##maf version=1 scoring=roast.v3.3 a score=355655.000000 s hg38.chr22_KI270732v1_random 0 1411 + 41543 TAGTGTCTTGTCGTCCGTTTTGGCTTTCTCCCTGATTCCAGAATGCAGGTAGAGATGTAGAGACATGCTCTCAGGACAGCTGTTGAGATAAAAAAAATTCGTTGTCATTTATTCCCAAGGACAGCTGTTTGTCATTTGCATTGAAAAAGTCTCCATTCAAACTGCTGTCACATATAAAATCTATTTATATGTCTGTATTTTTCTGTTGTCTTGGCCTTTGTGGGCAGTAGTGTGTTTTAACCGAGCAAACTGTCCTTCCAAATAATGTAGCCGAAGTCAGCCTTCAAAATAATGTT-GCCATTTTTCTTCGCCTTCCATTTTTCTAACCTCAGGATAATTGTAAGAATGaattaagatttgtgtttaaggccaggcacagtgtctcaggcctgtaatctcagcactttcggaggcggagacggatgtatcgcttgatctcaggagttgaagaccagcctgggcaacatactgagactccgtcttgtataattaaattaaaatttaaaAAAAGGAGAGAAAAGGACCTGTGTTTAAAATTTTA-AAAAAGGGGGGAAAGTGTAATGCAAAATGTGGACTATGCTAGCTATAATTGGGAAAAATAATTTTTCATACAGCATTATCTGTTGACTTGTATTAGCAGCACACTGGTCATAAGTGTTTTGCTTTCATCAAATATGA---GGTAAGCTACTTTAAAGTGTGGTGGGGCTTTCTTCCGCATGGCTCCTGGAGATGTTGAGTGCCAATTTAGCCAATTAATTTGGGTTTAGTTTTGATATGGATAAGGGAGACTGGCTTCATTCATGATGCACACACAGTTTTGCCAGTAAGG-AAAAAAAAAGCAACCTGAATGTTCCTACTCATTAGATGCTATCTGGACAGCTCCTACCCCAATGCCACAAAGGCCCGGGCCCTTAAAAAGACTCAATGCAGCATTTCTGCGTCTCATACTGTATTCTGTAAGATACTCCTGTGAAAGAAATTTGTTGTGCATCAGCCatctccctcctgaagatccctgcggatgactatttgtgttttaaaggttctgagaagtcctgcaaaaacagttctcaaacttattcgtccaggggatcttttcttccaCTGAACATAGTTGGGTAGACACGGCCTTAAGCCTTGAGTGGAGAAAGAGACAAGAAACTGTTGGCTCACTTACAACCAAGTGTTGTGTTTATGTTTTAGGTTTTTATGAAACTGAGGTGCTGTTTGAGGTTCTGAATCAAATTGGGTGGTTGAAGAGAGGCTGGTATCCCTGTAGACTTAGCCAGCCATGAGAGGTTGACTTTTGTTGAAGGAGGTGTTTTACAAAGGGAAATAGGGTGTCTCCTGGGCATCACATTAGTACTTAAATACATGTATCACTGAAATGAAATGAAATGATGAAATGATG s panPan2.chr12 82688076 1409 - 135337776 TAGTGTCTTGTCATCCGTTTTGGCTTTCTCCCTGACTCCAGAATGCAGGTAGAGATGTAGAGACATGCTCTCAGGACAGCTGTTGAGATGAAAAAAATTCGTTGTCATTTATTCCCAAGGACAGCTGTTTGCTATTTGCATTGAAAAAGTCTCCATTCAAACTGCTGTCACATATAAAATCtatttatatgtctgtatttttctgttgtatttgcctttgtGGGCAGAAGTGTGTTTTAACCGAGCAAACTGTCCTTCCAAATAATGAAGTCGAAGTCAGCCTACC------TGTTTACCATTTTTCTTCCCCTTCCATTTTTCTAACATCAGGATAATTGTAAGAATGaattaagatttgtgtttaaggctgggcacagtgtctcaggcctgtaatctcagcactttgggaggcggagatggatgtatcgtttgatctcaggagttgaagaccagcctgggcaacatactgagactccgtcttgtataattaaattaaaaattaaaaAA-GGAGAGAAAAGGACCTGTGTTTAAAGTTTTTTAAAAAGGAGGGAAGGTGTTATGCAAAATGTGGACTATGCTAGCTATGATTGGGAAAAATAATTTTTCATACAGCATTATCTGTTGACTTGTATTAGCAGCATACTGGTCATAAGCGTTTTGCTTTCCTCAAATATGATGAGGTAAGCTACTTTAAAGTGTGGTGGGGCTTTCTTCCACATGGCTCCTGGAGGTGTTGAGTCCTAATTTAGCCAATTAATTTGGGTTTAGTTTTGATATGGATGAGGGAGACCAGCTTCATTCATGATGCACACACAGTTTTGCCAGTAAGG-AAAAAAAAAGCAACCTGAATGTTCCTACTCATTAGATGCTATCTGAACAGCTCCTGCCCCACTGCCACAAAGGCCCTGGCCCTTAAAAAGACTCAATGCAGCCTTTCTGCATCTCATACTGTATTCTGCAAGATGCTCCTGTGAAAGACAGTTGTgctgcatcagccatctccctcctgaagatcaccgtggatgaggatttgtgttttaaaggttctgagaagtcctgcaacaacagttctcaaacttatttgtccaggggatcttttcttccaCTGAACATAGTTGGGGAGACACGGCCTTAAGCCTTGAGCAGAGAAAGAGACAAGAAACTGTTGGTTCACTTACAACCAAGTGTTGTGTTTATGTTTTAGGTTTTTATGAAACTGGGGTGCTCTTTGAGGTTCTGAATCAAATTGGGTGGTTGAAGAGAGGCTGGTATCCCTGTAGACTTAGCCAGCGATGAGAGGTTGAGTTTTGTTGAAGGAGGTGTTTTACAAAGGGAAATAGGGTGTTTCCTGGGCATCACATTAGCACTTAAATACATGTATCACTGAAATGAAatgaaatgatgaaatgatg i panPan2.chr12 N 0 C 0 s gorGor5.CYUI01000341v1 114108 1392 + 150013 TAGTGTCTTGTCGTCCGTTTTGGCTTTCTCCCTGACTCCAGAATGCAGGTAGAGATGTAGAGACATGCTC-CAGGACAGCTGTTGAGATAAAAAAAATTCGTTGTCATTTATTCCCAAGGACAGCTGTTTGTCATTTGCATTGAAAAAGTCTCCATTCAAAC-GCTGTCACATATAAAATCTATTTATATGTCTGTA-TTTTCTGTTGTCTTGGCCTTTGTGGGCAGTAGTGTGTTTTAACTGAGCAAACTGTCCTTCCAAATAATGAAGCCGAAGTCAGCCTACC------TGCTTGCCATTTTTCTTCCCCTTCCATTTTTCTAACCTCAGGATAATTGTAAGAATGaattaagatttgtgtttaaggccgggcacagtgtctcaggcctgtaatctcagcactttgggaggcggagacggatgtatcgcttgagctcaggagttgaagaccagcctgggcaacatactgagactccgtcttgtataattaaattaaaatttaaaAAA-GGAGAGAAAAGGACC-GTGTTTAAAATTT---AAAAAAAGGGGGAAGTGTAATGCAAAATGTGGACTATGCTAGCTATGATTGGGAAAAATAATTTTTCATACAGCATTATCTGTTGACTTGTATTAGCAGCATACTGGTCATAAGCGTTTTGCTTTC-TCAAATATGATGAGGTAAGCTACTTTAAAGTGTGGTGGGGCTTTCTTCTGCATGGCTCCTGGAGGTGTTGAGTCCCAATTTAGCCAATTAATTTGGGTTTAGTTTTGATATGGATAAGGGAGAC-GGCTTCATTCATGATGCACACACAGTTTTGCCAGTAAGGAAAAAAAAAAGCAACCTGAATGTTCCTACTCATTAGATGCTATCTGGAGAGCTCCTACCCCACC-CCACCAAGG-CCTGGCCCTTAAAAAGACTCAATGCAGCCTTTCTGTATCTCATACTGTAttctgcaagatgctcctgtgaaagaaagttgtgctgcatcagtcatctccctcctgaagatccctgcggatgaggatttgtgttttaaaggttctcagaagtcctgcaacaacagttctcaaacttatttgtccaggggatcttttcttccaCTGAACATAGTTGGGGAGACACGGCCTTAAGCCTTGAGCAGAGAAAGAGACAAGAAACTGTTGGCTCACTTACAACCAAGTGTTGTGTTTATGTTTTAGGTTTTTATGAAACTGAGGTGCTGTTTGAGGTTCTGAATC-AATTGGGTGGTTGAAGAGAGGCTGGTATCCCTGTAGACTTAGCCAGCCATGAGAGGTTGACTTTTGTTGAAGGAGGTGTTTTACAAAGGGAAATAGGGTGTCTCCTGGGCATCACATTAGCACTTAAATACATGTATCACtgaaatgaaatgaaatgatgaa------ i gorGor5.CYUI01000341v1 N 0 C 0 a score=340.000000 s hg38.chr22_KI270732v1_random 1411 3 + 41543 ACA s panPan2.chr12 82689485 3 - 135337776 aca i panPan2.chr12 C 0 C 0 s papAnu3.chr1 161732319 3 - 220367699 ATG i papAnu3.chr1 N 0 I 66 e gorGor5.CYUI01000341v1 115500 0 + 150013 C a score=1324.000000 s hg38.chr22_KI270732v1_random 1414 8 + 41543 TGAAATGA s panPan2.chr12 82689488 8 - 135337776 tgaaatga i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115500 7 + 150013 -tgaatga i gorGor5.CYUI01000341v1 C 0 C 0 e papAnu3.chr1 161732322 66 - 220367699 I a score=1362.000000 s hg38.chr22_KI270732v1_random 1422 6 + 41543 AATGAA s panPan2.chr12 82689496 6 - 135337776 aatgat i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115507 6 + 150013 aatgat i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938697v1 500674 6 - 527115 AGTGTG i tarSyr2.KE938697v1 N 0 C 0 e papAnu3.chr1 161732322 66 - 220367699 I a score=851.000000 s hg38.chr22_KI270732v1_random 1428 4 + 41543 ATGA s panPan2.chr12 82689502 4 - 135337776 ggaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115513 4 + 150013 gaaa i gorGor5.CYUI01000341v1 C 0 C 0 s rhiBie1.NW_016865837v1 53 4 - 665 ATGA i rhiBie1.NW_016865837v1 N 0 I 26 s tarSyr2.KE938697v1 500680 4 - 527115 GTGA i tarSyr2.KE938697v1 C 0 C 0 e papAnu3.chr1 161732322 66 - 220367699 I a score=-2828.000000 s hg38.chr22_KI270732v1_random 1432 5 + 41543 TGAA---A-- s panPan2.chr12 82689506 8 - 135337776 caaaatga-- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115517 7 + 150013 gaaa-tga-- i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938697v1 500684 5 - 527115 -----TGTCT i tarSyr2.KE938697v1 C 0 I 111 e rhiBie1.NW_016865837v1 57 26 - 665 I e papAnu3.chr1 161732322 66 - 220367699 I a score=4380.000000 s hg38.chr22_KI270732v1_random 1437 21 + 41543 TGAAATGATGAAATGAAATGA s panPan2.chr12 82689514 21 - 135337776 tgaaatgatgaaatgaaatta i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115524 20 + 150013 t-aaatgatgaaatgaaatga i gorGor5.CYUI01000341v1 C 0 C 0 e rhiBie1.NW_016865837v1 57 26 - 665 I e tarSyr2.KE938697v1 500689 111 - 527115 I e papAnu3.chr1 161732322 66 - 220367699 I a score=1638.000000 s hg38.chr22_KI270732v1_random 1458 3 + 41543 AAT s panPan2.chr12 82689535 3 - 135337776 aat i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115544 3 + 150013 aat i gorGor5.CYUI01000341v1 C 0 C 0 s rhiBie1.NW_016865837v1 83 3 - 665 AAT i rhiBie1.NW_016865837v1 I 26 I 18 e tarSyr2.KE938697v1 500689 111 - 527115 I e papAnu3.chr1 161732322 66 - 220367699 I a score=966.000000 s hg38.chr22_KI270732v1_random 1461 18 + 41543 GATAAAATGATGAAATGA s panPan2.chr12 82689538 13 - 135337776 gataaaatg-----atga i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115547 13 + 150013 ----aaatgatgaaatg- i gorGor5.CYUI01000341v1 C 0 C 0 e rhiBie1.NW_016865837v1 86 18 - 665 I e tarSyr2.KE938697v1 500689 111 - 527115 I e papAnu3.chr1 161732322 66 - 220367699 I a score=729.000000 s hg38.chr22_KI270732v1_random 1479 2 + 41543 AA s panPan2.chr12 82689551 2 - 135337776 aa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115560 1 + 150013 -a i gorGor5.CYUI01000341v1 C 0 C 0 s rhiBie1.NW_016865837v1 104 2 - 665 AA i rhiBie1.NW_016865837v1 I 18 I 57 e tarSyr2.KE938697v1 500689 111 - 527115 I e papAnu3.chr1 161732322 66 - 220367699 I a score=1119.000000 s hg38.chr22_KI270732v1_random 1481 4 + 41543 TGAA s panPan2.chr12 82689553 4 - 135337776 tgaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115561 4 + 150013 tgaa i gorGor5.CYUI01000341v1 C 0 C 0 e rhiBie1.NW_016865837v1 106 57 - 665 I e tarSyr2.KE938697v1 500689 111 - 527115 I e papAnu3.chr1 161732322 66 - 220367699 I a score=960.000000 s hg38.chr22_KI270732v1_random 1485 3 + 41543 ATG s panPan2.chr12 82689557 3 - 135337776 atg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115565 3 + 150013 atg i gorGor5.CYUI01000341v1 C 0 C 0 s papAnu3.chr1 161732388 3 - 220367699 GCG i papAnu3.chr1 I 66 I 158 e rhiBie1.NW_016865837v1 106 57 - 665 I e tarSyr2.KE938697v1 500689 111 - 527115 I a score=7083.000000 s hg38.chr22_KI270732v1_random 1488 40 + 41543 ATGAGATAAAGTGAAATGGTGAAATGATGAAATGAAATG---C s panPan2.chr12 82689560 40 - 135337776 atgagatgaaatgaaatgatgaaatgattaaacggaatg---a i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115568 42 + 150013 atga-atgaaatgaaatggtgaaatgatgaaatgaaatgtaaa i gorGor5.CYUI01000341v1 C 0 C 0 e rhiBie1.NW_016865837v1 106 57 - 665 I e tarSyr2.KE938697v1 500689 111 - 527115 I e papAnu3.chr1 161732391 158 - 220367699 I a score=1146.000000 s hg38.chr22_KI270732v1_random 1528 2 + 41543 TG s panPan2.chr12 82689600 2 - 135337776 tg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115610 2 + 150013 tg i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938697v1 500800 2 - 527115 TG i tarSyr2.KE938697v1 I 111 C 0 e rhiBie1.NW_016865837v1 106 57 - 665 I e papAnu3.chr1 161732391 158 - 220367699 I a score=-1666.000000 s hg38.chr22_KI270732v1_random 1530 5 + 41543 A--AATG- s panPan2.chr12 82689602 5 - 135337776 a--aatg- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115612 7 + 150013 atgaatg- i gorGor5.CYUI01000341v1 C 0 C 0 s nasLar1.chrUn_JMHX01072653v1 102 5 - 242 --CAATG- i nasLar1.chrUn_JMHX01072653v1 N 0 I 133 s tarSyr2.KE938697v1 500802 5 - 527115 ---AAGAG i tarSyr2.KE938697v1 C 0 C 0 e rhiBie1.NW_016865837v1 106 57 - 665 I e papAnu3.chr1 161732391 158 - 220367699 I a score=582.000000 s hg38.chr22_KI270732v1_random 1535 6 + 41543 AAATGA-- s panPan2.chr12 82689607 6 - 135337776 aaatga-- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115619 6 + 150013 aaatga-- i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938697v1 500807 6 - 527115 --ATGTGT i tarSyr2.KE938697v1 C 0 C 0 e nasLar1.chrUn_JMHX01072653v1 107 133 - 242 I e rhiBie1.NW_016865837v1 106 57 - 665 I e papAnu3.chr1 161732391 158 - 220367699 I a score=5614.000000 s hg38.chr22_KI270732v1_random 1541 11 + 41543 TGAA---ATGAAAT s panPan2.chr12 82689613 14 - 135337776 tgaaatgatgaaat i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115625 11 + 150013 tgaa---atgaaat i gorGor5.CYUI01000341v1 C 0 C 0 s rhiBie1.NW_016865837v1 163 11 - 665 TGAA---ATGAAAT i rhiBie1.NW_016865837v1 I 57 I 60 s tarSyr2.KE938697v1 500813 11 - 527115 TGAG---AGGAAGG i tarSyr2.KE938697v1 C 0 C 0 e nasLar1.chrUn_JMHX01072653v1 107 133 - 242 I e papAnu3.chr1 161732391 158 - 220367699 I a score=14146.000000 s hg38.chr22_KI270732v1_random 1552 70 + 41543 GATGAGATGAAATGAAATGATGAAATGAAATGGTGGAATGAAATGAGGA-----------AATGAAATGAAATGCTGAAAT s panPan2.chr12 82689627 65 - 135337776 gaaatggtgcaatgaaatgaggaaatgaaatgctgaaatgaaatg----------------atgaagtgaaatggtgaaat i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115636 80 + 150013 gaaatgatgaaatg-aatgatgaaatggaatgatgaaatgaaatgatgaaatgtgaaatgaatgaaatgaaatgatgaaat i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938697v1 500824 70 - 527115 AAAGAGGTGAGGTAATGTCATGAGGTGAAGTAAAGAGGTTAAGTGATGT-----------GGTGAGGTAACATGCTAAGGT i tarSyr2.KE938697v1 C 0 C 0 e nasLar1.chrUn_JMHX01072653v1 107 133 - 242 I e rhiBie1.NW_016865837v1 174 60 - 665 I e papAnu3.chr1 161732391 158 - 220367699 I a score=142.000000 s hg38.chr22_KI270732v1_random 1622 21 + 41543 GAAATGATGAAGTGAAATGGT----------------------- s panPan2.chr12 82689692 13 - 135337776 gaaa--------tgaaatgat----------------------- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115716 16 + 150013 gatg-----aagtgaaatggt----------------------- i gorGor5.CYUI01000341v1 C 0 C 0 s rhiBie1.NW_016865837v1 234 21 - 665 CAAATGATGAAACGAAACGAT----------------------- i rhiBie1.NW_016865837v1 I 60 C 0 s tarSyr2.KE938697v1 500894 44 - 527115 GAAGTAAAGAAGTCAAGTGATGTCCTGAGGTGACAGGCTGAGGT i tarSyr2.KE938697v1 C 0 C 0 e nasLar1.chrUn_JMHX01072653v1 107 133 - 242 I e papAnu3.chr1 161732391 158 - 220367699 I a score=2855.000000 s hg38.chr22_KI270732v1_random 1643 8 + 41543 GAAATGAA s panPan2.chr12 82689705 6 - 135337776 gaaatg-- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115732 8 + 150013 gaaatgaa i gorGor5.CYUI01000341v1 C 0 C 0 s papAnu3.chr1 161732549 8 - 220367699 GAGGTGAT i papAnu3.chr1 I 158 N 0 s rhiBie1.NW_016865837v1 255 8 - 665 GAAACGAA i rhiBie1.NW_016865837v1 C 0 C 0 s tarSyr2.KE938697v1 500938 8 - 527115 GTGATAAG i tarSyr2.KE938697v1 C 0 C 0 e nasLar1.chrUn_JMHX01072653v1 107 133 - 242 I a score=2819.000000 s hg38.chr22_KI270732v1_random 1651 8 + 41543 ATGAAATG s panPan2.chr12 82689711 8 - 135337776 atgaaatg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115740 7 + 150013 atg-aatg i gorGor5.CYUI01000341v1 C 0 C 0 s rhiBie1.NW_016865837v1 263 8 - 665 TTGAAATG i rhiBie1.NW_016865837v1 C 0 I 48 s tarSyr2.KE938697v1 500946 8 - 527115 GTGATGTG i tarSyr2.KE938697v1 C 0 C 0 e nasLar1.chrUn_JMHX01072653v1 107 133 - 242 I a score=5031.000000 s hg38.chr22_KI270732v1_random 1659 14 + 41543 ATGAAATGAAGAAA s panPan2.chr12 82689719 14 - 135337776 atgaaatgaagaaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115747 14 + 150013 atgaaatgatgaaa i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938697v1 500954 14 - 527115 ATTAGGTAAAGAAG i tarSyr2.KE938697v1 C 0 C 0 e nasLar1.chrUn_JMHX01072653v1 107 133 - 242 I e rhiBie1.NW_016865837v1 271 48 - 665 I a score=1386.000000 s hg38.chr22_KI270732v1_random 1673 2 + 41543 TG s panPan2.chr12 82689733 2 - 135337776 tg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115761 2 + 150013 tg i gorGor5.CYUI01000341v1 C 0 C 0 s nasLar1.chrUn_JMHX01072653v1 240 2 - 242 TG i nasLar1.chrUn_JMHX01072653v1 I 133 N 0 s tarSyr2.KE938697v1 500968 2 - 527115 TA i tarSyr2.KE938697v1 C 0 C 0 e rhiBie1.NW_016865837v1 271 48 - 665 I a score=4390.000000 s hg38.chr22_KI270732v1_random 1675 27 + 41543 GTATGAAATG-----ATGAAATGAAATGATGA s panPan2.chr12 82689735 22 - 135337776 gtatgaaatg----------atgaaatgatga i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115763 29 + 150013 a---gaaatgatgagatgaaatgaaatgatga i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938697v1 500970 25 - 527115 --ATGACATG-----CTGAGGTGACATATTGA i tarSyr2.KE938697v1 C 0 C 0 e rhiBie1.NW_016865837v1 271 48 - 665 I a score=1266.000000 s hg38.chr22_KI270732v1_random 1702 3 + 41543 AAT s panPan2.chr12 82689757 3 - 135337776 aat i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115792 3 + 150013 aat i gorGor5.CYUI01000341v1 C 0 C 0 s rhiBie1.NW_016865837v1 319 3 - 665 AAC i rhiBie1.NW_016865837v1 I 48 N 0 s tarSyr2.KE938697v1 500995 3 - 527115 GGT i tarSyr2.KE938697v1 C 0 C 0 a score=10296.000000 s hg38.chr22_KI270732v1_random 1705 27 + 41543 GAAGTGAAATGATGAAATAATGAAATG s panPan2.chr12 82689760 27 - 135337776 gaagtgaaatgatgaaataatgaaatg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115795 27 + 150013 gaagtgaaatgatgaaataatgaaatg i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938697v1 500998 27 - 527115 GAAGTAAAGACTTGAGGTGATAAACTG i tarSyr2.KE938697v1 C 0 N 0 a score=873.000000 s hg38.chr22_KI270732v1_random 1732 3 + 41543 Agg s panPan2.chr12 82689787 3 - 135337776 agg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115822 3 + 150013 agg i gorGor5.CYUI01000341v1 C 0 C 0 a score=2553.000000 s hg38.chr22_KI270732v1_random 1735 5 + 41543 ggtgg s panPan2.chr12 82689790 5 - 135337776 ggtgg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115825 5 + 150013 ggtgg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40150091 5 - 81552678 GATgg i nomLeu3.chr19 N 0 C 0 a score=4287820.000000 s hg38.chr22_KI270732v1_random 1740 5396 + 41543 agccaagatggccgaacaggaacagctccggtctacagctcccagcgtgagtgacacagaagacgggtgatttctgcatttccatctaaggtaccaggttcatctcactaagggagtgccaaacagtgggtgcaggacagtgggtatagcccaccgtgtgggagccgaagctggtcgaggcattgcctcactcaggaagcacaaggggtcagggagttccctttcctagtcaaagaaaggggtgacagatggcacctggaaaatcgggtcactctcaccctaatactgcacttttccaacaggcttggaaaacggcacaccaggagattgtgtcctgcacctgtctcggagggtcttatgccaatggagacttgctgattgctagcatggcactctgagatcaaactgcaaggcggcagcgaggctggggcagtggggcccgccattgcccaggctttcttaggtaaacaaagcagccaggcagctggaactggggggagcccaccacagctccaggaggcctgtctgcctctgtaggctccacctctgggggcagggcacagacaaacaaaaagtcagcagtaacctctgcagatt-aaatgtccctatctgacagctttgaagagagtagtggttctcccaacacgcaactggagatctgagactgggcagactgcctcctaaagtgggtcactgaaccccga-------gcagcctaactgggaggcactcccctgtagggacagactgacacctcactcggccgggtagtcctctgagaccaaacttccagaggaatgatcagacagctgaatttgttgttcacgaaaatccgctgttctgcagccactgctgctgatacccaggcaaacagggtccggcgtggacctctagcaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaa----cacccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagttgataaaaccacaaagatggggagaaaacagagcagaaaaactggaaactctaaaaagcagagtgcctctccttctccaaaggaacgcagttcctcaacagcaatggaataaaactggacagagaataactttgacgatttgagagaaggaggcttcagatgatcaaactactgcaagctacaggaggaaattcaaaccaatagcaaagaagttaaaaactttgaaaaacaattagacgaatgtataactggaataatcaatgcagagaaatgcttaaagtatctgatggagctgaaagccaagtttcgagaactacgtgaagaaggcagaagcctcaggagccgatgcaatcaactggaagaaagggtatcagtgatggaagatgaaatgaattaaatgaagggagaagggaagtttagagaaaaaagaataaaaagaaacgaacaaagcctccaagaaatatgggactatgtgaaaagatgaaacctacgtctgattggggtacctgaaagtgatggggagaatggaactaagttggaaaacactctgcaagatattatccaggaggacttccccaatctagcaaggcaggccaacattcagattcaggagatacagagaacgccacaaagatactcctcaataagagaaactccaagacacataattgtgaaattcaccaaagttgaaatgaaggaaaaaatgtgaagggcagccagagagaaagggcgggttacccacaaaggggaagcccatcagactaacagctgatctctcggcagaaattcttcaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttatcaccaccaggcctgccctaaaagtgctcctgaaggaagcactaaacatggaaaaggacaactggtaccagccactgcaaaaacatgccaaattgtaaagaccatcgagactaggaagaaactgcatcaactaacaagcaaaataaccagctaacatcataatggcaggatc-aaattcacacataacaatattaactttaaatgtaaatgggctaaatgctccaattaaaagacacagactggcaaattggataaggagacaagacccatcagggtgctgtattcaggaaacccatctcacgtgcagagacacacatagactcaaaataaagggatggaagaagatctaccaagcaaatggaaaacaaaaaaa-ggcagggtttgcaatcctagtctctgataaaatagactttaaaccaacaaagatcaaaagagacaaagaaggcctttacataatggtaaagggatcaattcaacaagaagagctaactatcctacatatatatgcacccaatacaggagcacccagattcctaaagcaagtcctgagtgacctacaaagagacttagactcccccacaatcataatgggagattttaacacgccactgtcaacattagacagatcaacgagacagaaagttaacaaggatacccaggaattgaactcagctctgcaccaagcacacctaatagacatctacagaactctcgaccccaaatcaacagaatatacatttttttcagcaccacaccacacccattctaaacgtgatcacatagttggaagtaaagctctcctcagcaaatataaaagaacagaaattataacaaactgtctcgcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaaccgctcaactacatggaaaatgaacaacctgctccggaatgaccactgggtacataacaaaatgaaggcagaaataaagatgttgtttgaaaccaacgagaacaaagacaaaacataccagaatctctgggacacactcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaacttgaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatc-gagcagaactgaaggaaatagagacac-aaaaaacccttcaaaaaactaatgaatccagcagctggttttttgaagagatcaacaaaattgatagaccactagcaagactaataaagaagaaaagagagaagaatcaaatagacgcaacaaaaattgatgaagggg-ttatcaccactgatcccacagaaatacaatctaccatcacagaaaactacaaacacctctactcaaataaactagaaaatctagaagaaatggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatatctgaatagatcaataacaggctctgaaattgtggcaataatcaatagtttaccaaccaaaaagagtctaggaccagatggattcacagctgaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagagggattcctctctaactaattttatgagaccagcatcatcctgataccaaaggcgggcacagacacaac-aaaaaaagagaattttagaccaatatccttcatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaacatatgcaaatcaataaacgtaatccagcatataaacctaaccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacggcccttcatgctaaaaattctcaataaattaggtgttgatgggacgtatctcaaaataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccttttgaaaactggcacacgacagggatgtcctctctcaccactcctattcaacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaacaaagggtattcaattaggaaaagaggaagtcaaactctccccttttgcagatgacatgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttgtacaccaataacagacaaacagagtgcccgatcatgagggaactcccattcac-aattgcttcaaagagaataaaaggcctaggaacccaacttacaagggacatgaaggacatcttcaaggagaactgcaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacatcccaagctcttgggttggaagaataaatatcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccctcaagctaccaatgactttcttcacagaattggaaaagacgactttaaagtacatatggaaccaaaaaagagcccgcatcaccaagtcaatcctaagccaaaagaacaaagctggaggcataacgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgttactggtaccaaaacacagacatagatcaatggaacaggacagagccctcagaaataatgccgcataactacaactgtctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaacctgaaactggatcccttccttacacctcatacaaaaattaattcaagttggatcaaagacttacatgttagacctaaaatcataaaaaccctagaagaaaacctaggcaataccattcaggacataggcgtgggcaaggacttcatgtctaaaacaccaaaagcaatgggaacaaaagccaaaattgacaaa-gggatctcattaaactaaagagcttctgcacagcaaaaggaactaccatcagagtgaacaggcaacctacaaaatgggagaaaatttttgcaacctactcatctgacaaagggctaataaccagaatctacaatgaactcaaccaaatttacaagtaaaacacaa----ccccatcaaaaagtgggtgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaagaaatgctcatcatcactggccatca s panTro5.chr2B 114747520 5402 - 133216015 agccaagatggccaaataggaacagctccggtctacagctcccagtgtcagcaatgcagaagacgggtgatttctgcatttccatctcaggtaccaggttcatctcacta-gggagtgccagacagcagacgcaggacagtgggtgcagtgcacagttcatgagccgaagcagggtgaggcactgcctcactcagcaagtgcaaggggtcagggagttccctttcctagtcaaagaaaggggtgacagacggcacctggaaaatcgggtaactcccaccctaatactgtgcttttccgatggtcttaacaaacggcgcaccaggagattatatcctgcacctggctcagagggtgatacgcccacggagtctcgctgattgctatcacagcagtctgagatcaaactgcaaggcggcagcaaggcttggggagggtcgctcgccattgcccaggcttgcgtaggtaaacaaagcagccagg-aactcgaactgggtgcagcccaccacagctcaaggaggcctgcctgcctctttaggctccacctctgggggcagggcagagacaaacaaaaagacagcagtaacctctgcagatttaaatgtccctgtctgacagctttgaagagagcagtggttctcccagcacacagctggagatctgagaacaggcagactgcctcctcaagtgggtccctgacccctgacccccaagcagcctaactgggaggcaccccccagtacgggcagactgacacctcacatggccgggttctcctctgagacaaaacttccagaggaatgatcagacagcagcattcgcggttcatgaaaatctgctgttcttcagccactgctgctaatacccaggcaaacagggtctggagtggacctctagaaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaacttacaaacagaaaggacataaacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagatacaaccacaaagatggggaaaaaacagagcagaaaaattggaaattctaaaaagcagagcacctctcctcctccaaaggaatgcagttcctcaccagcaatggaaaaaagctgggtggagaatgactttgatgagttgagagaagaaggcttcagacgatcaaactactctgagctacaggaggaaattcaaaccaaaggcaaagaagttaaaaactttgaaaaaaatttagacgaatgtatatctagaataaccaatacagagaagtgcttaaaggagctgatggagctgaaagccaaggctcgagaactacgtgaagaatgcagaagcttcaggagccgatgcgatcaactggaagaaagggtataagtgatggaagaagaaatgaatgaaatgaagtgagaagggaagtttagagaaaaaagaataaaaagaaacgaacaaa-ccttcaagaaatatgggactatgtgaaaagaccaaatctacgtctgattggtgtacctgaaactgacggggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttccccaatatagcaaggcaggccaacattcagattcaggaaatacagagaacgccacaaagatactcctcgggaagagcgattccaagacacataattgtcagattcaccatagttgaaaggaaggaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaaggg-aagcccatcagactaacagcagatctcttggcagaaactctagaagccagaagagagtgggggccaatattcaacattctttaagaaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgacctaaaagagctcctgaaggaagcgctaaacatggagaggaacaaccagtaccagccactgcaaaatcatgccaaaatgtaaagatcatcgagacaaggaagaaactgcatcaactaacgagcaaaataaccagctagcatcataatgacaggatc-aaattcacacataacaatattaactttaaatgtaaatggactaaatgctccaattaaaagacacagactggcaaattggataaaaagtcaagacccatcaatgtgctgtgttcaggaa-cccatctcacgtgcagagacacacatatgctcaaaataaaaggatggaggaagatctac-aagcaaatggaaaacaaaaaaaaggcaggggttgcgatcctagtctctgataaaacacaccttaaaccaacaaagatcaaaacagacaaagaaggccactacataatggtaaagggatcaattcaatgagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccacacaataataatgagagattttaacaacccactgtcaacattagacagatcaatgaaacagaaagttaacaagggtacacaggaattgaactcagctctgcaccaagcagatctaatagacatctacagaactctccaccccaaatcaacagaatatacattcttctcagcaccacaccacacctattccaaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaaaagaaatcataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaagactgctcaactacatggaaactgaacaacctgctccagaataactactgggtacataaagaaatgaaggcagaaataaagatgttctttgaaaccaatgaaaaaaaagacacaacatacctgaatctctgggacacactcaaagcagtgtgtagagggaaatttatagcactaaatgcccgcaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacac-aaaaaacccttcaaaaaattaatgaatccaggagctgattttttgaaaagatcaacaaaattgatagaccactagcaagactaataaagaagataagagagaagaatcaaatatatgcaataaaaaatgataaagggg-ttatcaccaccactcccacagaaatacaatctaccatcagagaatactacaaacacctctacgcaaataaactagaaaatctagaagaaatggataaattcctcaagacgtacactctcccaagactaaaccaggaagaagttgaatctcggaatagaccaataacaggctctgaaattgtggcagtaatcaatagcttaccaacaaaaaagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacacaaccaaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaccaaatccagtagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgtcatgcaaggctggttcaacatatgcaaatcaataaatgtaatctagcatatcaacctaaccaaagacaaaaacgagatgatcatctcaatagatgcagaaaaggcctttgacaaaattcaacaactcttcatgctaaaaactctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctaagacaaacccacagtcaatatcaaactgaatgggcaaaaactggaagcattcactttgaaaactggcacaagacagggttgccctctctcaccactcctattccacatactgttggaagttctggccagggcaatcaggcaggagaaggaaacaa-ggctattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaaacccattttctcagcccaaaatctccttaagctgataagcaaattcagaaaagtctcaggatacaaaatcaatttacaaaaatcacaagcattcttgtacaacaataatagacaaacagagtgccaaatcatgagtgaactcccattcac-aattgcttcaaagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcatggagaactacaaaacactgctcaattaaataaaagaggatacagacaaatagaagaacattccatgctcacgggttggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttatagattcagtgccatccccatcaagctaccaatgactttcttcacagaattggaaaaagctactttaaagttcatatggaaccaaaaaagagcctgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatagtacaagactacagtaaccaaaacaacatggtactggtaccaaaacagagacatagatcaatggaacagaacagagtcctcagaaataatgccacataactacaactatctgatctttgacaaacctgacaaaaacaagcaacggggaaag-attccctatttaataaatggagctgggaaaactggctagcattatgtagaaagctgaacctggatcccttccttacaccttatacaaaaattaattcaagatggattaaagacttacatgttagacctaaaactataaaaaccatagaagaaaacctaggcaataccattcaggacataggcatgggaaaggacttcaggtctaaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaatgggagaaaattttcgcaaccttctcttctgacaaagggctgatattcagaaactacaatgaactcaa----atttacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaaggacacgaacagacacttctcaaaagaagacatttatgcagccaaaaaaca--tgaaaaaatgttcatcatcactggccatca i panTro5.chr2B N 0 C 0 s panPan2.chr12 82689795 5391 - 135337776 agccaagatggccgaataggaacagctccggtctacagctcccagcatgagcgatgcagaagacgggtgatttctgcatttccatctgaggtaccgggttcatctcactaagggactgccaaacagtgggtgcaggacagtgggtgcagcccaccgtgtgggagccgaagcacagtgaggcattgcctcactcaggaagcacaaggggtcaggaagctccctttcctagtcaaagaatgaggtgacagatggcacctggaaaatcgggtcactctcaccctaatactgcagttttccaacaggcttggaaaacagcacaccaggagattgtgtcccacacctggcttggagggtcttatgccaatgaagtcttgctgattgctagcacggcactctgagatcaaactgcaaggtggcagcgaggctgggggagtgggtcccaccattgccctggctttcttaggtaaacaaagcagccaggcagctggaactgggtggaacccacaacagctccaggaggcctgcctgcctctgtaggctccacctctgggggcagggcatagacacacaaaaagtcagcagtaacctctgcagaattaaatgtccctgtctgacagctttgaagagagtagtggttctcccagcatgcaactggagatctgagactgggcagactgcctcctaaagtgggtcacggatccccga-------gcagcctaactgggaggcacacccctgtagggacagactgacacctcactcggcgaggtagtcctctcagaccaaacttccagaggaatgatcagacaactgaatttttggttcatgaaaatccgctgtcctgcagccaccgctgctgatacccaggcaaacagggtctggcatgggcctctagtaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacacccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagttgataaaaccacaaagatggggagaaaacagagcagaaaaactggaaactctaaaaagcagaattcttctccttctccaaaggaatgcaattccttaccagcaacggaacaaaactggacagagaataactttgacgatttgagagaagaaggcttcagatgatcaaattactgtgagctacaggaggaaattcaaaccaatagcaaaaaagttaaaaactttgaaaaacaattagacgaatgtataactggaataaccaatgcagagaaatgcttaaaggatctgaaggagctgaaagccaagtatcgagaactacgtgaagaaggcagaagcctcaggagccgatgcaatcaactggaagaaagggtatcagtgatggaagatgaaatgaatgaaaccaagggagaagggaaatttagagaaaaaagaataaaaagaaatgaacaaagcctccaggaattatgggactctgtgaaaagagcaaacctacgtctgattggtgtacctgaaagtgatggggagaatggaactaagttggaaaacactctgcaagatattatccaggaggacttctccaatctagcaaggcaggccaacattcagattcaagaaacacagagaacgccacaaagattctcctcaagaagagaaactccaagacacataattgtcaaattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaaagggaagcccatcagactaacagctgatctcttggcagaaactcttcaaggcagaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagggattt------------acttgccctaaaagagctcctgaaggaagcactaaacctgcaaaggaacaactggtaccagccactgcaaaaacatgccaaattgtaaagaccattgagactaggaagaaactgcatcaactaacgagcaaaataaccagctaacatcataatgacaggatc-aaattcacacataacaatattaactttaaatgtaaatgggctaaatgctccaattaaaagacacagactggcaaattggataaggagacaagacccatcagtgtgctgtattcaggaaacccatctctcgtgcagagacacacatagactcaaaataaagggatggaggaaggtctaccaagcaaatggaaaacaaaaaaa-ggcaggggttgcaatcctagtctgtgataaaatagactttaaactaacaaagatcaaaagagacaaagaaggacttcacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacagaagaacccagactcataaagcaagtcctgagtgacctacaaagagacttagacttccccacaaacataatgggagattttaacacgccactgtcaacattagacagatcaacgagacagaaagttagcaaggacacccaggaattgaacacagctctgcaccaagcgcacctaatagacatctacggaactctccaccccaaatcaacagagtatacatttttttcatcaccacaccacacccattccaaacttgatcacatagttggaagtaaagctctcctcagcaaatgtaaaagaacagaaattataacaaactgtctctgagaccacagtgcaatgaaactagaactcaggattaagaaactcactgaaaaccgctcaactacatggaaaatgaacaacctgctctggaatgaccactgggtacataacaaaatgaaggcagaaataaagatgttctttgaaaccaacgagagcaaagagaaaacataccagaatctctaggacacactcaatgcagtgtgtagagggaaatttatagcactaaatgcctgcaagagagagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaatttgaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaaacccttcaaaaaattaatgaatccagc-gctggttttttgaaaagatcaacaaaattgatagaccactagcaagactaataaagaagaaaagagagaagaatcaaatagacgcaacaaaaaatgataaaggtg-atatcaccaccgatcccacagaaatacaatttaccatcacagaaaactacaaacacctctatacaaataaactagaaaatctagaagaaatggataaattcctcgacacatacactttcccaagaccaaaggaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgtggcagtaatcaatagcttaccaaccaaaaagagtccaggaccagatggatttacagcagaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagagggattcctctctaactaattttatgaggccagcatcatcctgataccaaagccgggcagagacacaac----aaaaaagaattttagaccactatccttcatgaacattgatacaaaaatcctcaataaaatactggaaaactgaatccagcaacacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttccacatatgcaaatctataaacgtaatccaccatataaacctaaccaaggacaaaaaccacatgatgatctcaatagatgaagaaaaggcctttgacaaaattcaacagcccttcatgctaaaaattctcaataaattagttaatgatgggacttatctcaaaataatatgagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccttttgaaaactggcacacgacagggatgtcctctctcaccactcctattcaacatagtgttggaatttctggccagggcaattaggcaggagtaggaaacaaagggtattcaattaggaaaagaggaagtcaaattgtccccgtttgcagatgacatggttgtatatctagaaatccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaataacaagcattcttgtacaccaataacagacaaacagagtgcccaatcatgagtgaactcccattcac-aattgcttcaaagagaataaaatacctagtaacccaacttacaagggacatgaaggacatcttcaaggagaactgcaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcttgggttggaagagtcaatatcgtgaaaatggccataatgcccaaggtaatttatagattcaaagccatccccatcaagctaccaatgactttcttcacagaattggaaaaaacgactttaaagtacatatggaaccaaaaaagagcctgcatcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacatgacttcaaactatactacaaggctacagtaaccaaaacagcatgttactggtaccgaaacacagacatagatcaatggaacaggacagagccctcagaaataatgctgcatagctacaactgtctgatctttaacaaacctgagaaaaagaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagatgaaactggatctcttccttacaccttatacaaaaattaattcaagttggatcaaagacttacatgttagacctaaaatcataaaaaccctagaagaaaacctaggcaataccattcaggacataggcctgggcaaggacttcatgtctcaaacaccaaaagcaatgggaacaaaagccaaaattgacaaaggggatctaattaagctaaagaacttctgcacagcaaaagaagctaccatcagagtgaacaggcaacctacaaaatgggagaaaatttttgcaacctactcatctgacaaatggctgataaccagaatcaacaatgaacccaaacaaatttacatgtaaaacacaaacaatcctatcaaaaagtgggtgaaggacacggacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaa-aaatgctcatcatcactggtcatca i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 115830 5348 + 150013 agccaagatggccgaataggaacagctccagtctacagctcccagcatgagcgatgcagaagac-ggtgatttctgcatttccatctgaggtaccgggttcatctcactaagggagtgccaaactgtgggtgcaggacagtgggtgcagcc--acatgtgggag-cgaagca-ggtgaggcattg-----ctcaggaagcacaaggggtcagggagttccctttcctagtcaaagaaaggggtgacagatgacacctggaaaatagggtcactctcaccctaatactgcacttttccaacagtcttggaaaacggcacaccaggagattgtgtcccgcacctggctcagagggtcttatgccaatggagtcttgctgattgctagcacagcactctgagatcaaactgcaaggcggcagcgaggctgggg-agtggggcccgccattgcccaggctt-cttaggtaaacaaagcagccaggcagctggaactgggtggagcccacaacagctccaggaggcctgcctgcctctgtaggctccacctctgggggcagggcacagacacacaaaaagtcagcagtaacctctgcagacttaaatgtccctgtctgacagctttgaagagagtagtggttctcccagcatgcaactggagatctgagaatgggcagactgcctcctaaagtgggtcactgaaccccga-------gcagcctaactgggaggcac-ccccagtagggacagactgacacctcactcggccgggtagtcctctgagaccaaacttccagaggaatgatcagacagctgaatttgtggttcacgaaaatccgctgttctgcagccaccgctgctgatacccaggcaaaca-ggtctgg-gtggacctctagcaaactccaacagacctgcagctgagggtcctgtctgttagaaggaaaactaacaaacagaaaggacacccacaccaaaaacccatctgtacatca-catcatcaaagaccaaaagttgataaaaccacaaagatggggagaaaa-----cagaaaaactggaaactctaaaaagcagagtgcctctccttctccaaaggaatgcagttcctcaccagcaatggaacaaaactggacagagaataactttgacga-ttgagagaagaaggcttcagatgatcaaactactgcgagctacaggaggaaattcaaaccaatagcaaagaagttaaaaactttgaaaaacaattagatgaatgtataactggaataaccaatgcagagaaatgcttaaaggatctgatggagctgaaagccaagttttgagaactacgtgaagaaggcag-agcctcaggagccgatgcaatcaactggaagaaagggtatcagtgatggaagatgaaatgaatgaaatgaaggcagaagggaagtttagagaaaaaagaataaaaagaaacgaacaaagcctccaggaattatgggactatgtgaaaagaccaaacctacgtctgattggtgtacctgaaagtgacggggagaatggaactaagttggaaaacactctgcaagatattatccaggaggacttccccaatctagcaaggcaggccaacattcagattcaggaaacacagagaacgccacaaagatactcctcaagaagagaaactccaagacacataattgtcaaattcaccaaag-tgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggttacccacaaaggg-aagcccatcagactaacagctgatctctcagcagaaactcttcaagccagaagagagtgggggccaatattcaacattcttaaagaaaataattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcatc-ccaggcctgccctaaaagagctcctgaaggaagcactaaacatggaaaggaacaactggtaccagccactgcaaaaacatgccaaattgtaaagaccatcgagactaggaagaaactgcatcaactaacgagcaaaataaccagctaacatcataatgacaggatc-aaattcacacataacaatattaactttaaatgtaaatgg-ctaaatgctccaattaaaagacacagactggcaaattggataaggagtcaagacccatcagtgtgctgtattcaggaaacccatctcacgtgcagagacacacatagactcaaaataaagggatggaggaagatctaccaagcaaatggaaaacaaaaaaa-ggcaggggttgcaatcctagtctctgataaaatagactttaaaccaacaaagatcaaaagagacaaagaaggcctttacataatggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcacccaatacaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcccccacaatcataatgggagattttaacac-ccactgtcaacattaga-agatcaacgagacagaaagttagcaaggacacccaggaattgaactcagctctgcaccaag-gcacctaatagacatctacggaactctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacccattccaaacttgatcacatagttggaagtaaagctctcctcagcaaatgtaaaagaa-agaaattataacaaactgtctctgagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaaccgctcaactatatggaaaatgaacaacctgctccggaatgaccactgggtacataacaaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaaaacataccagaatctctgggacaca-tcaaagcagtgtgtagagggaaatttatagcactaaatgcc-acaagagaaagcaggaaagatccaaaattgacacccaaacatcacaattaaaagaacttgaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacac-aaaaaacccttcaaaaaattaatgaatccaggagctggttttttgaaaagatcaacaaaattgatagaccactagcaagactaataaagaagaaaagagagaagaatcaaatagacgcaacaaaaaatgataaaggggattatcaccaccgatcccacagaaatacaatctaccatcacagaaaactacaaacacctctac-caaataaactagaaaatctagaagaaatggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaagagggattcctctctaactaattttatgaggccagcatcatcctgataccaaagccgggcagagacacaac--aaaaaagagaattttagaccaatatccttcatgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaacatatgcaaatcaataaacgtaatccagcatataaacctaaccaaagacaaaaaccacatgattatctcaatagatgaagaaaaggcctttgacaaaattcaaca-cccttcatgctaaaaattctc-ataaattaggtattgatgggacgtatctcaaaataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccttttgaaaactggcaca-gacagggatgtcctctgtcaccactcctattcaacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaacaaagggtattcaattaggaaaagaggaa--tcaattgtccccgtttgcagatgacatgattgtatatctagaaaaccccattgtctcag-ccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattctt-tacaccaataacag----acagagtgcccaatcatgagggaactcccattcac-aattgcttcaaagagaataaaatacctaggaacccaacttacaaggga-atgaaggacatcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggttggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttctt-gcagaattggaaaaaacgactttaaagtacatatggaa-caaaaaagagcccgcatcgccaagtcaat-ctaagcc-aaagaacaaagctgga-gcatcacgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatg-tactggtaccaaaacacagacatagatcaatggaacaggacagagccctcagaaataatgccacataactacaactgtctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaagttggatcaaagacttacatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggct--ggcaaggacttcatgtctaaaacaccaaaagcaatgggaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaat-ggagaaaatttttgcaacctactcatctgacaaagggctaataaccagaatctacaatgaactcaaacaaatttacaagtaaaaaacaa----ccccatcaaaaagtgggtgaaggacacgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctcatcatcactggccatca i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40150096 5366 - 81552678 agccaagatggccgagtaggaacagctccagtctacagctcctggcatgagtgatgcagaagacgaatgatttctgcatttccaactgaggtactgggttcatctcgtta-gggattgttggacagtgggtgcaggacagtcggtgcagtgcaccgagcctgagcctaagcagggcaaagtatcgcctcaccctggaagtgcaaggggtcaggtaattccctttcctagtcaag---------gacagatggcacctggaaaatcagatcacttccagcctaatactgtgcttttccgacagtcttagc-agtggcacaccaggagattatgtcccgcgcctggttcggagagtcctatgcccatggagcctccctcactgctaacgcagcagtctgagatcaaactgcaaggtggcagtgaggctcggggaggggcgcctgccattgctgagtcttgagtaggtaaacaaagtggccaggaagctcaaactgggtggagcccaccgcagctcaaggaggcctgcctgcctctgtagactccacctctgggggcagggcatagccaaacaaaagg-cagcagaaacctctgcagacttaaatgtccctgtctgacagctttga--agtgtagtagttctcccagcacacagcttgagatcagagaatggacagactgcctcctcaagtgggtccctgacccccaa-------gaagactaactgggagtcac-ccccagtgggggcagactgacacctcccatggccaggtactcctctgagacaaaacttccagaggaacgatcaggcagcatcatttgctgttcatcaatattcgctgttctgcagattccactgcttatacccaggcaaacagggtctggaatggacctccaacaaccttcaacagacctgcagctgagggtcctgactgttacaaggataactaagaaacagaaaggagatcaacaccaaaaccccacctgtacgtcaccatcatcaaagaccaaaggtagataaaaccacagagatggggaaaaaacagagcagaaaaactcaaaattcgacaaatcagagtgcctctcctcctccaaaagaacacagctcctcaccagcaaaggaacaaagctggacagaggatgacttggacgagttgagagaagaaggcttcagacgatcaaacttctctgagctaaaggaggaagtttgaatcaatggcaaagaatttaaaaaccttgaaaaaatattaaatgaatggctaactagaataaccaatgcagagaaatccttaaaggacctgatggagctgaaaaccatggcacgagaactacgtgatgaaagcacaagcctcagtagccgatttgatcaactagaagaaagggtatcagtgatggaagatcgaatgaatgaaatgatgtgagaagagaagtttacaggaaaaagaacaaaaagaaatcaacaaagcctcccagaaatatgggactatgtgaaaagacgaaaactacatctaatttgtgtacttgaaagtgacggggagaatggaaccaagttggaaaacaatctgcaggatattatccaggagaacttccccaatctagcaaggcaggccaacattcagattcaggaaatacagagaatgccagaaacatactcctccagaagagtaactgcaagacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaaaggcagtcagagagaaaggtcgggttacccacaaaggg-aaacccatcagactaacagctgatctctcagcagaaactccacaagccggcagagagtgggggccaatattcaacgttcttgaagaaaagaattttcaacctagaatttcatatctagccaaactaaacttcataagtgaaggagaaataaaatactttacagaaaagaaaaggctgagagattttatcaccaccaggcctgccctgaaagagctcctgaaggaagaactaaacatggaaaggaagaaccggtaccagccactgcaaaaacatgctgaattttaaagacctttgaggctaggaagaaaccacatcaactaacaagcaaaataaccagctaacatcataatgacaggatcaaaattcacacataataatattaaccttaaatgtaaatgggttaaatgctccaattaaaagacatagactggcaaattggata--gagtcaagacccatcggtgtgctgtattccggaaatccatctcaggtgcagagaaacacataggctcaaaataaagggatggagaaagatctaccaagcaaatggaaaacaaaaaaa-ggaagggattgcaatcctagtctc--------------ttaaaccaacaaagatgaaaagagacaaagaaggccattacataatggtaaagggatcaattgaacaagaagaactaactatcttaaatatatatgcacccaatacaggagcacctagattcataaagcaagtctttagagacctacaaagagccttagactcccacacaataatagtggtagactttaacaccccactgtcaaaattaggcagatcaaggagacagaatgttaacaaggatatccaggaattgaatgcagctctgtaccaagcagacctaatagacatctagagaattctccaccccaaatcaacagaatatacattcttttcagcaccacaccacacctgttccaaaattgaccacgtgtttggaagtaaagcactcctcagccaatggaaaagaacagaaattataacacactgtctctcagaacacagtgcaataaaattagaactcaggattaagaaactcactcaaaaccactcaattacatggaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttctttaataccaatgagaacaaggacacaacataccagaatctgttggacacagtcaaagcagtgtgtagagggaaatttatagcaataaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaaccagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatagagacac-aaaaaaccc-taaaaaaattaatgaatctaggaggtagtttttagaaaagatcaacaaaattgatagaccgctagcaagactaat---gaagaaaagagagaagaatcaaatagacgcaataaaaaatgataacgggg-atatcaccagtgatctcacagaaatacaaaataccatcagagaatactacaaaaacctctatgaaaataaactaaaaagtctagaagaaatggataaattcctcgacatataaaccctcccaagactaaaccaggaagaagttgaatctctgaatagatcaatcacaggctctgaaattgtggcaataatcaatagcttaccaaccaaaaagagtccagaaccagatggattcacagcaaaattctaccagaggtacaaggaggaactggtaccattccttctgaaac-gttccaatcaatagaaaaagagggaatcctgcctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacataac-caaaaaagagaattttagaccaatgtccttgatgaacattgatgaaaaaatcctcaataaaatactggcaaaccaaatccagcagcacatcaaaaagcttatccaccatgatcaaatgagcttcatccctgggatgcaaggctggttcaacatacgcaaatcaataaacgtaatccagcacataaacagaaccgaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaaca-accttcaagctaaaaactctcagaaaattaggtattgatgagatgtatctcaaaataataagagctatctatgacaaacccacagccaatatcatactgaatgggaaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagagcaatcaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacattattttatatctagaaaaccccattgtcccagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaacgtacaaaaatcacaagcattcttatacaccagtgacagacaaagagagagccaaatcatgagtgaactcccattcacaaattgcttcaaagagaataaaatacctaggaatccaacttacaaggaacatgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat----acaaatggaagaacattccatgctcatgggttggaagaatcaatatcgtgaaaatggccatactgcccaagataatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcctgccttgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctacagtaaccaaaagagcatggtactggtaccaaaacagagacatagatcaatggaacagaacagagccctcagaaataatgctgcatgactacgactatctgatatttgacaaatctgacaaaaacaagcaatggggaaaggattccctatttaataaatagtgctgggaaaacagactagccatacgtagaaagttgaaactggatcccttccttacaccttatgcaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccataaaaaccctagaggaaaacctaggcaataccattcaggacataggcgtgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccacaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaaggaaaaaagaa-caaccctatcaaaaagtgggtgaaggacatgaacagacacttctcaaaagaagacatttatgcagccagaaaacacatgaaaaaatgctcatcatcactggccatca