagttagtgaagtaacagtacttgaaactaagcctcttccccta-gggaccaacacccagttcgcagaactagtggtgcttatccaagtcttagaactgggaaaggaaaaaagaacaaatgtatatacagtatttgtccatttcatctaataaataatctaaattgtttaatggaaaataatgtatatacagataa-caaatatgcttatctaattctacatgcccatgctgcaatatggaaagaaagggagttcctaacctctgggggaaaccccattaaataccacaaggaaatcatggagttatcgcatgcagtgcaaaaacccaaggaggtggcagtcttacactgctaaagccatcaaaaaggtgaaggaaaaaagccagaaggaaactgtcaggcagaatctgaggccaaaattgctgccaggcaggaactcccattagaaatatctatggaaggaccctcagtatggaacaaccctctccaagaaattaagccccagtgttccctgtccaaaacagaatggggactttcatggaagcatagttttctcccctcagggtggttaatgacagaatacggaaaagtacacatacctgaagccagccagccagtggaaaacacttaagaccctccgctaaaccttttatatgggtattgagaacattcatcaaatggccaagtccctatttacagggtcaaatctcctccagcccatccagcaagtagtcaaagcctgtgaggtgtgccaaaggaataatctcttggtccatcataaggcttccctgaggg-aacaaagaacaggtcactatcctggagatgactggcagttagacttcacccatatgactaaatcaaggggatttcaatacttgttggtctgtgttgataccttaaaaaattggatggaagccttcccttgcaagacagagaaggctaaggaagtggtt--agtcctaattcatgaaataattcctagatttgggcttccccaaaacttacaaagcaacaatggtccagcttttaaagctatgataactcagggaatttacagggcgctagggatacaatatcaccttcattgcacctggaggccacaatcctcagggaaggttgagaaagcaaatg-aaacactcaagaggaaattaaggaaactaacacaagaaactcatctcccatggcctactctcttgcccatggccttgttgagaatccaaaattctcctcacaaaatggggctcagtccatatgaaatgctgtatggatgaccttttctcacaaatgacctcctacttgatcaggaaactgccaatttggtcaaagatataacttctttggcaaaatatcaacaaaaccttaaaaacctacctgaaggatatcacagagaaaagggaacagagttgtttcaaccgggagatctagtgttggtcaagtcccttccctctacctccccatctatggactctttgtgggaaggaccatactctgtagtcctctctaccgccaccgcagttaaggtggcaggagtggaatcttggattgaccacacccgagttaaactttagacaccccctgaggaacctgcaggaccgtcagctcaggagtcccaagatcagccagaccagcctcgatacacctgtgaaccattggaggacttg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155478970 2945 - 185818997 ccttagtaagaaaattcagcagtccctgcaacaccccaattctagaagtacaaaagcaaaatcgtcagtagagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccagctatagccaaccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctgaaggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagacctcacatcccaacttacatggacagtctcgcctcaaggttttagggatggccctcatctgtatggtcaggcactggcccaaaatctaggccacttctcaagttcaggcactctggtccttcagtatgtggatgatttacttttggctaccaatttggaagcctcatgccagcaggctactctagatctcttgaactttctagctaatcaagggtacaaggtatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagggccctcagcaaagaatgaatacatcctatactggcttgttctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcgagatgaccaggccactctatactctaatcaaggaaacccagagggcaaatactcatctagtagaatgggaaccagaggcataaacagctttcaaaaccttaaagcaggccctagtttcagctccagccttaagccttcccacaggacaaaaattctctttatatatcacagagagagcaagaatagctcttggagtcctcactcagactcatggaacaacctcacaaccagcggcatatccaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttatgggtagttgcagcagtggccatgttagtatcagaggctatcaaaataatacaaggaaaggatctcactgtctgcactactcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagataccagacactactccttgagggaccggtgctaaaaatatgcacgtgtgtagccctcaactctgccacttttctcccagaggatggggaaccaattgagcatgtcagcc-aaaaaattgtagtccagacttacgccacccaagaggatctcttagaggttcccttagctaatcctgaccttaacctatataccgatagaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagccttttcccccc-gggaccagtgcccagttagtagaactagtggtgcttacccgagcctaagaactgggaaagg-aaaaagaata--------------------------------------------------------------aacgtatacacagatag-caagtatgcttatctaattctacatgcctatgctgcaatatggaaagaaagggagttcctaacctctgggggaacacccattatataccacaaggaaaccatggagttattgcacgccgtgcaaaaacccaaggaggtggcagtcttacactgctgaggccatcaaaaaagtgaaggaaaaaaggcagaaggaaactatcaggcagaagctgaggccaaaattgctgccaggtggaacctcccattagaaatacctatggaacgaccctcggtatggaacaaccctctccaagaaattaagccccagtatctcctgaccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaag-gggaaaagtacttataccgga----agccaaccagtggaaaatacgtaagaccttccactaactcttttatatgggtattgagaacattcatcaaatggccaaatccctatttacagggccaaatctcctccggaccatccggcaagtagtcaaagcatgtgaggtgtgccaaaggaataatcccttggtccatcgtaaggcccctctggggg-aacaaagaataggtcactatcctggagaggactggcagtcagacttcacccatatgcctaagtcaaggggatttcaatacttgttggtctgtgttaatacctttacaaattggatagaagccttcccttgcaagaaagagaaggctcaggaagtggttaaagtcctaattcatgaaataattcctagatttgggcttccccaaagcttacaaaatgtcaatggtccaacttgtaaagccatgataactcagggaatttccagggcgctagggatacaatatcacattcactgcacctgaaggccacaatcctcagggaaggttgagaaagcaaata-aaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatgggctactctcttgcccatgaccttgttgagaatccaaaattatcctcacaaaatggggttcagtccatatgaaatgctgcatggatgatcttttctcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttcttcagcaaaataacaacaaaacctttaaaaccttcctgaaggatgtcacagagaaaagcgaacagagttgttccaaccgggagatctagcgttcgtcaagtcccttccctctacct-ccaaactatggattccttgtgggaaggaccatactcagtaaccctctctacccgcactgcagttaaggtggcaggaggggaatcttggattcaccacaccgaagttcaactttggacaccccctgaggaacctgcaggaccgtcaggtcaggagtctcaagatcatccagaccagccttgatacacctgtgaaccactggaagacttg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 162303164 2929 - 192294377 ccttagtaagaaaattcagcagtccctgcaacaccccaattctagaagtacaaaagcaaaatggtcagtagagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccagctatagccaaccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctgaaggatgcctcctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagacctcacatcccaacttacatggacagtctcgcctcaaggttttagggatggccctcatctgtatggtcaggcactggcccaaaatctaggccacttctcaagttcaggcactctggtccttcagtatgtggatgatttacttttggctaccaatttggaagcctcatgccagcaggctactctagatctcttgaactttctagctaatcaagggtacaaggtatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagggccctcagcaaagaatgaatacagcctatactggcttgttctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcgagatgaccaggccactctatactctaatcaaggaaacccagagggcaaatacttatctagtagaatgggaaccagaggcataaacagctttcaaaaccttaaagcaggccctagtttcagctccagccttaagccttcccacaggacaaaaattctctttatatatcacagagagagcaagaatagctcttggagtcctcactcagactcatggaacaacctcacaaccagcggcatatccaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttatgggtagttgcagcagtggccatgttagtatcagaggctatcaaaataatacaaggaaaggatctcactgtctgcactactcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagataccagacactactccttgagggaccggtgctaaaaatatgcacgtgtgtagccctcaactctgccacttttctcccagaggatggggaaccaattgagcatgtcagcc-aaaaaattgtagtccagacttacgccacccaagaggatctcttagaggtccccttagctaatcctgaccttaacctatataccgatagaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagccttttcccccctgggaccagtgcccagttagtagaactagtggtgcttacccgagcctaagaactgggaaaggaaaaaagaata--------------------------------------------------------------aacgtatacacagatag-caagtatgcttatctaattctacatgcctatgctgcaatatggaaagaaagggagttcctaacctctgggggaacacccattaaataccacaaggaaaccatggagttattgcacgccgtgcaaaaacccaaggaggtggcagtcttacactgctgaggccatcaaaaaagtgaaggaaaaaaggcagaaggaaactatcaggcagaagctgaggccaaaattgctgccaggtggaacctcccattagaaatacctatggaacgaccctcggtatggaacaaccctctccaagaaattaagccccagtatctcctgaccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaag-ggggaaagtacttataccgga----agccgaccagtggaaaatacgtaagaccttccactaacccttttatatgggtattgagaacattcatcaaatggccaaatccctatttacagggccaaatctcctccggaccatcgggcaagtagtcaaagcatgtgaggtgtgccaaaggaataatcccttggtccacagtaaggcccctctggggg-aacaaagaataggtcactatcctggagaggactggcagtcagacttcacccatatgcctaagtcaaggggatttcaatacttgttggtctgtgttaataactttacaaattggatagaagccttcccttgcaagaaagagaaggctcaggaagtggttaaagtcctaattcatgaaataattcctagatttgggcttccccaaagcttacaaaatggcaatggtccaacttgtaaagccatgataactcagggaatttccagggcgctagggatacaatatcaccttcactgcacctgaaggccacaatcctcagggaaggttgagaaagcaaata-aaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatgggctactctcttgcccatgaccttgttgagaatccaaaattctcctcacaaaatggggttcagtccatatgaaatgctgcatggatgatcttttctcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttcttcagcaaaataacaacaaaaccttaaaaacctacctgaaggatgtcacagagaaaagcgaacagagttgttccaaccgggagatctagcgttcgtcaagtcccttccctctacctcccaaactatggattccttgtgggaaggaccatactcagtaaccctctctacccgcactgcagttaaggtggcaggaggggaatcttggattcaccacaccgaagttcaactttggacaccccctgaggaacctg---------caggtcaggagtc----------ccagaccagccttgatacacctgtgaaccactggaagacttg i macFas5.chr3 C 0 C 0 s macNem1.NW_012019910v1 8783933 2948 + 9440265 ccttagtaagaaaattcagcagtccctgcaacaccccaattctagaagtacaaaagcaaaatggtcagtagagactagtgcaaggtcttagactcatcaatgaggcagtaattcctctatatccagctatagccaaccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctgaaggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagacctcacatcccaacttacatggacagtctcgcctcaaggttttagggatggccctcatctgtatggtcaggcactggcccaaaatctaggccacttctcaagttcaggcactctggtccttcagtatgtggatgatttacttttggctaccaatgtggaagcctcatgccagcaggctactctagatctcttgaactttctagctaatcaagggtacaaggtatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagggccctcagcaaagaatgaatacagcctatactggcttgttctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcgagatgaccaggccactctatactctaatcaaggaaacccagagggcaaatactcatctagtagaatgggaaccagaggcataaacagctttcaaaaccttaaagcaggccctagtttcagctccagccttaagccttcccacaggacaaaaattctctttatatatcacagagagagcaagaatagctcttggagtcctcactcagactcatggaacaacctcacaaccagtggcatatccaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttatgggtagttgcagcagtggccatgttagtatcagaggctatcaaaataatacaaggaaaggatctcactgtctgcactactcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagataccagacactactccttgagggaccggtgctaaaaatatgcacgtgtgtagccctcaactctgccacttttctcccagaggatggggaaccaattgagcatgtcagcc-aaaaaattgtagtccagacttacgccacccaagaggatctcttagaggtccccttagctaatcctgaccttaa-ctatataccgatagaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagacttttcccccctgggaccagtgcccagttagtagaactagtggtgcttacccgagcctaagaactgggaaaggaaaaaagaata--------------------------------------------------------------aacgtatacacagatagccaagtatgcttatctaattctacatgcctatgctgcaatatggaaagaaagggagttcctaacctctgggggaacacccattaaataccacaaggaaaccatggagttattgcacgccgtgcaaaaacccaaggaggtggcagtcttacactgctgaggccatcaaaaaagtgaaggaaaaaaggcagaaggaaactatcaggcagaagctgaggccaaaattgctgccaggtggaacctcccattagaaatacctatggaacaaccctcggtatagaacaaccctctccaagaaattaagccccagtatctcctgaccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaag-gggaaaagtacttataccgga----agccgaccagtggaaaatacgtaagaccttccactaacccttttatatgggtattgagaacattcatcaaatggccaaatccctatttacagggccaaatctcctccggaccatccggcaagtagtcaaagcatgtgaggtgtgccaaaggaataatcccttggtccatcgtaaggcccctctgggga-aacaaagaataggtcactatcctggagaggactggcagtcagacttcacccatatgcctaagtcaaggggatttcaatacttgttggtctgtgttaatacctttacaaattggatagaagccttcccttgcaagaaagagaaggctcaggaagtggttaaagtcctaattcatgaaataattcctagatttgggcttccccaaagcttacaaaatggcaatggtccaacttgtaaagccatgataactcagggaatttccagggcgctagggatacaatatcaccttcactgcacctgaaggccacaatcctcagggaaggttgagaaagcaaata-aaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatgggctactctcttgcccatgaccttgttgagaatccaaaattctcctcacaaaatggggttcagtcaatatgaaatgctgcatggatgatcttttctcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttcttcagcaaaataacaacaaaaccttaaaaacctacctgaaggatgtcacagagaaaagcgaacagagttgttccaaccgggagatctagcgttcatcaagtcccttccctctacctcccaaactatggattccttgtgggaaggaccatactcagtaaccctctctacccgcactgcagttaaggtggcaggaggggaatcttggattcaccacaccgaagttcaactttggacaccccctgaggaacctgcaggaccgtcaggtcaggagtcccaagatcatccagaccagccttgatacacctgtgaaccactggaagacttg i macNem1.NW_012019910v1 C 0 C 0 s chlSab2.chr2 15087468 2947 - 90373283 ccttagtaagaaaattcagcagtccctgcaacaccccaattctagaagtacaaaagcaaaatggtcagtagagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatctccagctatagccaaccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctcagggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagaccacatgtcccaacttacatggacagtcttgcctcaaggttttagggatagccctcatctgtttggtcaggcactggcccaaaatctaagccacttctcaagttcaggaactctggtcctttagtatgtggatgatttacttttggctaccaatttggaagcctcatgccagcaggttactctagatctcttgaactttctagctaatcaagggtacaaggtatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagagccctcagcaaagaatgaatacagcctatactggcttgttctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcgagatgaccaggccactctatatgctaatcaaggaaacccagagggcaaatactcatctagtagaatgggaaccagaggcataaacagctttcaaaaccttaaagcaggccctagttccagctccagccttgagccttcccataggacaaaacttctctttatatatcacagagagagcaggaatagctcttagagtccttactcagactcatgggacaacctcacaaccagcagcatacctaagtaaggaaattgatgtagtagcaaaaggctggcctcattgtctatgagtagttgcagcagtggccatgttagtatcagaggctatcaaaataatacaaggaaaggatctcactgtctggactactcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagttaccagacgctactccttgagggaccagtgctaaaaatatgcacatgtgtagccctcagccctgccacttttctcccagaggatggggaaccaattgagcatgactgcc-aaaaaattgtagtccagacttatgccgcccaagaggatctcttagaggtccccttagctaatcctgaccttaacctatataccgatagaagttcatttatggagaatgggatacgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagcctctttccccctgggaccagtgcccagttagcagaactagtggtgcttacccgagcctaagaactgggaaagaaaaaaagaata--------------------------------------------------------------aatgtatacacagatag-caagtatgcttatctaattctacatgcccatgctgcaatatggaaagaaagggggttcctaacctctgggggaacccccattaaataccacaaggaaaccatggagttattgcacactgtgcaaaaacccaaggaggtggcagtcttacactgccgaggccatcaaaaaggtgaaggagaaaaggcagaaggaaactgtcaggcagaagctgaggccaaaattgctgccaggcggaacctcccattagaaatacctatggaacgaccctcggtatggaacaaccctctccaagaaattaagccccagtatctcctgatcaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaag-gggaaaagtactaatactgga----agccaaccagtggaaaatacataagaccatccactaacccttttatatgggtattgagaacattcatcgaatggccaaatccctatttacagggccaaatctcctctgggccatccggcaagtagtcaaagcatgtgagatgtgacaaaggaataatccattggtccatcgtaaggcccctctggggg-aacaaagaataggtcactatcctggagaggactggcagtcagacttcacccatatgcctaaatcaagggg-tttcaatacttgttggtctgtgttaatacctttacaaattggatagaagccttcccttgcgagaaagagaaggctcaggaagtggttaaagtcctaattcatgaaataattcctagatttgggcttccccaaagcttataaaatggcagtggtccaacttgtaaagccacgataactcagggaatttccagggcgctagggatacaatatcaccttcactgcgcctgaaggccacaatcctcagagaaggttgagaaagcaaatg-aaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatggcctactctcttgcccatgaccttgttgagaatccaaaattctcctcacaaaatggggttcagttcatatgaaatgctgtatggatgattttttctcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttctttggcaaaataacaacaaaaccttgaaaacctacctgaaggatgtcacagagaaaagcgaacagagttgttccaaccaggagatctagcgtttggcaagtcccttccctctacctcccaaactatggattccttgtgggaaggaccatactcagtaatcctctctacctgcactgcagttaaggtggcaggaggggaatcttgaattcgccacacccaagttcaactttggacaccccctgaggaacctgcaggaccgtcaggtcaggagtcccaagatcagccagaccagccttgatacacctgcaaaccactggaggacttg