i nomLeu3.chr19 C 0 C 0 a score=441334.000000 s hg38.chr22_KI270732v1_random 7136 466 + 41543 gagaaatgcaaatcaaaaccacaatgagataccatctca----------------------------caccagttagaatggagatcattaaaaagtcaggaaacggcaggggctggagaggatgtggagaaataggaacacttttacactgtgggggggacggtaaactagttcaaccattgtggaagtcagtgtggcgattcctcaagtatctagaactagaaataccatgtgacccagccattccattactgggtgtatacacaaaa-gactataaatcatgctgcaataaagacaca----tgcacacgtatgtttattgcggcagtattcacaatagcaaagacttggaactatcccaaatgtccaacaacgatagactggattaagaaaatgtggcacatatacaccatggagtactatccagccacaaaaaa---tgagttcatgtcctatgtagggacatggatgaaactggaaatcatcattctcagtaaact s panTro5.chr2B 114752922 469 - 133216015 gagaaatgcaaatcaaaaccacaatgagatagcatctca----------------------------caccagttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccattgtggaagtcagcgtggcgattcctcagggatcgagaactagaaataccatttgacccagccatcccattactggatatatacccaaag-gactataaatcatgctgctataaagacaca----tgcacacgtatgtttattgcggcattattcacaatagcaaagacttggagccaacccaaatgtccaacaacgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtgctttgtagggacatggatgaaactggaaatcatcattctcagtaaact i panTro5.chr2B C 0 C 0 s panPan2.chr12 82695186 468 - 135337776 gagaaatgcaaatc-aaaccacaatgagataccatctca----------------------------cactagttagaatggtgatcattaaaaagtcaggaaacggcaggtactggagaggatgtggaggaataggaacacttttacactgtttgtgggatggtaaactagttcaaccattgtggaagtcagtgtggcgattcctcaagtatctagatctagaaataccatgtgaccctgccattccattagtgggtatatacacaaag-gactataaatcatgctgcaataaagacaca----tgcacacgtatgtttattgcggcagttttcacaatagcaaagacttggaaccatcccaaatgtccaacaacgatagactggattaagaaaatgaggcacttatacaccatggtgtactatgcagccacaaaaaatgatgagttcgtgtcctatgtagggacatggatgaaactggaaatcatcattctcagtaagct i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 121178 467 + 150013 gagaaatgcaaatcaaaaccacaatgagataccatctca----------------------------caccagttagaatggcgatcattaaaaagtcaggaaacggcaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaa-cattgt-gaagtcagtgtggcgattcctcaagtatctagaactagaaataccatgtgacccagccattccattactgggtatatacacaaag-gactataaatcatgctgcaataaagacaca----tgcacacgtatgtttattgcggcagtattcacaatagcaaagacttggaaccatcccaaatgtccaacaacgatagactggattaagaaaatgtggcacatatacaccatggagtactatgcagccataaaaaatgatgagttcatgtcctatgtagggacatggatgaaactggaaatcatcattctcagtaaact i gorGor5.CYUI01000341v1 C 0 I 509 s nomLeu3.chr19 40155462 466 - 81552678 gagaaatggaaatcaagaccacaatgagataccgtctca----------------------------caccacttagaatggcgatcattaaaaagtcaggaaacaacaggttctggagaggttgtggagaaattggaacacttttacactgttggtgggactataaactagttaaaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaatagcatttgacccagccatcccattactgggtatatacccaaag-gagtataaataat-ctgttataaagacaca----tgcacacgtatttttactgcagaactattcacaatagcaaagagttggaaccaacccaaatatccaacaacaatagactggattaagaaaatgtggcacatatacaccatggaatgctatgcagccat--aaaatgatgaattcatgtcctttgtagggacttggatgaaactggaaaccatcattctcagtaaact i nomLeu3.chr19 C 0 C 0 s canFam3.chr18 51753905 489 - 55844845 gagacatataaatcaaagccacaatgtgatattatcttcaggtatattcagatatatattcagatattgcccttcagaatgactagaattaaaaagacaagaaataacaagtgttggtgagggtgtggagaaagaggaattcttgggtattttgggcagga-tataaattggcacagccactgtggaaagaggaacataggttcctcaaaaatttaaaaatagaaataccatatgacccagtaattccactactgagtatttacccaaagaaaatgaaaataatacttcaa-aaagatatatatctgcatccctatgtttcttgcagcattatttacaatagccagtttacagaagcaatctaagcaaccgcagatagatgaatggataaaaaatgtgtgagaaatatatg-----------tatatttctatgaaaaaggataagaccttgccatttgtgacaatatggatggacctacagggtatttttctaagtgaaat i canFam3.chr18 N 0 C 0 a score=240825.000000 s hg38.chr22_KI270732v1_random 7602 327 + 41543 ctcgcaaggacaaaaaac-caaacaccgcatgttctcattcatatgtggg-tattgaacaatgagaacacatggacacaggaagggga--acatcacac---accag------------------ggactgttg-------------------------------tggggtggggggagtgg---------------------ggagggatagcattaagaga--------------------tatacctaatgcta-----------aatgacgagt-----taatgagtgcagcacac-caacatggcacatgaacact--------tatgttacaaacctgcacatggtgc-acatgtatcctaaaacttaaggtataataataaaataaaaTAGAATAAAATAACAAAATATACACTAATACAGATTAACCAACTAAAAAAATTGT s panTro5.chr2B 114753391 326 - 133216015 atcgcaaggacaaaaaag-caaacacagcatgttctcattcataggtggg-aattgaacaatgagaacacacggacaccggaagggga--acatcacac---ttcgg------------------ggactgttg-------------------------------tgtggtggggggagcgg---------------------ggagggatagcattaggaga--------------------tattcctaacacta-----------aatgacgagt-----tgatgggtgcagcacac-caacatggcacatgaatact--------tatgttgcaatcctgcatattgtgc-acatgtatcctaaaacttaaagtataataataaaataaaaTAAAATAAAAAAGCAAAATATACACTAATACAGATTAACCAACTaaaaaaat-gt i panTro5.chr2B C 0 C 0 s panPan2.chr12 82695654 324 - 135337776 ctcacaaggacaaaaaac-cagacaccacatgttatcattcatagatggg-tattgaacaatgagaacacatggacacaggaagggga--acatcacac---ttcgg------------------ggactgttg-------------------------------tgggctggggtgagtgg---------------------ggagggatagcattaggaga--------------------tatacctaatgcta-----------aatgacgagt-----taatgggtgcagcacac-caacatgacacatgaacact--------tatgttacaaacctgcacatggcgc-acatgtatcctaaaacttaaggtatagtaataaaataaaaTAGAATAAAAT---AAAATATACACTAATACAGATTAACCAACTAAAAAAATTGT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 122154 329 + 150013 ctcacaaggacaaaaaac-caaacaccacatgttctcattcataggtgggatattgaacaatgagaacacatggacacaggaaggggaacacatcacac---tttgg------------------ggactgttg-------------------------------tggggtggggggagtgg---------------------ggagggatagcattaggaga--------------------tatacctaatgcta-----------aatgacgagt-----taatgggtgcagcacac-caacatggcacatgaacact--------tatgttacaaacctgcacatggtgc-acatgtatcctaaaacttaaggtataataataaaataaaaTAAAATAAAAA-ACAAAATATACACTAATACAGATTAACCAACTAAAaaaatagt i gorGor5.CYUI01000341v1 I 509 C 0 s nomLeu3.chr19 40155928 321 - 81552678 atcgcaaggacaaaaaac-caaacattgcatgttctcactcgtaggtggg-aattgaacaatgagaacacttggacgcaggaagggga--acatcacac---ttcgg------------------ggactgttg-------------------------------tgggatggggggagagg---------------------ggagggacagcattaggaga--------------------tacacctaattcca-----------aatggcaagt-----taatgggtgcagcacac-caacgtggcacatgaatact--------tatgttacaaacttgcacattgtgc-acatgtatcctaaaactttaagtataataataaaataaaaTGAAAAA-----ACAAAATATACACTAATACAAATTAACCAACTAAGaaaaa-gt i nomLeu3.chr19 C 0 C 0 s canFam3.chr18 51754394 409 - 55844845 -aagccaggctaagaaagaaaaataccatacaacttcatttatatatgga--atctaaaaactaaaacaaaataaaacaaaaaaaaca--acaacaagcagaatcagattataagtacagagaatgaactgatggttgccagaggaaaagggagtggaggtaaaatgggtgaaggagagtgggagacttggccttctagtcatggaatgaatgtatcatgggaataaaagttactgcattagctatagtcaatggtgttgtaataggtggtgacagatggtagtaatgcttgtggtgaacacagcata--acatagacacttcaattactgtattgtacacctgaaactaatgtaacatgtgtggcaac--------tatagtcaaaaaagaaaAAAAaaaaagaaaaagaaa----------------------gggtaaaaaaa---- i canFam3.chr18 C 0 C 0 a score=17918.000000 s hg38.chr22_KI270732v1_random 7929 16 + 41543 AGAGTAAGTTCATtta s panTro5.chr2B 114753717 16 - 133216015 agagaaaggttattta i panTro5.chr2B C 0 C 0 s panPan2.chr12 82695978 16 - 135337776 AGAGAAAGGTCATTta i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 122483 15 + 150013 agagaaaggtcattt- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40156249 16 - 81552678 agagaaaggtcattta i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67294044 16 + 192294377 agagaaagatcattta i macFas5.chr3 N 0 C 0 s canFam3.chr18 51754803 16 - 55844845 gaggaatgatcatgaa i canFam3.chr18 C 0 C 0 a score=6006.000000 s hg38.chr22_KI270732v1_random 7945 1 + 41543 a s panTro5.chr2B 114753733 1 - 133216015 a i panTro5.chr2B C 0 C 0 s panPan2.chr12 82695994 1 - 135337776 a i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 122498 1 + 150013 a i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40156265 1 - 81552678 a i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133464380 1 - 185818997 a i rheMac8.chr3 N 0 C 0 s macNem1.NW_012011522v1 2775974 1 + 3123512 a i macNem1.NW_012011522v1 N 0 C 0 s cerAty1.NW_012000909v1 2496563 1 + 10077455 a i cerAty1.NW_012000909v1 N 0 C 0 s chlSab2.chr21 5702610 1 + 127223203 a i chlSab2.chr21 N 0 C 0 s manLeu1.NW_012105809v1 1162825 1 - 1799296 a i manLeu1.NW_012105809v1 N 0 C 0 s colAng1.NW_012115910v1 1745471 1 + 6934359 a i colAng1.NW_012115910v1 N 0 C 0 s canFam3.chr18 51754819 1 - 55844845 a i canFam3.chr18 C 0 C 0 e macFas5.chr3 67294060 0 + 192294377 C a score=334023.000000 s hg38.chr22_KI270732v1_random 7946 54 + 41543 aaaataagaaggatagag-taataatctaacacgttgaaatctaagaaggagaaa s panTro5.chr2B 114753734 54 - 133216015 aaaatataaagcatacag-taataatctaacacgttgaaatctaagaaggagaaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82695995 54 - 135337776 aaaatatgaaggatagag-taataatctaacacgttgaaatctaagaaggagaaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 122499 54 + 150013 aaaatatgaaggatagag-taataatctaacacgttgaaatctaagaaggagaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40156266 54 - 81552678 aaaatataaaggatacag-taataatctaacacgttgaaatctaagaaggagaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133464381 54 - 185818997 aaaatataaaggatacaa-taataatctaacacattgaaatctgaggaggagaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67294060 54 + 192294377 aaaatataaaggatacaa-taataatctaacacattgaaatctgaggaggagaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2775975 54 + 3123512 aaaatataaaggatacaa-taataatctaacacattgaaatctgaggaggagaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2496564 54 + 10077455 aaaatataaaggatacaa-taataatctaacacattgaaatctgaggaggagaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5702611 51 + 127223203 aaaatataaaggatacag-taataatctaacacgttgaaatct---gaggagaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1162826 54 - 1799296 aaaatataaaggatacaa-taataatctaacacattgaaatctgaggaggagaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1745472 54 + 6934359 aaaatataaaggatacac-taataatctaacacgttgaaatctggggaggagaaa i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12735671 48 + 14340318 aaaacatgaaaaatacag-------tttgacactttggaaaccaagcaggagaag i otoGar3.GL873564 N 0 C 0 s canFam3.chr18 51754820 52 - 55844845 --aacat-aaggatatagttagcaatctaatgtattagtatcccaggagaagaaa i canFam3.chr18 C 0 C 0 a score=39074.000000 s hg38.chr22_KI270732v1_random 8000 8 + 41543 acagcttc s panTro5.chr2B 114753788 8 - 133216015 acagctgg i panTro5.chr2B C 0 C 0 s panPan2.chr12 82696049 8 - 135337776 acagcttg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 122553 8 + 150013 acagcttg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40156320 8 - 81552678 acagctgg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133464435 8 - 185818997 acagctgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67294114 8 + 192294377 acagctgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2776029 8 + 3123512 acagctgg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2496618 8 + 10077455 acagctgg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5702662 8 + 127223203 acagctgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1162880 8 - 1799296 acagctgg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1745526 8 + 6934359 acagctga i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 723192 8 - 18371965 acagctGG i saiBol1.JH378145 N 0 C 0 s otoGar3.GL873564 12735719 1 + 14340318 --a----- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51754872 4 - 55844845 atag---- i canFam3.chr18 C 0 C 0 a score=3509057.000000 s hg38.chr22_KI270732v1_random 8008 396 + 41543 tctgaacagcattttaagtgacaatgttagaggttttatcaaaattgaccaataatattaaaccacaggttcaggaggcttttcaaagcaaaggaaaacacacacagagg-----------------------------ac--acatctagaaacataatgggacaatttctgaaaagtaaaagaaaa-atgtaaagagcacttgataaaaaaaattggggtaac-tac-aaagagaaagagttgactgata--acaactttctcaaatgaaacaacgaaagccaacaagtgaggtattgatatctttcaagtcctgaaataaaataagtgctgacctagaactgtctatttggtggacatatccatcaaaagcaaagatacaataaagaatttctccc-aagcagtcccacaggaaaagaaatactgaagat s panTro5.chr2B 114753796 393 - 133216015 tctgaacagcattttaagtggcaatgttagaggttttatcaaaattgaccaataatattaatccacaggttcaggaggctttgcaaaccaaatgaaaacacacagagagg-----------------------------ac--acacctagaaacataatgggacaatttctgaaaagtaaaagaaaa-atgtcaaaagcacttgataaaaaa--ttgggctaac-tat-aaagagaaagagttgactgata--acaaccttctcaaatgaa-caatgaaagccaacaagtgaggtattgatacctttcaagtcctgaaataaaataagtgccgacctagaactgtctacttggtggacatatccatcataagcaaagatacaataaagaatttatccc-aagcagacccacaggataagaaatactaaagat i panTro5.chr2B C 0 C 0 s panPan2.chr12 82696057 395 - 135337776 tctgaacagcattttaagtggcaatgtgagaggttttatcaaaattgaccaatgatattaaatgacagattcaggaggcttttcaaagcaaaggaaaacacacacagagg-----------------------------ac--acatctagaaacataatgggacaatttctgaaaagtaaaagataa-atgtaaagagcacttgataaaaaa-gttgggctaac-tac-aaagagaaagagttgaatgata--acaactttctcaaatgaaacaacgaaagccaacaagtgaggtattgatatctttcaagtcctgaaataaaataagtgctgaactagaactgtctacttggtggacatatccatcaaaagccaagatacaataaataatttctccc-aagcagacccacaggaaaagaaatagtaaagat i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 122561 395 + 150013 tctgaacagcattttaagtggcaatgttagaggttttatcaaaattgaccaataatattaaaccacaggttcaggaggcttttcaaagcaaaggaaaacacacacagagg-----------------------------ac--acatctagaaacataatgggacaatttctgaaaagtaaaagaaaa-atgtaaagagcacttgataaaaaa-attgggctaac-tac-aaagagaaagagttgactgata--acaactttctcaaatgaaacaatgaaagccaacaagtgaggtactgatatctttcaagtcctgaaataaaataagtgctgacctagaactgtctacttggtggacatatccatcaaaagcaaagatacaataaagaatttctccc-aagcagacccacaggaaaagaaatactaaagat i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40156328 395 - 81552678 tctgaacagcattttaagtggcaattttagaggttttatcaaaattgaccaataatattaaaccacaggttcaagaggctttgcaaaccaaaggaaaacacacacagagg-----------------------------ac--acacctagaaaaataatgggacaatttctgaaaagtaaaagaaaa-atgtaaagagcacttggtaaaata-attgagctaac-tac-aaggagaaagagttgactgata--acaaccttctcaaatgaatcaatgaaagccaacaagtgaggtattgatatctttcaagtcctgaaataaagtaaatgccgacctagaactgtctacttggtgaacacatccatcacaagccaagatacaataaggaatttctccc-aagcagacccacaggaaaggaaatactaaagat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133464443 393 - 185818997 tctgaacagcattttaagtggcagtgttagaggttttatcaaaattgaccaatgatattaaaccacaggttcaggaggtttagaaaaccaaaggaaaacactcacagagg-----------------------------ac--acacctggaaacataatgggaaaacatctgaaaactaaaagaaaa-atgtaaagagcacttgacgaaaaa-attgggttaac-tgc-aaagagaaagagttgactgaca--acaactttctcaaatgaaacaatgaaagccaacaagtgaggtattgatatctttcaagtcctgaaataaaataagtgccgacctagaactgtctactttgtggacatacccatcaaaagcaaagacacaataaagaatttctccc-aagcagacccacaggaaaagaaatactaa--gt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67294122 393 + 192294377 tctgaacagcattttaagtggcagtgttagaggttttatcaaaattgaccaatgatattaaaccacaggttcaggaggtttagaaaaccaaaggaaaacacacacagagg-----------------------------ac--acacctggaaacataatgggaaaacatctgaaaactaaaagaaaa-atgtaaagagcacttgacgaaaaa-attgggttaac-tgc-aaagagaaagagttgactgaca--acaactttctcaaatgaaacaatgaaagccaacaagtgaggtattggtatctttcaagtcctgaaataaaataagtgccgacctagaactgtctacttcgtggacatacccatcaaaagcaaagacacaataaagaatttctccc-aagcagacccacaggaaaagaaatactaa--gt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2776037 393 + 3123512 tctggacagcattttaagtggcagtgttagaggttttatcaaaattgaccaatgatattaaaccacaggttcaggaggtttagaaaaccaaaggaaaacacacacagagg-----------------------------ac--acacctggaaacataatgggaaaacatctgaaaactaaaagaaaa-atgtaaagagcacttgacgaaaaa-attgggttaac-tgc-aaagagaaagagttgacggaca--acaactttctcaaatgaaacaatgaaagccaacaagtgaggtattgatatctttcaagtcctgaaataaaataagtgccgacctagaactgtctacttcgtggacatacccatcaaaagcaaagacacaataaagaatttctccc-aagcagacccacaggaaaagaaatactaa--gt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2496626 393 + 10077455 tctgaacagcattttaagtggcagtgttagaggttttatcaaaattgaccaatgatattaaaccacaggttcaggaggtttagaaaaccaaaggaaaacacacacagagg-----------------------------ac--acacctagaaacataatgggaaaacatctgaaaactaaaagaaaa-atgtaaagagcacttgacgaaaaa-attggattaac-tgc-aaagagaaagagttgactgaca--acaactttctcaaatgaaacaatgaaagccaacaagtgagatattgatatctttcaagtcctgaaataaaataagtgccgacctagaactgtctacttcgtggacatacccatcaaaagcaaagacacaataaagaatttctccc-aagcagacccacaggaaaagaaatactaa--gt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5702670 393 + 127223203 tctgaacagcattttaagtggcagtgttagaggttttatcaaaattggccaatgatattaaaccacaggtccaggaggtttagaaaaccaaaggaaaacacacacagagg-----------------------------ac--acacctagaaacataatgggaaaacttctgaaaagtaaaagaaaa-atgtaaagagcacttgacgaaaaa-attgggttaac-tgc-aaagagaaagagttgactgaca--acaaccttctcaaatgaaacaatgaaagccagcaagtgaggtattgatatctttcaagtcctgaaacaaaataagtgccgacctagaactgtctacttcgtggacatacccatcaaaagcaaagacacaatagagaatttctccc-aagcagacccacaggaaaagaaatactaa--gt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1162888 391 - 1799296 tctgaacagcattttaagtggcagtgttagaggttttatcaaaattgaccaatgatattaaaccacaggttcaggaggtttagaaaaccaaaggaaaacacacacagagg-----------------------------ac--acacctagaaacataatgggaaaacatctgaaaactaaaagaaaa-atgtaa--agcacttgacgaaaaa-attgggttaac-tgc-aaagagaaagagttgactgaca--acaactttctcaaatgaaacaatgaaagccaacaagtgagatattgatatctttcaagtcctgaaataaaataagtgctgacctagaactgtctacttcgtggacatacccatcaaaagcaaagacacaataaagaatttctccc-aagcagacccacaggaaaagaaatactaa--gt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1745534 391 + 6934359 tctgaatagcattttaagtggcagtgttagaggttttatcaaaattgaccagtgatattaaaccacaggtccagaaggtttagaaaaccaaaggaaaacacacacagtgg-----------------------------ac--acacttagaaacataatgggaaaacttctgaaaagtaaaagaaaa-atggaaagagcacttgacgaaaaa-attgggttaac-tgc-aaagagaaagagttgactgaca--acagccttctcaaatgaaacaatgaaagccaacaagtgaggtattgatatctttcaagtcctgaaataaaataagtgccgacctagaactgtctacttcgtggacatacccatcaaaagcaaagacacaataaagaatttctccc-aagcagacccacaggaaaagaaatatt----gt i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 723200 394 - 18371965 TCTGaacagcattttaagtggcagtgttagagatttcaccaaaattcacgaatgatattaaaccacaggttcaggaggatttacaaagcaaagaaaaacatacgcagaga-----------------------------aaatacacctggaaatataatgacacaacttctgaaaagtaaaagaaaa-atgtaaagagcacttgtcaaaaa--aatgggctaat-tacgagagaaaaaga---gactgaca--gctaccttctcaaatgaaacaatgaaagccaacaaatgaggtatcgatatctttcaagtcctgaaataaagtaagtgccagcctggaactgtctacttggtggacatatccatcaaaagcaaagatacaataaagaatttgtcac-aagcagacccacaggaaaggaaatactaaagat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1383094 368 + 3566421 TCTGAATAGCattttaagtggcaatgttagagattttaccaaaattgatgaatgatattaaaccacaggttcaggaggatttgcaaagcaaaggaatacatacgcagaga-----------------------------aaatacacctagaaacataatgacataacttctgaaaggtaaaagaaaa-atgtaaagagtacttgacaaaaat-attgggctaat-tac-agagagaaaga---gactgaca--gctaccttctcaaatgaaacaatgaaagccaacaaatgaggtaccgatacccttcaagtcctgaaataaaacaagtgccaacctagaattctttatt--gtg------------------------acaataaagaatttgtcac-aagcagacccacaggaaaagaaatactaaagat i cebCap1.NW_016107540v1 N 0 C 0 s aotNan1.NW_018514471v1 1884913 390 - 9267652 TCTGaacagcattttaagtggcaatgttagagattttaccaaaattgacgaatgatattaaaccacaggttcaggaggatttgcaaagcaaaggaaaacatatgcagaga-----------------------------aa--acacctagaaac---atgacacaatttctgaaaggtaaaataaaa-atgtaaagagtacttgacaaaaaa-attgggctaat-tacaagagagaaaga---gactgaca--actatcttctcaagtgaaacaatgaaagccaacaaatgaggtattgatatctttcaagtcctgaattaaaataagtgccgacctagaactgtctacttggtggacatatccatcaaaagcagagatacaataaagaacttgtcac-aagcagactcacaggaaaggaaatactaaagat i aotNan1.NW_018514471v1 N 0 C 0 s otoGar3.GL873564 12735720 359 + 14340318 ----aac---------agtgggaatggcagaaacgtcgccaaaaccgagtgacaacgcgaagccagagactctggagggtttgcaagtcaaagaaaaataaacacagaga-----------------------------aaacacgcctgcaaacactgacgtgcagtcccggaaca-tgactgaaaa---ggaaagag----------ggaa-atttcgctgac-tct-gaggcagga-----ggcccaca--cccagcttctcaaacgaaaccgtgagcgccaacgag--------caataaccttgaagttctgaaatacagcaagtgccaacctgggctccaccacttggtggaaatatccctcaaaaacaaagacaaaatgaagggtttgtcacaaaacggactcacactaaaggagatactgaagat i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51754876 403 - 55844845 ----aac----tggtcagtggaaatggtagagattttaccaaaaatgaccaaggagatcaagccacaacttctggaacttctgcaaataaggggtaaatatttatatatatatatatatatatatatatatatatatatat--atacct-gaaacattatagtaaaacttctgaaaagtaaaagaaaatatgtaaagaacattt-ctgggaaa-atgaagctaacttat-aaagaaaaaagttaaatttacaagaaaaacttttcaaattaaacagtgaaagtcatcaagctctttattgatacttttaaagttctgaaataaaataaatgc----------ctttatacttggtaaaaatatccatcaaaagtaaaaacaaaat----aatttttcac-caacagac-cacagtaaaggaagtactaaagAT i canFam3.chr18 C 0 C 0 a score=8370704.000000 s hg38.chr22_KI270732v1_random 8404 845 + 41543 tattcttcagatagaagagccatgatccctgatgaaagtttgcagttagaagaacaa--tttttt---aatgaaagaaataaacatagagagaaatttaattggatatcgactgtataacaggatgctatctcataaagt-ttaaaatgtat---------------ct-tccatacaacggcagaagcat----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatattgtcaagtttttttt-------ttttttgcaaatagacaaatgtacca-attatattagaccctg--aat--tcaagaatga--------acgttgta-----TTAAACCAGGTAAAACATAACCAGACCAGA-TTTTT-TAAATGGACTCTCTTAAAGTTTTTATAATTTATATTCATATTTcacatatgttgaaagtaaataatggaaaa--gcatgcaatgcaaatattaaccaaaatatagctttagttgtacttatatTCACATTTTAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAACCTGTGCAGTTATAACTAGTATTATATTATGCTCTTGGCCTGATTACAGAAGGGAAAGGGGCGA--TCATACCAGACAATGGCAGAATGAAGCAACAAGGA--------------------GTAGA-GTTACAGAAcatgatgctgtaact------------ggaactggagttactcttttagag-ttaaagaatagtaaactgaacaaaatatatgaaac-atttttttgaagtactgaacatcaggcagcacaggactgtgctcagcaagagaagagaaGGAGCCAGAATGAGTCCTGCTTTATTCCCAGAT-TCTCCGTGACAGCAGT------------------AGAGAGGAATCACAGAGAGAGCAGA-CGTTGTCATTGCACTGAGGAACCAGA s panTro5.chr2B 114754189 840 - 133216015 tattcttcaggtagaagagctatgatccctgatgaaagtttgcagttagaagaacgc--ttttttt-taatgaaagaaataaacatagagagaaatttaattggatatccactgtataacagaatgctatctcctaaagt-ttaaaatgcat---------------CT-TCCATACAACAGCAGAAGCAT----------------------------------------------ATAAGT-----------------------------------------------------------TG----------TGAGTTGGATAAATTAATTTTAAAATATTGTCAAGTTTTTTTT-------------GCAAATAGACAAATGTGCCA-ATTATATTAAACCCTG--AAT--TCAAGAATGC--------ACGTTGTA-----ATAAACCAGTTAAAACATAATCAGACCAGA-TTTTT-TAAATGGACTCTCTTAAAGTTTTTATAATTTATATTTATATTTCACATATTTTGAAACTAAATAATGGAAAA--GCATGCAATGCAAATATTAAACAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAAGCTGTGCAGTTATAACTAGTATTATGTTATGCTCTTGGCCTGATTACAGAAGGGAAAGGGGCAA--TCATACCAGACAATGGCAGAATGAAGCAACAAGGA--------------------GTAGA-GTTACAGAAcatgatgctgtaact------------gggactggagttactcttttagag-ttaaagaatagtaaactggacaaaatatatgaaac--tttttttgaaatactgaacatcaggcagcacaggactgtgctctgcaagagaaaagaaGGAGCCAGAATGAGTCCTGCTTTATTCCCAGGT-TCTCCGTGACAGCAGT------------------AGAGAGGAATCCCAGAGAGAGCAGA-CATTGTCATTGCACTGAGGAACCAGA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82696452 834 - 135337776 tattcttcaggtagaagagccatgatccctgatgaaagtttgcagttagaagaacaa--tttttt---aatgaaagaaataaacat----agaaatttaattggatattgactgtataacagaatgctatctcataaag--ttaaaatgtat---------------ct-tccatgcaatggcagaagcat----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatattgtcaagtttttttt-------ttttttgcaaatag----atgtacca-attatattagaccctg--aat--tcaagaatgc--------acgttgta-----TTAAACCAGGTAAGCCATAACCAGACCAGA-TTTTT-TTAATGGA--CTCTTAAAGTTTTTATAATTTATATTCATATTTcacatatgttgaaagtaaataatggaaaa--gcatgcaatgcaaatgttaaccaaaatatagctttcgttgtacttatatTCACATTTTAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAACCTGTGCAGTTATAACAAGTATTATATTATGCTCTTGGCCTGATTACAGAAGGGAAAGGGGAGA--TCATACCAGACAATGGCAGAATGAAGCAACAAGGA--------------------GTAGA-GCTACAGAAcatgatgctgtaact------------gggactggggttacacttttagag-ttaaagaatagtaaactggacaaaatatatgaaac-atttttttgaagtactgaacatcaggcagcacatgactgtgctctgcaagagaagagaaggagccagaatgaggcctgctttattcccagat-tctccgtgacagcagt------------------agagaggaatcccagaaagagcaga-cattgtcattgcactgaggaaccaga i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 122956 840 + 150013 tattcttcaggtagaagagccatgatccctgatgaaagtttgcagttagaagaacaa--tttttt--taatgaaagaaataaacatagagagaaatttaattggatatcgactgtataacagaatgctatctcataaagt-ttaaaatgtat---------------ct-tccatacaacggcagaagcat----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatattgtcaagtttttttt-----------ttgcaaatagacaaatgtacca-attatattagaccctg--aat--tcaagaatgc--------acgttgta-----TTAAACCAGGTAAAACATAACCAGA-CAGA-TTTTT-TAAATGGACTCTCTTAAAGTTTTTATAATTTATATTCATATTTcacatatgttgaaagtaaataatggaaaa--gcatgcaatgcaaatattaaccaaaatatagctttagttgtacttatatTCACATTTTAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAACGGAGGCAAACTGTGCAGTTATAACTAGTATTATATTATGCTCTTGGCCTGATTACAGAAGGGAAAGGGGCGA--TCATACCAGACAATGGCAGAATGAAGCAACAAGGA--------------------GTAGA-GTTACAGAAcatgatgctgtaact------------gggactggagttactcttttagag-ttaaagaatagtaaactggacaaaatatatgaaac--tttttttgaagtactgaacatcaggcagcacaggactgtgctctgcaagagaagagaaGGAGCCAGAATGAGTCCTGCTTTATTCCCAGAT-TCTCCGTGACAGCAGT------------------AGAGAGGAATCCCAGAGAGAGCAGA-CATTGTCATTGCACTGAGGAACCAGA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40156723 837 - 81552678 tactcttcaggtcgaagagccatgatccctgatgaaagtttgcagttagaagaacga--tttttt--taatgaaagaaataaacatggagagaaatttatttggatatcgactatataacagaatgctatctcataaagt-ttaaaatgtat---------------ct-tccatacaacaacagaagcat----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaacatcgtcaagtacttttt-----------ttgcaaatagagaaatgtacca-attatattagaccctg--gag--tcaagaatac--------acgttgta-----ataaaccagttaaaacataataagaCCACATTTTTT-TAAATGGACTCTCTTAAAGTTTTTATAATTTATATTTATATTTcacatatgttgaaagtaaataatggaaaa--gcatgcaatgcaaatattaaccaaaatatagctttagctgtacttatatTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGA-TTTTTTACACAACGGAAGCAAGCTGTGCAGTTATTATTACTATTATATTATGCTCTTGGCCTGATTACAGAAGGGAAAGGGGCGA--TCATACCAGACAATGGCTGAATGAAGCAACAAGGA--------------------GTAGA-GTTACAGAAcatgatgctgtaact------------gggactggagttactcttttagag-ttaaagaatagtaaactggacaaaatatatgaaac-atttttttgaagtactgaacatcaggcagcactggacagtgctctgcaag-----agaaggagccaggatgagtcctGCTTTATTCCCAGGT-TCTCCGTGACAGCAGT------------------AGAGAGGAATCCCAGAGAGAGCAGA-CATCGTCATTGCATTGAGGAATCAGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133464836 845 - 185818997 tattcttcaggtagaatagtaatgatccctgatgaaagtttgcagttagaagaatga--tttttt--taatgaaagaaataaacatggagagaaatttaattggatatcgactatataacagaatgctatctcataaagt-ttaaaatgttt---------------ct-tccatacaatagcagaagtaa----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatctagtcagatattattt---------ttttgcaaatagactaatgtacca-attatattagaccctg--aag--tcaagaatgc--------acattgta-----atAAACCGGTTAAAACATAATCAGACCAGA-TTTTTAAAAATGGACTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATGTTGAAAGTAAATAATGGAAAA--GCATGCAATGCAAATATTATCCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTTTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGA--TCATACGAGACAGTGGCAGAATGAAGAAACAAAGA--------------------GTAGA-GTTACAGAACATGATGCTTtaact------------ggtgctggagttactcttttagat-ttaaagaatagtaaactggaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggt-tctccgtgacagcagt------------------agagaggtatcccagagagagcagagcattgtcattgcattgaggaaccaga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67294515 845 + 192294377 tattcttcaggtagaatagtaatgatccctgatgaaagtttgcagttagaagaatga--tttttt--taatgaaagaaataaacatggagagaaatttaattggatatcgactatataacagaatgctatctcataaagt-ttaaaatgttt---------------ct-tccatacaatagcagaagtaa----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatctagtcagatattattt---------ttttgcaaatagactaatgtacca-attatattagaccctg--aag--tcaagaatgc--------acattgta-----atAAACCGGTTAAAACATAATCAGACCAGA-TTTTTAAAAATGGACTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATGTTGAAAGTAAATAATGGAAAA--GCATGCAATGCAAATATTATTCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGA--TCATACGAGACAGTGGCAGAATGAAGAAACAAAGA--------------------GTAGA-GTTACAGAACATGATGTTTtaact------------ggtgctggagttactcttttagat-ttaaagaatagtaaactggaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggt-tctccgtgacagcagt------------------agagaggtatcccagagagagcagagcattgtcattgcattgaggaaccaga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2776430 845 + 3123512 tattcttcaggtagaatagtaatgatccctgatgaaagtttgcagttagaagaatga--tttttt--taatgaaagaaataaacatggagagaaatttaattggatatcgactatataacagaatgctatctcataaagt-ttaaaatgttt---------------ct-tccatacaatagcagaagtaa----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatctagtcagatattattt---------ttttgcaaatagactaatgtacca-attatattagaccctg--aag--tcaagaatgc--------acattgta-----atAAACCGGTTAAAACATAATCAGACCAGA-TTTTTAAAAATGGACTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATGTTGAAAGTAAATAATGGAAAA--GCATGCAATGCAAATATTATCCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGA--TCATACGAGACAGTGGCAGAATGAAGAAACAAAGA--------------------GTAGA-GTTACAGAACATGATGCTTtaact------------ggtgctggagttactcttttagat-ttaaagaatagtaaactggaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctGCTTTCTTCCCAGGT-TCTCCGTGACAGCAGT------------------AGAGAGGTATCCCAGAGAGAGCAGAGCATTGTCATTGCATTGAGGAACCAGA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2497019 825 + 10077455 tattcttcaggtagaatagtaatgatccctgatgaaagtttgcagttagaagaatga--tttttt--taatgaaagaaataaacatggagagaaatttaattggatatcgactatgtaacagaatgctatctcataaagt-tgaaaatgttt---------------ct-tccatacaatagcagaagtaa----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatctagtcagat-tttttt---------ttttgcaaatagactaatgtacga-attatattagaccctg--aag--tcaagaatgc--------acattgta-----atAAACCGGTTAAAACATAATCAGACCAGA-TTTTTAAAAATGGACTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATGTTGAAAGTAAATAATGGAAAA--GCATGCAATGCAAATATTATCCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGA--TCATATGAGACAGTGGCAGAATGAAGAAACAAGGA--------------------GTAGA-ATTACAGAACATGATGCTTTAACT------------GGGGC--------------------TTAAAGAATAGTAAACTGgaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcataggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggt-tctccgtgacagcagt------------------agagaggtatcccagagagagcagagcattgtcattacattgaggaaccaga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5703063 851 + 127223203 tattctttaggtagaatagtaacgatccctgatgaaagtttgcagttagaagaacgatttttttt--taatgaaagaaataaacatggagaaaaatttaattggatattgactatataacagaatgctatctcataaagt-ttaaaatgttt---------------ct-tccatacaatagcagaagcaa----------------------------------------------aaaagt-----------------------------------------------------------tg----------tgagttggatcaattaattttaaaatcttgtcagatattattt---------ttttaaaaatagactaatgtacca-attatattagaccctc--aag--tcaagaatgc--------acattgta-----atAAACCGGTTAAAACATAATCAGACCAGA-TTTTAAAAAATGAACTCTCTTAAAGATTTTGTAATTTATATTTATATTTcacatatgttgaaagtaaataatggaaaa--gcatgcaatgcaaatattaaccaaaatatagctttagttatacttatatTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGCTGTGCAGCTATAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGTGA--TCATACAAGACAGTGGCAGAATGAAGAAACAAGGA--------------------GTAGA-GTTACAGAACATGATGCTTtaact------------ggggctggagttactcttttagat-ttaaagaatagtaaactggaaacaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggt-tctccgtgacagcagtag--------------agagagaggtatcccagagagagcagagcattgttattgcattgaggaaccaga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1163279 845 - 1799296 tattcttcaggtagaatagtaatgatccctgatgaaagtttgcagttagaagaatga--tttttt--taatgaaagaaataaacatggagagaaatttaattggatattgactatataacagaatactatctcataaagt-ttaaaatgttt---------------ct-tccatacaatagcagaagtaa----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatctagtcagatattatat---------ttttgcaaatagactaatgtacca-attatattagaccctg--aag--tcaagaatgc--------acattgta-----atAAACCGGTTAAAACATAATCAGACCAGA-TTTTTAAAAATGGATTCTCTTAAAGATTGTGTAATTTATATTTATATTTCACATATATTGAAAGTAAATAATGGAAAA--GCATGCAATGCAAATATTATCCAAAATATAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACTGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAACTGTGCAGCTGTAACTGTTAATATATTATGCTCTTGACCTGATTACAGAAGGGAAAGGGGCGA--TCATACGAGACAGTGGCAGAATGAAGACACAAGGA--------------------GTAGA-GTTACAGAACATGATGCTTtaact------------ggggctggagttactcttttagat-ttaaagaatagtaaactggaaaaaatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggt-tctccgtgacagcagt------------------agagaggtatcccagagagagcagagcattgtcattgcattgaggaaccaga i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1745925 847 + 6934359 tattcttcaggtagaatagtaatgatccctgatgaaagtttgcagttagaagaacgatttttttt--taatgaaagaaataaacatggagagaaatttaattggatatcgactatataacagaatgctatctcataaagt-ttaaaatgttt---------------ct-tccatacaatagcagaagcaa----------------------------------------------ataagt-----------------------------------------------------------tg----------tgagttggataaattaattttaaaatcttgtcagatattattt---------ttttgcaaatagactaatgtacca-attatattagaccctg--aag--tcaagaatgc--------acattgta-----atAAACCAGCTAAAACATAATCAGACCAGA-TTTTTAAAAATGGACTCTCTTAAAGATTTTGTAATTTATGTTTATATTTCACATATGTTGAAAGTAAATAATGGAAAA--GCATGCAGCGCAAATATTAACCAAAATGTAGCTTTAGTTGTACTTATATTCACATTTAAAAAGTTGGACACAGTTAAGTCTCAGTGATTTTTTTACACAAAGGAGGCAAGTTGTGCAGCTATAACTGTTAATATATTATGCTGTTGACCTGATTACAGAAGGGAAAGGGGCGA--TCATACGAGACAGTGTCAGAATGAAGAAACAAGGA--------------------GTAGA-GTTACAGAACGTGATGCTTtaact------------ggggctggagttactcttttagat-ttaaagaatagtaaactggaaaacatatatgaaac--attttttgaagtactgaacatcaggcagcacaggactgtgttctgcaagagaagagaaagagccagaatgagtcctgctttcttcccaggt-tcaccgtgacagcagt------------------agagaggtatcccagagagagcagagcattgtcattgcattgaggaaccaga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108105842 928 - 128169293 tatTcttcaagcataagagcaatgatccctgatgaaaattttcagttagaataagaa--tttcttt-taatgaaagaaataaacatggagagaaatttaaatggatatcgactgtataaTGGAATGCTATCTCATAAAGT-TTAAAATGTAT---------------CT-TCCATACAATAGCAGTAACAAATAGGTTGTCCACCCTCAACTGATagtctcctgagtagctgggactataggtacacaccaccacacccggctattttttttttttctttttggtaataagaggttttgccatg----------tGAGTGAGataaattaattttaaaatattGTCAGGTATTATAT--------TTTTTGCAGATAGACtaatgtacca-attatattagaccctg--aag--tcaagaatgc--------acattgta-----atAAACCAGTTAAAAGATAATCAGACCAGA-TTTTTAAAAATTAACTCTCTTAAAGATTCTATAATTTATATTTATATTTcacatgggtttaaagtaaataatggaaat--gcatacaatgcaaacattaaccaaaatatagctttagttgtacctatattcacatTTTAA---------------AAGTTTCAGTGATTCTTTTACACAATAGAGTCAAGCTGTTCAGCTATAACTAGTATTATATTATGCTCT---CCTGATTACAGAAGGG-AAAGGGTGA--TCACACAAGACAG------AATGAAGAAACAAAGA--------------------GAAGA-GTTACAGAAcatgatgctgtaact------------gggactggagttactctttaagat-ttaaagaatagtaaactggacaaaatatattaaac-aaatttttaaagtactgaacatcaggcagcacaggactgtgctctgcaagagaagagaaaaagccagaatgagtcctgctttcttcccaggt-tccccatggaagtagt------------------agagaggaatcccagagagagcatggcattgtcattgtattgaggaaacaga i calJac3.chr8 N 0 C 0 s saiBol1.JH378145 723594 815 - 18371965 tattcttcaggcataagaacaatgatccctcatgaaaattttcagttag---aagaa--ttttttt-aaatgaaaaaaataaacatagagagaaatttaattggatatcgactgtataacagaatgctatttcataaagt-ttaaaatgtac---------------ct-tgcgtacaacagcagtaac------------------------------------------------acaggt-----------------------------------------------------------tg----------tgagtgaaataaattaattttaaagtattgtcaggtattatat--------tttttgcaaatagacaaatgtacca-attatattagaccctg--aag--tcaagaatac--------acattgta-----atcaaccagttaaaagaTAATTGGACCAGA-TTTTCAAAAATTAACTCTCTTAAAGATTTTATA------ATTTCTATTTcacagaggttgaaagtaaataatggaaat--gcatacaatgcaaacattaaccaaaatatagctttagttgtacctatattcacatTTTAA---------------AAGTCTTAGTGATTTTTTTACACAATGGAGTCAAGCTGTGCAGCCATAACTAGTATTATATTATGCTCTCTGCCTGATTACAGACGGG-AAAGGACGA--TCACACGAGACGG------AATGAAGAAACAAAGA--------------------GAAGA-GTTACAGAAcatgatgctgtaact------------gagactggagttactcttttagac-ttaaagaatagtaaactggacaaaatatattaaac-aaatttttaaagtaccgaacatcaggcagcacaggactgtgctctgcaggagaagagaaaaagccagaatgagtcctgctttcttcccgggt-tctccctgacagtagt------------------agagaggaatcccagagagggcatggcattgtcattgtattgaggaaacaga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1383462 819 + 3566421 tattcttcaggcataagagcaatgatccctgatgaaaattttcagttagaagaagaa--ttttttt-taatgaaagaaataaacatggagagaaatttaattggatatcgactgtataacagaatgctatctcataaagt-ttaaaatgtat---------------ct-tccatacaatagcagtaacaa----------------------------------------------ataggt-----------------------------------------------------------tg----------tgagtgagataaattaattttaaaatattgtcaggtattatat--------tttttgcaaatagactaatgtacca-attacatcagaccctg--aag--tcaagcatgc--------acattgta-----atAAACCAGTTACAAGATAATCAGACCAGA-TTTTTTTAAATTAA--CTCTTAAAGATTTTATAATTTCTATTTATATTTcacataggttgaaagtaaataatggaaat--acatacaatgtaaacattaaccaaaatatagctttagttgtacctatattcacatTTTAC---------------AAGTCTCAGTGATTTTTTTACACAATGGAGTCAAGCTGTGCAGCTGTAGCTAGTATTATATTATGCTCTCTGCCTGATTACAGAAGGGAAAAGGGCGA--TCACACAAGACAG-------TTGAAGAAACA-------------------------AAGA-GTTACAGAAcacgatgctgtagct------------gggactggagttactgttttagat-ttaaagaatagtaaactggacaaaatatattaaac-aaatttttaaagtactgaacatcaggcagcacaggactgtgctctgcaagagaagagaaaaagccagaatgagtcctgctttcttcccaggt-tctccatgagagtagt------------------agagaggattcccagagagagcatgtcattgtcattgtattgaggaaacaga i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1885303 827 - 9267652 tattcttcaggcataagagcaacgttccctgatgaaaatttccagttagaggaagaa--ttttttt-taatgaaagaaattaacatggagagaaatttaattggatatcgactgtataacagaatgctacctcataaagt-ttaaaatgtat---------------ct-tccatacaatagcagtaacaa----------------------------------------------ataggt-----------------------------------------------------------tg----------tgagtgagataaattaattttaaaatattgtcaggtattatat--------tttttgcaaatagactaatgtacca-attatattagaccctg--aag--tcaagaatgc--------acattgta-----ataaaccagctaaaagaTAATCAGACCAGA-TTTTTTAAAATTGACTCTCTTAAAGATTTTGTAATTTATATTTATATTTcacataggttgaaagtaaataatgaaaat--gcatacaatgcaaacattaaccaaaatatagctttagttgtacctatattcacatTTTAA---------------AAGTCTCAGTGATTTTTTTACACAATGGAGTCAAGCTGTGCAGCTATAACTAGTATTATATTATGCTCTCTGCCTGATTACAGAAAGGAAAGGGGCGA--TCACACAAGACAG------AATGAAGAAACAAAGA--------------------GAAGA-GTTACAGAAcatgatgctgtaact------------gggcctggagttactcttttagat-ttaaagaatagtaaactagacaaaatatattaaac-aaatttttaaagtactgaacatcaggcagcacaggactctgctctgcaagagaagagaaaaagccagaatgagtcctgctttcttcccaggt-tctccatgagagTAGT------------------AGAGAGGAATCCCAGAGACAGCATGGCATTGCCATTGTATTGAGGAAACAGA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12736079 815 + 14340318 tgttgtctagggagaagggcaatgatgcctgattgaagttttcaggtgtaagaacgt--tttctttcaaataaaggatatgaatgtgaggggacatttaaatggacattgattacataacacagtgccacctcatgaagc-ttaaaatgcat---------------ctaaaaatacaacagcggtaacca----------------------------------------------agaggt-----------------------------------------------------------tg----------agaatgggacatattgatttgaaaatattaccaaatattggttttttttttttcctgcaaacagactaac-tacca-attttatcagatcctgaaaag--tccagaatgA--------ACAACATA-----ATAAAC--------------------CAGA-TTTCTACTAATGGACTCCCTTAAAGGTTTTATAATTTATATTTGTATCTTATGTATATTAAAAGTAAATTATGGGAAA--GCACTAAATGCAAACATTGACCAAAACAGAGCTTCGGTTGCA-GTATATTAACATTTCAAAGGTTAGACACAGTCTAGGCTCAGTCA-TGTCTCACACAGCAGGAGC-CGCTGTGCCGCT-------TTGCTGCGTGATGCTCTTTGGCTGAGTACATAAAAT-AACGATAAA--ACGCAGGACATATCTGCAGGACGAATCAAACAGGA--------------------ACAGA-GTC-CGGAATGTgatgtagtaact------------gggagtggagtgactcttt-agag-caagaatatagaaaatcagacaaaatacacgaaac-aagtgtttgacgtattga------------------------tctctgagagcagaaaaagggccaagatgagtcctacttccct-ccagat-gccatatgggcactatca----accaaggtctagagcaaagaatcgcagagagaccagggcaatgtcactgcattgagaacacaga i otoGar3.GL873564 C 0 I 258 s canFam3.chr18 51755279 889 - 55844845 -----------TAAAAAGTTGAAG----CTGATGAAAGTTGATAGTTATAGA---GA--TTTTTT--TAAAGTAAGAAATA-----TGGGAGAAATTTAATTGAATATCAATTGTATAGCACAATAC-ATCTCATGAAATAATATAATACATTGAATACACTAAATATT-TGAGCACTGTATCAAACACAC----------------------------------------------AAAGGA-----------------------------------------------------------TAGCTTATAGTTTGAGTAAGATACATTGATATAAAAATATTGTAAAGTATTACTT----------TTTACAAATAGACCAAAGTACCATTTTATATTATACATTG--GAGAATTGAGAATGCAATTGAGAATGTTGTATTTCTATTAACTTATTAAAATATTCTGATACTGGA-TTTCCTTTGAAAGAACACCTTAAAGATTTTAGATTTTACATGTATGTTTTGCATATGTTGAAAGTAAATGGTAAAAAAATGTGTGCAATGCAAATATGAACCAAAATACAGCTTTCAATGCATCTATATTAACA-TAAGAATGTTAGACACAGTTATGTCTCAGTTA-TTTCCTGTACAATGGAGGCATG-TGTGTAG------------------------CTTTGGCTGATTACATAACAGAAAAGGAAAAGTTTACATGACATATTGACAGAATGAGGAGACAAGTATACATATTTATATATTACATACAGATATAACGGAATATTATTCAGTCATTTAAAAagttacagagattggatttattctttcaaagaaaaaaggaaagaaaactggccaaaatatatgggacaaatattttgaagtattacatatcaagcaccataggactgtagtccctgagagcagggcaagaaccaagatgagtcccaCTTTCTCCCTAGGCATCTATATGGGAGCAATATTGTAACTAACTCTTAGGGAGAGAAATCCCAGAAAGACCAGG-----ATCACTGACATGAGAAAACAGA i canFam3.chr18 C 0 C 0 a score=2698442.000000 s hg38.chr22_KI270732v1_random 9249 259 + 41543 -T-AAAAATCAAAAAA----------------------------GG-TTAAGCAGCTGGAATGTGTAG-----Tagaagagaacgtt-tacagaaa-aaggaaccaagaatcagcctaaggattctctcaagt---------ccctaagccaaatgtacataggatgaaattctaaggagctcagcaaaggac-actaccagggagttggaagaagaacacttctctggaatcacatgacaggaagacacgttagctctgaccagccagagaagggaatcccctctgcacctccaggatattcagta s panTro5.chr2B 114755029 254 - 133216015 -T-AAAAACCAAAA------------------------------TG-TTAAGCAGCTGGAATGTGTAG-----TAGAAGAGAATGTT-TACAGAAA-AAGGAACCAATAATCAGCCTAAGGTTTCTCCCAAGT---------CCCTAAGCCAAATGTACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGAC-TCTACCAGGGAGTTGGAAGAA---CACTTCcctggcatcacatgacaggaagacatgttagttttgaccagccagagaagggaatcccctctgtacctccaggatattcagta i panTro5.chr2B C 0 C 0 s panPan2.chr12 82697286 259 - 135337776 -t-aaaaatcaaaaaa----------------------------gg-ttaagCAGCTGTAATGTGTAG-----TAGAAGAGAACGTT-TACAGAAA-AAGGAACCAAGAATCAGCCTAAGGATTCTCCCAAGT---------CCCTAAGCCAAATGTACATAGGATGAAATTCTAAGGAGCTCAGCACAGGAC-TGCACCAGGGACTTGGAAGAAGAACATTTCCCTGGCATCACATGACAGGAAGACACGTTAGCTCTGACGAGCCAAAGAAGGGAATCACCTCTGTACCTCCAGGATATTCAGTA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 123796 259 + 150013 -T-AAAAATCAAAAAA----------------------------GG-TTAAGCAGCTGGAATGTGTAG-----TAGAAGAGAACGTT-TACAGAAA-AAGGAACCAAGAATCAGCCTAAGGATTCTCCCAAGT---------CCCTAAGCCAAATGTACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGAC-TCTACCAGGGAGTTGGAAGAAGAACACTTCCCTGGCATCACATGACAGGAAGACACGTTAGCTCTGACAAGCCAGAGAAGGGAATCCCCTCTGTACCTCCAGGATATTCAGTA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40157560 256 - 81552678 -T-AAAAATCAAAAAA----------------------------GG-TTAAGCAGCTGGAATGTGTAG-----TAGAAGAGAACGTT-TACAGTAA-AAGGAACCAAGAATCAGCATAAGGTTTCTCCCAAGT---------CCCTAAGCCAAATGTACGTAGGATGAAATTCTAAGGAGCTCAGCAAAGGAC-TCTACCagggagttggaagaa---cacttccctggcatcacatgacaggaagacatgttagctctgaccagccagagaagggaatcccctctgtacatccaggatattcagta i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133465681 260 - 185818997 -t-aaaaatcaaaaaa----------------------------gt-ttaagcagctggaatttgtag-----TAGAAGAGAACGTTATATAGAAA-AATGAACCAGGAATCAACATAAGGTTTCTGCCAAGT---------CCCCAAGCCAAATATACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGAC-TCTACCAGGGAGTTGGAAGAAgaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaaggaaatcccctctgaacatccaagatattcagta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295360 260 + 192294377 -t-aaaaatcaaaaaa----------------------------gt-ttaagcagctggaatttgtag-----tagaagagaacgttatatagaaa-aatgaaccaggaatcaacataaggtttctgccaagt---------ccccaagccaaatatacataggatgaaattctaaggatctcagcaaaggac-tctaccagggagttggaagaagaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaaggaaatcccctctgaacatccaagatattcagta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777275 260 + 3123512 -T-AAAAATCAAAAAA----------------------------GT-TTAAGCAGCTGGAATTTGTAG-----TAGAAGAGAACGTTATATAGAAA-AATGAACCAGGAATCAACATAAGGTTTCTGCCAAGT---------CCCCAAGCCAAATATACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGAC-TCTACCAGGGAGTTGGAAGAAgaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaaggaaatcccctctgaacatccaagatattcagta i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2497844 260 + 10077455 -t-aaaaatcaaaaaa----------------------------gt-ttaagcagctggaatttgtag-----TAGAAGAGAACGTTATATAGAAA-AATGAACCAGGAATCAACATAAGGTATCTGCCAAGT---------CCCTAAGCCAAATATACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGAC-TCTACCAGGGAGTTGGAAGAAgaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaaggaaatccgttctgaacatccaagatattcagta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5703914 260 + 127223203 -t-aaaaatcaaaaaa----------------------------gt-ttaagcagctggaatttgtag-----tagaagagaacattatatagaaa-aatgaaccaggaatcaacataaggtttctgccaagt---------ccttaagccaaatatacataggatgaaattctaaggagctcagcaaaggac-tctaccagggagttggaagaagaacacttccttggcatcacacgacaggaagacatactagctctgaccagccagagaagggaatcccctctgaacatccaagatattcagta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164124 260 - 1799296 -t-aaaaatcaaaaaa----------------------------gt-ttaagaagctggaatttgtag-----TAGAAGAGAACGTTATATAGAAA-AATGAATCAGGAATCAACATAAGGTTTCTGCCAAGT---------CCCTAAGCCAAATATACATAGGATGAAATTCTAAGGAGCTCAGCAAAGGAC-TCTACCAGGGAGTTGGAAGAAGAACACTTCCTTGGCATCACATGACAGGAAGACATGTTAGCTCTGACCAGCCAGAGAAGGAAATCCCCTCTGAACATCCAAGATATTCAGTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1746772 260 + 6934359 -t-aaaaatcaaaaaa----------------------------gg-ttaagcagctggaatttgtag-----tagaagagaatgttatacagaaa-aatgaacgaggagtcagcataaggtttctcccaagt---------ccctaagccaaatatacataggatgaaattctaaggagctcagcaaaggac-tctaccagggagttggaagaagaacacttccttggcatcacatgacaggaagacatgttagctctgaccagccagagaagggaatcccctttgaacatccaagatattcaata i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108106770 259 - 128169293 -tcaaaaatcagtaaa----------------------------gg-ttaagcagctggagtttgtag-----tagaagagaaagttatgcagaaa-agggagccaggaatcagcataagatttctcccaagt---------ccctaagtcaaatgtacataggataaaattctaagaagctcagcaaaggac-tctacaagggagttggaagcagaacacatccctgacatcacacgacaggaagac--gttagctctgaccaaccagagagggcaatcccctctgaacatccaggatattcagta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 724409 259 - 18371965 -tcaaaaatcaaaaaa----------------------------gg-ttaagcagctggaatttgtag-----tagaagagaaaggtatatagaaa-agggagccaggtctcagcataagatttctcccaagt---------cgctaagccaaatgaacataggatgaaattctaaggagctcagcaaaggac-tctacaggggagctggaagcagaacacatccctggcatcacacgacaggaagat--gttagctctgcccaaccagagaggggaatcccctctgaacttccaggatattcagta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384281 258 + 3566421 -tcaaaagtcaaaaaa----------------------------ga--taagcagctggaatttgtag-----tagaagagaaagttatacagaaa-agggaggcaggaatcagcataaggtttctcccaagt---------ccataagccaaatgtacataggatgaaattctaaggagctcagcaaaggac-tctacaggggagttggaagcagaacacatccctggcgtcacatgacaggaagac--gttatctctgacaaaccagagaggggaatcccctctgaacatccaggatattcagta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886130 260 - 9267652 -TCACAAATCAAAAAA----------------------------AGTTTAAGCAGCTGGAATCTGTAG-----Tagaagagaaagttatacagaaa-agggagccaggaatcagcataaggtttctcccaagt---------ccctaagccaaatgtacataggatgaaattctaaggagctcagcaaaggac-tctacaagggagttggaagcagaacacatccctggcatcacacgacaggaagac--gttagctctgaccaaccagagaggggaatcccctccaaacatccaggatattcagta i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12737152 287 + 14340318 -t-aaaaaaaaaaaaaagagagagaacccagatcaaagctcaatgg-ttaagcagctggaatttgtagagaaaaaaaagagaaaattatacagatg-aaggagccagggaccagcagaagttttctcccgggt---------cctc-tgccacgtgggcataggaagaaattccatgaagctcagaaagggca-cctaccaaGGAGTGGCAAGGCAGACGCG-CCCGGATGGCACACGGCCGG-AGGCACACTGGCTCTGTCCAGCCGGAGTGGGGAGCCCTCACTGCAC-CCCAGG--ACTCAGCA i otoGar3.GL873564 I 258 C 0 s canFam3.chr18 51756168 264 - 55844845 TC-AAAATTCAAA-------------------------------GC-CTAAGAAGATGGAATTTGGAG----------GAGAATGATAAAGAAAAATAAGAAGCCAAAGATCATCATAAGGATTCCTCCAACTTTTGCTAAATCCAAAGCCAAACTTATACAGGATGAAATCCTAAGAAGCTCAGCAAAGAACAGCTGCCAGGAATTTATAAACTGAACAATCCCTAGACATTACATTGTAAGATGGCATGGTAGCATTGACAAGATGAAGTGGACAATCCTCACTAACCATCCAGAATGCTCAGCA i canFam3.chr18 C 0 I 3167 a score=1079680.000000 s hg38.chr22_KI270732v1_random 9508 112 + 41543 aagaccactggaggttcataccctagtgacagtgctcatttagctccaagttacagatggctctagactaactccacaaagtttaaagagaagatttaaaacaacaacagac s panTro5.chr2B 114755283 111 - 133216015 aagaccactggag-tttatgccctagtgacagtgctcatttagctccaaattacagatggctctagactaactcaacaaagtttaaagagaagatttaaaacaacaacagaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82697545 112 - 135337776 AAGACCACTGGAGGTTCATGCCCTAGTGACAGTGCTCATTTAGCTCCAAATTACAGATGGCTCTAGACTAACTCAACAAAGTTTAAAGAGAAGATTTAAAACAACAATGGAA i panPan2.chr12 C 0 I 601 s gorGor5.CYUI01000341v1 124055 111 + 150013 AAGACCACTGGAGGTTCATGCCCTAGTGACAGTGCTCATTTAGCTCCAA-TTACAGATGGCTCTAGACTAACTCAACAAAGTTTAAAGAGAAGATTTAAAACAACAACAGAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40157816 112 - 81552678 aagaccactggaggttcatgtcccagtgacagtgctcatttagctccaaattacaggtggctctagactaactcaacaaagtttaaagagaagatttaaaacaacaacagaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133465941 112 - 185818997 aagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacagga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295620 112 + 192294377 aagaccacgggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacagga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777535 112 + 3123512 aagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacagga i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498104 112 + 10077455 aagaccactggaggttcatgccctagtaatagtgctcagttagctctaaattacagatggctctagaataactcaacaatgtttaaagagaagatttaaaacagcaacagga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704174 112 + 127223203 aagaccactggaggttcatgccctagggatagtgctcatttagctctaaattacagatggctctagaataactcaagaaagtttaaagagaagatttaaaacagcaacagga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164384 112 - 1799296 AAGACCACTGGAGGTTCATGCCCTAGTGATAGTGCTCATTTAGCTCTAAATTACAGATGGCTCTAGAATAACTCAACAATGTTTAAAGAGAAGATTTAAAACAGCAACAGGA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747032 112 + 6934359 aagaccactggaagttcatgccctagtgatagtgctcatttagctctaaattacagatggctctagaataactcaacaaagtttaaagagaagatttaaaacagcaacagga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107029 109 - 128169293 aagaccaatggaggttcacgccctagtgatagtgctcggttagctctgaattaaagatggatctggacaaactcaacaaagtttaaagagaagatttaaaacaacagaa--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 724668 109 - 18371965 aagaccagtggaggttcacgccctagtgatagtgctcagttagctctgaactaaagatgactctagacaaactcaacaaagtttaaagagaagatttaaaacaacagaa--- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384539 109 + 3566421 aagaccaatggaggttcatgccctagtgataatgctcagttagctctgaattaaagatggctctaggcaaactcaacaaagtttaaagagaagatttaaaacaacagaa--- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886390 109 - 9267652 aagaccaatggaggttcatgccctggtgataatgctcagttagctatgaattaaagatggctctagactaactcaacaaagtttaaacagaagatttaaaacaacagaa--- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12737439 95 + 14340318 GAGA-----------------CCTGGAGACAGGGCTCAAGCAGCCCTGAATTACAGATGGGTCTAGAGCAGCCCGGAGACGTTTGGAGAGGAGCCTTATGACAACAACGCAG i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51756432 3167 - 55844845 I a score=853571.000000 s hg38.chr22_KI270732v1_random 9620 87 + 41543 aaatactca---tcctgaagttactgaactgcctgccac--------aacattgttcaaaggtagccaataaaatctagatattcaata--gcataacat s panTro5.chr2B 114755394 87 - 133216015 aaagactca---tcctgaagttactgaactgcctgccac--------aacattgttcaaaggtagccaataaaatctagatattcaata--gcataacat i panTro5.chr2B C 0 C 0 s panPan2.chr12 82698258 87 - 135337776 aaATACTCA---TCCTGAAGTTACTGAACTGCCTTCCAC--------GTCATTGTTCAAAGGTAGCCAATCAAATCTAGATATTCAATA--GCATAACAC i panPan2.chr12 I 601 C 0 s gorGor5.CYUI01000341v1 124166 87 + 150013 AAATACTCA---TCCTGAAGTTACTGAACTGCCTGCCAC--------AACATTGTTCAAAGGTAGCCAATCAAATCTAGATATTCAATA--GCATAACAC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40157928 87 - 81552678 aaatataca---tcctgaagttactgaactgtgtgccac--------aacattgttcaaaggtagccaataaaatctagatattcaata--gcataacat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133466053 87 - 185818997 aaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295732 87 + 192294377 aaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777647 87 + 3123512 aaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498216 87 + 10077455 aaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704286 87 + 127223203 aaatattca---tcctaaagttactgaactgcctgccac--------gacactgttcaaaggtagccaataaaatccagatattgaata--gcataacat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164496 87 - 1799296 AAATACTCA---TCCTAAAGTTACTGAACTGCCTGCCAC--------AACACTGTTCAAAGGTAGCCAATATAATCCAGATATTGAATA--GCATAGCAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747144 87 + 6934359 aaatactca---tcctaaagttactgaactgcctgccac--------aacactgttcaaaggtagccaataaaatccaggtattgaata--gcataacat i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107138 91 - 128169293 aaatactga---tactgaagtcactgaactgcctgccaca----ataaacgctattgagaggtagccagtaaattccagatattcaaca--gcataacat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 724777 91 - 18371965 aaatactga---tcctgaagtcactgaactgcctgccaca----ataaacactattcaaaggtagccaataaattccagatattcaata--gcataacat i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384648 91 + 3566421 aaatactga---tcctgaaatcactgaactgcctgccaca----acaaacattgttcaaaggtagccaataaattccagatattcaata--gcataacat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886499 91 - 9267652 aaatactga---tcctgaagtcactgaactgcctgccaca----ataaacactattcaaaggtagccaataaattccagatattcaata--ccataacat i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12737534 100 + 14340318 AAACAGAAAAGCTCCTCACGCCCCTGAGCTGCGCGCCAGAGGAGACGAACGCTGTCCAAAGGTGGCCAGTAAAATCCAGATGTTTCGTACTGTGTGACAT i otoGar3.GL873564 C 0 I 4516 e canFam3.chr18 51756432 3167 - 55844845 I a score=2175484.000000 s hg38.chr22_KI270732v1_random 9707 265 + 41543 caaaatacccccccaaaaaaaaaactctgacatgcaaagaagccgtaagatatatataattaagatatatattaacaggataaaaa-taagtcatttataaatgacagaaaagaaggaaatttcaaggtccttaaagtaa-atatattttatgaatacat--------------------------------------------acagataaatacatatatatgtcaa------------tgtacttaaatgaaaattgaacataggagaaaaatagaagttataaaatgaaaaatgtgacacgtatagatgaaaaataaat s panTro5.chr2B 114755481 263 - 133216015 caaaatacccccaccaaaaaaaaactctgacatgcaaagaagccggaagatatATATTATTAAGATATATATTAACAGGATAAAAA-TAAGTCATTTATAAATGACAGAA--GAAGGAATTTTCAAGGTCCTTAAAGTAA-ATATATTTTATAAATACAT--------------------------------------------ACAGATAAATACATATATATGTCAA------------AGTACTTaaatgaaaattgaacataggagaaaaatggaagttataaaatgaaaaatgtgacatgtatagatgaaaaataaat i panTro5.chr2B C 0 C 0 s panPan2.chr12 82698345 261 - 135337776 CAAAATACCCCC----AAAAAAAACTCTGACATGCAAAGAATCCTTAAGATATATATAATGAAGACATATCTTAACAGGATAAAAA-TAAGTCATTTATAAATGACAGAGAAGAAAGAAATTTCAAGGTTCTTTAAGtaa-atatattttataaatacat--------------------------------------------atagataaatacatatatatGTCAA------------GGTACTTAAATGAAAATTGAACATAGGAGAAAAATAGAAGTTTTAAAATGAAAAATGTGGCATGTATAGATGAAAAATAAAT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 124253 259 + 150013 CAAAATACCCCC-----CAAAAAACTCTGACATGCAAAGAAGCCGTAAGATATATATAATTAAGATATATATTAACAGGATAAAAA-TAAGTCATTTATAAATGACAGAA-AGAAGGAAATTTCAAGGTCCTTAAAGtaa-atatattttataaatacat--------------------------------------------atagataaatacatatatatGTCAA------------GGTACTTAAATGAAAATTGAACATAGGAGAAAAATAGAAGTTATAAAATGAAAAATGTGACATGTATAGATGAAAAATAAAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158015 263 - 81552678 caaaataccccccc--aaaaaaaactctgacatgcaaagaagccagaagatatatattattaagatatatattaacctgataagaa-taagccatttataaatggcagagaagaaggaattgtcaaggtccttaaagtaa-atatattttataaatacat--------------------------------------------atagataaatacatatatatgtgaa------------attaattaaatgaaaattgaacataggagaaaaatagaagttataaaatgaaaaatgtgacatgtataaatgaaaaataaat i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133466140 254 - 185818997 caaaatacccc--------aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagatat--------------------------------------------atagataa----atatatatgtcaa------------attacttaaatgaaaattgaacataggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67295819 254 + 192294377 caaaatacccc--------aaaatttctgacatgcaaagaagcaggaagatatATATTATTAAGATATATATTAACAGGATAAAAA-TAGGTCATTTATAAATGACAGAGAAGAAGGAATTTTCAAGGTCCTTAAAGTAatatatattttataaagatat--------------------------------------------atagataa----atatatatGTCAA------------ATTACTTAAATGAAAATTGAACATaggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaat i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777734 254 + 3123512 caaaatacccc--------aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagatat--------------------------------------------acagataa----atatatatgtcaa------------attacttaaatgaaaattgagcataggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498303 254 + 10077455 caaaatacccc--------aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagatat--------------------------------------------atagataa----atatatatgtcaa------------attacttaaatgaaaattgaacataggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704373 254 + 127223203 caaaatacccc--------aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taggtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagatat--------------------------------------------atagataa----atatatatgtcaa------------attacttaaatgaaagttgaacataggagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164583 254 - 1799296 CAAAATACCCC--------AAAATTTCTGACATGCAAAGAAGCAGGAAGACATATATTATTAAGATATATATTAACAGGATAAAAA-TAGGTCATTTATAAATGACAGAAAGGAAGGAATTTTCAAGGTCCTTAAAGTAatatatatttcataaagatat--------------------------------------------atagataa----atatatatGTCAA------------ATTACTTAAATGAAAATTGAACATAGGagaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaat i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747231 251 + 6934359 caaaatacccc--------aaaatttctgacatgcaaagaagcaggaagatatatattattaagatatatattaacaggataaaaa-taagtcatttataaatgacagagaagaaggaattttcaaggtccttaaagtaatatatattttataaagacat--------------------------------------------atagataa----atacatatgtcaa------------attgcttaaatgaaaattgaacat---agaaaaatagaagttataaaatgaaaagtgtgacatgtatagatgaaaaataaat i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107229 266 - 128169293 caaaattaccc----ccaacaaaaccctgatatgcaaagaaacaggaagatatGTATTATTAAGATATAGGTTAACAGGAAAAAAAGTAAGTCATTTATAAATGACAGAGAAGAAGGAATTTTCAAGGTCCTTAAAGTAATATGTATTTTataaacacac----------------------------------acacacacacgtacataaatacatatatgtatCAA------------ATTTCTTAAATGAAAACTGAACATAGGGAAAAAATAGAAGTTAC-------AAAATGTCACATGTATAGATGAACAATAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 724868 312 - 18371965 caaagtagccc----ccaacaaaaccctggcatgcaaagaaacagaaagatatgtattattaatatatgtattaacaggagaaaa--taagtcatttataaatgacagagaaGAAGGAATTTTCAAGGTCCTTAAAGTAATATATATCTTATAGacacacacacacacacacacacacacatacacacacatatacacacacacacacatatacaTATATATATATAAACATAACGATGTCAATTTTTAAATGAAAATTGAACATAGGGAAAAAATAGAAGTTATA-----AAAAATGTGACATGTATAGATGAACAATAAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1384739 281 + 3566421 caaagtacccc----ccaacaaaaccctgacatgcaaagaaacaggaagatatatattattaagatatatatgaacaggagaaaaa-taaatcatttataaatgacagagaagagggaattttcaaggtccttaaagtaatatatattttataaatacacacacacacacacacac------------------acacacacacatatataaatacatatatatgtcaa------------atttcttaaatgaaaattgaacac--ggaaaaaatagaagttata-----aaaaatgtgacacatatagatgaataataaat i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886590 273 - 9267652 caaagtaccat----gcaacaaaaccctgacatgcaaagaaacaggaagatatatattattaagatatatattaacaggagaaaaa-taagtcatttataaatgacagagaaGAAGGAATTTTCAAGGTCCGTAAAGTAatatatatttcataaatacacacacac----------------------------gtatatatatatatgaaaatacatatatatGTCAG------------ATTTCTTAAATGAAAATTGAACATAGGGAAAAAATAGAAGTTATA-----AAAAATGTGACATGTATAGATGAACAATAAAT i aotNan1.NW_018514471v1 C 0 I 128 e otoGar3.GL873564 12737634 4516 + 14340318 I e canFam3.chr18 51756432 3167 - 55844845 I a score=2004362.000000 s hg38.chr22_KI270732v1_random 9972 271 + 41543 atttgaaataaaaattccatgagatggaataagtaatggattttaccctaacatcagaaaatttatagaaaaaaaatagaagctttacaaactaaaggacaaagggtaaactaaaataagaaagccagaaactcactgatacatcagacaatatgcagcagtgtaacatacatgtaattaacatctcaaaaagGATGGGTGGGGGAATTATAGGTGAATAAAGAATGGTACACTCATTCCTGAGGGCACCGAGGAGGGAAGATAACTTTAG s panTro5.chr2B 114755744 269 - 133216015 atcttaaataaaaatTCCATGAGATAGAATAAGTCATGGATTTTACCCTAACATCAGAAAATATATAGAAAAAT--TAGAAGCTTTACAAACTAAAGGACAAAGGGTAAACTAAAATAAGAAAACCAGAAACTCACTGATACGTGAGACAATATGCAGCAGTGTAACATACATTTAATTAATATCTCAAAAGGGATGGGTGGGGGAATTATAGTTGAATAAAGAATGGTACATTCATTCCTGAGGGCACCGAGGAGGGAGGATAGCTTGAG i panTro5.chr2B C 0 C 0 s panPan2.chr12 82698606 270 - 135337776 ATTTGAAATAAAAATTCCATGAGATAGAATAAGTAATGGATTTTACCCTAACATCAGAAAATTTGTAGAACAAA-ATAGAAGCTTTACTAACTAAAGGACAAAGGGTAAACTAAAATAAGAAAGCCAGAAACTCACTGATACGTCAGACAATATGCAGCAGTGTAACATACATGTAATCAATATCTCAAAAAGGATGGGTGGGGGAATTATAGGTGTATAAAGAATGGTACACTCATTCCTGAGGGCACCGAGGAGGGAGGATAGCTTTAG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 124512 267 + 150013 ATTTGAAATAAAAATTCCATGAGATAGAATAAGTAATGGATTTTACCCTAACATCAGAAAATTTATAGAAAAAA--TAGAAGCTTTACAAACTAAAGGACAAAGGGTAAACTAAAATAAGAAAGCCAGAAACTCACTGATACATCAGACAATATGCAGCAGTGTAACATACATGTAATTAATATCTCAAAAAGGATGGGT-GGGGAATTATAGGTGAATAAAGAATGGTACACTCATTCCTGAGGGCA-CGAGGAGGGAGGATAGCTTTAG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158278 271 - 81552678 atttgaaataaaaattccatgagatagaataagtaatggaatttaccctaacatcaggaaatttatagaaaaaaaatagaagctttacaaactaaaggacaaagggtaaactaaaataagaaagccagaaactcactgataagtgagacaatatgcagcagtgtaacatacatgtaattaatatctcaaaaatgatgggtgggggaattatagttgaataaagaatggTACACTAATTCTTGAGGGCACCGAGGAGGGAAGATAGCTTGAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133466394 243 - 185818997 atttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatagacaaaa-atagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGGGGGAATTACAGTTGAATAAagaatgggacactcattcctgag--------------------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296073 243 + 192294377 atttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatagacaaaa-atagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGGGGGAATTACAGTTGAATAAagaatgggacactcattcctgag--------------------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2777988 243 + 3123512 atttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatagacaaaa-atagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGGGGGAATTACAGTTGAATAAagaatgggacactcattcctgag--------------------------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498557 243 + 10077455 atttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatagacagaa-atagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGGGGGAATTACAGTTGAATAAagaatgggacattcattcctgag--------------------------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704627 243 + 127223203 atttgaaataaaaattccatgagatacaataagtaatggattttaccctaacatcagaagatttatagacaaaa-atagaagctttacaaactgaaggacaaaggggaaactaaaataagaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaattggtatctcaaaaagggtggGTGGGGGAATTACAGTTGAATAAagaatgggacactcattcctgag--------------------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1164837 243 - 1799296 atttgaaataaaaattccatgagctaaaataagtagtggattttaccctaacatcagaagatttatagacaaaa-atagaagctttacaaactgaaggacaaaggggaaactaaaataaaaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggTGGGTGGGGGAATTATAGTTGAATAAagaatgggacactcattcctgag--------------------------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747482 243 + 6934359 ctttgaaatgaaaattccgtgagatataataagtaatggattttaccctaacatcagaagatttatagacaaaa-atagaagctttacaaactgaaggacaaaggaggaactaaaataagaaagccagaaactcactgatacatgagacaatatgcagcagtgtaacatacatgtaactggtatctcaaaaagggtggGTGGGGGAATTATAGTTGAATAAagaatgggacactcattcctgag--------------------------- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107495 241 - 128169293 GTTTAAAATAAAAATTCCAAGAGACAGAATGAGTAATGAATTTTACCCTAACATCAGAAAATGTACAGACAAAa-atagaagctttacaaactgaaggacaaaggggaaactaaaataggaaagccagaaactcactgatccatgagacaatatgcagccatgtaacatacgtgtaattggtatctcaaaaagGATGTGTGGGGGAATTACAGTTGAATAACTAATAGTAAACTCATTcctg----------------------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725180 241 - 18371965 GTTTAAAATAAAAATTCCACAAGACAGAATAAGTAACGAATTTTGCCCTAACATCTGAAAGTttacagacaaaa-atagaagctttacaaactgaaggacaaaggggaaactaaaataggaaagccagaagctcactgatccaggagccagcatgcagccctgtaacatacgtgtcattggtatctcagaaagGATGGGTGTGGGAATTACAGTTGAATAAATaatagtacactcattcctg----------------------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385020 241 + 3566421 gtttaaaataaaaattccatgagacagaataagtaatggattttaccctaacatcagaaaatttacagacaaaa-atagaagctttacaaactgaaggacaaaggggaaactaaaataggaaagccagaaactcactgatccatgagacgatatgcagccatgtaacatacgtgtaattggtatctcaaaaaggatgggtgggggaaTTATAGTTGAATAAATAATAGTAcactcattcctg----------------------------- i cebCap1.NW_016107540v1 C 0 C 0 e aotNan1.NW_018514471v1 1886863 128 - 9267652 I e otoGar3.GL873564 12737634 4516 + 14340318 I e canFam3.chr18 51756432 3167 - 55844845 I a score=7505.000000 s hg38.chr22_KI270732v1_random 10243 8 + 41543 ATTTctaa s panTro5.chr2B 114756013 8 - 133216015 ATTcctaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82698876 8 - 135337776 ATTcctaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 124779 8 + 150013 ATTTctaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158549 8 - 81552678 ATTcctaa i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108107736 1 - 128169293 -------a i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725421 1 - 18371965 -------a i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385261 1 + 3566421 -------a i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886991 8 - 9267652 atttctga i aotNan1.NW_018514471v1 I 128 C 0 e otoGar3.GL873564 12737634 4516 + 14340318 I e colAng1.NW_012115910v1 1747725 0 + 6934359 C e manLeu1.NW_012105809v1 1165080 0 - 1799296 C e chlSab2.chr21 5704870 0 + 127223203 C e cerAty1.NW_012000909v1 2498800 0 + 10077455 C e macNem1.NW_012011522v1 2778231 0 + 3123512 C e rheMac8.chr3 133466637 0 - 185818997 C e macFas5.chr3 67296316 0 + 192294377 C e canFam3.chr18 51756432 3167 - 55844845 I a score=637785.000000 s hg38.chr22_KI270732v1_random 10251 72 + 41543 gggagggta-ttatccattcatgaagg-tccaa-ccccatgaccaaa-cacctcccagtaagccccacctgcgaca s panTro5.chr2B 114756021 72 - 133216015 ggaagggta-ttatccattcatgaagt-tccat-ccccatgaccaaa-caccacccagtaagccccacctgcaaca i panTro5.chr2B C 0 C 0 s panPan2.chr12 82698884 73 - 135337776 gggagggta-ttatccatccatgaagg-tccaacccccgtgaaaaaa-cacctcccagtaagacccacctgcaaca i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 124787 72 + 150013 gggagggta-ttatccattcatgaagg-tccaa-ccccatgaccaaa-cacctcccagtaagccccacctgcaaca i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158557 72 - 81552678 gggaggtta-ttatcaattcatgaagg-tccaa-ccccattacccaa-cacctcccagttagccccacctgcaaca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133466637 72 - 185818997 ggaggggta-ttatccgttcctgaggg-tccat-tcccatgacccaa-cacctcccagtaagccctacctgcaaca i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296316 72 + 192294377 ggaggggta-ttatccgttcctgaggg-tccat-tcccatgacccaa-cacctcccagtaagccctacctgcaaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778231 72 + 3123512 ggaggggta-ttatccgttgctgaggg-tccat-tcccatgacccaa-cacctcccagtaagccctacctgcaaca i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498800 72 + 10077455 ggaggggta-ttatccgttcgtgaggg-tccat-tcccatgacccaa-cacctcccagtaagccctacctgcaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704870 72 + 127223203 ggaggggta-ttatcccttcgtgaggg-tccat-tcccatgacccaa-cacctcccagtaagccctgcctgcaaca i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165080 72 - 1799296 ggaggggta-ttatccgttcgtgaggg-tccat-tcccatgacccaa-cacctcccagtaagccctacctgcaaca i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747725 72 + 6934359 ggaggggta-ttatccattcatgagag-tccat-tcccatgacccaa-cacttcccagtaagccctacctgcaaca i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108107737 72 - 128169293 gggaggata-ttatccattcatgaggg-tccat-ccccatgacccaa-catctcccagtaggtcccaccttcaaca i calJac3.chr8 C 0 I 310 s saiBol1.JH378145 725422 58 - 18371965 gagagggta-tta---------------tccat-ctccatgacccaa-catctcccagtaggtcccaccttcaaca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385262 71 + 3566421 gcgagggta-ttatccattcatgagg--tccat-ccccatgacccaa-catatcccaataggtcccaccttcaaca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1886999 72 - 9267652 gggaggata-ttatccatttatgaag--tccat-ccccatgacccaattatctcccagtaggtcccaccttcaaca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742150 72 + 14340318 gggagggcatttacctattcaggagggattcac-ccc--tgacccag-cacctcccactgggccccagctctaaca i otoGar3.GL873564 I 4516 C 0 e canFam3.chr18 51756432 3167 - 55844845 I a score=574408.000000 s hg38.chr22_KI270732v1_random 10323 57 + 41543 ttggggatcaaattttaacatgagatt-ggaaggggcaagcattcaaaccatagcaAG s panTro5.chr2B 114756093 58 - 133216015 ttggggatcaaattttaacaggagatttggaaggggcaagcattcaaaccatagcaAG i panTro5.chr2B C 0 C 0 s panPan2.chr12 82698957 57 - 135337776 ttggggatcaaattttaacatgagatt-ggaaggggcaagcattcaaaccatagcaAG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 124859 57 + 150013 ttggggatcaaattttaacatgagatt-ggaaggggcaagcattcaaaccatagcaAG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158629 58 - 81552678 ttggggatcaaattttaacatgaggtttggaaggggcaaacattcaaaccatagcaAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133466709 58 - 185818997 cttggtatcaaatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296388 58 + 192294377 cttggtatcaaatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778303 58 + 3123512 cttggtatcagatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498872 58 + 10077455 cttggtatcagatttcagcatgaaatttggaaggggcaagctttcaaaccatagcaAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5704942 58 + 127223203 cttggtatcagatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165152 58 - 1799296 cttggtatcaaatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747797 58 + 6934359 ctggggatcaaatttcagcatgagatttggaaggggcaagctttcaaaccatagcaAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108119 58 - 128169293 ttggggatcaaattttaacatgagatttggagaggacaagcattcaaacggtagcaAA i calJac3.chr8 I 310 C 0 s saiBol1.JH378145 725480 58 - 18371965 ctggggatcaaattttaacgtgagatttggagaggacaagcattcaaaccatagcaAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385333 58 + 3566421 ctggggatcaaattttaacatgagatttggagaggacaagcattcaaaccgtagcaAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1887071 58 - 9267652 ctggggatcaaattttaacatgagatttggagaggacaagcattcaaaccatagcaAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742222 58 + 14340318 tcagggaccaagtttcaacatgcagtttggaggagacaaacaaccaaaccatagcaGT i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51756432 3167 - 55844845 I a score=1713497.000000 s hg38.chr22_KI270732v1_random 10380 178 + 41543 AGTTAAATTTCCTTTTTA-------AAAAAAATCACTGATATGATTCCATTTTGCCATAGATAAAAGCTAGTATTTCAGCCTACC---ATTGAGTGTGCTTATAGCTCACCAAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCTAAAGGTATCCTATTGCAGTC-ATAGAAAGAACAACGAGGGAT s panTro5.chr2B 114756151 176 - 133216015 AGTTAAAATTCCTTT--A-------AAAAAAAACACTGATATGATTCCATTTCGCCATAGATAAAAACTATCATTTCAGCCTACC---ATTGAGTGTACTTATAGCTAACGGAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82699014 178 - 135337776 AGTTAAATTTCCTTTTTA-------AAAAAAATCACTGATATGATTCCATTTCACCGTAGATAAAAGCTAGTATTTCAGCCTACC---ATTGAGTGTACTTATAGCTCACCAAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 124916 177 + 150013 AGTTAAATTTCCTTTTT--------AAAAAAATCACTGATATGATTCCATTTCACCATAGATAAAAGCTAGTATTTCAGCCTACC---ATTGAGTGTACTTATAGCTCACCAAAAGGGCACTCTGTCTCGGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158687 177 - 81552678 CGTTAAATTTCCTTT-TA-------AAAAAAATCACGGATATGATTCAATTTTGTCATAGATAAAAACTAGTATTTCAGCCTACC---ATTGAGTGTACTTATAGCTAATCAAAAAGGCACTCTGCCTCGGGAATACAGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133466767 176 - 185818997 AGTTAAATTTCCA-T-TA-------AAAAAAATCACTGATGTGATTCCATTTCGCCATAGATAAAAACTAATACTTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296446 177 + 192294377 AGTTAAATTTCCATT-TA-------AAAAAAATCACTGATGTGATTCCATTTCGCCATAGATAAAAACTAATACTTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778361 177 + 3123512 AGTTAAATTTCCATT-TA-------AAAAAAATCACTGATGTGATTCCATTTTGCCATAGATAAAAACTAATACTTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCAGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATTGCAGTC-AAAGAAAGAGCAATGAGGGAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2498930 177 + 10077455 AGTTAAATTTCCATT-TA-------AAAAAAATCACTGATATGATTCCATTTCGCCATAGATAAAAACTAATACTTCAACCTACC---CCTGAGTGTACTTATAGCTAACCCACAGGGCACTCTGTCTCGGGAATATGGATTTGCCTAGAGGTATCCTATAGCAGTC-AAAGAAAGAGCAATGAGGGAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5705000 178 + 127223203 AGTTAAATTTCCATT-TT-------AAAAAAATCACTGATACGATTCCATTTCGCCATAGATAAAAAATAATACCTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCTATCTCGGGAATACGGATTTGCCTAGAGGTATCCTATCGCAGTCAAAAGAAAGAGCAATGAGGGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165210 177 - 1799296 AGTTAAATTTCCATT-TA-------AAAAAAATCACTGATATGATTCCATGTCGCCATAGATAAAAACTAATACTTCAACCTACC---ACTGAGTGTACTTATAGCTAACCCACAGGGCACTCTGTCTCAGGAATACGGATTTGCCTAGAGGTATCCTATAGCAGTC-AAAGAAAGAGCAATGAGGGAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1747855 176 + 6934359 AGTTAAATTCCCATT-TT--------AAAAAATCACTGATATGACTCCATTTCACCATAGATAAAAACTAGTATTTCAGCCTACC---ACTGAGTCTACTTACAGCTAACCCACAGGGCACTCTGTCTCGGGAATATGGATTTGTTTAGAGGTATCCTATCGCAGTC-AAAGAAAGAGCAATGAGGGAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108177 178 - 128169293 AATTAAATTTCCAT--TT-------AAAAAAATCACTAATATGATTCCATTTCACCAT-AATAAAAACTAGTATTTCAGCCTACCCTTAATGAGTGTACTCACAGCTAACCCAAAGGGCACTCTGTCTCTGGAATACAGACTTGCCTAGAGGTGTCCTATCACAGTC-AGAGAAAGAGCAATGAGAGAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 725538 166 - 18371965 AGTTAAATTTCCA---TT-------AAAAAAATCACTGATATGATTCCATTTCACCATAAATAAAAACTAACATTTCAGCCTACCCTGAATG------------GCTAACCCAAAGGGCACTCTGTCTCTGGAATACAGACTTGCCTAGAGGTATCCTGTCATAGTC-AAAGAAAGAGCAACGAGAGAT i saiBol1.JH378145 C 0 I 322 s cebCap1.NW_016107540v1 1385391 179 + 3566421 AGTTAAATTTCCAT--TA-------AAAAAAATCACTGATATGATTCCATTACACCATAAATAAAAACTAATATTTCAGCCTACCCTTAATGAGTGTACTCGTAGCTAACCCAAAGGGCGCTCTGTCTCTGGAATACAGACTTGCCTAGAGGTACCCTATCACAGTC-AAAGAAAGAGCAATGAGGGAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1887129 178 - 9267652 AATTAAATTTCCA---TT-------AAAAAAATCACTGATATGGTTCCATTTCACCATAAATAAAAACTAATATTTCAGTCTACCCTTAATGAGTGTACTCATAGCTAACCCAAAGGGCACTCTGTCTCTGGAATACAAACTTGCCTAGCGGTATCCTATCACAGCC-AAAGAAAGAGCAATGAGGGAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12742280 168 + 14340318 GGTTAAATTTCCACT-TAAAAAAAGAAAAAAATCACCAAAATTAT----TTTCCCCACCAACGAAC-CTCATATTTCAGCCTGCC-TTTATGAACATACT-----CTCCACCACAAGGCACTTTG-----GAGATACAGATTTGGTTAGGGGGATCTCATTATAGAC----CAAAGAGGAAGAAGGAAC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51759599 177 - 55844845 AGTTAAAATTCCATT-TA---------AAAATTTAATAAAATGATT--GTTTTGCCATAGATAAAGCCAAATAATTCAGCCTATCTTTAAGAAGAATACTCGTATGTAAAGCAAAGGGCACTTTGTCTCTGGGATGTAGATTTTGTTAAGCGTATCCAATGATAGCTGAAATGAAGAGGAATAAGGGCT i canFam3.chr18 I 3167 C 0 a score=337739.000000 s hg38.chr22_KI270732v1_random 10558 45 + 41543 AGAAAAGGTTAGTGATGGAGACACCAGCG--CTGCATTTTGCA----AA--AA s panTro5.chr2B 114756327 45 - 133216015 GGAAAAGGTTAGTGATGGAGACACCAACG--CTGCATTTTACA----AC--AA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82699192 45 - 135337776 AGACAAGGTTAGTGATGGAGACACCAGTG--CTGCATTTTGCA----AC--AA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 125093 45 + 150013 AGAAAAGGTTAGTGATGGAGACACCAGCG--CTGCATTTTGCA----AC--AA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158864 45 - 81552678 AGAAAAGGTTAGTGATGGAGACACCAACG--CTGCATTTTACA----AC--AA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133466943 45 - 185818997 AGAAAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACA----AC--AA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296623 45 + 192294377 AGAAAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACA----AC--AA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778538 45 + 3123512 AGAAAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACA----AC--AA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2499107 45 + 10077455 AGAAAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACA----AC--AA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5705178 45 + 127223203 AGAAGAGGTTAGTGATGGAGACAGCAACG--CTGCATTTTACA----AC--AA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165387 45 - 1799296 AGAGAAGGTTAGTGATGGAGACAGCAACA--CTGCATTTTACA----AC--AA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1748031 45 + 6934359 AGAAAAGGTTAGTGATGGAGACTGCAACA--CTGCATTTTACA----AC--AA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108355 41 - 128169293 AGAAAAAAGTAGTTGTGTAGACACCAGTG--CTGTGTTTTACA---------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 726026 41 - 18371965 agaaaaAGGTAGTTGTGTAGACACCAATG--CTGCATTTTACA---------- i saiBol1.JH378145 I 322 C 0 s cebCap1.NW_016107540v1 1385570 41 + 3566421 AGAAAAAGGTAGTTGTGTAGACACCAATG--CTGCATTTTACA---------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1887307 45 - 9267652 AGAAAAAGGTAGTTGTGTCGACACCAATG--CTGCATTTTACAAAAA------ i aotNan1.NW_018514471v1 C 0 I 15 s otoGar3.GL873564 12742448 30 + 14340318 AGAGAGGCCGAGCGGTGGGAATGCTGACA--C--------------------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51759776 49 - 55844845 ATAGAAGGTGAGTAGTGGAGACATCAAAATCCTGTATTGTAGA----ACTTAA i canFam3.chr18 C 0 C 0 a score=146534.000000 s hg38.chr22_KI270732v1_random 10603 20 + 41543 ACAATGTAAAAGCTTTACGG s panTro5.chr2B 114756372 20 - 133216015 ACAATGTAAAAACTTTACGG i panTro5.chr2B C 0 C 0 s panPan2.chr12 82699237 20 - 135337776 ACAATGTAAAAACTTTACGG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 125138 19 + 150013 ACAATGTAAAAA-TTTACGG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158909 20 - 81552678 ACAATGTAAAAACTTTACGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133466988 20 - 185818997 ACAATGTAAGAACTTTACAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296668 20 + 192294377 ACAATGTAAGAACTTTACAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778583 20 + 3123512 ACAATGTAAGAACTTTACAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2499152 20 + 10077455 ACAATGTAAGAACTTTACGG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5705223 20 + 127223203 ACAATGTAAGAACTTTATGG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165432 20 - 1799296 ACAATGTAAGAACTTTACGG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1748076 20 + 6934359 ACAGTGTAAGAACTTTACGG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108396 19 - 128169293 ACAATGTAGGAACTTTACA- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 726067 19 - 18371965 ACAATGTAGGAACTTTACA- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1385611 19 + 3566421 ACAATGTAGGAACTTCACA- i cebCap1.NW_016107540v1 C 0 C 0 s otoGar3.GL873564 12742478 9 + 14340318 ACATTGTGA----------- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51759825 20 - 55844845 ACTTTACAGAAGCATTATGG i canFam3.chr18 C 0 C 0 e aotNan1.NW_018514471v1 1887352 15 - 9267652 I a score=10913523.000000 s hg38.chr22_KI270732v1_random 10623 987 + 41543 ATTGGTTCTGCTAACTTTCTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGCG------TTTTTTCTTAAGAAAGAAAAGCAATTCAGACAATCTGAAATCTCC---ACAAGAA-GGATAAGAAGCAC------AACAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACT-GTCTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCACATGAGGTACAGACAACAGCCAGACCTCTGATCCTCTCATTAGTGATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTCAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTACTCGTATCACATCCGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCGAGGTGGATGGAAGA---G--AAAAAAAAGAATAATCAGCTGGAGTTCTTCTCCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAA----TAACCAG-AAGAAGACGACTCTAGAG-TTTTTAAATTGC-GATGAGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTGCTTGTGTTTTAAGGCCCATAATGAGCAATTATATCACAACATGATAGTTTCAGCAGTAAAATATTATCCGTTAACAGCGGGAACTCTTAAAAGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAACCACTATTCTGCAAATTTAAAAATAAAGTTT-AATGTTATTTGTCTTATTTAATATGTCTGTGAAAAAA----ATGCGCTATTTGAAAAGTAGCTGCTACCTTAATTAATTCTTTATATTAGACAGCTGGTTACAGTAATGCACAGTAAGGTGCTACATAGATATATTGCTAAATTTTCTGCA----TATACTATGTATTTG s panTro5.chr2B 114756392 993 - 133216015 ATTGCTTCTGCTAACTTACTAAAGTTTACATTCCTTTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGAA-GGATAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCATTGAACT-GTCTGTGCTCCATAGAAACGATTGTCTGCACTGGGAGTCATACGAGGTACAGACAACAGCCAGACCTCTGATCCTCTCATTAGTGATTTCAGAAGAAATTACCAGTCAGCTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-CAGAGGTTAGACGGATATCTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTACTGGTATCACATCCGAATGGAAGATGTTAAAAGGTCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTCACACACCAGCGAGGTGGATGGAAGA---GAAAAAAAAAAGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACGACTCTAGAC-TTTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATCGCTTGTGTTTTAAGGCACGTAATGAGCAATTATATCAC-ACATGATAGATTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTTGTCTTATTTAATAGGTCTGTG-AAAAA----ATGCGATATTTGAAAAGTAGGTGCTACCTTAATTAGTTCTTTATATTAGACAGCTGGTTACAGTAATGCACAGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGCA----TATACTATGTATTTA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82699257 989 - 135337776 ATTGGTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGCG------TTTTTCCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGAA-GGATAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACT-GTCTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACAGACCACAGCCAGACCTCTGATCCTCTCATTAGTGATTTCAGAAGAAATTAGCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTACTGGTATCACATCCGAATGGAAGATGTTAAAAGGTCTCTCATCTTGTAAGAAGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCGAGGGGGATGGAAGA---G-AAAAAAAAAGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAAC-TGACT-AAAAACA------TAAAGAGAAAAATAAAAGTTTAAAATAATTAACCAG-AAGAAGACGACTCTAGAG-ATTTTAAATTGCTGATAAGATATTAATTTGCTCCAAGTTGAAAATAATTATATTGCTTGTGTTTTAAGACACATAATGAGCAATTATATCAC-GCATAATAGTTTCAGCAGTAAAA---TATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGACGGAATTTGCTAAAATAAACCATCTGCTGAAAACTACTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTTGTCTTATTTAATAGGTCTGTGAAAAAA----ATGCGATATTTGAAAAGTAGGTGCTACCTTAATTAGTTCTTTATGTTAGACGACTGGTTACAGTAATGCACAGTAAGGTGCTACATAGACATATTGCT-AATTTTCTACA----TATACTATGTATTTG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 125157 987 + 150013 ATTGGTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGATAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGAA-GGATAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCAACT-GTCTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATAT-AGGTACAGACAACAGCCAGA-CTCTGATCCTCTCATTAGTGATTTCAGAAGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTACTGGTATCACATCCGAATGGAAGATGTTAAAAGGTCTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTATTAACACACCTGCGAGGTGGATGGAAGA---G---AAAAAAAGAATAATCAGCTTGAGTTCTTCTCCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACGACTCTAGAG--TTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGTTGAAAATAATTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGTTTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAACTACTATTCTGCAAATTTAAAAATAAAGTTTAAATGTTATTTGTCTTATTTAATATGTCTGTGAAAAAA----ATGCGATATTTGAAAAGTAGCTGCTACCTTAA-TAATTCTTTATATTAGACGGCTGGTTACAGTAATGCACAGTAAGGTGCTACATAGATATATTGCTAAATTTTCTGCA----TATACTATGTATTTG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40158929 992 - 81552678 ATTGCTTCTGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGATAGAAAAGCAATTCAGATCATCTGAAATCTCC---ACAAGAA-GGACAAGAAGCAC------AGCAGAAAGTATTCTAGGCAGGAAGTCAATCCTTTCAACT-GTCTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACAAGAAACAGCCAGACCTCTGATCCTCTCATTTGTGATTTCAGAAGAAATTACCAGTCATCTGAGTAATTCAC-TGAGTAAAGTAAACATACGGCACTGA-AAGAGGTTAGACGGATAAGTATTTGTATCACCATATTCATGAAGCTGGAATATTTTCCATTGCAGGTATCACATCTCAATTGAAGA-GTTAAAAGGTGTCTCATCTTGTAAGATGGATATGAAAGAACATTTTCTGAGAAATGAAATTGTTAACACACCTGTGAGGTGGATGGAAGA---GAAAAAAAAAAGAATAATCAGCTTGTGTTCTTCTCCTTGGTAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGACAACTTTAGAT-TTTTTAAA-TACTGATAAGATTTTAATTTCCTCTAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCATATAATCAGCAATTATATCAC-ACATGATAGATTTAGCAGTAAAATATTATCCGTTAGCAGCTGGAATTCATAAAAGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTCTGCAAATTTACAAATAAAGTTTAAACGTTATTTGTCTTATTTAATATGTGTGTGAAAAAA----ATGAGATATTTGAAAAGTAGGTGCTACCCTAATTAGTTCTTTATATTAGACAGTTGGTTACAGTAATGCACACTAACGTGCTACATACAAATATTGCTAAATTTTCTGCA----TATTCTATGTATTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133467008 993 - 185818997 ATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCT---ACAAGCA-GGATAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCATTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGATGGAAGA---G-GAAAAAAAAGAATAATCAGCTTGAGTACTTCTTCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGAT-TTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TATATTGTGTATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67296688 993 + 192294377 ATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCT---ACAAGCA-GGATAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGATGGAAGA---G-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGAT-TTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TATATTGTGTATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2778603 993 + 3123512 ATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCT---ACAAGCA-GGATAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTATCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTGACACACCTGCAAGGTGGATGGAAGA---G-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGAT-TTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTACATCAC-ACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCCAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TATATTGTGTATTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2499172 993 + 10077455 ATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCT---ACAAGCA-GGATAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTGCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGATGGAAGA---G-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGAT-TTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCGAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAATTATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTATTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TATATTGTGTATTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5705243 993 + 127223203 ATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG-----TTTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCTCC---ACAAGCA-GGATAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCGCCATGGAAACAATTGTCTGCACTGGGAGTCGTATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACAGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTTTAAGATGGATATGAAAGAATATTTTTTGAGAAATGAGATTATTAACACACCTGCAAGGTGGATGGAAGA-----GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGAT-TTTTTTAATTGCCGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTACATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGATTCAGTGGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTCTTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATGTTAGACAGTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTACATTTTCTGTA----TATATTGTGTATTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1165452 993 - 1799296 ATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGAGAATCTGAAATCGCT---ACAAGCA-GGATAAGAAGCAC------AGTAGAAACTATTCTAGGCAGGAAGTCAATCCTTTCGACT-GTCTGTGCTCCACAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCATTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAGGTTAGACGGATAACTATTTGCATCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAAAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGATGGAAGA---G-GAAAAAAAAGAATAATCAGCTTGAGTTCTTCTTCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAACTCTAGAT-TTTTTTAATTGCTGGTAAGATTTTAATTTGCTCCGAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGATTCAGTGGTAAAATATTATCTGTTAACAGCTGGAACTCATAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTAAAAAATATTATTCTGCAAATTTAAAAGTAAAAGTAAAATGTTATTTGTCTTATTTAATAGGCCTGTGAAAAAA----ATGAGATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACACCTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATTTTCTGTA----TATATTGTGTATTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1748096 986 + 6934359 ATTGCTTCAGCTAACTTACTACAGTTTACATTCCTCTCAGGT----GGGAGAATTGTTGAG------TTTTTTCTTAAGACAGAAAAGCAATTCAGATAATCTGAAATCTCC---ACAAGCA-GAATAAGAAGCAC------AGTAGAAACTATTCAAGGCAGGAAGTTAATCCTTTTGA-----CTGTGCTCCATAGAAACAATTGTCTGCACTGGGAGTCATATGAGGTACGGACAACAGCCAAACCTCTGATCCTCTCGTTTGTGACTCCAGACGAAATTACCAGTCAACTGAGTAATTCAC-TGAGTAAAGTAAACATTTGGCACTGA-AAGAAGTTAGACGGATAACTATTTGCCTCACCATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGTTGTTAAAAGGCCTCTCATCTTGTAAGATGGATATGAGAGAATATTTTCTGAGAAATGAAATTATTAACACACCTGCAAGGTGGATGGAAGA-----GGAAAAAAAGAATAATCAGCTTGAGTTATTCTTCTTGATAAGACAAC-TCACT-AAAAACA------TAAAGAGAAAAATACAAGTTTAAAATAATTAACCAG-AAGAAGGCAA--CTAGAT-TTTTTTAATTGCCGGTAAGATTTTAATTTGCTCCAAGTTGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGATTCGGTGGTAAAATATTATCCGTTAACAGCTGGAACTCAAAAAGGCATAGCACAATGTGAAGATGGAATTTGCTAAAATAAACCATCTGCTGAAAAATATTATTCTGCAAATTTAAAAATAAAGTTAAAATGTTATTTGTCTTATTTAATATGCCTGTGAAAAAA----ACGAAATATTTGAAAAGGAGGTGCTACCTTAATTAGTTCTTTATATTAGACAGTTGGTTACAGTAATGCACTGTAAGGTGCTACATACAAATATTGCTAAATATTCTGTA----TATATTGTGTATTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108108415 973 - 128169293 ATTCCTACAACTAACTTATTACATTTTACATTCCTCTCAGAT----GGGAGAATCATTGAG------ATTTTGCTTAAGACAGAAAAGTAATTCAGATAAGCTGAGATCTCC---ACAAGCA-GGATAAGAAGCGC------AGCAGAAACCATTCTAGGCAGGAAGTCAATCCCTTCAACT-GTCTGTGCTCCATAGAAACAACTTCCTGCACTGGGAGTCATACGAGGTACAGACAACAGCCAAAGTTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCAT-TGAGTAAAGCAAACATTTGGCACTGA-AAGAGGGTAGACAGATAACTATTTGTATCACTATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACTTCTGAATGGAAGATCTTAAAAGGTCTCTCATCTTGTAAAATGGATAGAAAAGAACATTTTCTCAGAAATGAAATTATTAACACACCTGCAAG----CTGGAGGA-----GGAGAAAAAGAATAATCAGCTTGAGCTCTT---CTTGATAAGACCAC-TCACT-AAAAACA------TAAAGAGAAAAATACAATATTAAAATA-------AG-CAGAAGACAACTCTAGAT-TTTTTAAATTGCTGATAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGATTCAGCAGTAAAATATTATTCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGAAATTTGCTAAAAT-AACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAAATAGAGTTAAAACGTTATTTGCCTTATTTAACAGGTCTATGAAAAAC----ATGACATATTCGAAAAGTAGGTGCTACCTTAATCAGTTCCTTATATTAGACAGTTGGTTATAATAATTCAC----AGGTGCTACATATAAATATTTCCAAATATTCTGTA----TATATTGTGTATTTG i calJac3.chr8 C 0 I 102 s saiBol1.JH378145 726086 974 - 18371965 ATTCCCACAAC-AACTTACTACATTTTACATTCCGCTCAGAT----GGGAGAATCATTGAG------ATTTTGCTTAAGACAGAAAAGTAATTCGGATAAGCTGAGATCTTC---ACAAGCA-GG-----------------AGAAGAAACTATTCTAGGCAGGAAGTCAATCCCTTCCACT-GTCTATGCTCCACAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTACAGACAACAGCCAAGCCCCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCAT-TGAGTACAGCAAACATTTGGCACTGA-AAGAGGTTAGACAGATAACTATTTGTATCACTATGTTCATGAAGCTGGAATATTTTCCACTATTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTCAACTTGTAAAGTAGATAGGAAAGAACATTTTCTCAGAAATGAAATTATTAGCACACCTGCAAGGTGTATGGAGGA-----GGAGAAAAAGAATAATCAGCTCGAGCTCTT---CTTGATAAGACTAC-TCACT-AAAAGCA------TAAAGAGAAAAATACAAGATTAAAATAATTAAGCAG-AAGAAGACAACTCTAGAT-TTTTTTAATTGC---TAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACACAATGAGCAATGATATCAC-ACATGATAGATTCAGGAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAACGCATACCACAACGTGAAGATGAAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAGATAAAGTTAAAACGTTATTTGCCTTAGTTAACAGGTCTATGAAAAAA----AGGACATATTTGAAAAGTAGTTGCTACCTTAATTAGTTCTTTATATTAGACAGTTGGTTATAGTAATTCACAGTAAGGTGCTACATATAAACACTGCCAAATTTTCTGTA----TATTTTGTGGATTTG i saiBol1.JH378145 C 0 I 87 s cebCap1.NW_016107540v1 1385630 976 + 3566421 ATTCCTACAACTAACTTATTGCATTTTACATTCCTCTCAAAT----GGGAGAATCATTGAG------ATTTTGCTTAAGACAGAAAAGTCATTGAGATAAGCTGAGATCTCC---ACAAGCA-GGATAAGAAGCAC------AGCAGAAACTATTCTAGGCAGGAAGTCAATCCCGTTAACT-GTGTATGCTCCGTAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTACAGACAACAGCCAAACCTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACTGAGTAATTCAC-TGAGTAAAGCAAACATTTGGCATTGA-AAGAGGTTAGACAGATAACTATTTGTATCGCTATATTCATGAAGCTGGAATATTTTCCACTGCTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTCATCCTGTAAAATGGATAGGAAAGAACATTTTCTCAGAAATGAAATTATTAACACACCTGCAAGGTGTATGGAGGA-----GGAGAAAAAGAATAATCAGCTTGAGCTCTT---CTTGATAAGACTAC-TCACT-AAaaaca------taaagagaaaaatacaagattaaaataaTTAAGCAG-AAGAAGACAACTCTAGAT-TTTTTAAATTGCTGATAAGATTTCAATTTGCTCCAAGATGAAAATAACTCTATTGCTTGTGTTTTAAGGCATATAATGAGCAATGATATCCC-ACACGATAGATTCAGCAGTAAGATATTATCCGTTAACAGCTAGAACT--------CATACCACAATGTGAAGATGAAATTTGCTAAAATAAACCAGCTGCTGAAATATACTATTCTGCAAATTTAAAAATAAAGTTAAAATGTGATTTGCCTTATTTAACAGGTCTATGAAAAAA----ATGACATATTTGAAAAGTAGGTGCTAACTT----AGTTTTTTATATTAGACAG-TGGTTACAGTAATTCACAGCAAGGTGCTACATATAAATACTGCCAAATTTTCTGTA----TATATTGTGTATTTG i cebCap1.NW_016107540v1 C 0 I 83 s aotNan1.NW_018514471v1 1887367 984 - 9267652 ATTCCTACTACTAACTTATTACATTTTACATTGCTCTCAGAT----GGGAGAATCATTGAG------CTTTTGCTTAAGACAGAAAAGTAATTCAGATAAGCTGAGATCTCC---ACAAGCA-GGATAAGAAGCAC------AGCAGTAACTATTCTAGGCAGGAAGTCAATCCCTTCAACT-GTCCATGCTCCATAGAAACAATTTCCTGCACTGGGAGTCATACGAGGTACAGAAAACAGCCAAACCTCTGATCCTCTCATTTGTGATTGCAGAACAAATTTCCAGTCAACCGAGTAATTCAT-TGAATAAAGCAAACATTTGGCACTGA-AAGACGTTAGACAGATAACTATTTGTATCACTATATTCATGAAGCTGGAATATTTTCCACTACTGGTATCACATCTGAATGGAAGATCTTAAAAGGTCTCTTATCTTGTAAAATGGATAGGAAAGAACATTTTCTCAGAAATTAATTTATTAACACACCTACAAGGTGTATGGAGGA-----GGAGAAAAAGAATAATCAGCTTGAGCTCTT---CTTGATAAGACTAC-TCACT-AAAAACA------T--AGAGAAAAATACAAGATTAAAATAATTA---AG-CAGAAGACAACTCTAGAT-TTTTTTAATTGCTGATAAGATTTTAATTTGCTCCAAGATGAAAATAACTATATTGCTTGTGTTTTAAGGCACATAATGAGCAATTATATCAC-ACATGATAGATTCAGCAGTAAAATATTATCCGTTAACAGCTGGAACTCATAAAAGCATAGCACAATGTGAAGATGAAATTTGCTAAAATAAACCATCTGCTGAAAAATACTATTCTGCAAATTTAAAAATAAAGTTAAAACACTATTTGCCTTATTTAACAGGTCTATGAAAAAA----ATGACATATTTGAAAAGTAGGTGCTACCTTAATTAGTTCTTTATATTAGACAGTTGGTTACAGTAATTCACAGTAAGGTGCTACATATAAATACTGCCAAATTTTCTGTA----TATATTGTGTATTTG i aotNan1.NW_018514471v1 I 15 I 149 s otoGar3.GL873564 12742487 943 + 14340318 ATTGCTTCAACTTACTCATTACA-TTTATATTCCACTCAGGT----TGAAGACTTGTTGAA------TATTT--TTAAGAAAG-AGAGTGATGCAAATTTTTTGGGCTCTCC---ACACACA-AGATTA-AGACCC------AGAAGAAACTAGTCTGGGCGTGAAGTCAGTCCATTCAG-----CTGTGTCCCGTAGAAACCACCATCCATGCTGGGAGTCACACAGAGCACAGAC------------------TTGCTCTCTTGGAATTTCAGAAGAAAGTTTTAGTCAACTCAGTAATTCAC-TGAGAACACCAAATATTTAGCACTAATTCGGGGTTAGAGTGATAATCATTTCCACCACCATGTTCATGGAGTTGAAATATTTTCTACTACTGGTATCATAACCAAATAAAGGAACTTACAAGTCTTCTCATCTTCTAAGATGGATATGAGAGAACA---TCTCAGAAATGAAATTA---ACACACTTGCAAGGTATATGGAGA------GAGACAAAAAGATAATCAGCTTGAATTTGTTCTCTT-----GACAAT-TCTCT-AAAAAAAATTTTTTTCAGAGAAAAATGTAAGTTTAAAATAATTAGCCAGAAAGAAGACAAATGTAG---TTTTTAAAATGCTGATAAGATTTTAATTTGTTGCAAGTTGAAAATAACTATATTGCTGGTGTTTTACGGCACATAATGAGCAATTATATCAC-ACGTGATAAATTC-GCAGTAAAATATTATCAATTAACAGTTGGAACTCATAAA-GCATAACATCATGTGAACATGGAA-TTGACAAGAAAGACCATCTGCTGAAAAATACTATTCTGTAAATT------TAAAGTTAAAATGTTATTTGCCTTATTTAATAGATCTGTGAAAATG----ATGAGATATTTT-TAAGTAAGTGTTACCTTAATTA-TTTACTACATTTGACAGTTTGTTATAG-----CACAATAAGGGGCTCCATGTAAGTATTGCTAAATTTTCCATA----TAGATCATATAGTTA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51759845 1001 - 55844845 ATTCCTTCAACTAACTCG-TACATTTTATATTTCTATCAGCTTAGAAAGAGACTTGTTGAGGTGTTTGTTTTTCTTAAAACAGAAAAGTAATCCAGATTATCTGCGATCTGTCAGACAAGAGTGGACACAGAGCACTCTCTGGGCAGAAACTAGTCTAAACATGAAGTCAATGCTTTCAACTCTTCTGTGCTCCAAAGACACGATGGTCTACACTTGGAGT---------TACAGAAAATAGCCCAA------AGTCTACCATTTGGAATTTCAGAAAAAG--ACCAGTCAACTGAGTCATGCTCTTGAATACACCAAACATTTGCCAATAG-A----GCTTGAGAGAGATCCATTTGTTTCACAGTATCCATGAAGTTGGA--TTTTGCCACTACTGCTATTATATCT-ACTAGAAGAACTTAAAGGAT-TCTCAGCTGGTAAGCCAGATAGGAAAGATTATTTCCTCAGAAATGGAACTATTAACCCACCTGCAAATTGAAGGCGGGGTAGG-GAGGGGAAGCAATAATCAGCCTGAATTTTTAGTCTTCACAAAATAATAACATTAAAAAATA------TACAGAGAAAAACACAAGTTTAAAATAATTAACCAG-AAGAAGACAACTGTAGATTTTTTTAAAATGCTGATAAGATTTTAATTTGCTCGAAGTTGAAAATAACTATATTACTGGTGTTTTAAGGCCCATAATGAGCAATTATATCAC-ACATCATAGATTCAGCAGTGAAATATTATCAGTTAACAGCTGGAACTCATAAAAGCATAGCACAGTGTGAACATGAAGTTTGTTAGAATAAACCATCTGCTGAAAAATAGTATTCTGCAAATT-AAAAATAAAGTTAAAACATTATTTGCCTTATTTAATAGATTTGTGAAAAAAAATGATGAGATAAT-GAAAAGTAGGTGCTACTTTAATTAATTTCCTGTATTACACAATTGGTTACAGTAGTGTACAGTGTGGAGCTGCATATAATTATTGCTAAATTCCTCATACATGTATATTGTGCAttca i canFam3.chr18 C 0 C 0 a score=-2234.000000 s hg38.chr22_KI270732v1_random 11610 3 + 41543 GCT- s panTro5.chr2B 114757385 3 - 133216015 GCT- i panTro5.chr2B C 0 C 0 s panPan2.chr12 82700246 3 - 135337776 GCT- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 126144 3 + 150013 GCT- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40159921 3 - 81552678 GCT- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133468001 3 - 185818997 GCT- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297681 3 + 192294377 GCT- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779596 3 + 3123512 GCT- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500165 3 + 10077455 GCT- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706236 3 + 127223203 GCT- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166445 3 - 1799296 GCT- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1749082 3 + 6934359 GCT- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109490 1 - 128169293 g--- i calJac3.chr8 I 102 C 0 s saiBol1.JH378145 727147 1 - 18371965 g--- i saiBol1.JH378145 I 87 C 0 s cebCap1.NW_016107540v1 1386689 1 + 3566421 T--- i cebCap1.NW_016107540v1 I 83 C 0 s otoGar3.GL873564 12743430 3 + 14340318 GCT- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51760846 3 - 55844845 -gta i canFam3.chr18 C 0 C 0 e aotNan1.NW_018514471v1 1888351 149 - 9267652 I a score=1364092.000000 s hg38.chr22_KI270732v1_random 11613 136 + 41543 TAAATTATTTG-----AAATTTTATAGTTAAAATAATAAATGTATATTTAAATGTTATGACACAAATTGCAAATACACCTTTAAAA-----------AGCGTCTTACACTCTA---AATATTATTTGTCACCTATATATTTGTCTTTTCTCTATA s panTro5.chr2B 114757388 128 - 133216015 TAAATTATTTG-----AAATTTTA----TAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAA-----------AGCGTCTTACACTCTA---AATATTATTTGTCACATATA----TGTCTTTTCTCTATA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82700249 136 - 135337776 TAAATTATTTC-----AAATTTTATAGTTAAAGTAACAAATGTATACTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAA-----------AGCGTCTTACACTCTA---AATATTATTTGTCACGTATATATTTGTCTTTTCTCTATA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 126147 136 + 150013 TAAATTATTTG-----AAATTTTATAGTTAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAA-----------AGCGTCTTACACTCTA---AATATTATTTGTCACCTATATATTTGTCTTTTCTCTATA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40159924 131 - 81552678 TAAATTATTTG-----AAATTTTATAGTTAAAGTAACAAATGTATATTTAAATGTTTTGACAGAAATTGCAAATATACCTTTAAAA-----------AGCGTCTTACACTCTA---AATATTATTTGTCACATATATATTTGTCTT-----TATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133468004 139 - 185818997 TAAATTATTTG-----AAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTA---AGTATTATTTGTCATATATAAATTTGTCTTTTCTCTACA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297684 139 + 192294377 TAAATTATTTG-----AAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTA---AGTATTATTTGTCATATATAAATTTGTCTTTTCTCTACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779599 139 + 3123512 TAAATTATTTG-----AAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTA---AGTATTATTTGTCATATATAAATTTGTCTTTTCTCTACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500168 139 + 10077455 TAAATTATTTG-----AAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTA---AGTATTATTTGTCATATATAAATTTGTCTTTTCTCTACA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706239 139 + 127223203 TAAATTATTTG-----AAATTTTA----TAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTA---AGTATTATTTGTCATATATATATTTGTCTTTTCTCTACA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166448 139 - 1799296 TAAATTATTTG-----AAATTTTA----TAAAGTAACAAATGTGTATTTAAATGTTTTGACACAAATTGCAAATATACCTTTAAAAAG----CTTTCAGCGACTTACACTCTA---AATATTATTTGTCATATATAAATTTGTCTTTTCTCTACA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1749085 143 + 6934359 TAAATTATTTG-----AAATTTTATAGTTAAAGTAACAAATGTATATTTAAATGTTTTGACACAAATTGCAAATACACCTTTAAAAAG----CTTTCAGCGACTTACACTCTA---AGTATTATTTGTTATATATATATTTGTCTTTTCTCTACA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109491 141 - 128169293 taaa--atttg-----aaattttatagttaaagtaacaaatgtatatttaaattttttGACATGAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTA---AATATTATTTGTCATATATACATTTGTCTTTTCTCTATA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727148 142 - 18371965 taaattatttG-----GAATTTTATAGTTAAAGTAACAAAT-TACATTTAAGTCTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTA---AATATTATTTGTCATATATATATTTGTCTTTTCTAGATA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1386690 140 + 3566421 TAAATTATTTG-----AAATTTGATAGTTAAAGTAACAAAT-TATATTTACATTTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTG---AATATTATTTGTCATATAT--ATTTGTCTTTTCCGTATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888500 143 - 9267652 TAAATTATTTG-----AAATTGTATAGTTAAAGTAACAAATGTATATTTAAATTTTTTGACATAAATTGCAAATGTATCTTTATAAGG----TTTTCAGCAACTTACACTCTA---AATATTATTTGTCATATACATATTTGTCTTTTCTCTATA i aotNan1.NW_018514471v1 I 149 C 0 s otoGar3.GL873564 12743433 138 + 14340318 --TGTTATTTG-----AAATTTCA----TA---CAATAAATGCATATTTAGATTGCTTGATGCAAATTGTGAATCTACTATTATAAAGCTTTCTTTCAGTAACTTGTATTCTG---AACAAAATTACTTATAGATATATTTGTTTTTACTCTGGA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51760849 149 - 55844845 taaattatttgaagataaatttcatagttaaggaaataaatgcatattcaaagtttttactacatattgcaaatatagctgtataaag----gtttcaacagtttacattctaggcagaaatattaatcccacat--gtctgtcttctctctata i canFam3.chr18 C 0 I 193 a score=384026.000000 s hg38.chr22_KI270732v1_random 11749 38 + 41543 GGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT s panTro5.chr2B 114757516 38 - 133216015 GGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82700385 38 - 135337776 GGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 126283 38 + 150013 GGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40160055 38 - 81552678 GGAAAGTTTAAATTTTTCCCTTGAAGCTTTAATTATTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133468143 38 - 185818997 GGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67297823 38 + 192294377 GGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779738 38 + 3123512 GGAAACTTTCAATTTTTCCCTTAAAACTTCAATTATTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500307 38 + 10077455 GGAAACTTTCAATTTTTCCCTTGAAACTTCAATTATTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706378 38 + 127223203 GGAAACTTTCAATTTTTCCCTTGAAACTTCAATTGTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166587 38 - 1799296 GGAAACTTTCAGTTTTTCCCTTAAAACTTCAATTATTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1749228 38 + 6934359 AGAAACTTTCAATTTTTCCCTTGAAACTTCAATTATTT i colAng1.NW_012115910v1 C 0 I 1034 s calJac3.chr8 108109632 38 - 128169293 GGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727290 38 - 18371965 GGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1386830 38 + 3566421 GGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888643 38 - 9267652 GGAAAGTTTAAATTTTTCCCTTGAGGCTTCAATTATTT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12743571 37 + 14340318 GGTAAGTTTAAA-TTTTCCCCCATAGTTTTGATAATTT i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51760998 193 - 55844845 I a score=443569.000000 s hg38.chr22_KI270732v1_random 11787 56 + 41543 CAGTCTAT----AAAACAAACTGATGATGTACAAATTAACAGGAAAAA---AAGGTTTACAGA s panTro5.chr2B 114757554 55 - 133216015 GAGTCTAT----Caaacaaactgataatgtacaaattaacagg-aaaa---aaggtttacaga i panTro5.chr2B C 0 I 6 s panPan2.chr12 82700423 56 - 135337776 GAGTCTAt----aaaataaactgataatgtacaaattaacaggaaaaa---aaggtttacaga i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 126321 56 + 150013 CAGTCTAt----aaaacaaactgataatgtacaaattaacaggaaaaa---aaggtttacaga i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40160093 55 - 81552678 GAGTCTAt----aaaacaaactgataatgtacaaattaacagg-aaaa---aaggtttgcaga i nomLeu3.chr19 C 0 I 6 s rheMac8.chr3 133468181 55 - 185818997 GAATCTAT----AAAACAAACTGATAATGTACAAATTCACAGA-AAAA---AAGGCTTACAGA i rheMac8.chr3 C 0 I 3 s macFas5.chr3 67297861 55 + 192294377 GAATCTAT----AAAACAAACTGATAATGTACAAATTCACAGA-AAAA---AAGGCTTACAGA i macFas5.chr3 C 0 I 3 s macNem1.NW_012011522v1 2779776 55 + 3123512 GAATCTAT----AAAACAAACTGATAATGTACAAATTCACAGA-AAAA---AAGGCTTACAGA i macNem1.NW_012011522v1 C 0 I 3 s cerAty1.NW_012000909v1 2500345 55 + 10077455 GAATCTAT----AAAACAAACTGATAATGTACAAATTCACAGA-AAAA---AAGGCTTATAGA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706416 55 + 127223203 GAATCTGT----AAAACAAACTGATAATGTACACATTCACAGA-AAAA---AAGGCTTACAGA i chlSab2.chr21 C 0 I 3 s manLeu1.NW_012105809v1 1166625 55 - 1799296 GAATCTAT----AAAACAAACTGATAATGTACAAATTCACAGA-AAAA---AAGGCTTACAGA i manLeu1.NW_012105809v1 C 0 I 3 s calJac3.chr8 108109670 55 - 128169293 GCGTTTAT----AAAACAAACTGATAATGTACAAATTAATATG-TGAA---AAGGCTTACAGA i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 727328 55 - 18371965 CAGTTTAT----AAAACAAACTGATAATGCAAAAATCAATATG-TGAA---AAGGCTTAGAGA i saiBol1.JH378145 C 0 I 6 s cebCap1.NW_016107540v1 1386868 55 + 3566421 GAGTCTAT----AAAACAAACTGATAACGTACAAATTAATATG-TGAA---AAGCCTTACAGA i cebCap1.NW_016107540v1 C 0 I 6 s aotNan1.NW_018514471v1 1888681 55 - 9267652 GAGTCTAT----AAAACAAACTGATAATGTACAAATTAATATG-TGAA---AAGGCTTCCAGA i aotNan1.NW_018514471v1 C 0 I 3 s otoGar3.GL873564 12743608 62 + 14340318 GAGTTTGTTTGAAAAAAAAATTAGTAATACACAGATTAATTGG-AAAAAGCAGGGCTTACAAA i otoGar3.GL873564 C 0 C 0 e colAng1.NW_012115910v1 1749266 1034 + 6934359 I e canFam3.chr18 51760998 193 - 55844845 I a score=716931.000000 s hg38.chr22_KI270732v1_random 11843 86 + 41543 TATGTGCGCAAGTATGCACTTGGAGTTTACGTAatatatatataaatat----------atctatacaaatatttgtatattataaatagatatac s panTro5.chr2B 114757615 84 - 133216015 tatgtgcacaagtatgcacttggagtttacata--atatacataaatat----------gtatatacaaatatttgtatattataaatcaatatac i panTro5.chr2B I 6 C 0 s panPan2.chr12 82700479 83 - 135337776 tatgtgtacaagtatgcacttggagtttacata--atatatat-aatat----------atctatacaaatatttgtatattataaatatatatac i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 126377 84 + 150013 tatgtgcacaagtatgcacttggagtttacata--atatatataaACat----------atctatacaaatatttgtatattataaatagatatac i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40160154 82 - 81552678 tatgtgcacaagtatgcacttggACTTTACATt--atatata--aatat----------acatatacaaatatttgcatattataaatagatatac i nomLeu3.chr19 I 6 C 0 s rheMac8.chr3 133468239 94 - 185818997 TATGTGCACCAGTATGCACTTGGAGTTtacata--atatatataaatatatatacacaaatatatacaaatatttgtatattataaacatatatac i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67297919 94 + 192294377 TATGTGCACCAGTATGCACTTGGAGTTtacata--atatatataaatatatatacacaaatatatacaaatatttgtatattataaacatatatac i macFas5.chr3 I 3 C 0 s macNem1.NW_012011522v1 2779834 94 + 3123512 TATGTGCACCAGTATGCACTTGGAGTTtacata--atatatataaatatatatacacaaatatatacaaatatttgtatattataaacatatatac i macNem1.NW_012011522v1 I 3 C 0 s cerAty1.NW_012000909v1 2500400 94 + 10077455 TATGTGCACAAGTATGCACTTGGAGTTtacata--atatatataaatatatatacacaaatatatacaaatatttgtatattataaacatatatac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706474 94 + 127223203 TATGTGCACAAGTATGCACTTGGAatttacata--atatataaaaatatatatccgcaaatatatacaaatatttgtatattataaacatatatac i chlSab2.chr21 I 3 C 0 s manLeu1.NW_012105809v1 1166683 94 - 1799296 TATGTGCACCAGTATGCACTTGGAGTTtacata--atatatataaatctatatacacaaatatataccaatatttgtatattataaacatatatac i manLeu1.NW_012105809v1 I 3 C 0 s colAng1.NW_012115910v1 1750300 94 + 6934359 TATGTGCACAAGTATGCACTTGGTGTTtacata--atatatataaatatatatacgcaaatatatacaaatatttgtatattataaacatatatac i colAng1.NW_012115910v1 I 1034 C 0 s calJac3.chr8 108109728 94 - 128169293 TATGTGCACACGTATGCACTTGGAGTTTACAAA--atatatatgaatatacatacacaaatatatacaaatatttctatactgtaaatatatatgt i calJac3.chr8 I 3 I 2 s saiBol1.JH378145 727389 93 - 18371965 TATGTGCACACATATGCACTTGGAGTTTACACA--atatatatgaatata-atacacaaatatatacaaatatgtctatactgtatatatatataC i saiBol1.JH378145 I 6 C 0 s cebCap1.NW_016107540v1 1386929 94 + 3566421 TATGTGCACACATATGCACTTAGAGTTTACACA--atatatatgaatatatatacacaaatatatacaaatatttctatactgtaaatatatatat i cebCap1.NW_016107540v1 I 6 I 4 s aotNan1.NW_018514471v1 1888739 94 - 9267652 TAGGTGCACACATATGCACTTGGAGTTTACACA--atataaatgaatatatatagacaaatatatataaatatttctatactgtaaatatatatat i aotNan1.NW_018514471v1 I 3 I 2 s otoGar3.GL873564 12743670 19 + 14340318 ---------------------------------------------------------------------------TTTTATTATGTGTTCATAT-- i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51760998 193 - 55844845 I a score=1060186.000000 s hg38.chr22_KI270732v1_random 11929 156 + 41543 aaatatatgctatata--tataAAAACTCCAGGAAAGGCAAGGTAGTCAACACGCCtatgctgtcttgaggttacagaaaacacagagctgtaggttggtaaatcaggctttgcggaagacaggtgatgacaaggaagaaagaggagcctgacagcag s panTro5.chr2B 114757699 158 - 133216015 aaatatatactatatatgtataAAAACTCCAGGAAAGGCAAGGTAGTCAACACGCCtatgctgtcttgaggttacagaaaacacagagctgtactttgctaaatcaggctttgcagaaggcaggtgacgacaaggaagaaagaggagcctggcagcag i panTro5.chr2B C 0 C 0 s panPan2.chr12 82700562 156 - 135337776 aaatatatactcttta--tataAAAACTCCAGGAAAGGCAAGGTAGTCAACACACCtatgctgtcttgaggttacagaaaacacagagctgtaggttggtaaatcaggctttgcagaagacaggtgacgacaaggaagaaagaggagcctggcagcag i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 126461 156 + 150013 aaatatatgctatata--tataAAAACTCCAGGAAAGGCAAGGTAGTCAACACGCCtatgctgtcttgaggttacagaaaacacagagctgtaggttggtaaatcaggttttgcggaagacaggtgacgacaaggaagaaagaggagcctggcagcag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40160236 156 - 81552678 aaatatatactatata--tataCAAACTCCAGGAAAGGCAAGGTAGTTAACACGTCtatgctgtcttgaggttacagaaaacacagagctgtacgttggtaaatcaggctttgcggaagacaggtgacgacaaggaagaaagaggagcctggcagcag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133468333 151 - 185818997 aa-tatatactatata--tct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaa--acagagctgtatgttggtaaatcagactttgcggaagacagctgattatgaggaaggaaaaggaacctgcaagcag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298013 152 + 192294377 aagtatatactatata--tct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCTAGCCTGTTTTGAGGTTACAGaaa--acagagctgtatgttggtaaatcagactttgcggaagacagctgattatgaggaaggaaaaggaacctgcaagcag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2779928 152 + 3123512 aagtatatactatata--tct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaa--acagagctgtatgttggtaaatcagactttgcagaagacagctgattatgaggaaggaaaaggaacctgcaagcag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500494 154 + 10077455 aagtctatactatata--tct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgccgttttgaggttacagaaaacacagagctgtatgttggtaaatcagactttgcggaagacaggtgattatgaggaaggaaaaggaacctgcaagcag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706568 154 + 127223203 aagtatatactatata--tct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaaacacagagctgtatgttggtaaatcagactttgcggaagacaggtgattaggaggaaggaaaaggaacctgcaagcag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166777 154 - 1799296 aagtatatactatata--tct--aAACTCCAGGAAAGGCAAGGTAGTTAATACGTCtatgctgttttgaggttacagaaaacacagagctctatgttggtaaatcagactttgcggaagacaggtgattatgaggaaggaaaaggaatctgcaagcag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750394 153 + 6934359 aaatatatactatata--tat--aAACTTCAGGAAAGGCAAGGTAGTTGACACATCTATGCTATTTTGAGGTTTCAGAAAACACAGAGCTGGatgttggtaaatcagactttgtggaagacaggtgattatgaggaaggaaaaggaa-ctgcaagcag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109824 140 - 128169293 aaatatatactatata--tTA--AAGCTCCAGGAAAGGCAACATAGTTAACACTTCCACGCTG--TTGAGGTTAGAGAAAACACAGAGCTGtatgttggcaaatgagg------------caggtgacagtgaggaaggaagaggaggctggcagcag i calJac3.chr8 I 2 C 0 s cebCap1.NW_016107540v1 1387027 142 + 3566421 aaatatatactatata--taA--AAACTCCAGGAAAGGCAAGATAGTTAACActtctatgctgtcttgaggttagagaaaacacagagctgtatgttggtaaatcagg------------caggtgacggtaaggaaggaagaggaggctggcagcag i cebCap1.NW_016107540v1 I 4 C 0 s aotNan1.NW_018514471v1 1888835 142 - 9267652 aaatatatactatata--taA--AAACTCCAGGAAAGGCAAGATAATTAACActtctatgctgtcttgaggttagagaaaacatagagctgtatgttggtaaatcagg------------caggtgatggtaaggaaggaagaggaggctggcagcag i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 12743689 20 + 14340318 ----------------------------------------------------------------------------------------------GTTgg-agatctggct-------------------------------------------agcaa i otoGar3.GL873564 C 0 C 0 e saiBol1.JH378145 727482 0 - 18371965 C e canFam3.chr18 51760998 193 - 55844845 I a score=2657906.000000 s hg38.chr22_KI270732v1_random 12085 272 + 41543 aggtggt----cttgttacatggatgaaacatcacagggagcagccctcctcttgggaagtatagataggaaatggt--ttttagaaatgtaaacgtgccaggctc--agttaatctttcctaaacccaaacaagggaataactcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatctcccccaacaaacacagcttttcagctattcttgtagaagaagctatctccagtcttccgagtagccatcttgaaatatgtcaaaa s panTro5.chr2B 114757857 271 - 133216015 aggtggt----cttgttacatggatgaaacctcacagggagcagccctcctcttgggaagtaaagataggaaatggt--ttttagaaatgtaaacgtgccagactc--agttaatctttcctaaacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaacacagcttttcagctattcttgtagaagaagctatttccagtcttctgagtagccatcttgaaatatgtcaaaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82700718 271 - 135337776 aggtggt----cctgttacatgggtgatacctcacagggagcagcccccctcttgggaagtatagataggaaatggt--ttttagaaatgtaaacgtgccagactc--agttaatcttttctaaacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaaaagaagtct-ccccaacaaacacagcttttcagctatttttgtagaagaagctatctccagtcttctgagtagccatcttgaaatatgtcaaaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 126617 271 + 150013 aggtggt----cttgttacatggatgaaacctcacagggagcagccctcctcttgggaagtatagataggaaatggt--ttttagaaatgtaaacgtgccagactc--agttaatctttcctaaacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaacacagcttttcagcttttcttgtagaagaagctatctccagtcttccgagtagccatcttgaaatatgtcaaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40160392 268 - 81552678 aggtggt----cttattacatggatgaagcctcccagggagaagccgtcctcttgggaagtatagataggaaatggt--ttttagaaatttaaacgtgccagactc--agttaatctttcctaaacccaga-aagggagtatctcagg--aaacctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaacacagcttttcagctattcttgtagaagaagctatttccagtcttccaagtagccattttcaaataagtcaaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133468484 272 - 185818997 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagatagcaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatgttgaaatatgtcaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298165 272 + 192294377 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagatagcaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780080 272 + 3123512 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctctccttgggaagaataggtagcaaatgat--ttttagaactttaaacgtgtcagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500648 272 + 10077455 aggtgat----cttgctttgtggatgaaacctcacagggagcagccctccccttgggaagaatagataggaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcttagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctcttccaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctatttcctgtcttccgaggagccatcttgaaatatgtcaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706722 272 + 127223203 aggtggt----cttgttatgtggatgaaacttcacagggagcagccctccccttgggaagaataggtaggagatggt--ttttagacctttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgtagattttctctacaaatgcaaatct-ccccaacaaagctaggttttcagctgttcttgtagaagaagctatttcctgtcttccgagtagccatcttgaaatatgtcaaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1166931 272 - 1799296 aggtggt----cttgttatgtggatgaaacttcacagggagcagctctccccttgggaagaatagataggaaatgat--ttttagaactttaaacgtgccagactc-aagttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcactgcagattttctctacaaatgcaaatct-ccccaacaaagctagattttcagctattcttgtagaagaagctatttcctgtcttccgagtagccatcttgagatatgtcaaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750547 272 + 6934359 aggtggt----cttgttacgtggatggaacttcacagggagcagccctccccttgggaagaatacataggagatggt--ttttagacctttaaacgtgccagactc-aagttaatctttcctagacccaaacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagctaggttttcagctattcttgtagaagaagctattccctgtcttccgagtagccatcttgaaatatgtcaaaa i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108109964 270 - 128169293 aggtggt----cttgttatgtgtatgaagcctcacagagagcagcccaccccttgggaagaatagatgggaaatggt--ttttagacctttataggtgccaaactc--agttaatcttccctagacacagacaaaggagtatctcagggaaagcctgtctataacaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcttttcagctacacttgtagaagaagctgttt-cggtcttgtgagtagccatcttgaaatatgtcaaat i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727482 268 - 18371965 agggggt----cttgccatgtgtatgaagcctcacagggagcagccctccccttggaaagaatagatgggaaatgg---ttttagacctttaaaggtgccaaactc--agttaatctttcctagacccagataagggagtatctcaggcaaagcctgtctttatcaaaacagattttc-ctgcaaatgcaaatct-cgccaacaaagacagcttttcagctactcttgtggaagaagctgttt-ctgtcctctgagtagccatcttgaaacatgtcaaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387169 270 + 3566421 aagtggt----cttgttatgtgtatgaagcctcacagggagcagccctccccttgggaagaacagatggaaaacggt--ttttagacctttaaaggtgccaaactc--agttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcttttcatcttctcttgtagaagaagctgttt-tggtcttctgtgtagccatcttgaaatatgtcaaaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1888977 269 - 9267652 agatggt----cttgttatgtgtatgaagcctcacagggagcagccctcccctt-gaaagaacagatgggaagtggt--ttttagacctttaaatgtgccaaactc--ggttaatctttcctagacccagacaagggagtatctcagggaaagcctgtctatatcaatgcagattttctctacaaatgcaaatct-ccccaacaaagacagcatttcagctactcttgtagaagaagctgttt-gggtcatctgagtagccatcttgaaatacgtcaaaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12743709 261 + 14340318 aggtggttggccttgttatatggatgaaacctcgtagtcgg-agccctc------ggagtgcaggacggcacctgctcctgtcagacctttaaaggtgtcagactctcagctattctttcccacaacaagac-aggaagtgtctcagagaaagcctggctacatcaatgaagaatttctc-acagatacaaacctgccctataaaagacagctttccagctgttctagga----------ttgccagcgctctgaatagccaccttgaaatatgtcaaaa i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51760998 193 - 55844845 I a score=2332281.000000 s hg38.chr22_KI270732v1_random 12357 282 + 41543 agctggcc--------aggcgcacgcctgtaatcccagcactttgggaggctgaag------tgggtagatcacctgaagtcaggagttggagaccagcctgaccaacatggtgaaaccccgtctctactaaatacaaaaaattagccgagtgtggtggtgcatgcctgtaatctcagctacttgggaggctgagctaggagaactacttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcactctagcctgggcaacaaaagcaaaagtccatctc---------aaaa s panTro5.chr2B 114758128 283 - 133216015 agttggcc--------gggcgcacgcctgtaatcccagcactttgggaggctgaag------tgggtagatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaaccccatctctactaaatataaaaaattagccgagtgtggtggtgcatgcctgtaatctcagctacttgggaggctgagctaggagaataacttgaccct-gggaggctgaggttgcagtgagccaaaattgtgccattgcactccagcctgggcaataaaagcaagactccatctca--------aaaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82700989 280 - 135337776 agctggcc--------aggcgcacgcctgtaatcccaacactttgggaggctgaag------tgggtagatcatctgaagtcaggatttggagaccagcctgacctacatggtgaaatcccatctctactaaatac-aaaaattagctgagtgtgttggtgcatgactgtaatctcagctacttgcgaggctgagctcggagaattacttgaccct-gggagggtgaggttgcagtgagccaagattgtgccattgtactctagcctgggcaataaaaacaaaactcaatctc----------aaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 126888 280 + 150013 agctggcc--------aggcgcacacctgtaatcccagcactttgggaggctgaag------tgggtagatcacctgaagtca-gagttggagaccagcctgaccaacatggtgaaaccccgtctctactaaatacaaaaaattagccgagtgtggtggtgcatgcctgtaatctcagctacttgggaggctgagctaggagaat-acttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcactctagcctgggcaataaaagcaaaactccatctc---------aaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40160660 286 - 81552678 agttggcc--------aggcgcacacctgtaatcccagcactttgggaggctgaac------tgggtagatcacctgaagtgaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctactaaatacaaaaaattagccgagtgtggtggtgcatgcctgtattctcagctacttgggaggctgagctagaagaattccttgaccct-gggaggctgaggttgcagtgagccaagattgtgccattgcactccagcctgggcaataaaagcaaaactccatctca-----aagagaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133468756 296 - 185818997 agttggccccgtgcagtggtgcacccctgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggcagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctca-t---taaaaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298437 296 + 192294377 agttggccccgtgcagtggtgcacccctgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggcagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctca-t---aaaaaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780352 296 + 3123512 agttggccccgtgcagtggtgcacccctgtaatcccagcaccttgggaggctgagg------tgagtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggaagcacatgcctgtaatcttagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgcaattgcactccagcctgggcaacaaaagcaaaactccgtctca-t---aaaaaaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2500920 299 + 10077455 agttggctccgtgcagtggtgcacccctgtaatcccagcaccttgggaggctgagg------tgggtggatcaccagaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggcggcacatgcctgtaatcccagctacttgggaggctgaggcaggagagttgcttgactctggggaggcagaggttgcaatgagctgagactgtgctattgcactccagcctgggcaacaaaagcaaaactccgtctca-taaaaaaaaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5706994 293 + 127223203 agttggccccgtgcagtggtgcacccctgtaatcccagcactttggaaggctgagg------tgggtggatcacctgaggtcaggagtttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagacaagtatggcggcacatgcctgtaatctcagctacttgggaggctgaggcaggaaaattgcttgactct-gggaggcagaggttgcagtgagctgagactgtgctattgcactccagcctgggcaacaaaagcaaaactccgtctca-t-----aaata i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167203 285 - 1799296 agttggcgcagtgca----------cgtgtaatcccagcaccttgggaggctgagg------tgggtggatcacctgaggtcaggagcttgagatcagcctgaccaacatgatgaaaccccgtctctactaaatacaaaaaattagataagtatggcgccacatgcctgtaatcttagctacttgggaggctgaggcaggagaattgcttgactctggggaggcagaggttgcagtgagctgagactgtgctattgcactccagcctggggaacaaaagcaaaactccgtctcatt-----aaaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1750819 299 + 6934359 agttggccccgtacagtggtgcacccctgtaatcccagcacttggggaggctgagg------tgggtggatcatctgaggtaaggagtttgagatcagcctgaccaacatgatgaaaccccgtctccactaaatacaaaaaattagacaagtatggtggcacatgcctgtaatcttagctacttgggaggctgaggcaggagaattgcttgactctggggaggcagaggttgcagtgagctgagagtgtgctattgcactccagcctgggcaacaaaagcaaaactccttctca-taaaaaaaata i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110234 290 - 128169293 