i chlSab2.chr2 C 0 N 0 s manLeu1.NW_012102865v1 2272688 2948 + 4234846 gcttagtaagaaaattcagcagtccctgcaacaccccaattctaggagtacaaaaccaaaatgatcagtggagactagtgcaagatcttagactcatcagtgaggcagtaattcctctatatccagctatagccaaccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctcaaggatgccttctgcattctcctgcactctgactcccagtttctctttgcctttgaggatcccacagacctcacgtcccaacttacatggacagtctcacctcaaggttttagggatagccctcatgtgtatggtcaggcactggcccaaaatctaggccacttctcaagttcaggcactctggtccttcagtatgtggatgatttacttttggctaccaatttggaagcctcatgccagcaggctactctagatctcttgaactttctagctaatcaagggtacaaggtatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagggccctcaggaaagaatgaatacagcctatactggcttgtcctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcgagataaccaggccactctatactctaatcaaggaaacccagagggcaaatactcatctagtagaatgggaaccagaggcataaacagctttcaaaaccttaaagcaggccctagttccagctccagccttaagccttcccacaggacaaaacttctctttatatatcacagagagagcaggaatagctcttggagtccttactcagactcatgggacaacctcacaaccagcggcacacctgagtaaggaaattgatgtagtagcaaaaggctggcctcattgtttatgggtagttgcagcagtggccatgttagtatcaaaggctatcaaaataatacaaggaaaggatcttactgtctggactattcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagataccagacactactccttgagggaccagtgctaaaaatacgcacatgtgtagccctcaaccctgccacttttctcccagaggatggggaaccaattgagcatgccagcc-aaaaaattgtagtccagacttatgccgcccaagaggatctcttagaggtccctttagctaatcctgaccttaacctatataccgatagaagttcatttatggagaatgggatatgaagggcaagttatgccatagttagtgatgtaacagtacttgaaactaagccttttcccccctgggaccagtgcccagttagtacaactagtggtgcttacccgagcctaagaactgggaaaggaaaaaagaata--------------------------------------------------------------aatgtatacacagatag-caagtatgcttatctaattctacatgcctatgctgcaatatggaaagaaatggagttcctaacctctgggggaactcccattaaataccacaaggaaaccatggagttattgcacgccgtgcaaaaacccaaggaggtggcagtcttacactgctgaggccatcaaaaaagtgaaggaaaaaaggcagaaggaaactatcaggcagaagctgaggccaaaattgctgccaggtggaacctcccattagaaatacctatggaacgaccctcggtaaggaacaaccctctccaagaaattaagccccagtatctcctgaccaaaacagaatggggactttcatgggggcatagttttctcccctcggggtggttaatgacagaag-gggaaaagtacttataccgga----agcagaccagtggaaaatacataagaccttccactaacccttttatatgggtattgagaacattcatcaaatggccaaatctctatttacagggccaaatctcctctggaccatccagcaagtagtcaaagcatgtgaggtgtgccaaaggaataatcccttggtccatcgtaaggcccctctggggg-aacaaagaataggtcactatcctggagaggactggcagtcagacttcacccatatgcctaagtcaaggggatttcaatacttgttggtctgtgttaatacctttacaaattggatagacaccttcccttgcaagaaagagaaggctcaataagtggttaaagtcctaattcatgaaataattcctagatttgggctccctcaaagcttacaaaatggcaatggtccaacttgtaaagccacgataactcagggaatttctagggcgctagggatacagtatcaccttcactgcacctgaaggccacaatcctcagggaaggttgaaaaagcaaata-aaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatgggctactctcttgcccatgaccttgttgagaatccaaaattctcctcacaaaatggggttcggtccatatgaaatgctgcatggatgatcttttctcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttcttcagcaaaataacaacaaaaccttaaaaacctacctgaaggatgtcacagagaaaagcgaacagagttgttccaactgggagatctagcgttcgtcaagtcccttccctctacctcccaaactatggattccttgtgggaaggaccatactcagtaaccctctctacccgcactgcagttaaggtggcaggaggggaatcttggattcgccacaccgaagttcaactttggacaccccctgaggaacctgcaggaccgtcaggtcaggagtcccaagatcatccagaccagccttgatacacctgtgaaccactggaagccttg i manLeu1.NW_012102865v1 C 0 C 0 s colAng1.NW_012120598v1 271534 2942 - 13750039 gcttagtaagaaaattcagcagtccctgcaacaccccaattctaggagtacaaaagcaaaatggtcagtagagactagtgcaagatcttagactcatcaatgaggcagtaattcctctatatccagctatagccaaccgctataccctgctctctcaaataccagaggaagcagaatggtttactgttctggacctcaaggatgccttctgccttctcctccactctgactcccagtttctctttgcctttgaggatcccacagaccacatgtcccaacttagatggaccgtcttgcctcaaggttttagggatagccctcatctgtatggtcaggcactggctcaaaatctaggccacttctcaagttcagacactctggtccttcagtgtgtggatgatttacttttggctaccaatttggaagcctcatgccagcaggctactctagatctcttgaactttctagctaatcaagggtacaagggatgtaaatcaaaggcccagctctgcctacagcaagtcaaatatctagacctagtcttagccagaggaaccagggccctcagcaaagaatgaatacagcctatactggcttgttctcaccctaagacattaaaacagttgcaggagttccttgggatcaccagcctttgccaactatggatccccagatacagcaagatgaccaggccactctaaactctaatcaaggaaacccagagggcaaatactcatctaggagaatgggaaccagaggcataaaaagctttcaaaaccttaaagcaggcgctagttccaggtccagccttaagccttcccacaggacaaaacttctctttatatatcacagagagagcaggaatagctcttggagtccttactcggactcatgggacaacctcacagccagcggcatacctaagtaaggaaattgatgcagtagcaaaaggctggcctcattgtttatgagtagttgcagcagtggccattttagtatcagaggctatcaaaataatacaaggaaaggatctcactgtctggactactcatgatgtaaatggcatattaggtgccaaatgaagtttatggctatcagacaaccacctgctcagataccagatgttactacttgagggaccggtgctaaaaatatgcacatgtgtagccctcaaccctgccacttttctcccagaggatggggaatcaattgagcatgactgccaaaaaaattgtagtccagacttatgccgcccaacaggatctcttagaggtccccttagctaatcctgaccttaacctatataccgatagaagttcatttatggagaatt---tatgaagggcaagttatgccacagttagtgatgtaatagtacttgaaactaagactcttccccccagggaccagtgcccagttagcagaactagtggtgcttacccgagcctaagaactgggaaaggaaaaaagaata--------------------------------------------------------------aatgtatacacagatag-caagtatgcttatctaattctacatgcccatgctgcaatatggaaagaaagggagttcctaacctctgggggaacgcccattaaataccacaaggaaaccatggagttattgcacgccgtgcaaaaacccaaggagctggcagtcttacactgctgaagccatcaaaaaggtggaggagaaaaggcagaaggaaactgtcaggcagaagctgaggccaaaattgctgccaggtggaacctcccattagaaatacctacggaacgaccctcggtatggaacaaccctctccaagaaattaagccccagtatctcctgaccaaaacagaatggggactttgatgggggcatagttttctcccctcggggtcgttaatgacagaag-ggaaaaagtacttataccaga----agccgaccagtggaaaatacataagaccctccactaacccttttacatgggtattgagaacattcatcaaatggccaaatccctatttacagggccaaatctcctctggatcatccggcaagtagtcaaagcatgtgaggtgtgccaaaggaataatcctttggtccactgtaaagcccctctagggg-aacaaagaataggccactgtcctggagaggactggcagtcagacttcacccatatgcctaagtcaaggggatttcaatacttgttggtctgtattaatacctttacaaattggatagaagccttcccttgcaagaaagagaaggctcaggaag----caaagtcctaattcatgaaataattgctagacttgggcttccccaaagcttacaaaatggcaatggtccaacttttaaaggcacgataacccagggaatttccagggcgctagggatacagtatcaccttcactgtgcctgaaggccacaatcctcagggaaggtggagaaagcaaatg-aaacactcaagaggcacttaaggaaactaacacaagaaactcatcacccatggcctactctcttgcccatgatcttgttgagaatccaaaattctcctcacaaaatgaggttcagttcataagaaatgctgtatggatgatcttttttcacagatgacctcctacttgatcaggaaatggccaacttggtcaaagatgtaacttctttggcaaaataacaacaaaaccttaaaaacctacctgaaggatgtcacagagaaaagcgaacagagttgttccaactaggagatctagtgttggtcaagtcccttccctctacctcccaaactatggattccttgtgggaaggaccatgctcagtaatcctctctacccacactgcagttaaggtggcaagaggggaatcttggattcgccacacccaagttcaactttggacaccccctgaggagcctgcaggatcgtcaggtcaggagtcccaagatcagccagaccagccttgatacacctgtgaaccactggaggacttg