ggtgtgccgagtgcagcgg------tctgtaatcccagcactttgggaggcagaggccgagatgggtggatctcctgaggtcaggggttggagatctgcactaccaacatagtaaaaccctgcctctactaaatacaaagaatgagctaggcataatggtaaatgcctgtaatctcagctacttgagagtctgaggcaggagaatcccttgaa-ct-gggaggtggaggttgcagtgagctgaaattgtgccaatgcactccagcctggacaactagagcaaaactctgtctca--------aaaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 727750 291 - 18371965 ggtgtgccgggtgcagcag------cctgtaatcgcagcacttagggaggcagaggccgagatgggcagatctcctgaggtcaggagttcgaggccagccctaccaacatagtaaaaccctgcctctactaaatacaaagactgagccaggcatagtggtacacgcctgtagtctcagctacttgagagtctgaggcaggagaatccattgaacct-gggaggtggaggttgcagtgcgctgaaattgtgccactgcactccagcctgggcaaccagagcaaaactctgtctca--------aaaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387439 290 + 3566421 ggtgtgcc-agtgcagtgg------cctgtaatcccagcacttcgggaggcagaggccgagatgggcggatctcctgaggtcaggagttcgagaccagccctaccaacatagtaaaaccctgcctctactaaatacaaagaatgagccaggcatagtggtacaagcctgtaatctcagctgcttgagagcctgaggcaggagaatccctcgaacct-gggaggtggaggttgcagtgagctgaaattgtgccactgcactccagcctgggcaactagagcaaaactccgtctca--------aaaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1889246 291 - 9267652 ggtgtgcctggtgcagcgg------cctgtaatctcagcccttcaggaggcagaggccgagatgggtggatctcctgaggtcaggagttcgagaccagccctaccaacatagtaaaaccctgcctctactaaatacaaagaatgagccaggcatagtggtacatgcctgtaatctcagctacttgagagtctgaggcaggagaatcccttgaacct-gggaggtggaggttgcagtgagctgaaattgcgccactgcacttcagcctgggcaactagagcaaaacactgtctca--------aaaa i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12743970 0 + 14340318 C e canFam3.chr18 51760998 193 - 55844845 I a score=951651.000000 s hg38.chr22_KI270732v1_random 12639 111 + 41543 aaaa-----tg-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAAT-----CTTTTCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG s panTro5.chr2B 114758411 116 - 133216015 aaaa-----aa-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAATCTTTACTTTTCTGTGGAG-AAAACATAGGTGTGATTTGTAG----TG i panTro5.chr2B C 0 C 0 s panPan2.chr12 82701269 116 - 135337776 aaaa-----tg-catttttgggta--atattttgagtatctttaCCTCCATATGTACAATAAATAATATTGTGATTTTTAATCTTTACTCTTCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127168 111 + 150013 aaaa-----tg-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAAT-----CTTTTCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40160946 116 - 81552678 aaaa-----tg-tattttagggta--atattttgagtatctttaCCTCCATATGTACAATAAATATTATTGTGATTTTTAATCTTTACTCATCTGTGGAG-AAAACACAGGTGTGATTTCTAG----TG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133469052 115 - 185818997 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298733 115 + 192294377 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780648 115 + 3123512 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTGTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501219 115 + 10077455 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTCTGTAGAGAAAAAAACAGGTGTGATTTCTAG----TG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707287 117 + 127223203 acaa-----tg-tattttagggta--atattttgagtttgtttaCCTCCATATATACAATAACTACTATTATGATTTTTAATCTTTACTCTTCTGTGGAGGAAAAAACAGGTGTGACTTCTAG----TG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167488 115 - 1799296 aaaa-----tg-tattttagggta----aatttgagtttgtttacctccaTATGTACAATAACTATTATTGTGATTTTTAATCTTTACTCTTCTGTGGAGAAAAAAACAGGTGTGATTTCTAG----TG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751118 117 + 6934359 aaaa-----tg-cattttagggta--atattttgagtttgtttaCCTCCATATGTACAATAACTGTTATTATGATTTTTAACCTTTACTCTTCTGTGGAGAAAAAAACCGGCGTGATTTCTAG----TG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110524 116 - 128169293 aaaa-----ag-tattttagggtaaaatattttgggtttctttaCCTCCATACGTACATTAACTACTATTGTAACTTTTAATTTTTACTCTTCTGTAGAG-AAAAAACAGGTGTGATTTCTAG------ i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728041 121 - 18371965 aaaagggaggg-tattttagggtaaaatattttgggtttctttaCCTCCATATGTACATTAACCATTATGATGACTTTTAATCTTTACTCTTCTGTAGAG-AAAAAATAGGTGTGATTTCTAG------ i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1387729 124 + 3566421 aaaaaaaaaagttattttagggtaaaatattttgggtttctttaCCTCCATACGTACATTAACTATTATTGTAACTTTTAATCTTTACTCTTCTGTAGAG-AAAAAACAGGTGTGATTTCTAGTG---- i cebCap1.NW_016107540v1 C 0 I 246 s aotNan1.NW_018514471v1 1889537 119 - 9267652 caaa----ggg-tattttagggtaaaatattgtgggtttcttTGCCTCCATACGTACAttaactattattgtaacttttaatctttacttttCTGTAGTG-AAAACACAGGTGTGATTTCTAG--TG-- i aotNan1.NW_018514471v1 C 0 I 243 s otoGar3.GL873564 12743970 98 + 14340318 aaag-----ta-tatttgtgagtgaaatagttagtttgcattcaTCTCCATGCCAACAATGAATG---------------------GCCATTGTGTGAGAAAAGACATGGGCGTGATTTCTGG----TG i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51760998 193 - 55844845 I a score=486774.000000 s hg38.chr22_KI270732v1_random 12750 98 + 41543 TAGCTGAACAT------CGTTTATTTGACAATATTGCACTtgtgtgtgggtgtgtg------cgtg---------------------tgtAGCTACTCTTTAATTT---------------TGTTCTGACATAATGATT----A------GATATT s panTro5.chr2B 114758527 97 - 133216015 TAGCTGAACATCA----CGTTTA-TTGAAAATATTGCACTtgtgtgtgagtgtgt--------gtg---------------------tgtAGCTACTCTTTACCTT---------------TGTTCTCACGTAATGATT----A------GATATT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82701385 98 - 135337776 TAGCTGAACAT------CGTTTATTTGACAATATTGCAGTTGTGTGTGGGCGTGTG------CCTG---------------------TGTAGCTACTCTTTAATTT---------------TGTTCTCACATAATGATT----A------GATATT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127279 97 + 150013 TAGCTGAACAT------CATTTATTTGACAATATTGCACTTGTGTGTGGGTGTGTG-------CTG---------------------TGTAGCTACTCTTTAATTT---------------TGTTCTCACATAATGATT----A------GATATT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40161062 104 - 81552678 TATCTGAACAT------CACATGTTTGACAATATTGCACTtgtgtgtgtgtgtgtgtgtgtgtgtg---------------------tgtAGCTACTCTTTACCTT---------------TGTTCTCACGTAATGATT----A------AATATT i nomLeu3.chr19 C 0 I 295 s rheMac8.chr3 133469167 109 - 185818997 TAGCTGAACATCAT--GTATTTATTTGACAATATTGCACTTGTGTGT----------------GTG---------------------TGTAGCTACTCTTTATCTGC----AAAGAATTGATGTTCTCATTTAATGATT----AAATAAGAATATT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298848 109 + 192294377 TAGCTGAACATCAT--GTATTTATTTGACAATATTGCACTTGTGTGT----------------GTG---------------------TGTAGCTACTCTTTATCTGC----AAAGAATTGATGTTCTCACTTAATGATT----AAATAAGAATATT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780763 109 + 3123512 TAGCTGAACATCAT--GTATTTATTTGACAATATTGCACTTGTGTGT----------------GTG---------------------TGTAGCTACTCTTTATCTGC----AAAGAATTGATGTTCTCACTTAATGATT----AAATAAGAATATT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501334 109 + 10077455 TAGCTGAACATCAT--GTATTTATTTGACAATATTGCACTTGTGTGT----------------GTG---------------------TGTAGCTACTCTTTATCTGC----AAAGAATTGATGTTCTCACTTAACGATT----AAATAAGAATATT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707404 109 + 127223203 TAGCTGAATATCAT--GTATTTACTTGACAATACTGCACTTGTGTGT----------------GTG---------------------TGTAGCTACTCCTTACCTGC----AAAGAATTGATGTTCTCACTTAATGATT----AAATAAGAATATT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167603 109 - 1799296 TAGCTGAACATCAT--GTATTTATTTGACAGTATTGCACTTGTGTGT----------------GTG---------------------TGTAGCTACTCTTTACCTGC----AAAGAATTGATGTTCTCACTTAATGATT----AAATAAGAATATT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751235 109 + 6934359 TAGCTGAACATCAT--GTATTTATTTGACAATATTGCACTTGTACGT----------------GTG---------------------TGTAGCTACTCTTTACCTGC----AAAGAACTGATGTTCTCACTTAATGATT----AAATAAGAATATT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110640 103 - 128169293 ----TGAACATCAC--A---TTGTTTGACCACATTGCACTTGTATGT----------------GTG---------------------TATAGCTACTCATTACCTACGTGTAAAGACTTGATGTTCTTACTGAATGATT----AAAT---AATATT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728162 96 - 18371965 ----TGAACATCAC--A---TTATTTGACCACATGGCACGTGTGTGT----------------GTA---------------------T----------GTTACCTACCTGTAAAGACTTGATGTTCTCACTGAATGAGT----AAATAAGAACATT i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12744068 136 + 14340318 TGGTTAAATGTCTTCCGTGCTTATTTACCCATATCTCTCATGTGTGT----------------GTGCACATGCATTTGTAGTTTTGCTGTGACTATTTTTTACCTAC---TTAAGACCAGATATTCTCACTTAATGATTTATGAAATAA-AAAATT i otoGar3.GL873564 C 0 C 0 e aotNan1.NW_018514471v1 1889656 243 - 9267652 I e cebCap1.NW_016107540v1 1387853 246 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I a score=326676.000000 s hg38.chr22_KI270732v1_random 12848 78 + 41543 AACAATTAATTCAGT-AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCCC s panTro5.chr2B 114758624 78 - 133216015 AACAATTAATTCAGT-AAAATGTATGTTTTGCAATAT-TTCTCCACG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCCC i panTro5.chr2B C 0 C 0 s panPan2.chr12 82701483 78 - 135337776 AACAATTAATTCAGA-AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCCC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127376 78 + 150013 AACAATTAATTCAGT-AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATCATGCCCC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40161461 78 - 81552678 aaCAATTAATTCAGT-AAAATGTATGTTTTGCAATAT-TTCTCCATG--TTATTA----------------------------------------------------------------------TGCTTTACATTAG--TTTAATCATGTCCT i nomLeu3.chr19 I 295 C 0 s rheMac8.chr3 133469276 70 - 185818997 AACCATTAATACAGTAAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAG--TTTAATTATACCAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67298957 70 + 192294377 AACCATTAATACAGTAAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAG--TTTAATTATACCAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780872 70 + 3123512 AACCATTAATACAGTAAAAATGTATATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCT-----TTAG--TTTAATTATACCAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501443 75 + 10077455 AACCATTAATACAGTAAAAATGTACATTTTGTAATAT-TTCTCCATG------GA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATTATGCCAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707513 75 + 127223203 AACCATTAATACAGTAAAAATGTATATTTTGCAGTAT-TTCTCGATG------GA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATTATGCCAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167712 75 - 1799296 AACCATTAATGCAGTAAAAATGTATATTTTGTAATAT-TTCTTGATG------GA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATTATGCCAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751344 75 + 6934359 AACCATTAATGCGGTAAAAATGTACATTTTGCAATAT-TTCTCGATG------AA----------------------------------------------------------------------TGCTTTAAATTAG--TTTAATTATGCCAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110743 135 - 128169293 AACC---AATATCAT-AAAATGTATATTTTGCAGTAT-TTATTATTA------TATGCTTATAATGTGtaatatatttaatataaattataatatataatatatgattatagattataattaatttgtttctaattagtatttaat-------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728258 80 - 18371965 AACCAATAATATCAT-AAAATGTATA-TTTGCAGtat-ttattatta------ta---ttataatgtgtga------------------------------------------------------tgtttttatttagtatttatt-------- i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12744204 80 + 14340318 AACTGTTAACACTAT-AAAATGTGTATTTTTCCATATACTTTAGATAACTAATTG----------------------------------------------------------------------TATTTTAA-TTGG--CTTAATTATGCAGC i otoGar3.GL873564 C 0 C 0 e aotNan1.NW_018514471v1 1889656 243 - 9267652 I e cebCap1.NW_016107540v1 1387853 246 + 3566421 I e canFam3.chr18 51760998 193 - 55844845 I a score=245665.000000 s hg38.chr22_KI270732v1_random 12926 26 + 41543 TATAATGTGTACATTTTAACCTTTGA s panTro5.chr2B 114758702 26 - 133216015 TATAATGTGTACATTTTAACCTTTGA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82701561 26 - 135337776 TATAATGTGTACATTTTAACCTTTGA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127454 26 + 150013 TATAATGTGTACATTTTAACCTTTGA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40161539 26 - 81552678 TATAATATGTACATTTTAACCTTTTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133469346 26 - 185818997 TATAATGTGTACATTTTAACCATTTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299027 26 + 192294377 TATAATGTGTACATTTTAACCATTTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780942 26 + 3123512 TATAATGTGTACATTTTAACCATTTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501518 26 + 10077455 TATAATGTGTACATTTTAACCATTTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707588 26 + 127223203 TATAATGCGTACATTTTAACCGTTTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167787 26 - 1799296 TATAATGTGTACATTTTAACCATTTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751419 26 + 6934359 TGTAATGTGTGCATTTTAACCTTTTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110878 26 - 128169293 tataatGTGTACATTTTAGGCTTTTA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728338 26 - 18371965 ttttatgtttatattttaGGCTTTTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388099 26 + 3566421 tataatGTGTACATTTTAGGCTTTTA i cebCap1.NW_016107540v1 I 246 C 0 s aotNan1.NW_018514471v1 1889899 26 - 9267652 tataatgtgtacattttaGGCTTTTA i aotNan1.NW_018514471v1 I 243 C 0 s otoGar3.GL873564 12744284 25 + 14340318 -ACACTGCATGTATTTTAAACTTTAA i otoGar3.GL873564 C 0 I 2319 e canFam3.chr18 51760998 193 - 55844845 I a score=1301505.000000 s hg38.chr22_KI270732v1_random 12952 137 + 41543 CTATAGGTCACAATCTTACTTTGGTTCCTGTATTTGAATTTATGCTACTAAAGTCCTACAGCTAAAATAGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTAA---AATTATGTAATGAAATCAA------- s panTro5.chr2B 114758728 137 - 133216015 CTATAGGTCTCAATCTTACTTTGGTTCCTGTATTTGAATTTATGCTAATAAAGTTCTACAACTAAAAAGGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA------- i panTro5.chr2B C 0 C 0 s panPan2.chr12 82701587 136 - 135337776 CTATAGGTCTCAATCTTACTTCTGATCCTGTATTTCAATTTATGCTAATAAAGTCCTACACCTAAAAAAGATTATATACAC--TTATC-ACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATGAAATCAA------- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127480 137 + 150013 CTATAGGTCTCAATCTTACTTTGGTTCCTGTATTTGAATTTATGCTAATAAAGTCCTACAGCTAAAATAGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATGAAATCAA------- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40161565 137 - 81552678 CTATAGGTCTCAATCTTACTTTGGTTCCTGTATTTGAATTTATGCTAATAAAGTCCTACAGCTAAAAAGGATTATATAAAC--TTATCTACATTTTTACTAGTATTCTGATGTCATTTTA---AATTACGTAATTAAATCAA------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133469372 136 - 185818997 CTACAGCTCTCAATCTTACTTTT-CTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299053 137 + 192294377 CTACAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2780968 137 + 3123512 CTACAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501544 137 + 10077455 CTACAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACTTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707614 137 + 127223203 CTACAGCTCTCAATCTTACTTTTGCTCGTGTATTTGAATTTATGCTAATACAGTCCTATGGCTAAAAAGGATTATATAAAC--TTACCTACATTTTTACTAGTATTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167813 137 - 1799296 CTATAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAC--TTACCTACATTTTTACTAGTAGTCTGGTGTCATTTTA---AATTATGTAATTAAATCAA------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751445 136 + 6934359 CTACAGCTCTCAATCTTACTTTTGCTCCTGTATTTGAATTTATGCTAATACAGTCCTACGGCTAAAAAGGATTATATAAAT--TTACCTACATTCTTACTAGTATCCTGGTGTCATTTT----AATTATGTAATTAAATCAA------- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108110904 137 - 128169293 CTATATCTCTCAATCTTATTTTGGTTCTTGTATTTGAAATTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TTATCTACATTTTTAGTAGTTTTCTGATGTCATTTTT---AATTACATAATTAAATCCA------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728364 137 - 18371965 CTATGTCTCTCAATCTTATTTTGGTTCCTGTATTTGAATTTATGCTAAGAGAGTCCTACAGCTAAAAAGGATAATGTAAAC--TTATCGACATTTTTAGTAGTTTTCTGATGTCATTTTT---AATTACATAATGAAATCCA------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388125 136 + 3566421 CTATATCTCTCAATCTTA-TTTGGTTCCCGTATTTGAATTTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TTATCTATATTTTTGGTAGTTTTCTGATGTCTTTTTT---AATTACATAATTAAATCCA------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1889925 137 - 9267652 CTATATCTCTCAATCTTATTTTGGTTCCTGTATTTGAATTTATGCTAAGAAAGTCCTACAGCTAAAAAGGATTATGTAAAC--TCATCTACATTTTTAGTAGTTTTCTGATGTCATTGTT---AATTACATAATTAAATCCA------- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12746628 144 + 14340318 CTATGTTTTATATTTTTATTTTGTCTTCCATTTTTGAACATATGCTAATAAAGTTTTATGGCTACAAAGTATTATATGAACTATTGTTTGTATT-TTAGTAGTTTTCTGa----attttatataattatataattaaatGCATTTTCAA i otoGar3.GL873564 I 2319 I 181 e canFam3.chr18 51760998 193 - 55844845 I a score=1265616.000000 s hg38.chr22_KI270732v1_random 13089 122 + 41543 ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTTTAATTTTCTTATAAA-TATTACATAATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT s panTro5.chr2B 114758865 122 - 133216015 ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTTTAATTTTCTTATAAA-TATTACATAATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82701723 122 - 135337776 ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTTTAATTTTCGCATAAA-TATTACATAATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127617 121 + 150013 ATTTTAA-TTGGATTATTG---TTATCTGAGTTAAGGATCTAAATTTTTAATTTTCTTATAAA-TATTACATAATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40161702 122 - 81552678 GTTTTAATTTGGATTATTG---CTAACTGAGTTAAGGATCTAAATTTTTAATTTTCTTATAAA-TATTACATAATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCATTAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133469508 122 - 185818997 ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299190 122 + 192294377 ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781105 122 + 3123512 ATTTTAATTTGGATTATTG---TTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501681 125 + 10077455 ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707751 125 + 127223203 ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACAATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1167950 125 - 1799296 ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGATTTAAATTTTTAATTTTCTTATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751581 125 + 6934359 ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGAATTAAATTTTTAATTTTCTCATAAA-TATTACATCATTATTTCTGAACCATATATTGACTAATCTGCCCTTTATATGATGTGCACTAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111041 126 - 128169293 ATTTTAATTTGGGTTATTGTTATTATCTGAGTTAAGTCTCTAAATTTTTAATTTTCTTATAAAGTATTACATGATTATTTCTGCACCATATATTGACTAACCTGCCCTTTATACGAAGTGCATTAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728501 126 - 18371965 GTTTTAATTTGGGGTATTGTTATTATCTCAGTTAAGGCTCTAAATTGTTAATTTTCTTATAAACTATTACATGATTATTTCTGCACCATATATTGACTAATCTGTTCTTTATATGAAGTGCATTAT i saiBol1.JH378145 C 0 I 195 s cebCap1.NW_016107540v1 1388261 126 + 3566421 ATTTTAATTTGGGTTATTGTTATTATCTGAGTTAAGGCTCTAAATTTTTGATTTTCTTATAAAGTATTACATGATTATTTCTGCACCATATATTGACTAACCTGTCCTTTATACAAAGTGCATTAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890062 126 - 9267652 ATTTTAATTTGGATTATTGTTATTATCTGAGTTAAGGCTCTAAATTTTTAATTTTCTTATAAAGAATTACATGATTATTTCTGCACTATATATTGACTAACCTGCCCTTTATATGAAGTGCATTAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12746953 117 + 14340318 ATTTTAATTTGGATTATTGTTATTATATGGGGTAAGGTTCTAAATTAT---TTTCCTTATAAA---TTATCATTTTATTCCTAGACC--ACAATGACTAATCTGCCTTTTACATG-TCTGCATTAT i otoGar3.GL873564 I 181 C 0 e canFam3.chr18 51760998 193 - 55844845 I a score=434891.000000 s hg38.chr22_KI270732v1_random 13211 48 + 41543 AAGAGCTTGGGATTGTTTCATTTGCAAAGATGAATGCTTGAGAAGTAG s panTro5.chr2B 114758987 48 - 133216015 AAGAGCTTGGGATTGATCACTTTGCAAAGATGAATGCTTGAGAAGTAG i panTro5.chr2B C 0 C 0 s panPan2.chr12 82701845 47 - 135337776 AAGAGCTTGGGATTG-TTCATTTGCAAAGATGAATGCTTGAGTAGTAG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127738 48 + 150013 AAGAGCTTGGGATTGTTTCATTTGCAAAGATGAATGCTTGAGAAGTAG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40161824 48 - 81552678 AAGAGCTTGGGATTGATTCATTTGAAAAGATGAATGCTTGAGAAGTAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133469630 48 - 185818997 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATACTTGAGAAGTAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299312 48 + 192294377 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATACTTGAGAAGTAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781227 48 + 3123512 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501806 48 + 10077455 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707876 48 + 127223203 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168075 48 - 1799296 AAGAGATTAAGATTGATTCATTTGCTAAGATGAATGCTTGAGAAGTAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751706 48 + 6934359 AAGAGATTAAGATTGATTCATTTGCAAAGATGAATGTTTGAGAAGCAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111167 48 - 128169293 AAGAACTTGAAATTGATTCATTTGCAAAGATGAACACTTGAGAAGTAG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728822 42 - 18371965 aaGAACTTGGGATTGATTCATTTGCAAAGAAGAACACTTG------AG i saiBol1.JH378145 I 195 C 0 s cebCap1.NW_016107540v1 1388387 48 + 3566421 AAGAACTTGGGACTGATTCATTTGCAAAGATGAACACTTGGGAAGTAG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890188 48 - 9267652 AAGAACTTGGGATTGATTCATTTACAAAGATGAACACTTGAGAAGTAG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747070 45 + 14340318 -AAGATCAGGGAATAATTCATTTGCAAATATGAAAATATGAATA--AA i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51760998 193 - 55844845 I a score=1292752.000000 s hg38.chr22_KI270732v1_random 13259 134 + 41543 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATAGCCTATAGGTTGAAAAACTCCTGTAGT--GA---AGAAAGAAAATAACTAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----T s panTro5.chr2B 114759035 133 - 133216015 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTTGAATTG--AAAAATAGCCTATAGGTTGAAAAACTCCTGTAGT--GA---AGAAAG-AAATAACTAATATACAGTGACAATATAAATGTTATAAGTA------TTTA-----T i panTro5.chr2B C 0 C 0 s panPan2.chr12 82701892 133 - 135337776 ATATTTAATCATAACATTCCAAAATCTACTCG-TTACCTAGAATTG--AAAAATAGCCTATAGGTTGAAAAACTCCTGTAGT--GA---AGAAAGAAAATAACTAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----T i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127786 134 + 150013 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATAGCCTATAGGTTGAAAAACTCCTGTAAT--GA---AGAAAGGAAATAACTAATATACAGTGACAATATAAATATTATAAGTA------TTTA-----T i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40161872 134 - 81552678 ATATTTAAACATAACATCTCAAAATCTACTGGATAACCTAGAATTG--AAAAACAGCCTATAGGTTGAAAAACTCCTGTAGT--GA---AGAAAGAAAATAACTAACATACAGTGTCAATATAAATATTATAAGTT------TTTA-----T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133469678 134 - 185818997 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGT--GA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299360 134 + 192294377 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGT--GA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----T i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781275 134 + 3123512 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGT--GA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----T i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501854 129 + 10077455 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGT--GA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA---------------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5707924 134 + 127223203 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGT--GA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGTA------TTTA-----T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168123 134 - 1799296 ATAGTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGT--GA---AAAAAGAAAATAACTAATATACAGTGACAGTATAAATAGTAGAAGTG------TTTA-----T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751754 134 + 6934359 ATATTTAATCATAACATTTCAAAATCTACTGGATAACCTAGAATTG--AAAAATTGCCTCTAGGTTGAAAAACTCCTGTAGT--GA---AAAAAGAAAATAACTAATATACAGTGACAATATAAATAGTAGAAGAA------TTCA-----T i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111215 127 - 128169293 ATATTTAATCATAACATTTCAAA------------ACCTAGTATTG--AAAAATAGCCTATAGGCCGAAAATTTCCTGTAGC--AA---AAAAAGAAAATAACTAATATGTAGTGACAATATAAATATTAGAAGTA------TTTATTTTGT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728864 122 - 18371965 ATGTTTAATCATAACATTTCAAA------------ACCTAGAATTG--AAAAATAGCTTGTAGGTTGAAAATGTCCTGTAGT--GA---AAAAAGAAAATATCTAATATGTAGTGACAATATAAATATTAGAAGTA------TTTA-----T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388435 122 + 3566421 ATATTTAATCATAACATTTCAAA------------ACCTAGAATTG--AAAAATAGCCTATAGGTTGAAAATTTCCTGTAGC--AA---AAAAAGAAAATAACTAATATGTAGTGATAATATAAAT-----AAGTA------TTTATTTTAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890236 127 - 9267652 AAATTTAATCATAACATTTCAAA------------ACCTAGAATTG--AAAAATAGCCTATAAGTTGAAAATTTCCTGTAGC--GA---AAAAAGAAAATAACTAATATGTCGTGACAATATAAATATTAGAAGTA------TTTATTTTAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747115 129 + 14340318 ATATGTCATCATAACATCTAATA------------ACCCAGAAATG--AAAACAAGC--ATAGGTTGGAAAATTCCTATAGT--AAAATAAAGAGAAAATATTAATCATATAGGAATACtataaatatcaaaaattaattatttca-----t i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51761191 134 - 55844845 ATGATTACTCATAATATTTAATAACCTACATGTTAACCTATAATTGAAAAAAAAAGGCTGTGGGTTAGAAAATCGCTATAGTAAGA---AAAAAGAAAATGTTAAATATATA---ATCGTGTAAATATTAGAA-TA------TTTA-----T i canFam3.chr18 I 193 I 1320 a score=330739.000000 s hg38.chr22_KI270732v1_random 13393 29 + 41543 TTTATTATCGCCCTGAAATTTGATAATAC s panTro5.chr2B 114759168 29 - 133216015 TTTATTATCGCCCTGAAATTTGATAATAC i panTro5.chr2B C 0 C 0 s panPan2.chr12 82702025 29 - 135337776 TTTATTATCACCCTGAAATTTGATAATAC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127920 29 + 150013 TTTATTATCGCCCTGAAACTTGATAATAC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40162006 29 - 81552678 TTTATTACTGCCCCGAAATTTGATAACAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133469812 29 - 185818997 TTTATTATTGCCCTGAAATTTGATAATAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299494 29 + 192294377 TTTATTATTGCCCTGAAATTTGATAATAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781409 29 + 3123512 TTTATTATTGCCCTGAAATTTGATAATAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2501983 29 + 10077455 TTTATTATTGCCCTGAAATTTGATAATAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708058 29 + 127223203 TTTATTATTGCCCTGAAATTTGATAATAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168257 29 - 1799296 TTTATTATTGTCCTGAAATTTGATAATAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1751888 29 + 6934359 TTTATTATTGCCCTGAAATTTGATAATAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111342 29 - 128169293 TTTATTATTGCCCTGAAATTTGACAATAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 728986 29 - 18371965 TTTATTATCGCCCTGAAATTTGATAATAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388557 29 + 3566421 TTTATTATTGCCCTGAAATTTGACAATAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890363 29 - 9267652 TTTATTATTGCCCTGAAATTTGACAATAC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747244 29 + 14340318 tttataattGTTCTGAAATTTGAGAATAC i otoGar3.GL873564 C 0 I 580 e canFam3.chr18 51761325 1320 - 55844845 I a score=5415941.000000 s hg38.chr22_KI270732v1_random 13422 564 + 41543 AAacatgtaatatcta-catatcatccatatatcaggtcagaaaaaatca--atacattcttcaaaaatttagcataacagaaaatgcactctctctccttgatggaattaagttacaaataaaagta-aaaataagtagataagtagatggaagtagatgtttaaaaacaaagaaaaatatttGTTTTGGATAACATAAAATCTCAATTGACAATTCCAATATTTCCAGAACTTtggctgtcaactggtggagagttttcc-ccaggagacatttgtcaatgtctag-ggttattgtggggatgtcaagact-ggtggaggtgtg---aaatt-------tagaggtcaaacgaaacacctagaattgctagggcagccacccacaacaaagaatcctctggtcctaaaggtaagtagcaccaaggttgagaaaccATAATCTAGACAGTAAACACTACGTAGCTATTCCAAGTGCTCAGGAAAACACATCAGCGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------TATTAATCTAAGTGGAAGGG------------------------------------------------------------------------GCtgaa s panTro5.chr2B 114759197 562 - 133216015 AAACATGTAATATCTA-CATATCATCCATATATCAGGCCATAAAAAATCA--ATACATTCTTCAAAAATTTAGCATAACACAAAATGCACTCTCTCTCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGATGTTTAAAAACAAAGAAAAATATTTGCTTTGGATAACATAAAAACTCAATTGACGATTCCAATATTTCAAGAACTTtggctgtcaactggtg--gagttttcc-ccaggagacatttgtcaatgtctag-ggtaattgtggggatgtcaagact-ggtggaggtgtg---aaatt-------tagaggtcaaacgaaacacctagcattgctagggcagcctcccacaacaaagaatcctctggtcctaaaggtaagtagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACTATGTAGCTACTCCAAGTGCTCAGGAAAACACATCAGTGTCCTCGAGGGGAAAAGTGTAAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGGG------------------------------------------------------------------------GCtgaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82702054 565 - 135337776 AAACATGTAATATCTA-CATATCATCCATATATCAGGTCTTAAAAAATCA--ATACATTATTCAAAAATTTAGCATAACAGAAAATGCACTCTCTCTCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGATGTTTAAAAACAAAGAAAAATATTTGTCTTGGATAACATAAAATCTCAATTGACAATTCCAATATTTCCAGAACTTTGCCTGtcaactggtgaagagttttcc-ccaggagacattcgtcaatgtctag-ggttattgtggggatgtcaagactaggtggaggtgtg---aaatt-------tagaggtcaaacgaaacacctagcattgctaaggcagcctcccacaacaaagaatcctctggtcctaaaggtaagtagcaccaaggttcagaagccATAATCTAGACAGGAAACACTACGTAGCTATTCCCAGTGCTCAGGAAAACACATCAGTGCCCTCGAGGGGAAAAGTGTAAACATGTTAATTGCTCTACATGGTGACAAAAATCCATGT---------------TGTTAATCTAAGTGGAAGGG------------------------------------------------------------------------ACtgaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 127949 564 + 150013 AAACATGTAATATCTA-CATATCATCCATATATCAGGTCATAAAAAATCA--ATACATTCTTCAAAAATTTAGCATAACAGAAAATGCACTCTCTCTCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTACATGTTTAAAAACAAAGAAAAATATTTGTTTTGGATAACATAAAATCTCAATTGACAATTCCAATATTTCCAGAACTTTGCCTGtcaactggtggagagttttcc-ccaggagacatttgtcaatgtctag-ggttattgtggggatgtcaagact-ggtggaggtgtg---aaatt-------tagaggtcaaacgaaacacctagcattgctagggcagcctccctcaacaaagaattctctggtcctaaaggtaagtagcaccaaggttgagaaaccATAATCTAGACAGTAAACACTACGTAGCTATTCCAAGTGCTCAGGAAAACACATCAATGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGGG------------------------------------------------------------------------GCtgaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40162035 563 - 81552678 AAACATGTAATATCTA-CATATCATCCATATATCAGGTCATAAAAAATCG--ATACATTCTTCCAAAATTTAGCAAAACTGAAAATGCATTCTCTCTCCTTGATGGAATTAAGTTACAAATAAAAG-A-AAAATAAATAGATAAGTAGATGGAAGTAGATGTTTAAAAACAAAGAAAAATATTTGTTTTGGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAAGTTtggctgtcaactggaggagagttttcc-ccaggagacatttggcaatgtctgg-ggttattgtggggatgtcaagact-ggtggaggtgtg---aaatt-------tagaggtcaaacgaaacatctagcattgctagggcagcctcccacaacaaagaatcctctggtcctaaaggtaagtagcaccaaagttgagaaaccATAATCTAGAAAGTAAACACTATGTAGCTATTCCAAGTGCTCAGGAAAACACATTAATGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGCTGCACATGGTGACACAAATCCATGT---------------tgttaatctatgtggaagag------------------------------------------------------------------------gctgaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133469841 559 - 185818997 AAACATGTAATACCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagact-ggtgggcgtgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67299523 559 + 192294377 AAACATGTAATACCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagact-ggtgggcgtgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781438 559 + 3123512 AAACATGTAATACCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAAATTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagact-ggtgggcgtgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502012 631 + 10077455 AAACATGTAATATCTA-CGTATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATCAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATATCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagact-ggtgggcgtgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcttcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACATATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAGGCTGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGTTGTTAATCTAAGTGGAAGACGCtgaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708087 560 + 127223203 AAATATGTAATGTCTA-CGTATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATCAAGTTACAAATAGAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGGAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTTAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctagaagttattgtggggatgtcaagact-ggtgagcatgtg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctgtggtcctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCTGTACATGGTAACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1168286 559 - 1799296 AAACATGTAATACCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAATTTAGCATAATAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTACATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTTTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttactgtgggaatgtcaagact-ggtgggcgtgtg---aaatt-------tggaggtcaaatgaaccatctagcattgctagggcagcttcccacaacaaataatcctctggttctaaaggtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAAGGTAGCTACTCGAAGTGCTCAGCAAAACACATCAATGCCCTTGAGGGGAAAAGTGTAAACATTTTAATTGCGGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCTGAA i manLeu1.NW_012105809v1 C 0 I 6408 s colAng1.NW_012115910v1 1751917 559 + 6934359 AAACATGTAATATCTA-CATATCATCCATATATTAGGTCAT-AAAAATCA--AAACATTCTTGAAAAATTTAACATAACAGAAAATGCA----CTATCCTTGATGGAATTAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATGGAAGTAGAAGTTTTAAAACAAAGAAAAATATTTGTTTGTGATAACATAAAAACTCAATTGACAATTCCAATATTTCAAGAACTTGggctctcaactggtggaaatttttcc-ccaggagacatttggcaatgtctag-agttattgtggggatgtcaagact-ggtgggcgtatg---aaatt-------tggaggtcaaatgaaacatctagcattgctagggcagcctcccacaacaaataatcctctggttctaaaagtaaatagcaccaaggttgagaaaccATATTCTAGAAAGTAAACACAATGTAGCTACTCGAAGTGCTCAGGAAAACACATCAATGCCCTTGAGGGGAAAATTGTAAACATTTTAATTGCTGTACATGGTGACACAAATCCATGT---------------TGTTAATCTAAGTGGAAGAG------------------------------------------------------------------------GCTGAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111371 563 - 128169293 ACACATGTAATATATA-CATATTACCCATATATTAGCTCATAAAAAA-CA--ATACATTCTTGAAAAATTTAGCATGACAGAAAATGCACTTTCTATCCTTGATGCAATGAAGTTACAAATAAAAGTA-AAAATAAGTACAGAAGTAGATTGAAGTAGATGTTT-AAAATAAAGAAAAATATTTGTTTTGGATAACATAAATACTCAATTGATAATTCCAATATTTCAAGCACTTtggctctcaactggtggagattcttcccccaggtgacatttggcaatgtctag-agttatggtggggatgtcgagaat-ggtgggggtgtg---aaatt-------taggggtcaaacgaaacttctaacattgtcagggcaacttcccaccacgaagaatcctctggtcctaaaggtaaatagctccaaggttgaaaaaccATAATCTAGAAAATAAAAACCCTGTAGGCATTCAAAGTGCTCAGGAAAACACATCGATGCCCTTGAGGGAAAAATTGTAAACATTTTAATTGCTGTGCATAGTGCCAAAAATCCATGT---------------tgttggtctaagtggaagag------------------------------------------------------------------------gcttaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729015 562 - 18371965 ACACATGTAATAGATA-CATACTACCCATATATTAGCTCATAAAAA---A--ATACATTCTTGAAAAATTTAGCATGACAGAAAATGCACTTTCTATCCTTGATGCAATGAAGTTACAAATAAAAGTA-AAGATAAGTAGATAAATAGATTGAAGTAGATGTTTAAAAATAAAGAAAAATATTTGTTTTGGATAACATAAATGCTCAATTGACAATTCCAATATTTCAAGCACGTtggctctcaactggtggagattcttcctccaggagacatttggcaatgtctag-agttatggtggggatgtcaagact-ggtaggagtgtg---aaatt-------tagaggtcaaacaaaacttctaacattaccagggcaacttcccaccacaaagaatcctctggtcctaaaggtaaacagcaccaaggttttaaaaccATAATCTGGAAAAGAAAAACCGTGTAGGCATTCAAAGTACTCAGGAAAACACATCCATGCCCTCGAGGGGAAAAGTGTAAACATTTTAATTGTTGTTCATGGAGACACAAATCCATGT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1388586 562 + 3566421 ACACATGTAATATATA-CGTATTACCCATATATTAGCACATTAAAAA--A--ATACATTCTTGAAAAATCTAGCATGACAGAAAATGCATTTTCTATCCTTGATGCAATGAAGTTACAAATAAAAGTA-AAAATAAGTAGATAAGTAGATTGAAGTAGATGTTTAAAAATAAAG-AAAATATTTGTTTTGGATAACATAAATACTCAATTGACAATTCCAATATTTCAAGCACTTtggctctgaactggtggagattcttcccccaggagacatttggcaatgtctag-agttatggtggggatgtcaagact-ggtgaggttgtg---aaatt-------tagaggtcaaacaaaacttctaacattgccagggcaacttcccaccacaaagaatcctctggtcctaaaggttaatagcaccaaggttcaaaaaccATAACCTAGAAAATAAAAACCTTGTAGGTGTTCAAAGCGCTCAGAAAAACACATCGATGCCCTGGAGGGGAAAAGTGTAAACATTTTAATTGCTGTGCATGGTGACACAAATCCATGT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------GCtgaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890392 555 - 9267652 ATACATGTAATATATA-CATATTACCCATATATTAGCTCATAAAAAAACA--ATACACTCTTGAAAAATTTAGCATAACAGAAAATGCACTTTCTATCCTTGAAGCAATGAAGTTACAAATAAAAGTA-AAAATAAGTAGAT----------AAGTATATGTTTAAAAACAAAGAAAAATATTTGCTTTGGATAACATAAATACTCAATTGACAATTCCAATATTTCAAGCACTTtggctctcaactggtggagattcttcccccaggagacatttggcaatgtctag-agttatggtggggatgtcaagact-ggtgggggtgtg---aaatt-------tagaggtcaaacgaaacttctaacgttgccagggtgacttcccaccacaaagaatcctctggtcctaaaggtaaatagcaccaaggttgaaaaatcATAATCTAGAAAATAAAAACTATGAAGGCATTCCAAGTGCTCAGGAAAACACATAGATACCCTCGAGGGGAAAAGAGTAAACATTTTACTTGCTGTGCATGGCGACACAAATCCATGT---------------TGTTGGTCTAAGTGGAAGAG------------------------------------------------------------------------ACtgaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12747853 533 + 14340318 GCACATGGAATGTCTGCCACATTATCCACAGATC-GTTCATAAGGAAACATCAGATGCTCTTGAAAAATCTAATATAGCTGAAAATACATTCTCTGTGCTTAGTGCCATGAACTTATAAATGGAAGTAGAAAATAAGTGGATAAGTGGATAGAAGTCCATGTTG-AAAACAGGAA-----ATTTATTTTGGATAACATAAAACCTCTCTCTATAATTAAAAAACATCAAAATTTgtgactctcaaatggtggat-tttatcc-gcagaagacattttgcaaagtgtag-agatactctggggttgtcaagact-tgggcatgggtgcccaaatccagagggtagaggtcaggctcaacagccagcatgtgcaggaaaacctcccac--------------------------------------------aGAAACTGTAATCTACAAAATAAAAACTGTTCAGCTGTTTGAAATTCTTGGGAAAACACATCAACACGCACGTGGGGGAAAA-------ATTTTAATTGCTGTTTGTGGTTACATAAACCCATATGCACACATGACAtcaccctaaaataattgaaagga------------------------------------------------------------------------tcaga- i otoGar3.GL873564 I 580 C 0 e canFam3.chr18 51761325 1320 - 55844845 I a score=712837.000000 s hg38.chr22_KI270732v1_random 13986 71 + 41543 gcacaaaacgtaattcaaagagtttacttgagccacaa--tgaggaca-gctgcctggaaggaacagacccaag s panTro5.chr2B 114759759 71 - 133216015 gcacaaaacataattcaaagagtttacttgagccacaa--tgaggaca-gctgcctggaagaaacagacccaag i panTro5.chr2B C 0 C 0 s panPan2.chr12 82702619 71 - 135337776 gcacaaaatgtaattcgaagagtttacttgagccacaa--tgaggaaa-gctgcctggaagaaacagacccaag i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 128513 71 + 150013 gcacaaaacgtaattcaaagagtttacttgagccaaaa--tgaggaca-gctgcctggaagaaacagacccaag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40162598 71 - 81552678 gcagaaaacgtcattcaaagagtttagttgagccaaaa--tgaggaca-gctgcctggaagaaacacacccaag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133470400 71 - 185818997 gcacaaaacgtaattcaaagagtttacctgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300082 71 + 192294377 gcacaaaacgtaattcgaagagtttacctgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2781997 71 + 3123512 gcacaaaacgtaattcaaagagtttacctgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502643 71 + 10077455 gcacaaaacgtaattcaaagagtttacttgagccaaaa--taaggaca-gttgcctggaagaaacagacccaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708647 71 + 127223203 gcacaaaacgtaattcaaagagtttacttgagccaaaa--taaggaca-gctgcctggaagaaacagacccaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175253 71 - 1799296 gcacaaaacgtaattcaaagagtttacttgagccaaaa--taagggca-gttgcctggaagaaacagacccaag i manLeu1.NW_012105809v1 I 6408 C 0 s colAng1.NW_012115910v1 1752476 71 + 6934359 GCACAAAAAGTAATTCaaagagtttacttgagccaaaa--taagctca-gctgcctggaagaaacagacccaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108111934 72 - 128169293 gcacaaaacataattcaaagagtttacttgagccaaaa--tgaggacaggctgcttgtaagaaacagacccaag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729577 72 - 18371965 gcacaaaacataattcaaagagtttacttgagccaaaa--tgaggacaggctgcctgtaagaaacagacccaag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389148 72 + 3566421 gcacaaaacataattcaaagagtttacgtgagccaaaa--tgaggacaggctgcctgtaagaaacagacccagg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1890947 72 - 9267652 gcacaaaatgtaattcaaagagtttacttgagccaaaa--tgaggacgggctgcctgtaagaaacagacccaag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12748386 67 + 14340318 ------gtcctggtttaatgagtttattcgagttaaaagctagaaatg-gccattcagaagtcacaagcttcag i otoGar3.GL873564 C 0 I 2362 e canFam3.chr18 51761325 1320 - 55844845 I a score=3536644.000000 s hg38.chr22_KI270732v1_random 14057 367 + 41543 tatccttggatatgaactccctttggagctttgcaacaagcagtttcttaaaggc----aaaaaagggtccagaagtgggatgatgcaaagacgtttgtcacaaattctcattggcttatggaaataacatttattagtgactggctatacactgttacactattatttggtgtggattatagtgtctggtatggcgttattggttaatttatagctactgtggcaacagcaagcagcctagatgaacacacagctcaaagaggagcaggacagaactgctgtctcatttgaatgtctctctgggcctgattatttaaaaggacttgcatttctcacatgaaagttattttcttttctcCA---TGTCCATAAA s panTro5.chr2B 114759830 366 - 133216015 tatccttggatatgaactccctttggagctttgcaacaagcagtttcttaaaggc----aaaaaagggacaagaagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaatagcatttattagtgactggctatacactgttacactattattgggtgtggattatagtgtctggtgtggcgttattggttaatttatagctactgtggcaacagc-ggcagcctagatgaacacacagctcaaagaggagcagaacagaactgctgtctcatctgaatatctctctgggcctgattatttaaaaggacttgcatttctcacatgaaagttattttcttttctcaA---TGTCAATAAA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82702690 366 - 135337776 tatccttggatatgaactccctttggagctttgcaacaagcagtttcttaaaggc----aaaaaagggtccagaagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacatttattagtaacaggctatacactgttatgctattattgggtgtggattatagtgtctggtgtggcgttattgcttaatttatagctactgtggcaacagcaagcagcctagatgaacacacagctcaaaga-gagcaggacagaactgctatctcatttgaatatctctctgggcctgattatttaaaaggatttgcatttctcacatgaaagttatttccttttctcaA---TGTCCATAAA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 