i colAng1.NW_012120598v1 C 0 C 0 a score=6895.000000 s hg38.chr21_KI270874v1_alt 159808 2 + 166743 cg s panTro5.chr21 3784577 2 + 33445071 tg i panTro5.chr21 C 0 C 0 s panPan2.chr21 17409954 2 + 46275980 cg i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3348799 2 - 13858734 tg i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4529034 2 + 32716333 cg i nomLeu3.chr25 C 0 C 0 s rheMac8.chr3 155481915 2 - 185818997 cg i rheMac8.chr3 C 0 N 0 s macFas5.chr3 162306093 2 - 192294377 cg i macFas5.chr3 C 0 N 0 s macNem1.NW_012019910v1 8786881 2 + 9440265 cg i macNem1.NW_012019910v1 C 0 N 0 s manLeu1.NW_012102865v1 2275636 2 + 4234846 cg i manLeu1.NW_012102865v1 C 0 N 0 s colAng1.NW_012120598v1 274476 2 - 13750039 cg i colAng1.NW_012120598v1 C 0 N 0 a score=1679010.000000 s hg38.chr21_KI270874v1_alt 159810 1900 + 166743 tctcctatttcagaaggaaacatcccaaactaaaaaggctccttcagctgatcctgaggaaaaaccccttcctacttaaaaaagttaagtgaaaacctacataatctttaacacctctccttgcccctttaatggaatccttttactgtttcatcacattattaggcagtatactaaacatactctttgcagtaggattatatactgtagcttctgccgggatgaaaatcctaatcacatcaaccttttttctatcatccttcgttctgatggcaatttaatcctacctttaactcagactggataaaaagacctcatcttccagggaaccctctttacctttctacttacactttgtctatataaccctcctgcttccttggataccccacatagtcacccctccccttccactggctcctaattacctctacaagactctcaacttaacccactctctgttaaaccagtccaatcc--ttccctggcaaatgactgtcggctttgtatctctctatcagccactgcttatgttgccactctcgttcccac--aaaaaactgggtctttattaacttaacctaccactcccattatgaaggaagagaccctttccaacttctaaatatgcaatcattagctgacttccccatctctgataggaacaaa---------gcagggcacacaatccagcgtttacactcttacatttccaacctcacctattgctcctcacaggagcagtgaaaagcacatacacagccctgtaaccaggaataccatctaattttccaagcccctttatgcatccaactcaacctgttatcaggcctgcccctggggcacctattatcccatcagtgtaattacaccctacaacttcaagccccaactgatcatagtaacttccgagtcacccaaacagctccattcagatggcttttctgcttctcaggatccccaaaaatcatcaccttctccctgcttaacaaacagtctgggttttgtaatggcaaacacattccctgcatgaccattctcctctggaccccctgcagcagtgtccccaacactagcaaatgccttctcatcccctctttcaattactctcttgaatggttcctagtagatacaaaatgattttatctccagtgggaaaatggaacacagggagccactcagtttcctcccaacacccatttccagccgctcaccaaagctaccttcgcgagtactctaagagtatgggaaaatgaaaacaacaaattcacacacctttttaacatacacaaccagttctgtctacccagccaaggcatattcttcttatatggaacttcaacctatatctatctgcctccccaccaaacggacaggcacctgcaccttagtcttcctaagtcccaccattgacatcgccccaggaaatcagaccctatcagtgcccctcaaggctcaagaccatcagtgcagggccataaaactaatacccctacttatagggttaggaatggcccctgctacaggaaccagaatagccagtttatctacttcactatcctattaccacgcactctcaaaggatttctctgacagtgtgcaagaaataatgaaatctatcctcactctacagtcccaaatagaccctttggcaacagtgactctccaaaactgccgaggcctagacctcctcactgctgagaaaggaggactttgcaccttcttaggggaaaagtgttgtttttacactaacaattcagggatagtatgagacgccacctggcatttgcaggaaaagtcttctgaaatcagacaacacctttcaaacttttataccaacctctggagttgggcaacatggcttctcccctttctaggtcctgtgagagccatcttgctattacttgcct s panTro5.chr21 3784579 1900 + 33445071 tctcctatttcagaaggaaacatcccaaactaaaaaggctccttcagctgatcctgaggaaaaaccccttcctacttaaaaaagataagtgaaaacctacataatctttaacacctctccttgcccctttaatggaatccttttactgtttcatcacattattaagcagtatactaaacatactctttgcagtaggattatatactgtagcttctgccgggatgaaaatcctaatcacatcaaccttttttctatcatccttcgttctgatggcaatttaatcctacctttaactcagactggataaaatgacctcatcttccagggcaccctctttacctttctacttacactttgcctatataaccctcctgcttccttggataccccacatagtcacccctccccttccactggctcctaattacctctacaagactctcaacttaacccagtctctgttaaaccagtccaatcc--ttccctggcaaacgactgttggctttgtatctctctatcggccactgcttatgttgccactctcgttcccac--aaaaaactgggtctttattaacttaacctaccactcccattatgaaagaagagaccctttccaacttctaaatatgcaatcattagctgacttccccatctctgataggaacaaa---------acagggcacacaatccagcgtttacactcttacatttccaacctcacctattgctcctcacaggagcagtgaaaagcacatacacagccctgtaaccaggaataccgtctaactttccaagcccctttatgcatccaactcaacctgttatcaggcctgcccctggggcacctattatcccatcagtgtaattacaccctacaacttcaagccccaactgatcatagtaacttccgagtcacccaaacagctccattcagatggcttttctgcttctcaggatccccaaaaatcatcaccttctccctgcttaacaaacagtctgggttttgtaatggcaaacacattccctgcatgaccattctcctctggaccccctgcagcagtgtccccaacactagcaaatgccttctcatcccctctttcaattactctcttgaatggttcctagtagatacaaaatggttttatctccagtgggaaaatggaacacagggagccactcagtttcctcccaacacccatttccagccgctcaccaaagctaccttcgcgagtactctaagagtatgggaaaatgaaaacaacaaattcacacacctttttaacatacacaaccagttctgtctacccagccaaggcatattcttcttatatggaacttcaacctatatctatctgcctccccaccaaatggacaggcacctgcaccttagtcttcctaagtcccaccattgacatcgccccaggaaatcagaccctatcagtgcccctcaaggctcgagaccatcagcgcagggccataaaactaatacccctacttatagggttaggaatggcccctgctacaggaaccagaatagccagtttatctacttcactatcctattaccacacactctcgaaggatttctctgacagtgtgcaagaaataatgaaatctatcctcactctacagtcccaaatagactctttggcaacagtgactctccaaaactgccgaggcctagacctcctcactgctgagaaaggaggactttgcaccttcttaggggaaaagtgttgtttttacactaacaattcagggatagtatgagacgccacctggcatttgcaggaaaagtcttctgaaatcagacaacacctttcaaactcttataccaacctctggagttgggcaacatggcttctcccctttctaggtcctgtgagagccaccttgctattacttgcct i panTro5.chr21 C 0 C 0 s panPan2.chr21 17409956 1909 + 46275980 tctcctatttcagaaggaaacatcccaaactaaaaaggctccttcagctgatcctgaggaaaaaccccttcctacttaaaaaagataagtgaaaacctacataatcttcaacacctctccttgcccctttaatggaatccttttactgtttcatcacattattaagcagtatactaaacatactctttgcagtaggattatatactgtagcttctgccgggatgaaaatcctaatcacatcaaccttttttctatcatccttcattctgatggcaatttaatcctacctttaactcagactggataaaatgacctcatcttccagggcaccctctttacctttctacttacactttgcctatataaccctcctgcttccttggataccccacatagtcacccctccccttccactggctcctaattacctctacaagactctcaacttaacccactctctgttaaaccagtccaatcc--ttccctggcaaatgactgttggctttgtatctctctatcagccactgcttatgttgccactctcgttcccac--aaaaaactgggtatttattaacttaacctaccactcccattatgaaggaagagaccctttccaacttctaaatatgcaatcattagctgacttccccatctctgataggagcaaaaataccctgacagggcacacaatccagcgtttatgctcttacatttccaacctcacctattgctcctcacaggagcagtgaaaagcacatacacagccctgtaaccaggaataccatctaactttccaagcccctttatgcatccaactcaacctgttatcaggcctgcccctggggcacctattatcccatcagtgtaattacaccctacaacttcaagccccaactgatcatagtaacttccaagtcacccaaacagctccattcagatggcttgtctgcttctcaggatccccaaaaatcatcaccttctccctgcttaacaaacagtctgggttttgtaatggcaaacacattccctgcatgaccattctcctctggacccccagcagcagtgtccccaacactagcaaatgccttctcatcccttctttcaattactctcttgaatggttcctagtagatacaaaatggttttatctccagtgggaaaatggaacacagggagccactcagtttcctcccaacacccatttccagccgctcaccaaagctaccttcgcgagtactctaagagtatgggaaaatgaaaacaacaaattcacacacctttttaacatacacaaccagttctgtctacccagccaaggcatattcttcttatatggaacttcaacctatatctatctgcctccccaccaaatggacaggcacctgtaccttagtcttcctaagtcccaccattgacatcgccccaggaaatcagaccctatcagtgcccctcaaggctcaagaccatcagcgcagggccataaaactaatacccctacttatagggttaggaatggcccctgctacaggaaccagaatagccagtttatctacttcactatcctattaccacgcactctcaaaggatttctctgacagtgtgcaagaaataatgaaatctatcctcgctctacagtcccaaatagactctttggcaacagtgactctccaaaactgccgaggcctagacctcctcactgctgagaaaggaggactttgcaccttcttaggggaaaagtgttgtttttacactaacaattcagggatagtatgagacgccacctggcatttgcaggaaaagtcttctgaaatcagacaacacctttcaaactcttataccaacacctggagttgggcaacatggcttctcccctttctaggtcctgtgagagccatcttgctattacttgcct i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3348801 1890 - 13858734 tctcctatttcagaaggaaacatcccaaactaaaaaggctccttcagctgatcctgaggaaaaaccctttcctacttaaaaaagataagtgaaaacctacataatctttaacacctctcctt-cccctttaatggaatccttttactgtttcatcacattattaagcagtatactaaacatactctttgcagtaggattatatactgtagcttctgccgggatgaaaatcctaatcacatcaaccttttttctatcatccttcgttctgatggcaatttaatcctacctttaactcagactggataaaatgacctcatcttccagggcaccctctttacctttctacttactctttgcctatataaccctcctgcttccttggataccccacatagtcacccctccccttccactggctcctaattacctctacaagactctc-----aacccattctctgttaaaccagtccaatcc--ttccctggcaaacgactgttggctttgtatctctctatcagccactgcttatgttgccactctcgttcccac--aaaaaactgggtctttattaacttaacctaccacccccattatgaaggaagagaccctttccaacttctaaatatgcaaccattagctgacttccccatctctgataggaacaaa---------acagggcacacaatccagcgtttacactcttacatttccaacctcaccaattgctcctcacaggagcagtgaaaagcacatacacagccctgtaaccaggaatactgtctaactttccaagcccctttgtgcatccaagtcaacctgttatcaggcctgcccctggggcacctattatcccatcagtgtaattacaccc-acaaattcaagccccaactgatcatagtaacttccgagtcacccaaacagctccattcagatggcttgtctgcttctcaagatcccc-aaaatcatcaccttctccctgcttaataaacagtctggattttgtaatggcaaacacattccctgcatgaccattctcctctggaccccctgcagcagtgtccccaacactagcaaatgccttctcatcccctctttcaactactctcttgaatggttcctagtagatacaaaatggttttatctccagtgggaaaatagaacaca-ggagccactcagtttcctcccaacacccatttccagccgctcaccaaagctaccttcgcgagtactgtaagagtatgggaaaatgaaaacaacaaattcacacacctttttaacatacacaaccagttctgtctacccagccaaagcatattcttcttatatggaacttcaacctatatctatctgcctccccaccaaatggacaggcacctgcaccttagtcttcctaagtcccaccattgacatcgccccaggaaatcagaccctatcagtgcccctcaatgctcaagaccatcagcgcagggccataaaactaatacccctacttatagggttaggaatggcccctgctacaggaaccagaatagccagtttatctacttcactatcctattaccatgcactctcaaaggatttctctgacagtgtgcaagaaataatgaaatctatcctcactctacagtcccaaatagactctttggcagcagtgactctccaaaactgccgaggcctagacctcctcactgctgagaaaggaggactttgcaccttcttaggggaaaagtgttgtttttaca-taacaattcagggatagtgtgagatgccacctggcatttgcaggaaaagtcttctgaaatcagacaacacctttcaaactcttataccaacctctggagttgggcaacatggcttctcccctttctaggtcctgtgagagccatcttgctattacttgcct i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4529036 1885 + 32716333 tctcctatttcagaaggaaacatcccaaactaaaaaggctcctacagctgatcctgaggaaaaaccccttcctacttaaaaaagataagtgaaaacctacataatctttaacacctctccttgcccctttaatggaatccttttactgtttcatcacattattaagcagtatactaaacctactctttgcagtaggattatatactgtagctcctgctgggatgaaaatcctaatcgcatcaaccttttttctatcatgcttctttctgacagcaatttaatcctacctttaactcagactggataaaatgatctcatcttccagggcaccctctttacctttctacttactctttgcctatataactctcctgcttccttggataccccacatagtcacccctccccttccactagctcttaattacctctacaagactctcaacttaacccactctctgttaaaccagtccaatccttttccctggcaatcaactgttggctttgtatctctctatcagccactgcttatgttgccattctcattcccgcaaaaaaaactgggtctttattaacttaacctaccacccccattatgaaggaagagaccctttccaacttctaaatatgcaatcattagctgacttccccatctctgataggaacaaaaataccctaacaggacacacaatccagcatttacgttcttacatttccaacctcacctatt-------acacaagcaatgaaaagcacatacacagccctgtaacc---------gcctaactttccaagcccctttatgcatccaatgcagcctgttatcaggcctggccctggggcacctattatcccatcagtgtaattacatcctacaacttcaagccccaactgatcatagtaacttccaagtcacccaaacagctccattcagatggcttgtctgcttctcaggatcccccaaaatcatcacttcctccctgctt----aacagtctgggttttgtaatggcaaacacactccctgcatgaccattctcctctggaccccctgcagcagtgcccccaccactagcaaatgccttctcatcccctctttcaatcactctcttgaatggttcctagtagatagaaaatggttttatctcttgcgggaaaatagaacacagggagccactccatttgctcccaacacccatttccaggcactcaccaaagctaccttggcgagtactctaggagtatgggaaaatgaaaacaacaaactcacacaactgtttaacatacacaaccagttctgtctccccagccaatgcatattcttcttatgtggaacttcaacctatatctatctgcctccccaccaaatggacaggcacctgcaccttagtcttcctaagtcccaccattgacattgccccaggaaatcagaccctatcagtgcccctcaaggctcaagaccatcagtgcagggccataaaactaataccactacttatagggttaggaatgg-ccctgctacaggaaccagaatagccagtttatctacttcactatcctattaccacacactctcaaaggatttctctgacagtgtgcaagaaataatgaaatctatcctcactctacagtcccaaatagactctttggcaggagtgactctccaaaaccgccaaggcctagacctcctcactgctgagaaaggagaactttgcaccttcttaggggaagag---tgtttttacactaacaagtca-ggatagtatgagatgccacccggcatttgcaggaaaaggcttttgaaatcag---acacctttcaaactcttataccaacctctggagttgggcaacatggcttctcccctatctaggtcctgtgagagccatcttgctattacttgcct i nomLeu3.chr25 C 0 C 0 a score=0.000000 s hg38.chr21_KI270874v1_alt 161710 784 + 166743 tcaggccctgtatttttatttttttattttttttttttaattttttttttttattatactctaagttttagggtacatgtgcacattgtgcaggttagttacatatgtatacatgtgccatgctggtgcgctgcacccactaacgtgtcatctagcattaggtatatctcccaatgctatccctcccccctcccccgaccccaccacagtccccagagtgtgatattccccttcctgtgtccatgtgatctcattgttcaattcccacctatgagtgagaatatgcggtgtttggttttttgttcttgcgatagtttactgagaatgatggtttccaatttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcgccacactgacttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaaccggtgtgagatgatatctcatagtggttttgatttgcatttctctga e nomLeu3.chr25 4530921 0 + 32716333 C e gorGor5.CYUI01015003v1 3350691 0 - 13858734 C e panPan2.chr21 17411865 0 + 46275980 C e panTro5.chr21 3786479 0 + 33445071 C a score=2378941.000000 s hg38.chr21_KI270874v1_alt 162494 2701 + 166743 tcaggccctgtatttttaacatccttgccaaatttgtttcctctaggattgaagtcatcaagctacaggtggtcttacaaatggaaccccaaatgagctcaactcacaacttctaacgaggacaactggattgacccactggccctttgactggcctagagagttcccctctggaggacactaaaactgcagggccccttcttcacccctatccagcagttagtagctagaatggtcattgcccagttcccaagagcagctgtggtgtcctgtttaga-gggCTATtgagaggtgaggccagctgaacttcctgggtcaagtggggacttggggaactttcctgtcttacaagaggattgtaaaatgcaccaatcagtgctctgtaaaacacactaatcagctctctgtaaaacacatcaatcagcactctgtaaaacacaccaatcagcactctgtaaaacgcaccaataagcactctgtaaaatgcaccaatcagcaggatcctaaaggtagccacctttcactcttcacaataaaccttgctaccactcactctttgggtccttgccatctttaagagctgtaacactcaccgtgaaggtccacggcttcattcttgaagtcagcaagactgtgaacccactggcaggaaccaactctggacacaCAAGGACTGCGAGCACAGTCAGCACTTTGGCAGAGAAAGGTCACCTGGATGTTACATGGCGAGGCTACAGGGTTGTAAGGGTCACTTTACCTTCAGCTCTGCACTGAGGCTGGCTAGTCCTTGAGAAACTAAGTGACCTGCTTCTCAGCTGTGCAAGTAAAAAATCTTGGCAACACATCATCCAAACCATGGCTCAGCTGCTGCAGGGCCCCACAGAATAGGGCCCTGCCTTTCCTTCCCATCAGCATCCCATCTGACCCTGTCTGAGTCCCATGATGGCTGGCTGGGTGTGGGCAGCATGTACACGGGAGATCATGGGTGCTTGAAAGAAGTCGAGGCTGTACCTTTCTTTGCAAGAACCTGTTCTCTTTCCCTCCTTGTTTTTAAAAATATTCAATACAGTATAATTTTATAATGATAACAGAACCTGGTCCGACTTCTGTGGAAAAGGATTGATCAACAAGCCTGAGTTGGGGGTTTTTCTGTTCAGTTCGTATTAGGGCCCCTCTAGGGGAGTTTTCTGTGTTGTTTAGGAAGGGCTTCTTTCATAAAGAAGTAggcccagtgtggtggcttgcacctgtaatcccaacattttgggaggccgaggcaggaggattgcttgagcccaggagttcgagaccagcctggccaccatagtgagactttgttctctaccaaaaatttaaaaattagctgggcatagtggcgcatgcctgtagttccagctacttgtga-ggctgaggtgggagaatcgcttgagcctgggaggtcgaggctgcagtgagctatgactgcaacactgcacacagcctgggctacagaacaagacactgtctcacaaaaagaaaaaaCAAGCAACTTATTCATTTTTTGTGTTGAATGTGACCCACGTGCATCTTAAAAGAAAATAAAATTCCTGTATCCAAGCT---AAAAAAaaaaattatatgaaatcgaaaaagaacccaaatagccaatacattcctaagcaaaaagaacaaagctggagctatcacattactaacttcagactatactacaaggctactgtaaccaaaacagcatagtactggtacaaaaacacatagaccaatgaaacaggatatagagcccagaaataatgtgacacacctgccaaaatctgatcattgacaaaattgacaaaaacaaacaatggggaatagtctctctattcaataaatggtgctgggataactggctagccatatgaagaagattgaaactgggtgccttccttacactatatataaaaattcacttcagatgtattaaagacttaattctaaaaccaaaaactatagaaaccctggaaaacaacctaggcaataccattctggatataatacctggcaaaaacctcatgacaaagacacagaaaaaaattgc---------------------------------------aaaaaaaaaaaaaacaaaaaaaaacaaaaaaaaaaaCTGGGGTtggctggctagatggccgaataggaacagctctggtctacagctcccagtgagatcaaagcagaaggtgggtgatttctgcatttccaactgaggtacatggctcatctcattaggactggttagacagtggatgcagccaatggagggtgagccgaaggagggtgggtcgtcacctcacctgggaagtgcaaggggtcgaggaactccctcccctagccaagggaagccatgagggactgtgccatgaggaagggtgaattttggctcagatactatgcttttcccacagtcttcaccacccacagaccaggagattccctcgggtgcctacacca-ccagggccctggatttgaagcacaaaactgggtggccatttgggcagacaccgagttagctgca---------------gttttgttttgttttgttttgttttgttcatacccaggtggtgcctggaattccagatagacagaacagttcattctgatggaaagggggctgaagccagggagccaagtggtctagtttagcagatcccacccacatggagcccagcaagctaagatccactggcttaaaattcttgctgcc s panTro5.chr21 3786479 2759 + 33445071 tcaggccctgtatttttaacatccttgccaaatttgtttcctctaggattgaggccatcaagctacaggtggtcttacaaatggaaccccaaatgagctcaactcacaacttctaacgaggaccactggattgacccattggccctttgactggcctagagagttcccctctggaggacactaaaactgcagggccccttcttcacccctatccagcagttagtagctagaatggtcattgcccagttcccaagagcagctggggtgtcctgtttaga-gggCTATtgagaggtgaggccagctgaacttcctgggtcaagtggggacttggggaactttcctgtcttacaagaggattgtaaaatgcaccaatcagtgctctgtaaaacacactaatcagctctctgtaaaacacatcaatcagcactctgtaaaacacaccaatcagcactctgtaaaacgcaccaataagcactctgtaaaatgcaccaatcagcaggatcctaaaggtagccaccttttgctcttcacaataaaccttgctaccactcactctttgggtccttgccatctttaagagctgtaacactcaccgtgaaggtccacggcttcattcttgaagtcagcaagactgtgaacccactggcaggaaccaactctggacacaCAAGGACTGCGAGCACAGTCAGCACTTTGGCAGAGAAAGGTCACCTGGATGTTACATGGTGAGGCTACAGGGTTGTAAGGGTCACTTTACCTTCAGCTCTGCACTGAGGCTGGCTAGTCCTTGAGAAACTAAGTGACCTGCTTCTCAGCTGTGCAAATAAAAAATCTTGGCAACACATCATCCAAACCATGGCTCAGCTGCTGCAGGGCCCCACAGAATAGGGCCCTGCCTTTCCTTCCCATCAGCATCCCATCTGACCCTGTCTGAGTCCCATGATGGCTGGCTGGGTGTGGGCAGCATGTACACGGGAGATCGTGGGTGCTTGAAAGAAGTCGAGGCTGTACCTTTCTTTGCAAGAACCTGTTCTCTTTCCCTCCTTGCCTTTAAAAATATTCAATAGAGTATAATTTTATAATGATAACAGAACCTGGTCCAACTTCTGTGGAAAAGGATTGATCAACAAGCCTGAGTTGGGGATTTTTCTGTTCAGTTCTCATTAGGGCCCCTCTAGGGGAGTTTTCTGTGTTGTTTAGGAAGGGCTTCTTTCATAAAGAAGTAggcccagtgtggtggcttgcacctgtaatcccaacattttgggaggccgaggcaggaggattgcttgagcccaggagttcgagaccagcctggccaccatagtgagactttgttctctaccaaaaatttaaaaattagctgggcatagtggcgcatgcctgtagttccagctacttgtgagggcttaggtgggagaatcgcttgagcctgggaggtcgaggctgcagtgagctatgactgcaacactgcacacagcctgggctacagaacaagacactgtctcataaaaagaaaaaaCAAGCAACTTATTCATTTTTTCTGTTGAATGTGACCCACGTGCATCTTAAAAGAAAATAAAATTCCTGTATCCAAGctaaaaaaaaaaaaaattatatgaaatcgaaaaagaacccaaatagccaatacattcctaagcaaaaagaacaaagctggagctatcacattactaacttcagactatactacaaggctattgtaaccaaaacagcatagtactggtacaaaaacacatagaccaatgaaacaggatatagagcccagaaataatgtgacacacctgccaaaatctgatcattgacaaaattgacaaaaacaaacaatggggaatagtctctatattcaataaatggtgctgggataactggctagccatatgaagaagattgaaactgggtgccttccttacactatatataaaaattcacttcagatgtattaaagacttaattctaaaaccaaaaactatagaaaccctggaaaacaacctaggcaataccattctggatataacacctggcaaaaacctcatgacaaagacacagaaaacaattgcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCTGGGGTtggctggctagatggccgaataggaacagctctggtctacagctcccagtgagatcaaagcagaaggtgggtgatttgtgcatttccgactgaggtacatggctcatctcattaggactggttagacagtggatgcagccaatggagggtgagccgaaggagggtgggtcgtcacctcacctgggaagtgcaaggggtcaaggaactccctcccctagccaagggaagccatgagggactgtgccatgaggaagggtgaattttggctcagatactatgcttttcccacagtcttcaccacccacagaccaggagatgccctcgggtgcctacacca-ccagggccctagatttcaagcacaaaactgggtggccatttgggcagacactgagttagctgcagttttgttttgttttgttttgttttgttttgttttgttttgttcatacccaggtggcgcctggaattccagatagacagaacagttcattctgatggaaagggggctgaagccagggagccaagtggtctagtttagcagatctcacccacatggagcccagcaagctaagatccactggcttaaaattcttgctgcc i panTro5.chr21 C 0 C 0 s panPan2.chr21 17411865 2684 + 46275980 tcaggccctgtatttttaacatccttgccaaatttgtttcctctaggattgaggccatcaagctacaggtggtcttacaaatggaaccccaaatgagctcaactcacaacttctaacgagaaccactggattgacccactggccctttgactggcctagagagttcccctctggaggacactaaaactgcagggccccttcttcagccctatccagcagttagtagctagaatggtcattgcccagttcccaagagcagctggggtgtcctgtttaga-gggCTATtgagaggtgaggccagctgaacttcctgggtcaagtggggacttggagaactttcctgtcttacaagaggaatgtaaaatgcaccaatcagtgctctgtaaaacacactaatcagctctctgtaaaacacatcaatcagcgctctgtaaaacacaccaatcagcactctgtaaaacgcaccaataagcactctgtaaaatgcaccaatcagcaggatcctaaacgtagccacctttcgctcttcacaataaaccttgctaccactcactctttgggtccttgccatctttaagagctgtaacactcaccgtgaaggtccacagcttcattcttgaagtcagcaagaccgtgaacccactggcaggaaccaactctggacacaCAAGGACTGCGAGCACAGTCAGCACTTTGGCAGAGACAGGTCACCTGGATGTTACATGGTGAGGCTACAGGGTTGTAAGGGTCACTTTACCTTCAGCTCTGCACTGAGGCTGGCTAGTCCTTGAGAAACTAAGTGACCTGCTTCTCAGCTGTGCAAGTAAAAAATCTTGGCAACACATCATCCAAACCATGGCTCAGCTGCTGCAGGGCCCCACAGAATAGGGCCCTGCCTTTCCTTCCCATCAGCATCCCATCTGACCCTGTCTGAGTCCCATGATGGCTGGCTGGGTGTGGGCAGCGTGTACACGGGAGATCGTGGGTGCTTGAAAGAAGTCGAGGCTGTACCTTTCTTTGCAAGAACCTGTTCTCTTTCCCTCCTTGTCTTTAAAAATATTCAATACAGTATAATTTTATAATGATAACAGAACCTGGTCCAACTTCTGTGGAAAAGGATTGATCAACAAGCCTGAGTTGGGGGTTTTTCTGTTCAGTTCTCATTAGGGCCCCTCTAGGGGAGTTTTCTGTGTTGTTTAGGAAGGGCTTCTTTCATAAAGAAGTAggcccagtgtggtggtttgcacctgtaatcccaacattttgggaggccgaggcaggaggattgcttgagcccaggagttcgagaccagcctggccaccatagtgagactttcctctctaccaaaaatttaaaaattagctgggcatagtggcgcatgcctgtagttccagctacttgtga-ggctgaggtgggagaatcgcttgagcctgggaggttgaggctgcagtgagctatgactgcaacactgcacacagcctgggctacagaacaagacactgtctcacaaaaagaaaaaaCAAGCACCTTATTCATTTTTTCTGTTGAATGTAACCCACGTGCATCTTAAAAGAAAATAAAATTCCTGTATGCAAGCT----AAAAAaaaaattatatgaaatcgaaaaagaacccaaatagccaatacattcctaagcaaaaagaacaaagctggagatatcacattactaacttcagactatactacaaggctactgtaaccaaaacagcatagtactggtacaaaaacacatagaccaatgaaacaggatatagagcccagaaataatgtgacacacctgccaaaatctgatcattgacaaaactgacaaaaacaaacaatggggaatagtctctctattcaataaatggtgctgggataactggctagccatatgaagaagattgaaactgggtgccttccttacaccatatataaaaattcacttcagatgtattaaagacttaaatctaaaaccaaaaactatagaaaccctggaaaacaacctaggcaataccattctggatataatacctggcaaaaacctcatgacaaagacacagaaaacaattac---------------------------------------caaaaaaaaaaaaatA----------------------GGGGTtggctggctagatggctgaataggaatagctctggtctacagctcccagtgagatcaaagcagaaggtgggtgatttctgcatttccaactgaggtgcatggctcatctcattaggactggttagacagtggatgcagccaatggagggtaagccgaaggagggtgggtcatcacctcacctgggaagtgcaaggggtcaaggaactccctcccctagccaagggaagccatgagggactgtgccatgaggaagggtgaattttggctcagatactatgcttttcccacagtcttcaccacccgcagaccaggagattccctcgggtgcctacacca-ccagggccatggatttcaagcacaaaactgggtggccatttgggcagacaccgagttagctgca-----gttttgttttgttttgttttgttttgttttgttttgttcacacccaggtggcgcctggaatcccagat----agaacagttcattctgatggaaagggggctgaagccagggagccaagtggtctagtttagcagatcccacccacatggagcccagcaagctaagacccactggcttaaaattcttgctccc