128584 365 + 150013 tatccttggacatgaactccctttggagctttgcaacaagcagtttcttaaagg-----gaaaaagggtccagaagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaata-catttattagtgactggctatacactgttacactattattgggtgtggattatagtgtctggtgtggcgttattggttaatttatagctactgtggcaacagcaagcagcctagatgaacacacagctcaaagaggagcaggacagaactgctgtctcatttgaatatctctctgggcctgattatttaaaaggacttacatttctcacatgaaagttattttcttttctcaA---TGTCCATAAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40162669 367 - 81552678 tatgcttggatacgaactccatttggagatttgcaacaagcagtttcttaaaggc----aacaaagggacaagaagtgggatgatgcaaagaggtttgtcagaaattctcattggcttatggaaataacatatattagtgactgtctatacactgttacactattattgggtgtggattatagtgtctggtgtggcattattggttaatttatagctactgtggcaatagcaagcagcctagatgaacacacagctcaaagaggagcaggacagaactgctgtctcatttttatatctctctgggcctgattctttaaaaggacttgcatttctcacatgaaagttattttcttttctcaA---TGTCAATAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133470471 367 - 185818997 tattcttggatattaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggctcatggaaataacattgattagtgactggctatacactgttatgctgttattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagttgggcacgactgctgtctcattttaatatctctctgggcctgattatttaaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300153 367 + 192294377 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggctcatggaaataacattgattagtgactggctatacactgttatgctgttgttgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagttgggcacgactgctgtctcattttagtatctctctgggcctgattatttaaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782068 367 + 3123512 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----tgaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctgttattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagttgggcacgactgctgtctcattttaatatctctctgggcctgattatttaaaaggactagcatttctcacatagaagttattttattttctcaA---TGTCAATAAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2502714 367 + 10077455 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagtcgggcacgactgctgtctcattttaatatctctctgggcctgattatttaaaaggactagcatttctcacataaaagttattttattttctcaA---TGTCAATAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5708718 367 + 127223203 tattcttggatatgaactccatttggcgttttgcaacaagcaatttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggcttggcattattgattaatttatagctactgtggcaacctcaagcagcctagatgaatacacagctcaaagaggagtcaggcacgactgctgtctcattttaatatctctctgggcctgattatttaaaaggacttgcatttctcacataaaagatattttattttctcaA---TGTCAATAAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175324 367 - 1799296 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagagatttgtcacaaattctcattggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggtgtggcattattgattaatttatagctactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagttgggcacgactgctgtctcattttaatatctctctgggcctgattatttaaaaggactagcatttctcacataaaagttattttattttctcaA---TGTCAATAAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1752547 367 + 6934359 tattcttggatatgaactccatttggagttttgcaacaagcagtttcttaaaggc----taaaaagggacaaggagtgggatgatgcaaagaggtttgtcacaaattctcactggcttatggaaataacattgattagtgactggctatacactgttatgctattattgggtgtggattatggtgtctggcgtggcattattgattaatttatgactactgtggcaacagcaagcagcctagatgaatacacagctcaaagaggagtcgggcacgactgctgtctcattttactatctctctgggcctgattatttaaaaggacttgcatttctcacataaaagttattttattttctcaT---TGTCAGTAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112006 367 - 128169293 tatccttggatatgaactccatttgcagctttactgaaagcaggttcttaaaggc----aaaaaggagacaaggagtggggtgatgcaaagatgtttgtcacaaattctcattggcttatggaaataacattgattagtgactgactatacactgttaagctattatagggtgtggattatagtgtctggtgtggcattattagttaatttatagctactgtggcaacagcaagcagcctggatgaatacacagctcaaagaggagtgggacctgacttctgtctcattttaatatcactctgggcctgattatttgaaaggacttgcatttctcacataaaggttattttcttttctcaG---TGTCAATAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 729649 368 - 18371965 tacccttggatatgaactctgtttgcagctttgctacaaggaggttcttaaaagcaaaaaaaaaagggacaaggagtggggtaatgcaaa---gtttgtcagaaattctcattggcttacggaaatagcattgattagcgactggctatacactgtcaagctattataggatatggattatagtgtctggtgtggcattattggttaacttatagctactatggcaacagcaagcagcctggatgaatacacagctcaaagaggagtaggacctgacttcggtctcattttaatgtcactctaggcctgattatttaaaaggacttgaatttctcacataaaagttattttcttttctcaA---TGTCAATAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389220 367 + 3566421 tatccttggatatgaactccgtttgcagcttggctacaagcaggctcttaaaggc----aaacaagggacaaggagtggggtgatgcaaagaggtttgtcagaaattctcattggcttatggaaatagcattgattagtgactggctatacactgttaagcta-catagggtatggattatagtgtctggggtgacattattggttaatttatagctactgtggcaacagcaagcaacctggatgaatacacagctcaaagaggagtaggacctgacgtctgtctcattttaatatcactctgggcctgattatttaaaaggacttgcatttctcacat--atgttattttctttcctcaGACATGTCAATAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891019 367 - 9267652 tatccttggatatgaactccatttgcagctttgctacaagcaggttcttaaaggc----aaaaaagggacaaggagtggggtgatgcaaagtggtttgtcagaaattctcattggcttacggaaataacattgattagtgactggctatacactgttaagctattatagggtgtggattatagtgtctggtgtggcattattggttaatttatagctactgtggcaacagcaagcagcctggatgaatacgcagctcaaagaggagcaggacctgacttctgtctcattttaatatcactctgggcctgattatttaaaaggacttgcatttctcacataaaagttattttcttttttcaA---TGTCAATAAA i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12748453 2362 + 14340318 I e canFam3.chr18 51761325 1320 - 55844845 I a score=1853202.000000 s hg38.chr22_KI270732v1_random 14424 186 + 41543 TGAGAATAAATAGAT-GCAAAATAGATTTTTTTTGAGGATGAAGTAAATGGAATGAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAAAGTG--ATGTTAAGCTATTAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAgtatgggctaaa s panTro5.chr2B 114760196 184 - 133216015 TGAGAATAAATAGAC-ATAAAATAGG-TCTTTTCGAGGATGAAGTAAATGGAATAAAAAACAAAACCCAAGCTGAACGGAAATCATAGAGGGAAGAAAA-GTTATAAATACGTGGAGTTTTCAAAGTG--ATTTTAAGCTATTAGGAATCAGTTAAATGTTGGGGGA-ATTTGTCTGAgtatgggctaaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703056 185 - 135337776 TGAGAATAAATAGAC-GTAAAATAGA-TCTTTTCGAGGATGAAGTAAATGGAATGAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAAAGTG--ATTTTAAACTATTAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAGAATgggctaaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 128949 185 + 150013 TGAGAATAAATAGAC-ATAAAATAGA-TCTTTTCGAGGATGAAGTAAATGGAATGAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATGGATTTTTCAATGTG--ATTTTAAGCTATTAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAgtatgggctaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163036 185 - 81552678 TGAGAATAAATAGAC-CTAAAATAGA-TCTTTTCGAGGATGAAGTAAACGGAATAAAAAACAAAACCCAGGCTGACCAGAAATCATAGAGGGAAGGAAAGGTTATAAATGTATGGATTTTTCAAGGTG--ATTTTAAGGTATCAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAgtatggactaaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133470838 185 - 185818997 TGAGAATAAATAGAC-ATAAAATAGA-TCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300520 185 + 192294377 TGAGAATAAATAGAC-ATAAAATAGA-TCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAAGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782435 185 + 3123512 TGAGAATAAATAGAC-ATAAAATAGA-TCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503081 185 + 10077455 TGAGAATAAATAGAC-ATAAAATAGA-TCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATATTAAGCTACCAGGAATCAGTTAAATGTTGGGGAA-TTTTGCCTGGgtatgggctaag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709085 185 + 127223203 TGAGAATAAATAGAC-ATAAAATAGA-TCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175691 185 - 1799296 TGAGAATAAATAGAC-ATAAAATAGA-TCTTTTTGAGGATTAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATGATAGAGGGAAGAAAAGGTTATAAATATATAGATCTTTCAAAGTG--ATTATAAGCTACCAGGAATCAGTTAAATGTTGGGGGA-TTTTGCCTGGgtatgggctaag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1752914 185 + 6934359 TGAGAATAGATAGAC-ATAAAATAGA-TCTTTTTGAGGATGAAGTAAATGCAGTAAAAAACAAAACCCAAGCTGACCAGAAATCATAGAGGGAAGAAAAGATTATAAATATATAGATTTTTCAAAGTG--ATGTTAAGCTACCAGGAATCAGTTAAACGTTGGGGGA-TTTTGCCTGGgtatgggctaag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112373 186 - 128169293 TGAAAATAAAGGGAC-AAAAAATAGA-TCTTTTCAAGGATGAGGTAAATGGAGTAATAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCAGGAATCAGTTAAATGTTCGGGGATTTTTGCCTGGgtatgggttaag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730017 185 - 18371965 TGAAAATAAAGGGAC-AAAAAATAGA-TCTTTTTGAGGATGAAGTAAATGGAGTAATAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGTTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGGgtatgggttaag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389587 185 + 3566421 TGAAAATAAAGGGACAAAAAAATAGA-TCTTTTCGAGGATGAAGTAAATGGAGTAATAAAC-AAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATG--ATATTAAGCTATCCGGAATCAGTTAAATGTTGGGGTA-TTTTGTCTGGCtatgggttagg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891386 188 - 9267652 TGAAAATAAAGGGACGAAAAAATAGA-TCTTTTTGAGGATGAAGTAACTAGAGTAACAAACAAAACCCAAGCTGACCAGAAATCATAGAAGAAAGAAAAGGCTGTAAATATATAGATTTTCCAAAATGATATATTAAGCTATCAGGAATCAGTTAAATGTTGGGGGA-TTTTGTCTGAgtatgggttaag i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12750815 178 + 14340318 TGAGAAGAAATAAAC-ATAAAACACC-TATTTTCTAGGATCAAGTAAGTGGAG---AAAACAAAATCTAAGCTGACCAGAAATTATAACATGGAAACAAAGTCAAAAAGATATAA--TTTAAAAGGGA--ATCTTAAACTATAAAATATCAAGTAGA--TTTGGGGA-TTTTTTTTTCTTTTGGTTTGAA i otoGar3.GL873564 I 2362 I 954 e canFam3.chr18 51761325 1320 - 55844845 I a score=1403929.000000 s hg38.chr22_KI270732v1_random 14610 152 + 41543 ggagaatatcccttttgccttctgaagtttccctgaaaatc-actaataggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggagcccttagaacgaagacccaga-------cacacgatgcgtgcagaagcttatc s panTro5.chr2B 114760380 152 - 133216015 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-actaacaggaggcagataaatagtagaaaaggca-----tacaggtttctgtaatgtgtgtacactggagcccttagaatgaagacccaga-------cacacgatgggtgcagaagtttaac i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703241 152 - 135337776 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-actaataggaggcagataaataatagaaaagtta-----tacaggtttctgcaatgtatgtacactggagcccttagaacaaagacccaga-------cacacgatgcgtgcagaagcttatc i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129134 150 + 150013 ggagaatgtctcttttgccttctgaagtttccctgaaaatc-a-taataggaggcagataaatagtagaaaaggca-----tacaggtttctgcaatgtgtgtacactggag-ccttagaacgaagacccaga-------cacacgatgcgtgcagaagcttatc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163221 152 - 81552678 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-actaataggagggagataaatagaagaaaaggca-----tacagttttctgcaatgtgtgtacactggagcccttagaatgaagacccgga-------cacacgatgggtgcagaagcttatc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471023 159 - 185818997 ggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300705 159 + 192294377 ggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2782620 159 + 3123512 ggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaagcct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503266 159 + 10077455 ggagaatgtcccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709270 159 + 127223203 ggagaatgtcccttttgccttctgaagattccctgaaaatc-aataacaggaggcagataaatagtagaaaaggca-----tacaggcttctgtaatgtgtgtaccctggagcccatagaatgaagacccaggacccagtcacacggtgggtacagaagcttatc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1175876 159 - 1799296 ggagaatgtaccttttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggct-----tacagattgctgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacacggtgggtgcagaagcttatc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753099 159 + 6934359 ggagaatgttcattttgccttctgaagattccctgaaaatc-actaacaggaggcagataaatagtagaaaaggca-----tacagttttccgtaatgtgtgtacactggagcccttagaatgaagacccaggacccagccacatggtgggtgcagaagcttatc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112559 153 - 128169293 ggagaatgttcattttgccttctgaagtttccctgaaaatcatctgaaaggaggcagatgaatagcagaaaaagca-----tacaggtttctgtaatgtgtgtatgtgggggccctcagaatgaagacccaac-------cacatgatggatacagaagctaatc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730202 152 - 18371965 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-tttgacaggaggcagataaatagcagaaaaggct-----ttcaggtttctgtaatgtgtgtatgtgggggccctcagaatgaagacccagc-------cacgtgatgggtacagaagctaatc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389772 157 + 3566421 ggagaatgtcccttttgccttctgaagtttccctgaaaatc-actgacaggaggcagataaatagcagaaaaggcatacagtacaggtttctgtaatgtgtgtatgtaggggccctcagaatgaagactcagc-------cacatgatgggtacagaagctaatc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891574 150 - 9267652 ggagaatgtcccttttgccttctgaagattccctgaaaatc---agacaggaggcagataaatagcaggaaagtca-----tacaggtttctgtaacgtgtgtatgtgggggccctcagaatgaagacccagc-------cacatgatgggtacagaagctaatc i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12750993 954 + 14340318 I e canFam3.chr18 51761325 1320 - 55844845 I a score=2405207.000000 s hg38.chr22_KI270732v1_random 14762 274 + 41543 taccacatgaagtttacagaaagaatggggtcttggatcacag----ggaaaataa--aaaaag---gttat------gtgagaaaacga-ccctggctagcaacagtggacttattacataggtggaacctcactgggagcattcctcagagagaatagac------agaaaatgtttctttcagacctttggagacctcagactctcagttaacctttcctagatccagacaagggggcagaactcagagaaagcctggctgcatcaaggcagattctctaacagtgcaaatct s panTro5.chr2B 114760532 275 - 133216015 taccacatgaagtttacagaaagaatagggtcatggatcacaga---ggaaaaaaa--aaaaaa---gttat------gtgagaaaagga-ccctggctaacaacagtggacttattacgtaggtgaaacctcactgggagcagtcctcagagataatagac------agaaaatgtttctttcagacctttgcagacctcagaccctcagttaatctttcctagatccagacaagggagcagatctcagagaaagcctggctgcatcaaggcagattctctactgacgcaaatct i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703393 276 - 135337776 taccacatgaagtttacagaaagaatggggtcttggatcacag----ggaaaaGAAAGAAAAag---gttat------gtgaggaaacgt-acctggctagcaacagtggatttattacataggtggaacctcacttggagcagtcctcagagaaaatagac------agaaaatgtttctttcagacctttggagacgtcagactctcagttaagctttcctagatccagacaaggtggcagacctcagagaaagcctggttgcatcaaggcagattctctatcgatgcaaatct i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129284 273 + 150013 taccacatgaagtttacagaaagaatggggtcttggatcacag----gggaaaaaa--aaaaag---gttat------gtgagaaaacga-cgctggctagcaacagtggacttattacataggtggaacctcactgggagcagtcctcagagagaatagac------agaaaatgtttctttcagacctttggagacctcagactctcagttaacctttcctagatccagacaagg-ggcagacctcagagaaagcctggctgcatcaaggcagattctctaaacatgcaaatct i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163373 271 - 81552678 taccacatgaagtttacagaaagaatggggtcttggatcacag----ggaaaa-----aaaaag---gttat------gtgagaaaagga-ccctggctagcaacagtggacttattacgtaggtgaaacctcactgggagcaatcctcagaaagaacagac------agaaaatgtttctttcagacctttggagacctcagactctcagttaaactttcctagatccagacaaggaggcagacctcagagaaagcctggctgcatcagggcagattctctacccatgcaagtct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471182 282 - 185818997 taccatactgagtttacagaaagaatggggacttggatcacag----aaaaaaaaaaaaaaaag---attat------gagagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67300864 282 + 192294377 taccatactgagtttacagaaagaatggggacttggatcacag----aaaaaaaaaaaaaaaag---attat------gagagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i macFas5.chr3 C 0 I 328 s macNem1.NW_012011522v1 2782779 283 + 3123512 taccatactgagtttacagaaagaatggggacttggatcacaga---aaaaaaaaaaaaaaaag---attat------gagagaaaagga-ccttggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcggagagaacagatagaaaaagaaaatgtttctttcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503425 280 + 10077455 taccatattgagtttacagaaagaatggggacttggatcacagaaagaaaaaaaaaaaaaaaag---gttat------gagagaaaagga-ccctggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcagagagaacagac------agaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709429 270 + 127223203 taccacattgagtttatagaaagattggggacttggatcacag----------aaaaaaaaaag---attat------gagacaaaagga-ccctggctagcaacagtggtcttgttacataggtgaaacttcactggaagtggccctcagagagaacagat------acaaaatgtttatctcagacctttggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctacagatggaaatct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176035 276 - 1799296 taccacattgagtttacagaaagaatggggacttggatcacag----aaaaaaaaaaaaaaaag---gttat------gagagaaaagga-ccctggctagtaacagtggtcttgttacataggtgaaacttcactgggagtggccctcagagagaacagac------agaaaatgtttctctcagacctatggaggtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcatcaaggcagattctctatagatgcaaatct i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753258 279 + 6934359 taccacactgagtttacagaaagaatggggacttggatcacag----aaaaaaaaaaaaaacggggagttat------gagagaaaagga-ctctggctagcaacagtggttttggtacacagctgaaacttcactggaagtggccctcagacagaacagac------agaaaatgtttctctcagacctatggaagtctcagactctcagttaacttttcctagatccagacaagggggcagacctcagagaaaacctggctgcctcaaggcagattctctacaggtgcaaatct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112712 247 - 128169293 taccacgctgaagttacagaaagaatggggacttagatcaccg----ggaaaaaaa--aggtag-------------------aaaagga-ccctgactagcaacagtggtcttgttacgtagatgaaatctcactgggagaa-----------------ac------agaaactgtttctttcagacctttagaggcttcagactctcagtttacctttcctagatccagacaaggggacagacctcagagaaagcctgggtgcatcaaaccagattctctacaggtacaaatct i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730354 270 - 18371965 cactccgctgaagttacagaaagaatgggggcttagatcaccg----gaaaaaaaa--aaaaag---a----------tagaaaaaagga-ccctaactagcaacagtggtcttgttacgtagatgaaatctcactgggagaagccctcagaggggatagac------agaaactgtttctttcagacctttagaggcttcagactctccatttacctttcctagaaccagacaaggggacagaccttggagaaagcctgggtgcatcaagtcagattctctacagctacaaatct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1389929 255 + 3566421 tacaacgctgaagtgacagaa-------------agatcaccg----gaaaaaaaa--agagag---------------agggaaaagga-ccctgactagcaacagtggtcttgttgtgtagatgaaatctcactgggagaagccctcagaaaggatagac------agaaactgtttctttcagacctttagaggcttcagactctcattttacaattcctagatcctgaccaggggacagacctcagagaaagcctgggtgcatcaagccagattctctacaggtacaaatct i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891724 270 - 9267652 taccacactgaagttacagaaagaatgggggcttagatcacca----gaaaaaaaa--aaagat---a----------gagagaaaagga-ccctgactagcaacagtggtcttgttacgtagattaaatctcactgggagaagccctcagagaggatagac------agaaactgtttctttcagacctctagagacttcagactctcagtttacctttcctagatccagacaagaggacagacctcagagaaagcctgggtgcatcaagccagattctctacaggtacaaatct i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12751947 268 + 14340318 taccatcttgaggatgcagaaagaacaaaggcttggatcctgg----ca---------aaacag---gttataggacagagaaaagaggaggcctggctagcaaaggtggtctttttata-aaatgaaagatcacaggtagcagccctcagaagg--tagat------gatatatgtttccttcagacctttaaaaatgtcagctcctcagctaaacttctccaggtct-gccaagggag--ggcctcagagaaaaccaggctacggcagagcaacctctctctggaggcaaatct i otoGar3.GL873564 I 954 C 0 e canFam3.chr18 51761325 1320 - 55844845 I a score=49644.000000 s hg38.chr22_KI270732v1_random 15036 5 + 41543 cccca s panTro5.chr2B 114760807 5 - 133216015 cccca i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703669 5 - 135337776 cccca i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129557 5 + 150013 cccca i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163644 5 - 81552678 cccca i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471464 5 - 185818997 ccctg i rheMac8.chr3 C 0 I 328 s macFas5.chr3 67301474 5 + 192294377 ccctg i macFas5.chr3 I 328 C 0 s macNem1.NW_012011522v1 2783062 5 + 3123512 ccctg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503705 5 + 10077455 ccctg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709699 5 + 127223203 ccctg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1176311 5 - 1799296 ccctg i manLeu1.NW_012105809v1 C 0 T 6035 s colAng1.NW_012115910v1 1753537 5 + 6934359 ccccg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112959 5 - 128169293 cccca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730624 5 - 18371965 cccca i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390184 5 + 3566421 cccca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891994 5 - 9267652 cccca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752215 5 + 14340318 cccca i otoGar3.GL873564 C 0 I 4 e canFam3.chr18 51761325 1320 - 55844845 I a score=80086.000000 s hg38.chr22_KI270732v1_random 15041 8 + 41543 agacagct s panTro5.chr2B 114760812 8 - 133216015 agacagct i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703674 8 - 135337776 agatagct i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129562 8 + 150013 agacagct i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163649 8 - 81552678 agacagct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471797 8 - 185818997 agacagct i rheMac8.chr3 I 328 C 0 s macFas5.chr3 67301479 8 + 192294377 agacagct i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783067 8 + 3123512 agatagct i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2503710 8 + 10077455 agacagct i cerAty1.NW_012000909v1 C 0 I 316 s chlSab2.chr21 5709704 8 + 127223203 agacagct i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170281 8 - 1799296 agacagcg i manLeu1.NW_012105809v1 T 6035 C 0 s colAng1.NW_012115910v1 1753542 8 + 6934359 agacagct i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112964 8 - 128169293 agagagtt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730629 8 - 18371965 agagagct i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390189 8 + 3566421 agagagct i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1891999 8 - 9267652 agagagtt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752224 8 + 14340318 agacaact i otoGar3.GL873564 I 4 C 0 e canFam3.chr18 51761325 1320 - 55844845 I a score=24752.000000 s hg38.chr22_KI270732v1_random 15049 2 + 41543 tt s panTro5.chr2B 114760820 2 - 133216015 tt i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703682 2 - 135337776 tt i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129570 2 + 150013 tt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163657 2 - 81552678 tt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471805 2 - 185818997 tt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301487 2 + 192294377 tt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783075 2 + 3123512 tt i macNem1.NW_012011522v1 C 0 I 328 s cerAty1.NW_012000909v1 2504034 2 + 10077455 tt i cerAty1.NW_012000909v1 I 316 C 0 s chlSab2.chr21 5709712 2 + 127223203 tt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170289 2 - 1799296 tt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753550 2 + 6934359 tt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112972 2 - 128169293 tt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730637 2 - 18371965 tt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390197 2 + 3566421 tt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892007 2 - 9267652 tt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752232 2 + 14340318 tt i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51761325 1320 - 55844845 I a score=49100.000000 s hg38.chr22_KI270732v1_random 15051 9 + 41543 gcagc-taag s panTro5.chr2B 114760822 9 - 133216015 gcagc-tatg i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703684 9 - 135337776 gcagc-taag i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129572 9 + 150013 gcaga-taag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163659 9 - 81552678 gcagc-catg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471807 9 - 185818997 gcagc-tttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301489 9 + 192294377 gcagc-tttt i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504036 9 + 10077455 gcagc-tttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709714 10 + 127223203 gcagcatttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170291 9 - 1799296 gcagc-tttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753552 9 + 6934359 gcagc-tttt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112974 9 - 128169293 gcagc-tatt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730639 9 - 18371965 gcagc-tctt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390199 9 + 3566421 gcagc-tatt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892009 9 - 9267652 gcagc-taat i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752234 9 + 14340318 taagc-tatt i otoGar3.GL873564 C 0 C 0 e macNem1.NW_012011522v1 2783077 328 + 3123512 I e canFam3.chr18 51761325 1320 - 55844845 I a score=463014.000000 s hg38.chr22_KI270732v1_random 15060 48 + 41543 tttgcatttccagcctttctcaatagccattttgaaatatatcaagga s panTro5.chr2B 114760831 48 - 133216015 tttgcatttccagcccttctcaatagccattttgaaatatatcaagga i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703693 48 - 135337776 tttgcatttccagcccttctcaatagccattttgaaatatatcaagga i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129581 48 + 150013 tttgcatttccagcccttctcaatacccattttgaaatatatcaagga i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163668 48 - 81552678 tttgcatttccagcccttctgaatagccattttgaaatatatcaagga i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471816 46 - 185818997 tttgcatttccagccc-tctgaatagcca-tttgaaatatatcaagga i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301498 46 + 192294377 tttgcatttccagccc-tctgaatagcca-tttgaaatatatcaagga i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783405 45 + 3123512 tttgcatttccagccc-tctgaatagcca-tttgaaa-atatcaagga i macNem1.NW_012011522v1 I 328 C 0 s cerAty1.NW_012000909v1 2504045 46 + 10077455 tttgcatttccagccc-tctgaatagcca-tttgaaatatatcaagga i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709724 46 + 127223203 tttacattttcagcct-tctgaatagcca-tttgaaatatatcaagga i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170300 46 - 1799296 tttgcatttccagccc-tctgaatagcca-tttgaaatatatcaagga i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753561 46 + 6934359 tttgcatttccagccc-tctgaagagcca-tttgaaatatatcaagga i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108112983 48 - 128169293 tttgcatttccagcccttctgaatagccattttgaaatatgtcaagga i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730648 48 - 18371965 tttgcatttccagcccttctgaatagccattttgaaatatgccaagga i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390208 44 + 3566421 tttgcatttccagccccc----atagtcattttgaaatatgtcaagga i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892018 48 - 9267652 tttgcatttccagcccttctgaatagccactttgaaataggtcaagga i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752243 48 + 14340318 tttgcatttccagcccttctgaatagctgacttgaaatatgtcaagga i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51761325 1320 - 55844845 I a score=626551.000000 s hg38.chr22_KI270732v1_random 15108 66 + 41543 aatatatttag----ggg--------------------------------------------------------------------------taaaatatattagtttccttcaTACAGCTATAAAACATACAGGAATAATTTT---- s panTro5.chr2B 114760879 66 - 133216015 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattagtttccttcaTACAGCTATAAAACATGCAGGAATAATTTT---- i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703741 66 - 135337776 aatatatttag----ggg--------------------------------------------------------------------------taaaatatattagtttccctcaTAAAGCTATAAAACATACAGTAATAATTTT---- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129629 66 + 150013 aatatatttag----ggg--------------------------------------------------------------------------taaaatatattagtttccttcaTACAGCTATAAAACATACAGGAATAATTTT---- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163716 66 - 81552678 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGGTATAAAACATACAGGAATAATTTT---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471862 66 - 185818997 aacatattttg----ggg--------------------------------------------------------------------------taaaatatgttgatttccttcaTACAGCTATAAAACATAAAGAAATAATTTT---- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301544 66 + 192294377 aacatattttg----ggg--------------------------------------------------------------------------taaaatatgttgatttccttcaTACAGCTATAAAACATAAAGAAATAATTTT---- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783450 64 + 3123512 aacata-tttg----ggg--------------------------------------------------------------------------taaaatatgttgattt-cttCATACAGCTATAAAACATAAAGAAATAATTTT---- i macNem1.NW_012011522v1 C 0 I 249 s cerAty1.NW_012000909v1 2504091 66 + 10077455 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCCATAAAACATAAAGAAATAATTTT---- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709770 66 + 127223203 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCTATAAAACATAGAGAAATAATTTT---- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170346 66 - 1799296 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCCATAAAACATAAAGAAATAATTTT---- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753607 66 + 6934359 aatatattttg----ggg--------------------------------------------------------------------------taaaatatattggtttccttcaTACAGCTATAAAACATAGAGAAATAATTTT---- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113031 66 - 128169293 aatattttttg----ggg--------------------------------------------------------------------------tgaaatatattggttttcttcaTACAGCTATAAAACATAGACATATAATTTT---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 730696 62 - 18371965 aatatatttta----ggg--------------------------------------------------------------------------tgaaatatattggtcttcttcaTACAGCTATAAAACATAA----ATAATTTT---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390252 66 + 3566421 aatatatttta----ggg--------------------------------------------------------------------------tgaaatatattggttttcttcaTACAGCTATAAAACATAGATAAATAATTTT---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892066 66 - 9267652 aatatatttta----ggg--------------------------------------------------------------------------tgaaatatattggttttcttGATACAGCTATAAAACATAGATAAATAATTTT---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752291 136 + 14340318 aatacattttg----gggtgaaatattttTTTTTATTGAATGGTAACTATGTACATTAATGCACTTCTGGGGTACAGTGTGGGGTTTTCACATGAAATATTTTGGTTTGCTTCATATGGCTATTGAATATACAG----AATTTT---- i otoGar3.GL873564 C 0 I 2 s canFam3.chr18 51762645 73 - 55844845 AAGATATTAAGAATCAGG--------------------------------------------------------------------------TAATGTATA-TATTTTTGGTTGTATGCTTAGAGAACATAGAGAAATAATATTTTTT i canFam3.chr18 I 1320 C 0 a score=2200795.000000 s hg38.chr22_KI270732v1_random 15174 279 + 41543 TGTGAATGTCTACTACAAATCCAATATGGCTGTAATTATAAAACCCCCCAGATATTGAAGAAAAAATA--TGTAGAGT---ACATC-ACT--TACAAATGTTGAT-----ACTAAAATCCCAAATAAAATAAAAATAATATACAACAACATTTGAAACAGTAAGACAAGAAATTGGCaaaaaaaaaaaaaaaaaaaaaacaacaaaTATCCACCTTGGGGATGAAAATGTGTT--------------------TCCAAATTCGGTAATCCAATAATATTAATAATC--ATATTGATTAGCCCAAATTAAAAATA s panTro5.chr2B 114760945 269 - 133216015 TCTCAATGTCTACTACAAATCCAATATAGCAGTAATTATAAAACCCACCAGATATTGAAGAAAAAATA--TGTAGAGT---ACATC-ACT--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATATCCAACAGTATTTGAAACAGTAAGACAAGAAATTGGCaaaaaaaaaaaaa----------aacaaaTATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGCCCAAATAAAAAATA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82703807 268 - 135337776 TGTCAATGTCTACTACAAATCCAATATAGCAGTAATTATAAAACCCACCAGATATTGAAGAAAAACTA--TGTAGAGT---ACCTC-AAT--TACAAATGTTGAT-----ACTAAAATGCTAAATAAAATAAAAATAATATCCAACAATATTTGAAACAGTAAGACAAGAAATTGGCAAAAAAAAAATAA----------AAAGAA-ATCCACCTTGGGAGAGAAAGTGTGTT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGCCCAAATTAAAAATA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129695 265 + 150013 TGTCAATGTCTACTACAAATCCAATATAGCTGTAATTATAAAACCCACCAGATATTGAAGAAAAAATA--TGTAGAGT---ACATC-ACT--TACAAATGTTGAT-----ACTAAAATGC-AAATAAAATAAAAATAATATCCAACAATATTTGAAACAGTAAGACAAGAAATTGGCAAAAAAAAAA-------------AACAAATATCCACCTTGGGGATGAAAGTGTGTT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGCCCAAATTAAAAATA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40163782 268 - 81552678 TGTCAATGTCTTCTACAAATCCAATATAGCAGTAATTATAAAACCCACCAGATATTGAAGAAAAAATA--TCTAGAGT---ACATC-ACT--TACAAATATTTAT-----ACTAAAATGCCAAAGAAAATAAAAATAATATCCAACAATATTTGAAAGAGTAAGACAAGAAATTAGCAAAAATAAATGA-----------AACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------ACCAAATTTGGTAATCCAATAAAATTAATAATT--ATATTGATTAGCCCAAATAAAAAATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133471928 265 - 185818997 TGTCAATATCTACTACAGATCCAATATAGCAGTAATTATAAAATCCACCAGATATTGAAGAAAAAATA--TGTAGAGT---ATCTC-ACT--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCGACAATATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAA-------------AGCAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGACCAAATAAAAAATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301610 265 + 192294377 TGTCAATATCTACTACAGATCCAATATAGCAGTAATTATAAAATCCACCAGATATTGAAGAAAAAATA--TGTAGAGT---ATCTC-ACT--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCGACAATATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAA-------------AGCAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGTAATCCAATAATATTAATAATC--ATATTGATTAGACCAAATAAAAAATA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504157 261 + 10077455 TGTCAATATCTATTACAGATCCAATATAGCAGTAATTATAAAACCCACCAGATACTGAAGAAAAAATA--TGTAGAGT---GTCTC-------ACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCAACAATATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAA-------------AACAAATATCTACCTTGGGGATGAAAGTGTGAT--------------------TACAAATTTGGTAATCCAATAATATTAATAATC--ATATTCATTAGACCAAATAAAAAATA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5709836 261 + 127223203 TGTCAATATCTACTACAGATCCAATACAGCAGTAATTACAAAACCCACCAGATATTGAAGAAAAAATA--TGTAGAGT---ATCTC-------ACAAATATTGAT-----ATTAAAATGCCAAATAAAATAAAAATAATCTCCAACAGTATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAA-------------AACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------TCCAAATTTGGtaatccaatcatattaataatc--atattcatTAGACCAAATAAAAAATA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170412 265 - 1799296 TGTCAATATCTACTACGGATCCAATATAGCAGTAATTATAAAACCCACCAGATACTGAAGAAAAAATA--TGTAGAGT---ATCTC-ACT--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCAACAATATTTGAAACAGTAAGACAAGAAACT-GCAAAACAATAA-------------AACAAATATCTACCTTGGGGATGAAAGTGTGAT--------------------TACAAATTTGGTAATCCAATAATATTAATAATC--ATATTCATTAGACCAAATAAAAAATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753673 256 + 6934359 TGCCAATATCTACTACAGATCCAATATAGCAGTAATTATAAAACCCACCAGATACTGAAGAAAAAATA---------------CTCTACA--TACAAATATTGAT-----ACTAAAATGCCAAATAAAATAAAAATAATCTCCAACAACATCTGAAACAGTAAGACAAGAAACT-GCAAAACAATAA-------------AACAAATATCTACCTTGGGGATGAAAGTATGAT--------------------TCCAAATTTGGtaatctaataatagtaataatc--atattcatTAGACCAAATAAAAAATA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113097 284 - 128169293 TGTTAATATCTTCTACAAATCCAGTATAGCAGTA---ATAAAACCCAGCAGATATTGAAGAAAAAATA--TGTAGAGT---ACATC-ACT--TACAAATATTGATACTAAACTAAAATGCCAAATAAAATAAAAATAATTTCCAACAATATTTGAAGCAGTAATACAAGAAATTAGCAAAAAA---A-------------ATTAAATATCCACCTTGGGGATGAAAGTG-GATAAAAATTTCCAAATTTTTCATCCAAATTTTGAAATCCAATAAAATTAACAATC--GTATTGATTATACAAAATAAAAAATA i calJac3.chr8 C 0 I 283 s saiBol1.JH378145 730758 273 - 18371965 TGTTAATATCTTCTACAAATCCAATATAGCAGTAAATATAAAACCCAGCAGATACTGAAGAAAAAATA--TGTAGAGT---ACATC-ACTTATACAAATATTGATACTAAACTAAAATGCCAAATAAAATAAAAATAATTTCCAACAATATTTGAAATGGTAATACAAGAAATTAGCAAAAAAATTA-------------AACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------CCCAAATTTGGAAATCCAATAATATTCACAATC--ATATTCATTAGACAAATTAAAAAATG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390318 268 + 3566421 TGTTAATATCTTCTACAAATCCAATATAGCAGTAAATATAAAACCTAGAAGATACTGAAGAAAAAATA--TGTAGAGT---ACATC-ACT--TACAAATATTGATACTAAACTAAAATGCC-AATGCAATAGAAATAATTTCTAATAATATTTGAAAC--TAATACAAGCAATTAGCAAAAAAATTA-------------AACAAATATCCACCTTGGGGATGAAAGTGTGAT--------------------CCCAAATTTGGAAATCCAATAAAATTAACAATC--ATATTGATTAGACAAAATAAAAAATA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892132 255 - 9267652 TGTTAATATCTTCTACAAATCCAATATAGCAGTAAATATAAAACTCAGC------------AAAAATA--TGTAGAGT---ACATC-ACT--TACAAATATTGATACTAAACTAAAATGCCAAATAAAATAAAAATAATTTCCAACAATACCTGAAACAGTAATACAAGAAATTCACAAAAAAATTA-------------AACAAATATCTACCTTTGGGATGAAAGTGTGAT--------------------CCCAAATTTGGTAATCCAATAAAATTAACAATC--ATATTGATTAGACAGAATAAAA---- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752429 241 + 14340318 CGCCAATT-----------TTCAATACAGTTAtaacattaaaacccaacaggtactgtaaaaaa---a--tgcagagtaaaatatc-act--tacaaatattgat-----acaaaaaggcctgataaaataaaaat-------------atgtgaaatattagaatgagaaatt---aataagattt-------------aatagattttcaccttacaaatgaaagtgtgat--------------------ttcacattagataattccataacaaaaataatcatatattaatcagatcaaataaaaaata i otoGar3.GL873564 I 2 C 0 s canFam3.chr18 51762718 247 - 55844845 TGCTAATTCCTTCTATAAATCCAATATTGCAGTAATTATAAAATGTAACGGATATTATAAAAAATATATGTGTAGAGTGCAATATG-ACT--TATAAATATTTAT-----ACAAAAATGCC-----AAACAAAAGTAATCTACAACAGTATTTGAAACATCCATACAAAAAAGC------AATATTA-------------AGCAAATTTTCACCTTT-GAATTCAAATGTAAT--------------------TCTG--------AATCAAATGATATAAATAACC--TTATTAATTAGAATAGATAAAA---- i canFam3.chr18 C 0 C 0 e macNem1.NW_012011522v1 2783514 249 + 3123512 I a score=66879.000000 s hg38.chr22_KI270732v1_random 15453 10 + 41543 AATAGGGTAT s panTro5.chr2B 114761214 10 - 133216015 AATAGGGGAT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704075 9 - 135337776 AA-GGGGGAT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129960 10 + 150013 AATAGGGGAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164050 10 - 81552678 AATAGGTGAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472193 10 - 185818997 AATAGGAGAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301875 10 + 192294377 AATAGGAGAT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504418 10 + 10077455 AATAGGAGAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710097 10 + 127223203 AATAGGAGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170677 10 - 1799296 AATAGGAGAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753929 10 + 6934359 AATAGAAGAT i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 731031 10 - 18371965 AAGAGAGGAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390586 10 + 3566421 AAGAGAGGAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892387 10 - 9267652 AATAGAGGAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752670 10 + 14340318 tgtatgggct i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762965 10 - 55844845 AATAGGAGAT i canFam3.chr18 C 0 C 0 e calJac3.chr8 108113381 283 - 128169293 I e macNem1.NW_012011522v1 2783514 249 + 3123512 I a score=285642.000000 s hg38.chr22_KI270732v1_random 15463 27 + 41543 TCTCAGTACATGCT-AAA-ATATATTtgt s panTro5.chr2B 114761224 27 - 133216015 TCTCAGTACACGCT-AAA-ATATATTTGT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704084 27 - 135337776 TCTCAGTACATGCT-GAA-GTATATTTGT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129970 27 + 150013 TCTCAGTACATGCT-AAA-ATATATTTGT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164060 27 - 81552678 TCTCAGTACATGCT-AAA-ATATATTTGT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472203 27 - 185818997 TCTCAGTACATGCT-AAA-ATATATTTGT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301885 27 + 192294377 TCTCAGTACATGCT-AAA-ATATATTTGT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2783763 27 + 3123512 TCTCAGTACATGCT-AAA-ATATATTTGT i macNem1.NW_012011522v1 I 249 I 290 s cerAty1.NW_012000909v1 2504428 27 + 10077455 TCTCAGTACATGCT-AAA-ATATATTTGT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710107 27 + 127223203 TCTCAGTACATGCT-AAA-ATATATTTGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170687 27 - 1799296 TCTCAGTACATGCT-AAA-ATATATTTGT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753939 27 + 6934359 TCTCAGTACATGCT-AAA-ATATAGTTGT i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 731041 27 - 18371965 TCTCAGTACATGCA-AAA-ACATTTTTGT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390596 27 + 3566421 TCTCAGTACATGCT-AAA-ACATTTTTGT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892397 27 - 9267652 TCTCAGTACATGCT-AAA-ACGTATTTGT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752680 28 + 14340318 tcttaatatatgcc-aaatatgtatttgt i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51762975 28 - 55844845 TCTCAATATATGCTGAAA-GTATATTTAT i canFam3.chr18 C 0 C 0 e calJac3.chr8 108113381 283 - 128169293 I a score=10920.000000 s hg38.chr22_KI270732v1_random 15490 1 + 41543 t s panTro5.chr2B 114761251 1 - 133216015 T i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704111 1 - 135337776 T i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 129997 1 + 150013 T i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164087 1 - 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472230 1 - 185818997 T i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301912 1 + 192294377 T i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504455 1 + 10077455 T i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710134 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170714 1 - 1799296 T i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753966 1 + 6934359 T i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 731068 1 - 18371965 T i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390623 1 + 3566421 T i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892424 1 - 9267652 T i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752708 1 + 14340318 t i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763003 1 - 55844845 T i canFam3.chr18 C 0 C 0 e calJac3.chr8 108113381 283 - 128169293 I e macNem1.NW_012011522v1 2783790 290 + 3123512 I a score=1694.000000 s hg38.chr22_KI270732v1_random 15491 1 + 41543 a s panTro5.chr2B 114761252 1 - 133216015 A i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704112 1 - 135337776 A i panPan2.chr12 C 0 C 0 s saiBol1.JH378145 731069 1 - 18371965 A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390624 1 + 3566421 A i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892425 1 - 9267652 A i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752709 1 + 14340318 a i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763004 1 - 55844845 G i canFam3.chr18 C 0 I 6 e calJac3.chr8 108113381 283 - 128169293 I e colAng1.NW_012115910v1 1753967 0 + 6934359 C e manLeu1.NW_012105809v1 1170715 0 - 1799296 C e chlSab2.chr21 5710135 0 + 127223203 C e cerAty1.NW_012000909v1 2504456 0 + 10077455 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I e rheMac8.chr3 133472231 0 - 185818997 C e macFas5.chr3 67301913 0 + 192294377 C e nomLeu3.chr19 40164088 0 - 81552678 C e gorGor5.CYUI01000341v1 129998 0 + 150013 C a score=3822.000000 s hg38.chr22_KI270732v1_random 15492 2 + 41543 aa s panTro5.chr2B 114761253 2 - 133216015 AA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704113 2 - 135337776 AA i panPan2.chr12 C 0 C 0 s saiBol1.JH378145 731070 2 - 18371965 AA i saiBol1.JH378145 C 0 I 5 s cebCap1.NW_016107540v1 1390625 2 + 3566421 AA i cebCap1.NW_016107540v1 C 0 I 13 s aotNan1.NW_018514471v1 1892426 2 - 9267652 AA i aotNan1.NW_018514471v1 C 0 I 5 s otoGar3.GL873564 12752710 2 + 14340318 aa i otoGar3.GL873564 C 0 C 0 e calJac3.chr8 108113381 283 - 128169293 I e colAng1.NW_012115910v1 1753967 0 + 6934359 C e manLeu1.NW_012105809v1 1170715 0 - 1799296 C e chlSab2.chr21 5710135 0 + 127223203 C e cerAty1.NW_012000909v1 2504456 0 + 10077455 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I e rheMac8.chr3 133472231 0 - 185818997 C e macFas5.chr3 67301913 0 + 192294377 C e canFam3.chr18 51763005 6 - 55844845 I e nomLeu3.chr19 40164088 0 - 81552678 C e gorGor5.CYUI01000341v1 129998 0 + 150013 C a score=1746.000000 s hg38.chr22_KI270732v1_random 15494 3 + 41543 agg s panTro5.chr2B 114761255 3 - 133216015 AGG i panTro5.chr2B C 0 I 2 s panPan2.chr12 82704115 3 - 135337776 AGG i panPan2.chr12 C 0 C 0 s otoGar3.GL873564 12752712 3 + 14340318 aGG i otoGar3.GL873564 C 0 C 0 e calJac3.chr8 108113381 283 - 128169293 I e aotNan1.NW_018514471v1 1892428 5 - 9267652 I e cebCap1.NW_016107540v1 1390627 13 + 3566421 I e saiBol1.JH378145 731072 5 - 18371965 I e colAng1.NW_012115910v1 1753967 0 + 6934359 C e manLeu1.NW_012105809v1 1170715 0 - 1799296 C e chlSab2.chr21 5710135 0 + 127223203 C e cerAty1.NW_012000909v1 2504456 0 + 10077455 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I e rheMac8.chr3 133472231 0 - 185818997 C e macFas5.chr3 67301913 0 + 192294377 C e canFam3.chr18 51763005 6 - 55844845 I e nomLeu3.chr19 40164088 0 - 81552678 C e gorGor5.CYUI01000341v1 129998 0 + 150013 C a score=429.000000 s hg38.chr22_KI270732v1_random 15497 4 + 41543 caat s panPan2.chr12 82704118 4 - 135337776 CAAT i panPan2.chr12 C 0 C 0 s otoGar3.GL873564 12752715 4 + 14340318 TTAT i otoGar3.GL873564 C 0 C 0 e calJac3.chr8 108113381 283 - 128169293 I e aotNan1.NW_018514471v1 1892428 5 - 9267652 I e cebCap1.NW_016107540v1 1390627 13 + 3566421 I e saiBol1.JH378145 731072 5 - 18371965 I e colAng1.NW_012115910v1 1753967 0 + 6934359 C e manLeu1.NW_012105809v1 1170715 0 - 1799296 C e chlSab2.chr21 5710135 0 + 127223203 C e cerAty1.NW_012000909v1 2504456 0 + 10077455 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I e rheMac8.chr3 133472231 0 - 185818997 C e macFas5.chr3 67301913 0 + 192294377 C e canFam3.chr18 51763005 6 - 55844845 I e panTro5.chr2B 114761258 2 - 133216015 I e nomLeu3.chr19 40164088 0 - 81552678 C e gorGor5.CYUI01000341v1 129998 0 + 150013 C a score=0.000000 s hg38.chr22_KI270732v1_random 15501 92 + 41543 tagtgggtgcagcgcaccagcatggcacatgtatacatatgtaactaacctgcacaatgtgcacatgtaccctgaaacttagagtataataa e calJac3.chr8 108113381 283 - 128169293 I e aotNan1.NW_018514471v1 1892428 5 - 9267652 I e cebCap1.NW_016107540v1 1390627 13 + 3566421 I e saiBol1.JH378145 731072 5 - 18371965 I e otoGar3.GL873564 12752719 0 + 14340318 C e colAng1.NW_012115910v1 1753967 0 + 6934359 C e manLeu1.NW_012105809v1 1170715 0 - 1799296 C e chlSab2.chr21 5710135 0 + 127223203 C e cerAty1.NW_012000909v1 2504456 0 + 10077455 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I e rheMac8.chr3 133472231 0 - 185818997 C e macFas5.chr3 67301913 0 + 192294377 C e canFam3.chr18 51763005 6 - 55844845 I e panTro5.chr2B 114761258 2 - 133216015 I e nomLeu3.chr19 40164088 0 - 81552678 C e gorGor5.CYUI01000341v1 129998 0 + 150013 C e panPan2.chr12 82704122 0 - 135337776 C a score=1062.000000 s hg38.chr22_KI270732v1_random 15593 32 + 41543 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa----------------------------- s calJac3.chr8 108113664 61 - 128169293 aaaaaaaaaaaaaaaaaaaaaaaaaTAGAGGATTCTAAGTACATGCTAAAGCATTTTTGTT i calJac3.chr8 I 283 C 0 e aotNan1.NW_018514471v1 1892428 5 - 9267652 I e cebCap1.NW_016107540v1 1390627 13 + 3566421 I e saiBol1.JH378145 731072 5 - 18371965 I e otoGar3.GL873564 12752719 0 + 14340318 C e colAng1.NW_012115910v1 1753967 0 + 6934359 C e manLeu1.NW_012105809v1 1170715 0 - 1799296 C e chlSab2.chr21 5710135 0 + 127223203 C e cerAty1.NW_012000909v1 2504456 0 + 10077455 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I e rheMac8.chr3 133472231 0 - 185818997 C e macFas5.chr3 67301913 0 + 192294377 C e canFam3.chr18 51763005 6 - 55844845 I e panTro5.chr2B 114761258 2 - 133216015 I e nomLeu3.chr19 40164088 0 - 81552678 C e gorGor5.CYUI01000341v1 129998 0 + 150013 C e panPan2.chr12 82704122 0 - 135337776 C a score=3276.000000 s hg38.chr22_KI270732v1_random 15625 1 + 41543 a s nomLeu3.chr19 40164088 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472231 1 - 185818997 A i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301913 1 + 192294377 A i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504456 1 + 10077455 A i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710135 1 + 127223203 A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170715 1 - 1799296 A i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753967 1 + 6934359 A i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113725 1 - 128169293 A i calJac3.chr8 C 0 C 0 e aotNan1.NW_018514471v1 1892428 5 - 9267652 I e cebCap1.NW_016107540v1 1390627 13 + 3566421 I e saiBol1.JH378145 731072 5 - 18371965 I e otoGar3.GL873564 12752719 0 + 14340318 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I e canFam3.chr18 51763005 6 - 55844845 I e panTro5.chr2B 114761258 2 - 133216015 I e gorGor5.CYUI01000341v1 129998 0 + 150013 C e panPan2.chr12 82704122 0 - 135337776 C a score=24508.000000 s hg38.chr22_KI270732v1_random 15626 7 + 41543 aaaGGCA s gorGor5.CYUI01000341v1 129998 7 + 150013 AAAGGCA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164089 7 - 81552678 AAAGGTA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472232 7 - 185818997 AAAGGTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301914 7 + 192294377 AAAGGTA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504457 7 + 10077455 AAAGGTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710136 7 + 127223203 AAAGGTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170716 7 - 1799296 AAAGGTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753968 7 + 6934359 AAAGGTA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113726 7 - 128169293 AAGGGTT i calJac3.chr8 C 0 C 0 e aotNan1.NW_018514471v1 1892428 5 - 9267652 I e cebCap1.NW_016107540v1 1390627 13 + 3566421 I e saiBol1.JH378145 731072 5 - 18371965 I e otoGar3.GL873564 12752719 0 + 14340318 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I e canFam3.chr18 51763005 6 - 55844845 I e panTro5.chr2B 114761258 2 - 133216015 I e panPan2.chr12 82704122 0 - 135337776 C a score=19110.000000 s hg38.chr22_KI270732v1_random 15633 2 + 41543 AT s panTro5.chr2B 114761260 2 - 133216015 AT i panTro5.chr2B I 2 C 0 s panPan2.chr12 82704122 2 - 135337776 AT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130005 2 + 150013 AT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164096 2 - 81552678 AT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472239 2 - 185818997 AT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301921 2 + 192294377 AT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504464 2 + 10077455 AT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710143 2 + 127223203 AT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170723 2 - 1799296 AT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753975 2 + 6934359 AT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113733 2 - 128169293 AT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731077 2 - 18371965 AT i saiBol1.JH378145 I 5 C 0 s aotNan1.NW_018514471v1 1892433 2 - 9267652 AT i aotNan1.NW_018514471v1 I 5 C 0 s canFam3.chr18 51763011 2 - 55844845 AT i canFam3.chr18 I 6 C 0 e cebCap1.NW_016107540v1 1390627 13 + 3566421 I e otoGar3.GL873564 12752719 0 + 14340318 C e macNem1.NW_012011522v1 2783790 290 + 3123512 I a score=60039.000000 s hg38.chr22_KI270732v1_random 15635 6 + 41543 ATTCAT s panTro5.chr2B 114761262 6 - 133216015 ATTCAC i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704124 6 - 135337776 ATTCAT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130007 6 + 150013 ATTCAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164098 6 - 81552678 ATTCAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472241 6 - 185818997 ATTCAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301923 6 + 192294377 ATTCAT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504466 6 + 10077455 ATTCGT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710145 6 + 127223203 ATTCGT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170725 6 - 1799296 ATTCGT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753977 6 + 6934359 ATTCAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113735 6 - 128169293 ATTCAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731079 6 - 18371965 ATTCAT i saiBol1.JH378145 C 0 C 0 s aotNan1.NW_018514471v1 1892435 6 - 9267652 ATTCAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752719 6 + 14340318 ATTCAT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763013 6 - 55844845 ATTCAT i canFam3.chr18 C 0 C 0 e cebCap1.NW_016107540v1 1390627 13 + 3566421 I e macNem1.NW_012011522v1 2783790 290 + 3123512 I a score=680797.000000 s hg38.chr22_KI270732v1_random 15641 80 + 41543 GTCTTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATATGCAAACAT-----------------GTGTATGTCCATTAGAAGAAGAGAG--GC s panTro5.chr2B 114761268 80 - 133216015 GTCTTTAAAGATTTTAAATACTATAAAGAGTCTGATATTCTATATGCAAACAT-----------------GTGTATGTCCATTAGAAGAACAGAG--GC i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704130 80 - 135337776 GTTTTTAAAGATTTTAAATGCTATAAAGAATCTGATATTCTATATGCAAACAT-----------------GTGTATGTCCATTAGAAGAAGAGAG--GC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130013 80 + 150013 GTCTTTAAAGATTTTAAATGCTATAAAGAGTCTGATATTCTATATGCAAACAT-----------------GTGTATGTCCATTAGAAGAAGAGAG--GC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164104 77 - 81552678 GTCTTTAAAGATTTTAAATGCTATGAAGTGTCTGATATTCTATATACAAACGT-----------------GTGTGTGTCTATTAGAAG---AGAG--GC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472247 78 - 185818997 GTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAACAAAC-------------------GTGTATGTCTATTAGAAGAAAAGAG--GT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67301929 78 + 192294377 GTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAACAAAC-------------------GTGTATGTCTATTAGAAGAAAAGAG--GT i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2504472 78 + 10077455 GTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAGCAAAC-------------------GTGTATGTCTATTAGAAGAAAAGAG--GT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710151 78 + 127223203 GTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATGTTCTATAAGCAAAT-------------------GTGTATGTCTATTAGAAGAAAAGAG--GT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170731 78 - 1799296 GTATTTAAAGATTTTAAATGCTATAAAGAGTCCAATATTCTATAAGCAAAC-------------------GTGTATGTCTATTAGAAGAAAAGAG--GT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1753983 78 + 6934359 GTATTTAAATATTTTAAATGCTATGAAGAGTCAAATATTCTATAAGTAAAC-------------------GTGTATGTCTATTAGAAGAAAAGAG--GT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113741 80 - 128169293 GTCTTTAATGATTTTAAATGCCATAACGAGTTTGATATTCCATATGCAAACAT-----------------ATATATGCCTATTAGAAGAAGAGAG--CT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731085 80 - 18371965 GTCTTTAATGATTTTAAATGCTATAATGAGTCTGATATTCCATATGCAAACAT-----------------ATGTATGCCTATTAAAAGAAGAGAG--GC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390640 80 + 3566421 GTCTTTAATGATTTTAAATGCTACAACGAGGCTGATACTCCATATGCAAACAT-----------------GTGTAAGCCTATTAGAAGAAGAGAG--GT i cebCap1.NW_016107540v1 I 13 C 0 s aotNan1.NW_018514471v1 1892441 80 - 9267652 GTCTTTAATGACTTTAAATGCTATAACGAGTCTGATATTCCATATGCAAATAT-----------------CTGTATGCCTATTAGAAGAAGAGAG--GT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752725 80 + 14340318 GTATTCAAAGGCTCAAAAGGCCACAGAGAGTCTGATATTCCCCATACACAT-------------------TCGTATGTCTAGGAGAGGAAAAGAGAAGT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763019 97 - 55844845 GTCTTTAAGGGTAATAAAAGCTATAAAGAGTCTGATATTTTATACATATATACACATTTATGTCTAAGAAATATATGTCTAAGAGAGGGAGAGAG--AC i canFam3.chr18 C 0 I 137 e macNem1.NW_012011522v1 2783790 290 + 3123512 I a score=1301625.000000 s hg38.chr22_KI270732v1_random 15721 163 + 41543 CTGATTTTCATGTGTTACTACATAGAGA----TAGA-----GAAGTGGAT------AGATTAATTTGCATATGCATAGAGAAAGCATAAAATAGAAATTTACTGTCATA-TTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AAAGGTAAAATTTTAAATATTTT-TAACAGGTACAT s panTro5.chr2B 114761348 163 - 133216015 CTGATTTTTATATGTTACTACATAAAGG----TAGA-----GAAGTGAAT------AGATTAATTT-CATATGCATAGAGAAAGCATAAAATAGAAATTTACTGTCATACTTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AAAGGTAAAATTTTAAATATTTT-TAACAGTTACAT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704210 163 - 135337776 CTGATTTTCATATGTCACTACATAGAGA----TAGA-----GAAGTGGAT------AGATTAATTTGCATATGCATAGAGAAAACATAAAGTAGAAATTTACTATCATA-TTAAAGGAATTTTAATTCAACAATAAAATAATTC------------AAAGGTAAATATTTAAATATTTT-TAACAGGTACAT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130093 163 + 150013 CTGATTTTCATGTGTTACTACATAGAGA----TAGA-----GAAGCGGAT------AGATTAATTTGCATATGCATAGAGAAAGCATAAAATAGAAATTTACTATCATA-TTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AAAGGTAAGATTTTAAATATTTT-TAACAGGTACAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164181 162 - 81552678 CTGATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGTAT------AGATTAATTTGCATATGCATAGAGAAAGCAGAAAATAGAAATTTACTATCATACTTAAAGGAATTTAAATTCAACAATAAAATAATTC------------AAAGGTCAAATTTTAAATATTTT-TA--AGTTACAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472325 163 - 185818997 CTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGAT------AGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTT-TA-CAGTTACAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302007 163 + 192294377 CTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGAT------AGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTT-TA-CAGTTACAT i macFas5.chr3 C 0 I 50 s cerAty1.NW_012000909v1 2504550 163 + 10077455 CTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGAT------AGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTT-TA-CAGTTACAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5710229 163 + 127223203 CTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGAT------AGATTAATTTGCATATGCATAGATAAAGCATAAAATATAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTT-TA-CAGTTATAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170809 163 - 1799296 CTCATTTTCGTATGTTACTACATAGAGA----TAGA-----GAAGTGGAT------AGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATATGTAAAAGAATTTAAATTCAACAATAAAATAATTC------------AATGGTAAAATTTTAAATATTTT-TA-CAGTTACAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754061 161 + 6934359 CTCATTTTCATATGTTACTACATAGAGA----TAGA-----GAAGTGGAT------AGATTAATTTGCATATGCATAGAGAAAGCATAAAATACAAATTTACTATCATACTTAAAAGAATTTAAATTCAACA--AAAAAAATTC------------AATGGTAAAATTTTTAATATTTT-TA-CAGTTACAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113821 175 - 128169293 CTCATATTCATATGTTACTACATAGAGATTGTTCAA-----GAAGTGAAT------AGATTAATTTTCATATGCACAGAGTCAGTATAAAATTCAAATTTATTATA---CTTAAAGGAATTTAAATTCAAGAATTAAATAATTCAACGAT-TAAATAATGGtaaaattttaaatatttt-aa-taGTTGCAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731165 175 - 18371965 CTCATTTTCATATGTTACTACATACAGATTGTTAGA-----GAAGTGACT------AGATTAATTTGCATATGCATAGAGAAAGtataaaatacaaatttattata---cttaaaggaatttaaattcaagaataaaataattcaacaat-taaataatggtaaaattttaaatatttt-aa-taGTTGCAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390720 174 + 3566421 CTCATTTTCATATGTTACTACATAGAGATTATTAGA-----GAATTGAAT------AGATTAATTTGTATATGCATAGAGAAAGTATAAAATACAAATTTATTATA---CTTAAAGGAATTTAAATTCAAGAA-AAAATAACTCAATGAT-TAAATAATGGTAAAATTTTAACTATTTT-AA-TAGTTGCAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892521 177 - 9267652 CTCATTTTCATATGTTACTACATAGAGATTGTTAGA-----GAAGTGAAT------AGATTAATTTGTATATGCATAGAGAAAGTGTAAGATACAAATTTATTATCAT-ATTAAAGGAATTTAAATTCAAGAATAAAATAATTCAATGAT-TAAATAATAGTAAAATTTTAAATATTTT-AA-TAGTTGCAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12752805 178 + 14340318 CTTAGTCTTACTTTCTACTACGTAAATC----TAGACAGAGGAAACAGAA------GGATTAATTTTTACATGCATAAA-AAAACATCAACTG-AAACTTTTTACCAC-CTTAAAGAAAGTTAAATTCAGGAATAAAAAGTTTCAATGGCAAAAATAATGGTAAAATTGTACATATTTTGTA-TAGTTACAC i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763253 118 - 55844845 CTTATTTTCATATTTTACTAACCAGAGA----TAGA-----GAAATGCATATATAGATATTAGCTTGCATATGCACAGAGAAAACATCACATA---GTTTATTATCATATATAAAGGaaattaaaataaa-------------------------------------------------------------- i canFam3.chr18 I 137 C 0 e macNem1.NW_012011522v1 2783790 290 + 3123512 I a score=121678.000000 s hg38.chr22_KI270732v1_random 15884 15 + 41543 TATTAATATTAGATA s panTro5.chr2B 114761511 15 - 133216015 TATTAATATTAGATA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704373 12 - 135337776 TAT---TATTAGATA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130256 15 + 150013 TATTAATATTAGATA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164343 15 - 81552678 TATTAATATTAGATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472488 15 - 185818997 TATTAATATTAGATA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302220 15 + 192294377 TATTAATATTAGATA i macFas5.chr3 I 50 C 0 s macNem1.NW_012011522v1 2784080 15 + 3123512 TATTAATATTAGATA i macNem1.NW_012011522v1 I 290 C 0 s cerAty1.NW_012000909v1 2504713 15 + 10077455 TATTAATATTAGATA i cerAty1.NW_012000909v1 C 0 I 65 s chlSab2.chr21 5710392 12 + 127223203 TATTAATATTA---A i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1170972 15 - 1799296 TATTAATATTAGATA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754222 12 + 6934359 TATTAATGTTAG--- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108113996 15 - 128169293 CATTAATATTAGATC i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 731340 15 - 18371965 TATTAATATTAGATT i saiBol1.JH378145 C 0 I 3 s cebCap1.NW_016107540v1 1390894 15 + 3566421 TATTAATATTGGATC i cebCap1.NW_016107540v1 C 0 I 3 s aotNan1.NW_018514471v1 1892698 15 - 9267652 TATTAATATTAGATC i aotNan1.NW_018514471v1 C 0 I 3 s otoGar3.GL873564 12752983 15 + 14340318 TGTCGATATTGCATT i otoGar3.GL873564 C 0 I 3 e canFam3.chr18 51763371 0 - 55844845 C a score=144395.000000 s hg38.chr22_KI270732v1_random 15899 24 + 41543 ATATTTATAATAATTGTGAAAATA s panTro5.chr2B 114761526 21 - 133216015 ATATTTATAAT---TGTGAAAATA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704385 24 - 135337776 ATATTTATAATAATTGTGAAAATA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130271 24 + 150013 GTATTTATAATAATTGTGAAAATA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164358 24 - 81552678 TTATTTATAATAATTGTGAAAATA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472503 21 - 185818997 A---TTATAATAATTGTGAAAATA i rheMac8.chr3 C 0 I 47 s macFas5.chr3 67302235 18 + 192294377 ATATTTATAATAATTGTG------ i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784095 18 + 3123512 ATATTTATAATAATTGTG------ i macNem1.NW_012011522v1 C 0 C 0 s chlSab2.chr21 5710404 24 + 127223203 ATATTTATAATAATTGTGAAAATA i chlSab2.chr21 C 0 I 1 s manLeu1.NW_012105809v1 1170987 24 - 1799296 ATATTTATAATAATTGTGAAAATA i manLeu1.NW_012105809v1 C 0 I 47 s colAng1.NW_012115910v1 1754234 24 + 6934359 ATATTTATAATAATTGTGAAAATA i colAng1.NW_012115910v1 C 0 I 47 s calJac3.chr8 108114014 24 - 128169293 ACATTTATAATAATTATGAAAAAG i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 731358 23 - 18371965 ACATTTATAATAATTATGAAAAC- i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1390912 22 + 3566421 ACA--CATAATAATTATGAAAAAG i cebCap1.NW_016107540v1 I 3 C 0 s aotNan1.NW_018514471v1 1892716 24 - 9267652 ACTTTTATAATAACTATGAAAAAG i aotNan1.NW_018514471v1 I 3 C 0 s otoGar3.GL873564 12753001 24 + 14340318 ATATGTGTGATAACTGTGACAATA i otoGar3.GL873564 I 3 I 1 s canFam3.chr18 51763371 8 - 55844845 ----------------taaaaata i canFam3.chr18 C 0 C 0 e cerAty1.NW_012000909v1 2504728 65 + 10077455 I a score=-8464.000000 s hg38.chr22_KI270732v1_random 15923 2 + 41543 -TT s panTro5.chr2B 114761547 2 - 133216015 -TT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704409 2 - 135337776 -TT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130295 2 + 150013 -TT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164382 2 - 81552678 -TT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr21 5710429 1 + 127223203 -T- i chlSab2.chr21 I 1 I 45 s calJac3.chr8 108114038 1 - 128169293 -T- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731381 1 - 18371965 -T- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390934 1 + 3566421 -T- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892740 1 - 9267652 -T- i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753026 1 + 14340318 -T- i otoGar3.GL873564 I 1 C 0 s canFam3.chr18 51763379 2 - 55844845 tt- i canFam3.chr18 C 0 C 0 e colAng1.NW_012115910v1 1754258 47 + 6934359 I e manLeu1.NW_012105809v1 1171011 47 - 1799296 I e cerAty1.NW_012000909v1 2504728 65 + 10077455 I e macNem1.NW_012011522v1 2784113 0 + 3123512 C e rheMac8.chr3 133472524 47 - 185818997 I e macFas5.chr3 67302253 0 + 192294377 C a score=34270.000000 s hg38.chr22_KI270732v1_random 15925 7 + 41543 CAATGCT s panTro5.chr2B 114761549 7 - 133216015 CAATGCT i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704411 7 - 135337776 CAATGCT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130297 7 + 150013 CAATGCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164384 7 - 81552678 CAATGCT i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108114039 7 - 128169293 CAATGCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731382 7 - 18371965 CAATGCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390935 7 + 3566421 CAATGCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892741 7 - 9267652 CAATGCT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753027 7 + 14340318 CAATGCT i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763381 7 - 55844845 CAATGGT i canFam3.chr18 C 0 C 0 e colAng1.NW_012115910v1 1754258 47 + 6934359 I e manLeu1.NW_012105809v1 1171011 47 - 1799296 I e chlSab2.chr21 5710430 45 + 127223203 I e cerAty1.NW_012000909v1 2504728 65 + 10077455 I e macNem1.NW_012011522v1 2784113 0 + 3123512 C e rheMac8.chr3 133472524 47 - 185818997 I e macFas5.chr3 67302253 0 + 192294377 C a score=223362.000000 s hg38.chr22_KI270732v1_random 15932 24 + 41543 AAAAT-AAGATAGAATGTC---TAAACA s panTro5.chr2B 114761556 24 - 133216015 AAAAT-AAGATAGAATGTC---TAAACC i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704418 24 - 135337776 AAAAT-AAGAAACAATGTC---TAAACA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130304 24 + 150013 AAAAT-AAGATAGAATGTC---TAAACA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164391 24 - 81552678 AAAAT-AAGACAGAATGTC---TAAGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472571 24 - 185818997 AAAAT-AAAATAGAACATC---TAAACA i rheMac8.chr3 I 47 C 0 s macFas5.chr3 67302253 24 + 192294377 AAAAT-AAAATAGAACATC---TAAACA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784113 24 + 3123512 AAAAT-AAAATAGAACATC---TAAACA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2504793 24 + 10077455 AAAAT-AAAATAGAACATC---TAAACA i cerAty1.NW_012000909v1 I 65 C 0 s chlSab2.chr21 5710475 24 + 127223203 AAAAT-AAAATAGAACATC---TAAACA i chlSab2.chr21 I 45 C 0 s manLeu1.NW_012105809v1 1171058 24 - 1799296 AAAAT-AAAATAGAACATC---TAAACA i manLeu1.NW_012105809v1 I 47 C 0 s colAng1.NW_012115910v1 1754305 24 + 6934359 AAAAT-AAAAAAGAACATC---TAAACA i colAng1.NW_012115910v1 I 47 C 0 s calJac3.chr8 108114046 24 - 128169293 AAAAT-AAAATAGAAGGTC---TAAACA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731389 24 - 18371965 AAGATAAAAATAGAAGGTC---TAAA-A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390942 24 + 3566421 AAAAT-AAAATAGAAGGCC---TAAACA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892748 24 - 9267652 AAAAT-AAAACAGAAGGTC---TAAACA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753034 24 + 14340318 AAAAT-AAAGTAGAAAGTA---CAAGAA i otoGar3.GL873564 C 0 I 622 s canFam3.chr18 51763388 26 - 55844845 -AAAT-AAAAAATACAGTCATACAATCA i canFam3.chr18 C 0 C 0 a score=2565982.000000 s hg38.chr22_KI270732v1_random 15956 283 + 41543 TCAGTGTTAAAACTAGTATAAATATTTGCTTGTTTAT--------------ACAAGGAAAATTCAAGCTCGACCTAAAATTATATAGGAAATA-AAATAAAAATTTTAAGGGAGCTCTTTAATA-ACata--aac----atatatat----------atacacacccacatataacatgt-------atatatgttatatgggatagatataga----tttaacatgttatatctatatttgtatctat----------------aactacagctgtatgtatctacatttctatatatttactcagtgatataaatataGACTGGAATAAATATAAAGTCA s panTro5.chr2B 114761580 287 - 133216015 TCAGTATTAAAACTAGTATAAATATTTGCTTGTTTGT--------------ACAAAGAAAATTCAAGCTCAACCTAAAATTATATAGGAAATA-AAAGAAAAATTTTAAGGGAGCTCTTTAATA-acaca--aac----atatatat----------atacacacacacatataacatgc-------atatatgttatatgggatagatataga----tttaacatgttatatctatatttgtatctat------------ctatagctacagctgtatgtatctacatttctatatatttactcagtgatataaatataGACTGGAATAAATATAAAGGCA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704442 285 - 135337776 TCAGTTTTAAAACTCGTATTAATATTTGCTTGTTTAT--------------ACAAGGAAAATTCAAGCTCGACCTAAAATTGTATGGGGAATA-AAAGAAAAATTTTAAGGGAGCTCTTTAATA-ACataataat----atgtatat----------ataaacacacacatataacatgt-------atatatgttatatgggatagatataga----tttaacatgttatatctatatttgtatctat----------------aactacagctgtatacatctatattcctatatatttactcagtgatataaatataGACTGGAATAAATATAAAGACT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130328 282 + 150013 TCAGTATTAAAACTAGTATAAATATTTGCTTGTTTAT--------------ACAAGGAAAATTCAAGCTCGACCTAAAATTATATAGGAAATA-AAA-AAAAATTTTAAGGGAGCTCTTTAATA-ACata--aac----atatatat----------atacacacccacatataacatgt-------atatatgttatatgggatagatataga----tttaacatgttatatctatatttgtatctat----------------aactacagctgtatgtatctacatttctatatatttactcagtgatataaatataGACTGGAATAAATATAAAGGCA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164415 285 - 81552678 TCAGTATTAAAACTAGTATAAACATTTGCTTTTTTAT--------------ACAAGGAAAATTCAAGCTCAACCTAAAATTATATAGGAAATA-AAAGAAAAATTTTAAGGGATCTCTTTAATA-ACACA--AAC----ATATGTAT----------AT--ACACGCACATATAACATGT-------ATATATGTTATATGGGAtagatataga----tttaacatgttatatctatatttgtatctat------------CTATAACTACAGCTGTATGTATCTACATTTCTATATATTTACTCAGTGATATAAGTATAGACTGGAATAAATATAAAGGCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472595 285 - 185818997 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCTCTTTAata-ataca--aac----atatatat----acacacacatacacacatatataac--gt-------atatatgttacatgggatagacacaga----tttaacatgttatatctatatttgtatctat------------------ctatatctatatgtatctacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagaca i rheMac8.chr3 C 0 I 2 s macFas5.chr3 67302277 287 + 192294377 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCTCTTTAata-ataca--aac----atatatat----acacacacatacacacatatataacatgt-------atatatgttacatgggatagacacaga----tttaacatgttatatctatatttgtatctat------------------ctatatctatatgtatctacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagaca i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784137 287 + 3123512 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCTCTTTAata-ataca--aac----atatatat----acacacacatacacacatatataacatgt-------atatatgttacatgggatagacacaga----tttaacatgttatatctatatttgtatctat------------------ctatatctatatgtatctacatttctgtatgtttactcagttatgtaaatatagactggaataaatataaagaca i macNem1.NW_012011522v1 C 0 I 2 s cerAty1.NW_012000909v1 2504817 287 + 10077455 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCTCTGTAATA-ACACA--AAC----atatatatgaacacacacacatatacacatatataacatgt-------atatatgttacatgggatagatacaga----tttaacatgttatatctatatttg----tat------------------ctatatctatatgtatcaacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagaca i cerAty1.NW_012000909v1 C 0 I 2 s chlSab2.chr21 5710499 285 + 127223203 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTAT--------------ACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGCTCTTTAATA-ACACA--AAC----atatatat--acacacacacatatacacatatataacatgt-------atatatgttacatgggatagatacaga----tttaacatgttatatctatatttg----tat------------------ctatatctatatgtatctacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagaca i chlSab2.chr21 C 0 I 2 s manLeu1.NW_012105809v1 1171082 288 - 1799296 TCAGTATTAAAACTAGTATAAATATTTGCATGTTTA---------------ACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAACA-AAAGAAAAATTTTAAGGGAGTTCTGTAATA-acaca--aac----atatatat--acacacacacatatacacatatataacatgt-------atatatgttacatgggatagatacaga----tttaacatgttatatctatatttgtatctat------------------ctatatctatatgtatctacatttctatatgtttactcagttatgtaaatatagactggaataaatataaagaca i manLeu1.NW_012105809v1 C 0 I 2 s colAng1.NW_012115910v1 1754329 291 + 6934359 TCAGTATTAAAACTAGTGTAAATATTTGCATGTTTAT--------------ACAAGGAAAATTCAAGCTCAACCTAAAAATATATAGGAAAT-----GAAAAATGTTAAGGGAGCTCTTTAATA-ACACA--AAC----atatatat--acacacacacatatacacacatataacatgt-------atatatgttacatgggatagatacaga----tttaacatgttatatctatatttgtatctat------------ctataactatatctatatgtatctacatttctatatgtttactcagttatgtaaatataGACTGGACTAAATATAAAGACA i colAng1.NW_012115910v1 C 0 I 2 s calJac3.chr8 108114070 284 - 128169293 TCAGTATTAAAACTGGTATAAACATTTGCATTTTTAT--------------ACAACGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA-------AAGAATTTTAAGGGAGCTCTTTAATACacaca--cacacatatatatat--------acacacatacacacatgtaacatgc-------atatatTTTATATGG----GATATAGT----TTTAACATGTTATATCGATATTTGTATATCT------------CTATAACTATATCCATATGTATCTACATTTCTATATATTTACTCAGTTATAtaaagatagattggaataaatgtaaaggca i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731413 282 - 18371965 TCAGTATTAAAACTGGTATAAACATTTGCATTTTCAT--------------ACAATGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA-------AAGTATTATAAGGAAGCTCTTTAatacacaca--cac----atatgtat--------atacacatacacacatata--atgt-------atatatattatatgggatagatatagt----tttaacatgttatatcgatatttgtatctat------------ctataactatattcatatgtatctacatttctatatatttactcagttatataaagataaatTGGAGTAAATACAAAGGCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1390966 261 + 3566421 TCAGTATT-AAACTGGTATAAACATTTGCATTTTTAT--------------ACATCGAAAATTCAAGCTCAACCTAAAAACACATAAGAAA-------AAGAATTTTAAGGGAGCTCTTTAATACACACA--CAC----atatgtat--------atatacacacacacatataacatgt-------atatatattatatgggatagatttagt----tttaacatgt----------------------------------tataactatatacatatgtatctacatttctatatatTCATTCAGTTCTATAAAGATAGATTGGAATAAATATAAAGGCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1892772 272 - 9267652 TCAGTATA-AAACTGGTATAAACATTTGCATTTTTAT--------------ACAACAAAAATTCAAGCTCAACCTAGAAACACATAAGAAA-------AAGAATTTTAAGGGAGCTCTTTAATacacaca--cac--------------------acacacacacacacacacaACATGT-------Gtata---tatatgggatagatatagt----tttaacatgttatatcgatatttgtatctat------------ctataactatatccatatgtatctacatctctatatATTTACTCAGTTATAtaaagatagattggaataaatataaaggca i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12753680 303 + 14340318 TCAGAATCAAAATTAGAATCAATATTCAAGTTTGTAT--------------AATAGGAAAATTCAGGCTTAACCAAAAAATCTATAGAAAATG-GAAGAAAAATT-TAAGGTAGCTGTTTAATA-ACATA--TAG----ACACACAT--------ATA-ACATATAGATGAATAAGATGTGCTACCCACATGCATTATTTGAGATGGACACATATACCTTTAGTATGCT-----TATATTTGTACCTATTAAAAACTATATTCATGTCTATATCTGTATGTGTGTATATATATATA-ATTTACTCAGTTAAATAAATGTAGACCTGA-TAAATATAAAGACA i otoGar3.GL873564 I 622 C 0 s canFam3.chr18 51763414 241 - 55844845 TTGGTATTAAAGCTGGTATAAATATTTGGGTTTATATCATTATAATTCTAAAATAGGAAAATTCAAACTTAACCTAAATATTTATAGGAAATGCGAACAAAAAT--TGAGGTAGTTATTTCC---CCTTA--AAG----ATAGAAAG----------------------AGAGAAAGAGA-------ATAT---------------------------TTTAACTTATTATAGCTTCATCTTTATCTGT------------------------------TTATCAATATTTCTA----TCTACTCAGGCATATCAGAATAGACCTAAATCAATAGAAAGGCA i canFam3.chr18 C 0 C 0 a score=10585.000000 s hg38.chr22_KI270732v1_random 16239 3 + 41543 CAT s panTro5.chr2B 114761867 3 - 133216015 CAT i panTro5.chr2B C 0 I 2 s panPan2.chr12 82704727 3 - 135337776 CAT i panPan2.chr12 C 0 I 2 s gorGor5.CYUI01000341v1 130610 3 + 150013 CAT i gorGor5.CYUI01000341v1 C 0 I 2 s nomLeu3.chr19 40164700 3 - 81552678 CAT i nomLeu3.chr19 C 0 I 2 s rheMac8.chr3 133472882 1 - 185818997 --t i rheMac8.chr3 I 2 I 2 s macNem1.NW_012011522v1 2784426 1 + 3123512 --t i macNem1.NW_012011522v1 I 2 I 2 s cerAty1.NW_012000909v1 2505106 1 + 10077455 --t i cerAty1.NW_012000909v1 I 2 I 2 s chlSab2.chr21 5710786 1 + 127223203 --t i chlSab2.chr21 I 2 I 2 s manLeu1.NW_012105809v1 1171372 1 - 1799296 --t i manLeu1.NW_012105809v1 I 2 I 2 s colAng1.NW_012115910v1 1754622 1 + 6934359 --T i colAng1.NW_012115910v1 I 2 I 2 s calJac3.chr8 108114354 3 - 128169293 cat i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 731695 3 - 18371965 CAT i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1391227 3 + 3566421 CAT i cebCap1.NW_016107540v1 C 0 I 2 s aotNan1.NW_018514471v1 1893044 3 - 9267652 cat i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 12753983 3 + 14340318 CAT i otoGar3.GL873564 C 0 I 479 s canFam3.chr18 51763655 2 - 55844845 CA- i canFam3.chr18 C 0 C 0 e macFas5.chr3 67302564 0 + 192294377 C a score=91057.000000 s hg38.chr22_KI270732v1_random 16242 9 + 41543 GATTCTTGG s panTro5.chr2B 114761872 9 - 133216015 GATTCTTGG i panTro5.chr2B I 2 C 0 s panPan2.chr12 82704732 9 - 135337776 GATTGTTGG i panPan2.chr12 I 2 C 0 s gorGor5.CYUI01000341v1 130615 9 + 150013 GATTCTTGG i gorGor5.CYUI01000341v1 I 2 C 0 s nomLeu3.chr19 40164705 9 - 81552678 GATTCCTGG i nomLeu3.chr19 I 2 C 0 s rheMac8.chr3 133472885 9 - 185818997 GATTCTTGG i rheMac8.chr3 I 2 C 0 s macNem1.NW_012011522v1 2784429 9 + 3123512 GATTCTTGG i macNem1.NW_012011522v1 I 2 C 0 s cerAty1.NW_012000909v1 2505109 9 + 10077455 GATTCTTGG i cerAty1.NW_012000909v1 I 2 C 0 s chlSab2.chr21 5710789 9 + 127223203 GATTCTTGG i chlSab2.chr21 I 2 C 0 s manLeu1.NW_012105809v1 1171375 9 - 1799296 GATTCTTGG i manLeu1.NW_012105809v1 I 2 C 0 s colAng1.NW_012115910v1 1754625 9 + 6934359 GATTCTTGG i colAng1.NW_012115910v1 I 2 C 0 s calJac3.chr8 108114359 9 - 128169293 tattcttgg i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 731699 8 - 18371965 -ATTCTTGG i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1391232 9 + 3566421 GATTCTTGG i cebCap1.NW_016107540v1 I 2 C 0 s aotNan1.NW_018514471v1 1893049 9 - 9267652 gattcttgg i aotNan1.NW_018514471v1 I 2 C 0 s otoGar3.GL873564 12754465 9 + 14340318 GGTCCTTGG i otoGar3.GL873564 I 479 C 0 s canFam3.chr18 51763657 9 - 55844845 GATGattaa i canFam3.chr18 C 0 C 0 e macFas5.chr3 67302564 0 + 192294377 C a score=3652.000000 s hg38.chr22_KI270732v1_random 16251 1 + 41543 A s panTro5.chr2B 114761881 1 - 133216015 A i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704741 1 - 135337776 A i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130624 1 + 150013 A i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164714 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000909v1 2505118 1 + 10077455 A i cerAty1.NW_012000909v1 C 0 I 4 s calJac3.chr8 108114368 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731707 1 - 18371965 A i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391241 1 + 3566421 A i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893058 1 - 9267652 a i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754474 1 + 14340318 A i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51763666 1 - 55844845 a i canFam3.chr18 C 0 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C a score=227292.000000 s hg38.chr22_KI270732v1_random 16252 62 + 41543 T----------AAAAAGGATTTAGTATCATAAAAACAAATTCTTTCCAAATTCACC-TGTGAATTCACAACAA s panTro5.chr2B 114761882 62 - 133216015 T----------AAAAAGGATTTAGTATCACAAAGACAAATTCTTTCCAAATTCACC-TATGAATCCACAACAA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704742 63 - 135337776 TA---------AAAAAAGATTTAGTATCATAAAGACAAATTCTTTCCAAATTCACT-TATGAATTCACAACAA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130625 62 + 150013 T----------AAAAAGGATTTAGTATCACAAAAACAAATTCTTTCCAAATTCACC-TATGAATTCACAACAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164715 62 - 81552678 A----------TAAAAGGATTTAATATTATTAAGACAAATTCTTTCCAAATTCACC-TATCAATTCACAACAA i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108114369 62 - 128169293 t----------aaaaaggatttggtatcataaggacaaattctttccaaattcacc-tatcaattcacaacaa i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 731708 62 - 18371965 T----------AAAAAGGATTTGGTATCATAAAGACAATTTTTTTCCAAATTCATC-TATCAATTCACAACAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391242 62 + 3566421 T----------AAAAAGGATTTGGTATCATAAAGACAAATTCTTTCTAAATTCATC-GATCGATTCACAACAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893059 62 - 9267652 t----------gaaaaggatttggtatcataaagacaaattctttccaaattcatc-tatcgattcacaacaa i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12754475 61 + 14340318 T----------AAAAATGATTTGGAATTATAGAGAC-ACTTCCTCCCAAATTTATC-TATCAATTTATTACAA i otoGar3.GL873564 C 0 I 164 s canFam3.chr18 51763667 72 - 55844845 -aaaaaaaaaaaaaaaaGATCTAGTATCATAAGGACAAATTCTTCCCAAATTCATCTTATCAATTTATTGCAA i canFam3.chr18 C 0 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C a score=-864.000000 s hg38.chr22_KI270732v1_random 16314 1 + 41543 -T s panTro5.chr2B 114761944 1 - 133216015 -T i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704805 1 - 135337776 -T i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130687 1 + 150013 -T i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164777 1 - 81552678 -T i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108114431 1 - 128169293 -t i calJac3.chr8 C 0 I 5 s saiBol1.JH378145 731770 1 - 18371965 -T i saiBol1.JH378145 C 0 I 5 s cebCap1.NW_016107540v1 1391304 1 + 3566421 -T i cebCap1.NW_016107540v1 C 0 I 5 s aotNan1.NW_018514471v1 1893121 1 - 9267652 -t i aotNan1.NW_018514471v1 C 0 I 5 s canFam3.chr18 51763739 1 - 55844845 G- i canFam3.chr18 C 0 I 5 e otoGar3.GL873564 12754536 164 + 14340318 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C a score=1060583.000000 s hg38.chr22_KI270732v1_random 16315 329 + 41543 ATACAGTTTCATTAGTATAATTTA--A--AATTTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACATGTATACAAACAGTCAAGAAAGAAGC--AAGAGTGCACTAA------ACTAACTTGCTATTAAAATACATTTTTAAAC-TTAGTAACTGAAACTGAGCAGTACTGATTT-CCAATACTGGAATTTAGGTATCTGGGATCT--CAAAAGCACAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTG---CTTTAGAAGGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAG s panTro5.chr2B 114761945 329 - 133216015 ATACAGTTTCATTAGTATAATTTA--A--AATTTTTAAATAAATTCCAAGATTTATTTAAAGGAATATACATGTATACCAGCAGTAAAGAAAGAAGC--AAGAGTCAACTAA------ACTAACTTGTTATTAAAATACATTTTTAAAC-TTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCT--CAAAAGCATAGA-GCTCAAAG---------GAGACCCGTGTATGCGAGAGAGCTTAGGATGTG---CTTTAGAAGGCATTACGAAACCACGGGC--AAAGTTACTTTGGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAG i panTro5.chr2B C 0 C 0 s panPan2.chr12 82704806 329 - 135337776 