i panPan2.chr21 C 0 C 0 s gorGor5.CYUI01015003v1 3350691 2674 - 13858734 tcaggccctgtatttttaacatccttgccaaatttgtttcctctaggattgaggccatcaagctacaggtggtcttacaaatggaaccccaaatgagctcaactcacaacttctaacgaggaccactggattgacccgctggccctttgactggcctagagagttcccctccggaggacactaaaactgcagggccccttcttcacccctatccagcagttagtagctagaatggtcattgcccagttcccaagagcagctggggtgtcctgtttaga-gggCTATtgagaggtgaggccagctgaacttcctgggtcaagtggggacttggggaactttcctgccttacaa-aggattgtaaaatgcaccaatcagtgctctgtaaaacacactaattagctctctgtaaaacacatcaatcagcactctgtaaaacacaccaatcagcactctgtaaaacgcaccaataagcactctgtaaaatgcaccaatcagcaggatcctaaaggtagccacctttcgctcttcacaataaaccttgctaccactcactctttgggtccttgccatctttaagagctgtaacactcaccatgaaggtccacggcttcattcttgaagtcagcaagactgtgaacccactggcaggaaccaactctggacacaCAAGGACTG-GAGCACAGTCAGCCCTTTGGCAGAGAAAGGTCACCTGGATGTTACATGGTGAGGCTACAGGGTTGTAAGGGTCACTTTACCTTCAGCTCTGCACTGAGGCTGGCTAGTCCTTGAGAAACTAAGTGACCTGCTTCTCAGCTGTGCAAGTAAAAAATCTTGGCAACACATCATCCAAACCATGGCTCAGCTGCTGCAGGGCCCCACAGAATAGGGCCCTGCCTTTCCTTCCCATCAGCATCCCATCTGACCCTGTCTGAGTCCCATAATGGCTGGCTGGGTGTGGGCAGCATGTACACGGGAGATCGTGGGTGCTTGAAAGCAGTCGAGGCTGTACCTTTCTTTGCAAGAACCTGTTCTCTTTCCCTTCTTGTCTTTAAAAATATTCAATACAGTATAATTTTATAATGGTAACAGAACCTGGTCCAACTTCTGTGGAAAAGGATTGATCAACAAGCCTGAGTTGGGGGTTTTTCTGTTCAGTTCTCATTAGGGCCCCTCTAGGGGAGTTTTCTGTGTTGTTTAGGAAGGGCTTCTTTCATAAAGAAGTAggcccagtgtggtggcttgcacctgtaatcccaacattttgggaggccgaggcaggaggattgcttgagcccaggagttcaagaccagcctggccaccatagtgagactttgttctctaccaaaaatttaaaaattagctgggcatagtggtgcatgcctgtagttccagctacttgtga-ggctgaggtgggagaatcgcttgagcctgggaggtcgaggatgcagtgagctatgactgcaacactgcacacagcctgggctacagaacaagacactgtctcacaaaaagaaaaaaCAAGCAACTTATTCATTTTTTCTGTTGAATGTGACCCACGTGCATCTTAAAAGAAAATAAAATTCCTGTATCCAAGCT---AAAAAAaaaaattatatgaaatcgaaaaagaacccaaatagccaatatattcctaagcaaaaagaacaaagctggagatatcacattactaacttcagactatactaaaaggctactgtaaccaaaacagcatagtactggtacaaaaacacatagaccaatgaaacaggatatagagcccagaaataatgtgacacacctgccaaaatctgatcattgacaaaattgacaaaaacaaacaatggggaatagtctctctattcaataaatggtgctgggataactggctagccatatgaagaagattgaaactgggtgccttccttacaccatatataaaaattcacttcagatgtattaaagacttaaatctaaaaccaaaaactatagaaaccctggaaaacaacctaggcaataccattctggatataatacctggcaaaaacctcatgacaaagacacagaaaacaattgc---------------------------------------aaaaaaaaaaaaaaaa----------aaaaaaaaaaCTGGGGTtggctggctagatggc-gaataggaa-agctctggtctacagctcccagtgagatcaaagcagaaggtgggtgatttctgcatttccaactgaggtacatggctcatctcattagg--------gacagtggatgcagccaatggagggtgagccgaaggagggtgggtcgtcacctcacctgggaagtgcaaggggtcaaggaactccctcccctagccaagggaagccatgagggactgtgccatgaggaagggtgaattttggctcagatactacgcttttcccacagtcttcaccacccgcagaccaggagattccctcgggtgcctacacca-ccagggccctggatttcaagcacaaaactgggtggccatttgggcagacaccgagttagctgca--------------------gttttgttttgttttgttttgttcatacccaggtagcgcctggaattccagatagacagaacagttcattctgatggaaagggggctgaagccagggagccaagtggtctagtttagcagatcccacccacatggagcccagcaagctaagatccactggcttaaaattcttggtgcc i gorGor5.CYUI01015003v1 C 0 C 0 s nomLeu3.chr25 4530921 2655 + 32716333 tcaggccctgtatttttaacatccttgtcaaatttgtttcctctaggattgaggccatcaagctacagatggtcttacaaatggaaccccaaatgagctcaactcacaacttctaccaaggaccactggatttacccactggccctttgactggcctagagagttcccctctggaagacactacaactgcagggccccttcttcacccctatccagcagttagtagctagaatggtcattgcccagttcccaagagcagttggggtatcctgtttagaggggagattgagaggtgaggccagctgaacttcctggatcaagtggggacttggggaactttcctgtcttacaagaagattgtaaaatgcaccaatcagtgctctgtaaaacacactaatcagctctctgtaaaacacatcaatcagcactctgtaaaacgcaccaatcagcactctgtaaaatgcaccaataagcgctctgtaaaatgcaccaatcagcaggatcctaaaggtagccacgtttcgctcttcacaataaacattgctaccactcactctttggg----------------------------tcaccgtgaaggtccacggcttcattcttgaagtcagcaagaccgcaaacccactggcaggaaccaactctggacacaCAAGGACTGAGAGCACAGTCAGCACTTTGGCAGAGACAGGTCACCTGGATGTTACACGGTGAGGCTACAGGGCTGTAAGGGTCACTTGACCTTCGGCTCTGCACTAAAGCTGGCTGGTCCTTGAGAAACTAAGTGACCTGCTTCTCAGCTGTGCAAGTAAAAAATCTTTGCAACACATCATCCAAACCATGGCTCAGCTGCTGCAGGGCCCCACAGAATAGGGCCCTGCCTTTCCTTCCCATCGGCATCCCATCTGACCCTGTCTGAGTCCCATGATGGCTGGCTGGGTGTGGGCAGCATGTACACGGGAGATTGTGGGTGCTTGAAAGAAGTCGAGGCTGTACCTTTCTTTGCAAGAACCTGTTCTCTTTCCCTCCTTGTCTTTAAAAATATTCAATACAGTATAATTTTATAA---TAACAGAGCCTGGCCCAACTTCTGTGGAAAAGGATTGATCAACAAGCCTGAGTTGGGGGTTTTTCTGTTCCATTCTCATTAGGACCCCTCTAGGGGAGTTTTCTGCGTTGTTTAGGAAGGGCTTCTTTCATAAAGAAGTAggcccagtgtggtggcttgcacgtgtaatcccaacattttgggaggccgaggcaggaggattgcttgagcccaggagttcgagaccagcctggccaccatagtgagactttg-tctctaccaaaaatttaaaaattagctgggcatagtggcacatgcctgtagttccagctacttgtca-ggctgaggtgggagaatcacttgagcccgggaggtcaaggctgcagtgggctatgactgcaacactgcacactgcctgggctacagagcaagacactgtctcagaaaaagaaaaaaCAAGCAACTTATTCATCTTGTCTGTTGAATGTGACCCACGTGCATCTTAAAAGAAAATAAAATTCCTGTATCCAAGct--aaaaaaaaaaaattatatgaaatcaaaaaagaacccaaatagccaatacattcctaagcaaaaataacaaaggtggagatatcacattactaacttcagactatactacaaggctactgtaaccaaaacagcatagtactagtacaaaaacacatagaccaatgaaacagaatatagagcccagaaataatgtgacacacctgccaaaatctgatcattggcaaaattgacaaaaacaagcaatggggaatagtctctctattcaataaatggtactgggataactggctagccatatgaagaagattgaaactgggccccttccttacaccatatataaaaattcacttcagatgtattaaagacttaagtctaaaaccaaaaactatagaaaccctggaaaacaacctaggcaataccattctggacataatacctggcaaaaacctcatgacaaagacacagaaaacaattgc---------------------------------------aaaaaaaaaaaaaaaa-----------------aaactgggattggctggctagatggccaaataggaacagctctggtctacaactcccaaagagatcaaagcagaaggcgggtgattgctgcacttccaactgaggtacatggctcatctcattaggactggttagacagtggatgcagccaatggagggtgagccaaagcagggtggggcatcacctcacctgggaagtgcaagaggtcaaggaattccctcccctagccaagggaagccatgagggactgtgccatgaggaagggtgaattttggctcagatactac-----tcccacagtcttcaccacccacagaccaggagattccctcgggtgtctacaccacccagggccctggatttcaagcacaaaactgggtggccatttgggcagacaccgagttagctgca----------gttttgttttattttgttttgttttgttttgttcatacccaggtggcgcctggaattccagatagacagaacagttcattctgatggaaagggggctgaagccagggagccaagtggtctagtttagcagatcccacccacatggagcccagcaagctaaggtccactggcttaaaattcttgctgcc i nomLeu3.chr25 C 0 N 0 a score=853193.000000 s hg38.chr21_KI270874v1_alt 165195 1548 + 166743 agcacagcaatctgaatcaacttgggatgctcaaccttggtagcgaaaggggcatctgccattactgaggcttgagtaggcagttttcccctcacagtgtaaacaaacccactgggaagttcaaactgagcagagcccaccacagctcagcaaagctgctgtagccacattgcctctctagattcctcctccctgggcagggaatctctgaaagaaaggcagcagcctcagtcaggggattctagataaaattcccatctcccctgggacagagtacctgggggaagatgtggctgtggggacagctttagcagacttaaatgtttctgcctgccagctctgaaaagagtagcagatctcctagggcagcactcaagctctgctaagaaactgactggctcctgaagtaagtccctgatccccatggcttctgactgggagacacctcccagcaggagtcgacagacacctcatacaagagagctccagctggcatctcgtgggtgcccctctgggacaaagcttccagaggaaggaacaggcagcaatctttgctgttctgctgcctccgctggtgatacccgggcaaacagggtctggagtggacctccagcaaaatccagcagacctgcagcacagggaactgactgttagaaggaaaactaacaaatggaaaggaatagcatcaatatcaacaaaatggacgtccacacagaaaccccatccgaaaatcaccaacaccaaagaccaaaggtagataaatgcatgaagagaagaaaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcctccaaaggatcacaacaccttgcccacaaaggaacaaaactggacagagaatgagtttgacgaattgacagaagtgggtaataacacttcataagacttcataaggtgggtaataacaaactcctccgagctaaaggggcatgttctaacccaatgtaaggaggctaagaaccatgaaaaaaggttagaggaattgctaactagaataaccagtttagagaagaatataaattacctgatggagctgaaaaacacagcacaagaacttcatgaagcatacacaagtatcaataccaaattgatcaagcggaaggaaggatatcagagattgaagatcaacttagtgaaataaagcatgaagacaaaattagagaaaaaagaataaaaaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaacctatgtttgattggtctacatgaaagtgacatggagaatggaaccaagttggaaaactctcttcagaatattatccaggagaatttccccaatctagcaagacaggccaacattcaaattcaggaaatacagagaaaaccacaaacatattcctcgagaagagcaaccccaagaaacataatcatcagattcaccaaggttgaaatgaaggaaaaaatgttaagggcagccagagaaaaaggtcgggttaccctcaaagggaagcccatcagaccaacagc s panTro5.chr21 3789238 1548 + 33445071 agcacagcaatctgaatcaacctgggatgctcaaccttggtagggaaaggggcatctgccattactgaggcttgagtaggcagttttcccctcacagtgtaaacaaacccactgggaagttcaaactgagcagagcccaccacagctcagcaaagctgctgtagccacattgcctctctagattcctcctccctgggcagggaatctctgaaagaaaggcagcagcctcagtcaggggattctagataaaattcccatctcccctgggacagagtacctgggggaagaagtggctgtggggacagctttagcagacttaaatgtttctgcctgccagctctgaaaagagtagcagatctcccagggcagcactcaagctctgctaagaaactgactggctcctgaagtaagtccctgatccccatggcttctgactgggagacacctcccagcaggagtcgacagacacctcatacaagagagctccagctggcatctcgtgggtgcccctctgggacaaagcttccagaagaaggaacaggcagcaatctttgctgttctgctgcctccgctggtgatacccaggcaaacagggtctggagtggacctccagcaaaatccagcagacctgcagcacagggacctgactgttagaaggaaaactaacaaatggaaaggaatagcatcaatatcaacaaaatggatgtccacacagaaaccccatccgaaaatcaccaacatcaaagaccaaaggtagataaatccatgaagagaagaaaaaccagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcctccaaaggatcacaacaccttgcccacaaaggaacaaaactggacagagaatgagtttgatgaattgacagaagtgggtaataacacttcataagacttcataaggtgggtaataacaaactcctccgagctaaaggggcatgttctaacccaatgtaaggaggctaagaaccatgaaaaaaggttagaggaactgctaactagaataacgagtttagagaagaatataaatgacctgatggagctgaaaaacacagcacaagaacttcatgaagcatacacaagtatcaataccaaattgatcaagcagaaggaaggatatcagagattgaagatcaacttagtgaaataaagcatgaagacaaaattagagaaaaaagaataaaaaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaacctatgtttgattggtctacatgaaagtgacatggagaatggaaccaagttggaaaactctcttcagaatattatccaggagaatttccccaatctagcaagacaggccaacattcaaattcaggaaatacagagaaaaccacaaacatattcctcgagaagagcaaccccaagaaacataatcatcagattcaccaaggttgaaatgaaggaaaaaatgttaagggcagccagagaaaaaggtcgggttacccacaaagggaagcccatcagaccaacagc i panTro5.chr21 C 0 N 0 s panPan2.chr21 17414549 1548 + 46275980 agcacagcaatccgaatcaacctgggatgctcaaccttggtagggaaaggggcatctgccattactgaggcttgagtaggcagttttcccctcacagtgtaaacaaacccaccgggaagttcaaactgagcagagcccaccacagctcagcaaagctgctgtagccacattccctctctagattcctcctccctgggcagggaatctctgaaagaaaggcagcagcctcagtcaggggattctagataaaattcccatctcccctgggacagagtacctgggggaaggggtggctgtggggacagctttagcagacttaaatgtttctgcctaccagctctgaaaagagtagcagatctcccagggcagcactcaagctctgctaagaaactgactggctcctgaagtaagtccctgatccccatggcttctgactgggagacacctcccagcaggagtcgacagacacctcatacaagagagctccagctggcatctcgtgggtgcccctctgggacaaagcttccagaggaaggaacaggcagaaatctttgctgttctgctgcctccgctggtgatacccaggcaaacagggtctggagtggacctccagccaaatccagcagacctgcagcacagggacctgactgttagaaggaaaactaacaaatggaaaggaatagcatcaatatcaacaaaatggacgtccacacagaaaccccatccgaaaatcaccaacatcaaagaccaaaggtagataaatccatgaagagaagaaaaaccagcacaaaatggctgaaaattccaaaaaccagaatgcctcttctcctccaaaggatcacaacaccttgcccacaaaggaacaaaactggacagataatgagtttgacgaattgacagaagtgggtaataacacttcataagacttcataaggtgggtaataacaaactcctccaagctaaaggggcatgttctaacccaatgtaaggaggctaagaaccatgaaaaaaggttagaggaattgctaactagaataaccagtttagagaagaatataaatgacctgatggagctgaaaaacacagcacaagaacttcatgaagcatacacaagtatcaataccaaattgatgaagcggaaggaaggatatcagagattgaagatcaacttaatgaaataaagcatgaagacaaaattagagaaaaaagaataaaaaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaacctatgtttgattggtctacatgaaagtgacatggagaatggaaccaagttggaaaactctcttcagaatattatccaggagaatttccccaatctagcaagacaggccaacattcaaattcaggaaatacagagaaaaccacaaacatattcctcgagaagagcaaccccaagaaacataatcatcagattcaccaaggttgaaatgaaggaaaaaatgttaagggcagccagagaaaaaggtcgggttacccacaaagggaagcccatcagaccaacagc i panPan2.chr21 C 0 N 0 s gorGor5.CYUI01015003v1 3353365 1542 - 13858734 agcacagcaatccgaatcaacctgggatgctcagccttggtagggaaaggggcatctgccattactgaggcttgagtaggcagttttcccctcacagtgtaaacaaacccactgggaagttcaaactgagcagagcccaccacagctcagcaaagctgctgtagccacattccctctctagattcctcctccctgggcagggaatctctgaaagaaaggcagcagcctcagtca-gggattctagataaaattcccatctcccctgggacagagtacctgggggaaggggtggctgtggggacagctttagcagacttaaatgtttctgcctgccagctctgaaaagagtagcagatctcccagggcagcattcaagctctgctaagaaactgactggctcctgaagtaagtccctgatccccatggcttctgactgggagacacctcccagcaggagttgacagacacttcatacaagagagctccagctggcatctcgtgggtgcccctctgggacaaagcttccagaggaaggaacaggcagcaatctttgctgttctgctgcctccgctggtgatacccaggcaaacagggtctggagtggacctccagcaaaatccagcagacctgcagc-cagggacctgactgttagaaggaaaactaacaaatggaaaggaatagcatcaatatcaacaaaatggatgtccacacagaaaacccatccgaaaatcaccaacatcaaagaccaaaggtagataaatccatgaagagaagaaaaagcagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcctccaaaggatcaca--accttgcccacaaaggaacaaaactggacagagaatgagtttgacgaattgacagaagtgagtaataacacttcataagacttcataagatgggtaataacaaactcttccgagctaaaggggcatgttctaacccaatgtaaggaggctaagaaccatgaaaaaaggttagaggaattgct-actagaataaccagtttagagaagaatataaatgacctgatggagctgaaaaacacagcataagaacttcatgaagcatacacaagtgtcaataccaaattgatcaagcggaaggaatgatatcagagattgaagatcaacttagtgaaataaagcatgaagacaaaattagagaaaaaagaataaaaaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaacctatgtttgattggtctacatgaaagtgacatggagaatggaaccaagttggaaaactctcttcagaatattatccaggagaatttccccaatatagcaagacaggccaacattcaaattcaggaaatacagagaaaaccacagacatattcctcgagaagagcaacccc-agaaacataatcatcagattcaccaaggttgaaatgaaggaaaaaatgttaagggcagccagagaaaaaggtcgggttacccacaaagggaagcccatcagaccaacagc i gorGor5.CYUI01015003v1 C 0 N 0