ATACAGTTTCATTAGTATAATTTA--A--AATTGTTAAATAAATTCCAAGATTCATTTAAAGGAATATACATGTATAGAAGCAGTCAAGAAAGAAGC--AAGAGTGCACTAA------ACTAATTTGCTATTAAAATACATTTTTAAAC-TTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCT--CAAAAGCACAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTG---CTTTAGAAGGCATTAGCAAACCACGGGC--AAAGTTCCTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 130688 329 + 150013 ATACAGTTTCATTAGTATAATTTA--A--AATTTTTAAATAAATTCCAAGATTCATTTAAAGGAATATACATGTATACAAGCAGTCAAGAAAGAAGC--AAGAGTGCACTAA------ACTAACTTGCTATTAAAATACATTTTTAAAC-TTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCT--CAAAAGCACAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGAAGTG---CTTTAGAAGGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAACAG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40164778 325 - 81552678 ATACAGTTTCATTAGTATAATTTA--A--ATTTTT----CCAATTCCAAGATTCACTTAAAGGAATATACATGTATATCAGCAGTAAAGAAAGAAGC--AAGAGCGCACTAA------ACCGACTTGCTATTAGAAGACATTATTAAAC-TTAGTAACTAAAACTGAGCAGTACTGATTT-GGAGTGCTGGAATTTAGGTATATGGGATCT--CAAAAGCATAGA-GCTCAAAG---------GAGACCCCTGTATGCACGAGAGCTTAGGATGTG---CTTTAGAAGGCATTACCAAACCACGGGC--AAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTTAAAAGCCAGAGAAAAG i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108114437 329 - 128169293 atacaatttcattagtataattta--a--aatttt-taa-aaCTCCCAAGATTCATTTAAAGGAATAAACATGTATTCCAGCAGTAAATAAAGAAGC--AAGAGTACACCAA------ACTAACTTGCTGTTAAAATAAATTTGTAAAC-TTAGTAACTAAAGCTTTCCAGTCCTGATTT-GGAGTACTGGAATTTAGGTATATGGGATCC--CAATAGAATAAAGGCTTAAAA---------TAGACCCTTCTATGCATGAGAGCTTAGGATGTG---CTTTAGAAGTCATTGCCAAACCACTGTC-AAAAGTTACTTTAGTGTCTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAG i calJac3.chr8 I 5 C 0 s saiBol1.JH378145 731776 336 - 18371965 ATACAATTTCATTAGTATAATTTA--A--CATTTT-AAATAACTCCCAAGATTCATTTAAATCAATAAACACGTATACCAGCAGTAAAGAAAGAAGC--AAGAGTACACTAAACTAGTACTAACTTGCTATTAAAACAAATTTGTAAAC-TTAGTAACTAAAGCTTTCCAGTCCTGATTT-GGAGTACTAGAATTTAGTTATATGGGATCC--CAATAGAATAAAGGCACAAAG---------TAGACCCTTCTTTGCACGAGAGCTTAGGATGTG---CTTTAGGAGTCACTGCCAAACCACTGTC-AAAAATTACTTTAGTGTGTTAGTCTTACTAGGTTTGAAAAGCCAGAGAAAAA i saiBol1.JH378145 I 5 C 0 s cebCap1.NW_016107540v1 1391310 336 + 3566421 ATACAATTTTATTCGAATAATTTA--A--AATTTT-AAATAACTCCCAAGATTCATTTAAAGGAATAAACATGTATACCAGCAATAAAGAAAGAAGC--AAGAGTATACTAAACTAGTACTAACTTGCTATTAAAATAAATTTGTAAAC-TTAGTAACTAAAGCTTTCCAGTCCCAATTT-GGAGCACTAGAATTTAGGTAGATGGGATCC--CAATAGAATAAAGGCCCCAAA---------TAGACCCTTCTATGCACGAGAGCTTAGGATGTG---CTTTAGAAGTCATTGCCAAACCACTGTC-AAAAGTTACTTTAGTATCTTAGTCTTACTAGGTTTGAAAAACCAGAGAAAGT i cebCap1.NW_016107540v1 I 5 C 0 s aotNan1.NW_018514471v1 1893127 330 - 9267652 gtacaatttcattagTATAATTTA--A--AATTTT-AAATAACTCCCAAGATTCATTTGAAGGAATAAACTTGTATACCAGCAGTAAAGAAAGAAGC--AAGAGTACACTAA------ACTAATTTGCTATTAAAATAAATTTGTAAAT-TTAGTAACTAAAGCTTTCCAGTACTGATTT-GGAGTGCTGGAATTTAAGTATGTGGGATCC--CAATAGAATAAAGGCTCAAAA---------CAGACCCTTCTATGCACGAGAGCTTGGGATGTG---CTTTAGAAGTCATTTCCAAACCACTGTC-AAAAGTTACTTTAGTGTCTTTGTCTTACTAGGTTTGGAAAGCTAGAGAAAAG i aotNan1.NW_018514471v1 I 5 C 0 s otoGar3.GL873564 12754700 341 + 14340318 ATAAAATTTTCTCAGTATTATTTA--ATGAGTTTT-CAATAGCACCC-AGATTCATTTAAAAGAACAAATATATGTATCAGGAGGAAAGAAAGAAACAAAAGAGAACACTGA------AATAAATTGCTATTGAAAAAAAGATCAAACG-TTGAGAATTAAAACTACATAGTACTGACTTAGGAGTATTAGAATTGGGGTATATTTGGACT--TAAA---ATAAGGGCTAAAAGTAGATCAAATAGACCGATCTATGCACGGGAGTTTAGGGTACT---ACTTAGGTGACATTGTAAGACTATGGGGAAAAAATTAGGTTACGATCTTAGTCTTACTGGGTTTGAAGAGTCAGAGGAAAG i otoGar3.GL873564 I 164 C 0 s canFam3.chr18 51763745 327 - 55844845 AGACAATTTCATCAGTATAGCTCAGCA--AATTTT-AAATAAC-CCCAAGATTCATTTCAAAAAATAAATATGTATATTAGCAATAAAGAGAAATTA--AAGGATACATCAA------ACTCAATAACTATTAAAATAAATTATTAGGCATTAGTAACTGAAGCTATGAAGCATTGATTT-AAGGA---------TAAGTATATTGGATCCTGCAATCGAATAATAGCTAAAAA---------TGGACCTCTGTGTACATGTGAGTTTAGGACATAACTTTTTAGATAACATTGCCAAACAAGGGAC-AAAAGTTAGGTCTTTCTTATGGTCTTACT-GGCTTGAGGAATCAGAGGAGAG i canFam3.chr18 I 5 I 2140 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C a score=169988.000000 s hg38.chr22_KI270732v1_random 16644 52 + 41543 ACTCAAGACCACCATATAAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA s panTro5.chr2B 114762274 52 - 133216015 ACTCAAGGCCACCATATAAGAGCAAAACA---AAAGGACAGGGTGAGAACGTGAA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82705135 52 - 135337776 ACTCGAGAACACTATATAAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 131017 52 + 150013 ACTCAAGGCCACCATATAAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40165103 52 - 81552678 ACTCAAGGCCACCATATAAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108114766 52 - 128169293 ACTCAAGGCTACCCTATGAGAGCAAAACA---AAAGGACAGGGAGAGAATGTGAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732112 52 - 18371965 ACTCAAGGCTACCCTGTGAGAACAAAATA---AAAGGACAGGGAGAGAATGTGAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391646 52 + 3566421 TCTCAAGACTACCCTATGAGAACAAAACA---AAAGCACAGGGAGAGAATGTGaa i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893457 52 - 9267652 ACTCAAGGCTACCCTATGAGAACAAAATA---AGAGGACAGGGAGAGAATGTGAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755041 54 + 14340318 ACTCAAGGCCACAATACAACAGCAAAAGAATCAACAGACAGGGAGAG-ATGTGGA i otoGar3.GL873564 C 0 I 401 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C e canFam3.chr18 51764072 2140 - 55844845 I a score=18888.000000 s hg38.chr22_KI270732v1_random 16696 9 + 41543 GACACTGAA s panTro5.chr2B 114762326 9 - 133216015 GATACTCAA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82705187 9 - 135337776 GATACTGAA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 131069 9 + 150013 GACACTGAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40165155 9 - 81552678 GAAACTGAA i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108114818 9 - 128169293 GATATTTAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732164 9 - 18371965 GATACTTAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391698 9 + 3566421 ggtacttca i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893509 9 - 9267652 GATACTGAA i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12755095 401 + 14340318 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C e canFam3.chr18 51764072 2140 - 55844845 I a score=1232520.000000 s hg38.chr22_KI270732v1_random 16705 424 + 41543 acattttacataaagttgtataaaacatcctttaaagagaatgtaaagtttaggatatacatcaaaatcagcagagccactaaataaataaataggcattgtaaaatagcaagagaaaatttaaatggatttctaaaaaata-ttGACACCCATGATTTTTAAAATATG-TTTA-------------------------AGAAATCCCATATTTCACAGGGCAGCCTTTCCCAACACAAATATGTTAGGACATAA-GGTCCTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-ACAAA-TGTCTTCTACCCTTGTCTTTTGTCTGAAGGTGCAAAAAATTTTCATAAGCATGCATTTCTGAATGTCTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGATGGAAAACCAATCCAATCTTCTCACTGTTTGCATAAATTC s panTro5.chr2B 114762335 425 - 133216015 ACATTTTACATAAAGTTGTATAAAACATACTTTAAAGAAAATATAAAGTTTAGGTTATACATCAAAATCAACAGAACCACTAAATAAATAAATAGGAATTGTAAAAAAGCAAGAGAAAATTTAAATGGATTTCTAAAAAATA-TTGACAGCTATGATTTTTAAAATATG-TTTA-------------------------AGAAATCCCATATTTCACAGGGCAGCCTTTCACAACACAGACATATTAGGACATAAAGGTCCTTCTGTTTTTAATTTACTAGTGTTCGTAGGGTT-AAAAA-TGTCTTCTACCCTTGTCTTTTGTCTGATGGTGCAAAAAATTTTCATAAGCAAGTACTTCTGAATGCCTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGACGGAAAACACATCCAATCTTCTCACTGTTTACATAAATTC i panTro5.chr2B C 0 C 0 s panPan2.chr12 82705196 425 - 135337776 ACATTTTACATAAAGTTGTATAAAATATCCTTTAAAGAAAATGTAAAGTTTAGGATATACATCAAAATCAGCAGAGCAGCTAAATAAATAAATAGGCATTGTAAAATAACAAGAGAAAATTTAAATGGATTTCTAAAAAATA-TTAACACCTATGATTTTAAAAATATG-TTTA-------------------------AGAAATCCCGTATTTCACAGGGCAGCCTTTCACAACACAGATATATTAGGACATAAAGGTCCTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-ACAAA-TGTCTTCTACCCTTGTCTTTTGTCTGATGGTGCAAAAAATTTTCATAAGCATGTATTTCTGAATGCCTGATGGATTGACATATATAATAAGCTGCTAGTATTGAAATATGTGACATAAAACACATCCAATCTTCTCACTGTTTACATAAATTC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 131078 424 + 150013 ACATTTTACATAAAGTTGTATAAAACATCCTTTAAAGAAAATGTAAAGTTTAGGATATACATCAAAATCAGCAGAGCCACTAAATAAATAAATAGGCATTGTAAAATAGCAAGAGAAAATTTAAATGGATTTCTAAAAAATA-TTGACACCCATGATTTTTAAAATATG-TTTA-------------------------AGAAATCCCATATTTCACAGGGCAGCCTTTCCCAACACAAATATGTTAGGACATAAAGGTCCTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-ACAAA-TATCTTCTACCCTTGTCTTTTGTCTGAAGGTGCAAAAAATTTTCATAAGCATGTATTTCTGAATGCCGGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGATGGAAAA-ACATCCAATCTTCTCACTGTTTGCATAAATTC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40165164 426 - 81552678 acattttacataaagttatagaaaacatactttaaagaaaatgtaaagcttaggatgtacatcaaaatcggcagaaccactaaataaataaataggcattgtaaaatagcaagagaaaatttaaatggatttctaaaaaata-ttgaaaCCTATGATTTTTAAAATACGTTTTA-------------------------AGAAATCCTGGATTTCACAGGGCAGCCTTTCACAACATAGATATATTAGGACATGTAGGTCCTTCTGTTTTTAATTTACTAGTGTTTATAGGGTT-AAAAA-TATCTTCTACCCTTGTCTTTTGTCTGATGGTGCAAAAAATTTTCATAAGCATGTAATTCTGAATGCCTGATGGATTGACATATATAATATGCTGCTAGTATTAAAATATGTGACGGAAAACGCATCCAATCTTCTCACTGTTTACATAAATTC i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108114827 417 - 128169293 acattttacatgaagttgtataaaacttactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagcagaaccactaaataaataaataggcattgtaaaatagcaatagaaaatttaaatggatttctaaaaaATA-TCGACACCTATGATTTTTAATATATG-TTTA-------------------------AAAAATCCTGTATTTCATAGGGCAGCCTCCCACAACATAAATACATTAGGACATTAATGTCCTTCTGTTTTTAATTTACTAGTGTTTCTATGGTT-AAAAA-TGTCTT-----CTTGTCTCTTTTCTTGTGGTGC-AAAA--TTTCATAAGCATGTATTTCTGAAGGTCTGATAGATTGACATATATAACATGCTGCTAGTATTAAAACATGTGACTGAATACGCATCAAATCTTCCCACTATTTACATAAATTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732173 448 - 18371965 acattttatgtgatgatgcataaaacttactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagcagaaccactaaataaatgaataggcattgtaaaatagcaatagaagatttgaatagatttctaaaaaata-ttGACACCTATGatttttaatatatt-tttaacatatatttttatatttttaatataaaaatCCCATATTTCACACGGCAGCCTCCCACAACATAAAGACATCAGGACATTAATCTCCTTCTGTTTTTAATTTACTAGTGTTTATATGGTT-AAAAA-TGTCTTCTATCCTTGTCTCTTTTCTTGTGGTGCAAAAA--TTTCATAAGCATGTATTTCTGAAGGCCTGATGGATTGACATATATAACATGCTGATAGTATTAAAATATGTGACTGAATATGCATCAAATCTTCCCACTGTTTACATAAATTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1391707 424 + 3566421 acattttacatgaagaggcataaaacctactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagcagaaccactaaataaatgaataggcattgtaaaatagcaatagaagatttaaatggatttctaaaaaATA-TCGACATCTATGATTTTTAACATATG-TTTA-------------------------AAAAGTCCCGTATTTCACAGGGCGGCCTCCCACAACATAAATACATTAGGACATTAATGTCCTTCTGTTTTTAATTTACTAGTGTTTATATGGTTAAAAAA-TGTCTTCTATCCTTGTCTCTTTTCTTGTGGTGCAGAAA--TTTTATAAGCATGTATTTCTGAAGGCCTGATAGATTGTCATATATAACATACTGCTAGTGTTAAAATATGTGGCTGAATATGCATCAAATCTTCCCACTGTTTACATAAATTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893518 423 - 9267652 acattttacatggagttgtataaaactgactttaaagaaaatgtgaagtttaggatatatgtcaaaatcagcagaaccactaaataaatgaataggcattgtaaaatagcaatagaagatttaaatggatttctaaaaaATA-TCGACACCTATGATTTTTAATATATG-TTTA-------------------------AAAAATCCCGTATTTCACAGGGCAGCCTCCCACAACATAAATACATTAGGACATTAATGTCTTTCTGTTTTTAATTTACCAGTGTTTATATGGTT-AAAAA-TGTCTTCTATCCTTGTCTCTTTTCTTGTGGTGCAAAAA--TTTCATAAGCATGTATTTCTGAAGGCCTGATGGATTGACATATATAACATGCTGCTAGTATTAAAATATGTGACTGAATATGCCGCAAATCTTCCCACTGTTGACATACATTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755496 335 + 14340318 ACATCATACATGTGGTTGTATAAAATTCATTTTACAGAAACTTAATAATTAAGGATATTGATTATAATCTGTAGAAAAACT-GCTAAATAAATAGGCACTGTAAAATGACCATATCAAATTTAAATGGATTTCTTAAACAGAGTTGGGAA----------TAAAATGTC-TTTA-------------------------AAG------------------------------------------------------GTTCTTTTTCTTTTCAACTAAGT--TGTTTATATAGTT-AAAAAGTGTCTTCTATTCTTGTCTCTTTGCTTATGTTCCAGAAA-TTTTCATTGGCATGTTTTTATGAAG------------------------ACACTGCTGTTCCTGAAATGTGTGATTGAATATGTATCAGATCTCTTCGCTGTTCATTCACATTT i otoGar3.GL873564 I 401 I 136 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C e canFam3.chr18 51764072 2140 - 55844845 I a score=226542.000000 s hg38.chr22_KI270732v1_random 17129 96 + 41543 TAGGTTTCTCCTATATACCTCAAGCACTTATGGAGCCATttcttac---------------------------------------------------cttttaatattgccatggcattcacattgaacgtaagtcgaactctctca s panTro5.chr2B 114762760 96 - 133216015 TAAGTTTCTCCTATTTACCTCAAGCTCGTAtggagcgaattcttac---------------------------------------------------ctttcaatattgccatggcattcacattgaacgtaagttgaactctctca i panTro5.chr2B C 0 C 0 s panPan2.chr12 82705621 95 - 135337776 TAGGTTTCTCCTATTTACCTCAAGCACGTAtggagcgaattcttac---------------------------------------------------cttttaatattgccatggcattcacattgaacataagttgaactctctc- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 131502 96 + 150013 TAGGTTTCTCCTATTTACCTCAAGCACGTAtggagccaattcttac---------------------------------------------------cttttaatattgccatggcattcacattgaacgtaagtcgaactctctca i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40165590 96 - 81552678 TAGGTTTCTCCTATTTACCTCAAGCACGTAAGGagcgaattcttac---------------------------------------------------attttaatattgccatggcattcacattgaatgtaagttgaactctctca i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108115244 139 - 128169293 TAGGTTTCTCCTATTTACCTTGAGCACATATGGAGTGAATTCTTAA--------CTTTTTTTCTTTTTTTGAGCCGGAGTGCGGGCCAaattcttacatttttatgttaccgtggcattcacattgaatgtaagttgaactctctta i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732621 141 - 18371965 TAGGTTTCTCCTATTTACCTTGAGCATATATGGAGTGAATCCTTAC-----TTTTTTTTTTTTTTTTTTTGAGCTGGAGTGCAGGTCgaattcttacatttttatgttgccgtagcattgacgttgaat-taagtcgaactctctta i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392131 144 + 3566421 TA--TTTCTCCTATTTACCTTGAGCACATATGGAGTGAATTCTTGCttttttttttttttctttttttttGAGCCAGAGTGCAGGCCgaattcttacatttttatgttgctgtaccattcacgttgaat-taagttgaactctctta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1893941 138 - 9267652 TAGGTTTCTCCTATTTACCTTGAGCACATATGGAGTGAATTCTTAC--------TTTTTTTTTTTTTTTTGAGTCGGAGTGCGGGCCgaattcttacatttttctgttgccgtagcatacacgttgaat-taagttgaactctctta i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12755831 136 + 14340318 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C e canFam3.chr18 51764072 2140 - 55844845 I a score=916198.000000 s hg38.chr22_KI270732v1_random 17225 343 + 41543 tatggtagctgggttcagattccgt--tgacaatttccagttctaac----------------cctcacagtttctcagtatggctggcccagaaattcaccctacacagttgcctcctcctgatgaatgcccactacagaaccgttggatacaacctacctgactcaccccacagacctcacagcccacatggacagcccccacacgccagagtgac--ctgcttagttgcagcggga-gccaagaaatgtgcctgctgacactcaccccaccgactaga---ccccgtggaaaacttatttgggtaatgctctgggcct-aataaaggctggagtcccacagaccccttttctctctcctgctccc s panTro5.chr2B 114762856 344 - 133216015 tatggtagctgggttcagattccct--tgacgatttccagttctaac----------------cctcacagttcctcagtgtggctggcccagatattgaccctacacagctgcctcctcctggtgactagccgttgtggaaccgttggatacaacctacctgactcaccccacagacctcacagcccacatgggcagcccccacacgccagagtgac--ctgctcagttgcagctgca-gccaagaaatgtgcctgttggcactcatcccactgaccagag--ccccatggaaaacttatttgggtaatgttctgggctc-aataaaggctggagtcccacagaccacttttttctctcttgctccc i panTro5.chr2B C 0 C 0 s panPan2.chr12 82705716 341 - 135337776 ---ggtagctgggtttggattccct--tgacaatttccagttctaac----------------cctcacagttcctcagtgtggctggcccagatattgaccctacacagttgcctcctcctggtgactaccagctatggaaccgttagatacaacctacctgactcaccccacagacctcacagtgcacatggacagcccccacacaccagagtgac--ctcctcgattgcagcagga-gtcaagaaatgtgcctgctggcactcaccccaccaactagtg--ccccatggaagacttaattggataatgttctgggccc-aataaaggctggaatcccacagaccccttttctctctcctgctccc i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 131598 342 + 150013 tatggtagctgggttcagattccct--tgacaatttccagttctaac----------------cctcacagtttctcagtatggctgg-ccagaaattcaccctacacagttgcctcctcctggtgaatacccgctacagaaccgctggatacaacctacctgactcaccccacagacctcacagcgcacatggacagcccccacacgccacagtgac--ctgctcagttgcagcggga-gccaagaaatgtgcctgctggcactcaccccaccgactagag--ccccgtggaaaacttatttgggtaatgttctgagccc--ataaaggctggagtcccacagaccccttttctctctcctgctccc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40165686 344 - 81552678 tatggtaactgggttgagattccct--cgacaatttccagttgtaac----------------cctcacagttcgtcagtgtggcttgccccaatattgaccctacacaattgcctcctcctggtgactccctgctatggaaccgttggatacaacctacctgactcaacccacagacctcacagcccacatggacagccctcacacgccagagtgac--ctgctcagttgcagcagga-gccaagaaatgtgcctgctggaactcagcccaccggctagag--ccccgtggaaaacttatttgggtaatgttctgggccc-agtaaaggctggagtcccacagaccccttttctctctcttgctccc i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108115383 342 - 128169293 tatggtagttgagttcagtttccct--tgacagtttccagttctaaccct-------------cctcccagttcctcag------tggcccagataccgaccctgaacagttgcttcctcctggtgactagctgctatggaatgactggttataacctacctaactcaccctgcagacctcacaacccacacggacagtccacccatgccagactgac--ctgctcagttacagcgggaccccagggaatgtgcctgccggcactcacctcaccaactaaag--ccctgtgagaaacttgtatggctaatgttccgagtcc-agtaaagactggagtcccacagaccccttctgtctctcttgctccc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 732762 341 - 18371965 catggtagttgggttcagtttccct--tgacagtttccagttctaaccct-------------cctcccagttcctcag------tggcccagatattgaccctaaacagttgccttctcccggtgactcgctgctacggaatgactggatataacctacctaactcaccctatggacctcacagcccgcatggacagtccacccatgccagagtgac--ctgctcagttacagcaggaccccagggaatgtgcctgctggcactcaaccc-ccaactagag--ccctgtgagaaacttgtttggctaatgttccgagtcc-agtaaagactagagtcccacagacctcttctgtctctcttgctccc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392275 342 + 3566421 tgtggtagctgggttccgtgtcctt--ggacagcatccggttctaatcct-------------cctcccagttcctcag------tggcccagatattgaccctaaacagttgccttctcctggtgactagctgctatggaaagactggatatcacctacctaactcaccctacagacctcacagcctacatggacagtccacccatgccagagtgac--ctgctcagttacagtgggaccccagggaatgtgcctactggcactcaccccaccaactagag--ccccgtgagaaacttgtttggctaatgttccgagtcc-cgtaaagactggagtcccacagaccccttctgtctctcttgctccc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894079 342 - 9267652 tatggtagttgggttcagtttccct--tgacagagtccagttctaaccct-------------cctcccagttcctcag------tggcccagatattgaccccaaacagttgccacctcctggtgactagctcctatggaatgactggatataatctatctaactcacccgacagacctcacagcccacatggacagtccactcatgccagagtgac--ctgctcagttacagtgggaccccagggaatgtgcctgctggcactcaccccatcaactagag--ccccgtgagaaacttgtttggctaatgttccgagtcc-agtaaagactggagtcccacagaccccttctgtctctcttgctccc i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12755967 349 + 14340318 TGTGGGAGCTGATGTCCACTCCCATAGTGGCCACCTCCTG--GTGACCCTCCCTATGGtccagctcccccatttctcagtgtgt-gggacctgatgtccactcc-catggtagctgcctcctggtgaccctcc-ctgtggcctagctggatatgacctactggactttccc--------------cccacaagggctgggcacatgagtcacagagaccacctctcagtcacagaatgactctggagctcacgcctgcctacaccaagcccacctgttacaagtccccatggaaaatctgcttacagaatgtcttgggccctggtcacagctttagtcccactgattctctctctctctcatcccccc i otoGar3.GL873564 I 136 I 1514 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C e canFam3.chr18 51764072 2140 - 55844845 I a score=1141871.000000 s hg38.chr22_KI270732v1_random 17568 433 + 41543 cactcATCTTCCCCATTTTGTTCAGCCCTATGAGGTGTGCTACtgtattagtccattttcacaccgctggtaaagacatgcccaagagtgggtaatttccagaagaaagaagtttaatagacacacagttctacatggctgggtaggcctcacaatcatggcgcaaggtgaaaggcacgtctcacatggcagcagacaagacaagagagcttgtgcagggaaactcccctttataaaaccatcagatcttgtgagacttattcactatcagaagaacagcatgggaaagacctgcccccatgattcaattacctcacacctgttccctcccacaacatgtgggaattcaagatgagatttggctggggacacagctaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaacctacttc s panTro5.chr2B 114763200 433 - 133216015 cactcATCTTCCTCATTTTGTTCAGCCCTATGAGGTGTGCTACtgtattagtccattttcacactgccggtaaagacatgcccaagactgggtaatttccagaagaaagaggtttaatagatgcacagttccacatggctgggtaggcctcacaatcatggtggaaggtgaaaggcacgtctcacgtggcagcagacaagacaagagagcttgtgcagggaaactcccctttataaaaccatcagatcttgtgagacttattcactatcagaagaacagcatgggaaagacctgtccccatgattcaatttcctcccacctgttccctcccacaacatgtgggaactcaagatgagatttggctggggacacagctaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaaactacttc i panTro5.chr2B C 0 C 0 s panPan2.chr12 82706057 432 - 135337776 cactcATCTTCCCCAATTTGTTCAGCCCTATGAGGTGTGCTACtgtattagtccattttcacaccgccggtaaagacatgcccaagactgggtaattgccagaagaaagagatttaatagacgcacagttccacatggctgggtaggcctcacaatcatggcacaagccgaaaggcacgtctcacctggcagcagacaagacaagagagcttgtgca-ggaaactcgcctttataaaaccatcagatcttgtgagacttattcactatcagaagaacagcatgggaaagacctgcccccatgattcaattacctcccacctgttccctcccacaacatatgggaattcaagatgagatttggctggggacacagctaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaacctacttc i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 131940 432 + 150013 cactcCTCTTCCCCATTTTGTTCAGCCCTATGAGGTGTGCTACtgtattagtccattttcacaccgccggtaaagacatgcccaagactgggtaatttccagaagaaagaagtttaatagacgcacagttctacatggctgggtaggcctcacaatcatggcacaaggtgaaaggcacgtctcacatggcagcagacaagacaagagagcttgtgcagggaaactcccctttatgaaacaa-cagatcttgtgagacttattcactatcagaagaacagcatgggaaagacctgcccccttgattcaattacctcccacctgttcccttccacaacatgtgggaattcaagatgagatttggctggggacacagctaaaccCTCTTCTCAgctaccctcttctctctggatctgtgagtaataaacctacttc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40166030 432 - 81552678 cactcATCTTCCCCATTGTGTTCAGCCCTATGAGGTGTGCTATtgtattagtcgattttcacaccatcggtaaagacatgcccaagactgggtaatttccagaagaaagaggtttaatagacacacagatccacgtggctgggtaggcctcacaatcatggcagaagctgaaaggcacgtctcacatggcagcagacaaaacaagagagcttgtgcagggaaactcccctttataaaaccatcagatcttgtgagacttattcactatcagaagaatagcatgggaaagacct-cccccgtgactcaattacctcccacctgttccctcccacaacatgtgggaattcaagatgagatttggctggggacatagctaaaccGTCTTCTCAgctaccctcttctctctggatctgtgagtaataaaactacttc i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108115725 429 - 128169293 cactcatcttcctcattttgttcagccctatgaggtatgttactgtattagtccgttttcacactgcccataaagacatgcccaagaatgaggaatttacagaagaaacaggtttaacagactcaca-ttccacatggctggggaggcctcacaatcatggtggaaggtgaaaggcacattccacctggcagcagacaagagaagagagcttgtgcagagaacctcccctttataaaagcatcagatcttcggagacttattcaatatcacaataacaggatgggaaagacttgcctccatgattcagttacttcccaccctgtccctcccaaaatatgtgggaattcaagatgagatttggctggggacacagccaaacca---tatcaactaccctcttctctctggatctgtgagtaataaaactgtttc i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733103 429 - 18371965 cactcatcttcctcattttgttcagccctatgaggtgtgttactgtattagtccgttttcacactgcccataaagacgtgcccaagactgaggaatttacagaagaaagaggtttaacagacttaga-ttccacatggctggggaggcctcagaatcatggcagaaggtgaaaggcatgtctcacgtggcagcagacaagagaagagagcttgtgcagggcaactcccctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgagaaagacctgcccccatgattcagttacttccaaccctgtccctcccaaaatatatgggaattcaagatgagatttggctggggacacagccaaacca---tatcacctaccctcttctctccggatctgtgagtaataaaactgtttc i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392617 356 + 3566421 tcctcatcTTCCTCATTTTGTTCAGCCCTATGAGGCGTGTTACtgtattagtccgttttcacgctgcccataaagacatgcccaagactgaggagttgacagaagaaagaggtttaacagacttaca-ttccacatggctggggaggcctcacaatcacggtggatggtgaaaggcatgtctcacgtggcagcagacaagagaagagagcttgtgcagggaaactctcctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgggaaagacctgcctccatgattcagttacttcccaccctgaccctcccaaaatacatggg----------------------------------------------------------------------------aataaaactgtttc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894421 429 - 9267652 cactcatcttcctcattttgttcagccctatgaggtgtgttactgtattagtccgttttcacgctgcccataaagacatgcccaagactgaggaatttacagaagaaagaggtttaacagacttaca-ttccacatggctggggagaccgcgcaatcatgggggaaggtgaaaggcacgtctcacgtggcaacagacaagagaagagacattgtgcagggaaactcccctttataaaagcatcagatcttgggagacttattcaatatcacaagaacaggatgggaaagacctgcccccatgattcagttacttcccaccatgtcccttccaaaatatgtgggaattcaagatgagatttggctggggacacagccaaacca---tatcaactaccctcttctctctggatctgtgagtaataaaactgtttc i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12756316 1514 + 14340318 I e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C e canFam3.chr18 51764072 2140 - 55844845 I a score=1020964.000000 s hg38.chr22_KI270732v1_random 18001 360 + 41543 tatgatttcccatgtttggtcctgtggcctccatgtgtctgagctgagctacactggaacctaactctcctcctggccagggtctctgagagtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagtcccca-ggcatttcctagtctcaacagatgttctgtgagagggaggcctggtcgtggga---tgcacacctggcca-ctgctggggtaaggaagtgtcctgtgaaaggca----catgttaagcatccacaaccccctgcccagaaccccagaaaggcag---ggct-ccaattgacagtcactctccagagacaaacctcaagccctaactggaggaaaagaaaac-aACGTAAAAAG s panTro5.chr2B 114763633 360 - 133216015 tgtgatttcccatgtttggtcctgtggcctccatgtgtctgagctgacctacactggaacctaactctcctcctggccagggtctctgagagtgg--ctcttgtcagaaatgcacaggacacaggtcacgcaacagccacca-ggcatctcctagtctcaacagattttctgtgagagggaggcctggtcgtcgga---tgcacacctggcca-ctgctgaggtaaggaagtgtcctgtgaaaggca----catgttaagcatccacaaccccctgcccagaaccccagaaaggcag---ggct-ccaattgacagtctctctccagagacaaacctcaagccctaactggaggaaaataaaac-aATGTAAAAAA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82706489 360 - 135337776 tgtgatttcccatgtttggttctgtggcctccatgtgtctgagctgacctacactggaacctaactctcctcctggccagggtctctgagagtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagttacca-ggcatctcctagtctcaacagatgttctgtgagagggaggcctggtcgtggga---tgcacacctggcca-ctgctggggtaaggaagtgtcctgtgaaaggca----catgttaagcatccacaaccccctgaccagaaccccagaaagacag---ggct-ccaattaacagtcactctccagagacaaacctcaagccctaactggaggaaaagaaaac-CATGTAAAAAG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 132372 360 + 150013 tgtgatttcccatgtttggtcctgtggcctccatgtgtctgagctgagctacactggaacctaactctcctcctggccagggtctctgagagtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagtcacca-ggcatctcctagtctcaacagatgttctgtgagagggaggcctggtcgtggga---tgcacacctggcca-ctgctggggtaaggaagtgtcctgtgaaaggca----catgttaagcatccacaaccccctgcccagaacccaagaaaggcag---ggct-ccaattgacagtcactctccagagacaaacctcaagccctaactggaggaaaagaaaac-aATGTAAAAAG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40166462 360 - 81552678 tgtgacttcccatgtttcatcctgtggcctccatgtgtctgatctgacctatactggaacctaactctcctcctggccagggtctctgagagtgg--ctcttgtcagaaatacacaggacacaggtcaggcaacagccacca-ggcttctcctagtctcagcagatgttctgtgagagggaggcctggtcgtggga---tgcacacctggcca-ctgcaggagtaaggaaatctcctgtgaaaggca----catgttaagcatccacaaccccctgcccagaaccccagaaaggcaa---ggct-ccaattgacagccactctccagagacaaacctcaagccctaactggaggaaaataaaac-aATGTAAAAAT i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108116154 347 - 128169293 tgtgatttcccatgtttggtcctgtggcctccatgtgtctgatatgacctgcactggaacctaactctcctcctggccagggtctctgagagtggctctcttgtcagaaatacactggatacaggtcagacaatggcatcca-ggcacctgctagtttcaatggatatt---------------ctggttgtggga---tgcagacatggacc-ctgccggggtgaggaagtgtcctgtgaaaggca----tatgctaagcatccacaaccacctgcccagaaccccagaaaggaag---ggct-tgaatttacagccactctccagacacaaacctcaagccctaattagaggaaaataaaac-aGTGTAAAAAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733532 347 - 18371965 tgtgatttcccatgtttggtcctgtggcctccatatatctgatacaacctgcactggaaccttactctcctcctggccagggtctctgagagtggctctcttgtcagaaatacactggatactgattagacaatggtctcca-ggcaactgctagtctcaacggatatt---------------ctgattgtggga---tgcacacctagctt-ctgtcagggtgaggaagtgtcctgtgaaaggca----catgctaagcatccacaaccacctgccaagaaccccagaaaggcag---gact-tgaatttacagccactctccagacacaaacctcaagccctaattagaggaaaataaaac-CAGGTAAAAAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1392973 347 + 3566421 tgtggtttcccatgtttggtcctgtggcctccatgtgcctgatacagacttcaccggaacctaactctcctcctggccagggtctctgagagtggctctcttgtcagaaatacaccggatacaggtcggacaacagcctcca-ggcacctgctggtctcaacggatagt---------------ctagttgtggga---tgcacacctggacc-ctgtcgggatgaggaagtgtcctgcgaaaggca----catgctaagtatccacaagcacctgcccagaaccccagaaaggcag---ggct-tgagtttagagccactctccagacaccaacctcaagccctaattagaggaaaataaaac-TAGGTAAAAAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1894850 351 - 9267652 tgtgatttcccatgtttggtcctgtggcctccatgtgtctgatacaacctgcactggaacctaactctcctcctggccagggtctctgagagtggctctcttgtcagaaatatactggatacaggtcagacaatggcctcca-ggcacttgctagtctcaacggatatt---------------ctggctgtggga---tgcacacctggccc-ctgtcggggtgaggaagtgtcctgtgaaaggcacatgcatgctaagcatccacaaccacctgcccagaaccccagaaaggcgg---ggct-tgaaattatagccactctccagacacaaacctcaagcgctaattagaggaaaataaaac-TAGGTAAAAAT i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12757830 351 + 14340318 tgtgctttcttgtgcttcctgctttgg----gacttgtctgaccaa---tacacaagaacccaactctcctcccagtcagggtctcctagtgaggggtgtctggaaagaataccctgggcatgagtcagacaagaatgacaagggcacctgtcagcataaacaagtttcctgtgaca-ggacacctggtcgtgggggttctctgaagtagctacctgccaggatgaggaagcacccc-cggaaggtt----cactgtggacactc------------caagagccccatcaaagcaggctggctggcacttaacaaccattttcgagagagagacagcgagacctgattagagggaaataaaacTCATGAATCTTT i otoGar3.GL873564 I 1514 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C e canFam3.chr18 51764072 2140 - 55844845 I a score=1240711.000000 s hg38.chr22_KI270732v1_random 18361 409 + 41543 TTGAATTTATCTTACTATTTCAATGATCCAGTAAAGACATTCTATGCCTGTACACCACATATTTTCTTCGATTGTGGATATATTTTAGATAGAATTTTATGTCTGGCTTTCACTTTAGCCTGGTCCTTACCTCAAGCATAAGGTAAAGATTTTCCCATGGGTTCTTTTCTGGTACTACTACCTGCCAGTGTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAACCCCC-------------CTATTCATTATT-GTCAGAGTGAGACTGTTAAGTCTTGATTTCCCTGGACAACTTCACTGCATGA--CTTTTAATATGATTTTTTAATATACCCTTTACTGGACAATAAATTATATAGTTATCCGAGTAAGAGATATAGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTCTTTGGTGAACTTG s panTro5.chr2B 114763993 408 - 133216015 TTGAATTTATCTTACTATTTCAATGATCCAGGAAAGACATTCTATGCCTGTACAACACATATTTTCTTCAATTTTGGATATATTTTAGATTGAATTTTATGTCTGGCTTTCACTTTAGCCTGGTCCCTACCTCAAGCATAAGGTAAAGATTTTCC-ATGGGTTCTTTTCTGGTACTACTACCTGCCAGTGTGGAGTCATGTCCTAGTCTTTCT---------------------------TGAGGGAACCCTC-------------CCATTCATTACT-GTCAGAGTGAGACTCTTAAGTCTTGATTTCCCTGGACAACTTCATTGCATGA--CTTTTAATATGATTTTTAAATATACCCTTTACTGGACAATAAATTATATAGTTATCTGAGTAAGAGATATGGTCAGAAAGAGGCATTGCCTCATTCAGCTTTTCTGTTTGGTGAACTCG i panTro5.chr2B C 0 C 0 s panPan2.chr12 82706849 408 - 135337776 TTGAATTTATCTTACTATTTCAATGATCCAGTAAAGACATTCTATGCCTGTACACCACATATTTTCTTCGATTGTGGATTTATTTTAGATAGAATTTTAGGTCTGGCTTTCACTTTAGCCTGGTCCCTACCTCAAGCATAAGGTAAAGATTTTCC-ATGTGTTCTTTTCTGGTACTACTACCTGCCAGTGTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAATCCCC-------------CTGTTCATTATT-GTCAGAGTGAGACTGTTAATTCTTGATTTCCCTGGGCAACTTCACTGCATGA--CTTTTAATATGACTTTTTAATATACCCTTTACTGGACAATAAATTATATAGTTATCTGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTCTTTGGTGAACTTG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 132732 407 + 150013 TTGAATTTATCTTACTATTTCAATGATCTAGTAAAGACATTCTATGCCTGTACACCACATATTTTCTTCGATTGTGGATATATTTTAGATCGAATTTTATGTCAGGCTTTCACTTTAGCCTGGTCCCTACCTCAAGCATAAGGTAAAGATTTTCC-ATGGGTTCTTTTCTGGTACTACTACCTGCCAGTGTGCGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAA-CCCC-------------CTATTCATTATT-GTCAGAGTGAGACTGTTAAGTCTTGATTTCCCTGGACAACTTCACTGCATGA--CTTTTAATATGATTTTTTAATATACCCTTTACTGGACAATAAATTATATAGTTATCTGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTCTTTGGTGAACTCG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40166822 408 - 81552678 TTGAATTTATCTTACTATTTCAACGATCCAGTAAAGACATTCTGTGCCTGTACACCACATATCTTCATCAATTGTTGATATATTTTAGATCGAATTTTATGTCTGGCTTTCACTTTAGCCTGGTCCCTACCTCAAGCATAAGGTAAAGATTTTCC-ATGGGTTCTTTTCTGGTACTACTAACTGCCAGTGTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAACCCTG-------------CTATTCATTATT-GTCAGAGTGAGACTGTTAAGTCGTGATTTCCCTGGACAACTTCATTGCATGA--CTTTTAATATGATTTTTAAATATACGCTTTACTGGGCAATAAATTATATAGTTATCTGAGTAAGAGATATGGTCAGGAAGAGGCATTGCCTCATTCAGCTTTTCTGTTTGGTGAACTCG i nomLeu3.chr19 C 0 C 0 s calJac3.chr8 108116501 411 - 128169293 CTGAATTTATCATACTATTTCATTGATCTATTAGAGATATTCCACACCTGTAAACCACATATTTTCTTCGATTGTTAATATAGTTTAGATAGAATTTCATATCT-GCTTTCACTTTGGTCTGGTCTCTACCTCAACTATATAGTAAAGACTTCTG-GTGGGTTCTTTTCTTGTACTACTGCCTACCAGTGTGGGGTCATGTCCTCATCTGTCTTGGACTAGGGACACCTAGTCCAATGAATGAGGGAACACCC-------------CTGTTCATTATTGGGCAGAGTGAGA------------------------CAACTTCATTGCATGA--CTTCTAATATGATTTTTAAATATACCCTTTACTGGACAATAAATTATATGGTTACCTGAGTAAGAGATATGTCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTATCTGGTGAACTCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 733879 370 - 18371965 TTGAATTTATCGTACAATTTCATCAATCTAT--------------GCCTGTACACCACATATTTTCTTCGACTGTTAATATATTTTGGATAGAATTTCATGTCT-GCTTTTACTTTGATCTGGTCTCTACCTCGACTATATAGTAAAGACTTCCG-GTGGGTTCTTTTCTGGTACTACTATCTACCAGTTTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAATCCCC-------------CTGTTCATTAATGGGCAGAGCGAGA------------------------CAACTTCATTGCATGA--CTTCTAATATGATTTTTAAATATACCCTCTACTGGACATTAAATTATGTGGTTACCTGAGTAAGAGATACATCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTGTCTGGTGAACTCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393320 381 + 3566421 TCAAATTTATCATACTATTTCATTGATCTGTTAGAGACATTCTATGCCTGTACACCACACATTTTCTTCGATTGTTAATATATTTTAGATAGAATTTCGTGTCT-GCTTTCACTTTGATCTGGTCTCTACCTCAACTATATAGTAAAGACTTATG-GTGGGTTCTTTTCTGGTACTACTATCTACCAGTGTGGGGTCATGTCCTAGCCTATCT---------------------------TGAGGGAACTCCC-------------CTGTTCATTATTGGGCAGAGTGAG---------------------------ATTTCATTGCATGA--CTTCTAATATGATTTTTAAATATACCCTTTACTGGACAATAAATTATATGGTTACCTGAGTAAGAGATATGTCCAGCAAGAGGCATTGCCTCATAGAGCTTTTCTATCTGGTGAACTCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895201 384 - 9267652 TTGAATTTATCATACTATTTCATTGATCTATTAGGGACATTCCATACATGTACAGCACATATTTTCTTCGGTTGTTAATATATTTTAGATAGAATTTCATGTCT-GCTTTCACTTTGGTCTGGTCTCTACTTCGACTATATAGTAAAGACTTCTG-GTGGGTTCTTTTCTGGTGCTACTATCTACGAGTGTGGGGTCATGTCCTAGTCTATCT---------------------------TGAGGGAACCCCC-------------CTGTTCATTATTGGGCAGAGTGAGA------------------------CAACTTCATTGCATGA--CTTCTAATATGATTTTTAAATATACCCTTTACTGGACAATAAATTGTATGGTTACCTTAGTAAGAGATATGTCCAGCAAGAGGCATTTCCTCATAGAGCTTTTCTATCTGGTGAACTCA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12758181 401 + 14340318 TTAAACTGATCA-ACCGCTTTGCCAGTCCAACAGCAGCATTCTATTTCT-----CTGCACATTTTCTTCAATTGTTGATGTATTTTGGTTAAAATTCCATGCCTGGTTTTCTC-TTGGCCTGGTCTCTACCTCCAGTGCACAACACAG-CTTCCT-GTGGGTTATTTTCTGGTA------------GGTTTGCGGTCATGTCCTGATCTGTCC---------------------------TCAGGGAACCCTC-TGCTGGGGAACACTGTTCATTATG-GGTAGACGGAGACTGCCAAGTCTTGATTTCCCAGGACAACCTCACTGTATGAGTATTTCAATACAATTTTCAAATGTGTCCCAGATGGGAAAATAAATTATGTGGCTATCTGAGTAAGAGATACGGTCAGGAAGAAGCAGGGCCTCGTACAG-TTTTCTGTTGGATGAACTCA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766212 394 - 55844845 TTGGATTTACCTTACAGTTCCATTGATCCAGTAGTGACATTTTTTCCCTTTACACTATGAAT-TTCTCTGATTGTTGATACGTCTTACGTAGAATCT--------GGTTTCTGTGTGGCCCAGTCTCTACCTCACAGCTGCAGTGTGGCTTTCCC----TGTTATGTTCTGA-ACCACTGCCTGCAGGTCTGTGGGCACATCCTGACCCATCT---------------------------GTAGGGAAGTCTGATGGTGGAGAAA-CTGTTCATTATG-GGCAGAGTGAAA--TCCAAATCTTCATTTCCTAGGATAGCTTCACTGTAGAA-----------TAATTTTTAAGTATGCTCCATTTTGTATGATAAGTTTTGTGGCTATCTGAGCTAGAAATCCAGGCAGGAGGAAAC-TTACCTCATACCAACTTTCTATCCAGTGAGTCA- i canFam3.chr18 I 2140 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C e macFas5.chr3 67302564 0 + 192294377 C a score=33882.000000 s hg38.chr22_KI270732v1_random 18770 14 + 41543 CATATG-TTCTCCTC s panTro5.chr2B 114764401 14 - 133216015 CATATG-TTCTCCTC i panTro5.chr2B C 0 C 0 s panPan2.chr12 82707257 14 - 135337776 CTTATG-TTCTCCTC i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 133139 14 + 150013 CATATG-TTCTCCTC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40167230 14 - 81552678 CATATG-TTCTCCTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67302564 14 + 192294377 catatGATTCTTGG- i macFas5.chr3 C 0 C 0 s calJac3.chr8 108116912 14 - 128169293 CATACA-TTCACCTC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734249 14 - 18371965 CATACA-TTCTCCCC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393701 14 + 3566421 CATACA-TTCTCCTC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895585 14 - 9267652 CATACG-TTCTCCTC i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12758582 9 + 14340318 TGTATG-TTC----- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766606 13 - 55844845 CACATG-TTTTATC- i canFam3.chr18 C 0 C 0 e colAng1.NW_012115910v1 1754634 0 + 6934359 C e manLeu1.NW_012105809v1 1171384 0 - 1799296 C e chlSab2.chr21 5710798 0 + 127223203 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I e macNem1.NW_012011522v1 2784438 0 + 3123512 C e rheMac8.chr3 133472894 0 - 185818997 C a score=44802.000000 s hg38.chr22_KI270732v1_random 18784 5 + 41543 ACCCG s panTro5.chr2B 114764415 5 - 133216015 ACCCA i panTro5.chr2B C 0 C 0 s panPan2.chr12 82707271 5 - 135337776 ACCCG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 133153 5 + 150013 ACCCG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40167244 5 - 81552678 ACCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472894 5 - 185818997 ACCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302578 5 + 192294377 ACCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784438 5 + 3123512 ACCCA i macNem1.NW_012011522v1 C 0 C 0 s chlSab2.chr21 5710798 5 + 127223203 ACCCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171384 5 - 1799296 ACCCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754634 5 + 6934359 ACCCA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108116926 5 - 128169293 ACTCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734263 5 - 18371965 ACTCA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1393715 5 + 3566421 ACTCA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1895599 5 - 9267652 ACTCA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51766619 5 - 55844845 ACCTA i canFam3.chr18 C 0 C 0 e otoGar3.GL873564 12758591 0 + 14340318 C e cerAty1.NW_012000909v1 2505119 4 + 10077455 I a score=2610914.000000 s hg38.chr22_KI270732v1_random 18789 261 + 41543 CCAGTCAC-CTCTAAACCGTATTGTTCCAAGACAACAAACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTCATGCTTAATAGGGTTGCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGGTGATTTCCTTCAAT--------CTGCATCATAT-CAAGTTGAGGTT--CATGTTGATGGAAAGTAAAACATATGTTTAA-AA-TATCAGTAGTGATG s panTro5.chr2B 114764420 261 - 133216015 CCAGTCAC-CTCTAAACCGTATTGTTCCAAGACAACAAACAGAACT-CGAGTGTGTATCTTTCACCAGTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGGTGATTTCCTTCAAT--------CTGCATCATAT-CAAGTTGAGGTT--CACGTTGATGGAAAGTAAAACATATGTTTAA-AA-TATCAGTAATGATG i panTro5.chr2B C 0 C 0 s panPan2.chr12 82707276 261 - 135337776 CCAGTCAC-CTCTAAACCGTATTGTTCCAAGACAACAAACGGAACT-CGAGTGTGAATCTTTCACCACTGGATTTGTGTTTGCTCCATAGATCTTCATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCAATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGTTGATTTCCTTCAAT--------CTGCATCATAT-CAAGGTGAGGTT--CATGTTGATGAAAAGTAAAACATACATTGAA-AA-TATCAGTAATGATG i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 133158 261 + 150013 CCAGTCAC-CTCTAAACCGTATTGTTCCAAGACAACAAACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTGTTTGCTCCATAAAGCTTCATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCATAAAATATCACAGG--CCTTCTTCATATGGAATTATGGGTGATTTCCTTCTAT--------CTGCATCATAT-CAAGTTGAGGTT--CACGTTGATGGAAAGTAAAACATACGTTTAA-AA-TATCAGTAATGATG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40167249 251 - 81552678 CCAGTCAC-CTCTAAACCGTATTGTTCCAAGACAACAAACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATACGGTTTCTGTTAGCATTTTCTCTATTTATTTTCCCACAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAAT--------CTGAATCATAT-CAAGTTGAGGTT--CATGCTTAT----------ACATACGTTTAA-AA-TATCAGTAATGATG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133472899 258 - 185818997 CCAGTCAT-CTCTAAACCCTGTTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAAT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAAGTAAAACATAGTTTTTA-AA-TATCAGTAATGATG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67302583 258 + 192294377 CCAGTCAT-CTCTAAACCCTGTTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAAT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAAGTAAAACATAGTTTTTA-AA-TATCAGTAATGATG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784443 258 + 3123512 CCAGTCAT-CTCTAAACCCTGTTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTATCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAAT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAAGTAAAACATAGTTTTTA-AA-TATCAGTAATGATG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505123 258 + 10077455 CCAGTCAT-CTCTAAACCCTATTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCGTAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAAT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAACTAAAACATAGTTTTTA-AA-TATCAGTAATGATG i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5710803 258 + 127223203 CCAGTCAT-CTCTAAACCCTATTGTTCCAAGACAACATACAGAACT-TGAGTGTGTATCTTTCACCACTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAACAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAAT--------CTGCATCATAT-CAAGTTGAAATT-GCATGTTTATGGAAAGTAAAACATAGTTTTTA-AA-TATCAGTAATGATG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1171389 258 - 1799296 CCAGTCAT-CTCTAAACCCTATTGTTCCAAGACAATATACAGAACT-CGAGTGTGTATCTTTCACCACTGGATTTGTCTTCGCTCCATAAAGCTTAATGCTTAATAGGGTTTCTGTTAGCATTTTCTCTA----TTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCTTCAAT--------CTGCATCTTAT-CAAGTTGAAATT-GCATGTTTATGGAAACTAAAACATAGTTTTAA-AA-TATCAGTAATGATG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1754639 262 + 6934359 CCAGTCAC-CTCTAAACCCTATTGTTCCAAGACAACAAACAGAACT-CGAGTGTGTTTCTTTCACCCCTGGATTTGTCTTTGCTCCATAAAGCTTAATGCTTAATAAGGTTTCTGTTAGCATTTTCTCTATTTCTTTTCACATAAAATATCAGAGG--CCTTCTTAATATGGAATTATGGGCGATTTCCTTCAAT--------CTGCATCATAT-CAAGTTGAAACT-GCATGTTTATGGAAAGTAAAACATACTTTTTA-AA-TATCAGTAATGATG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108116931 256 - 128169293 CTCGCCAC-CTCTAAACCCTATTGTTCCAAGACAACAAACAGAAAT--GAGTGTTTATCTTTCACC--TGAATTTGTCTTTGCTCCATAAAGCTTAAGGCTTAATAGGTTTTCTGTTAGCATTTTC----TCTGTTTTCCCATAAAATAGCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCCTCAAT--------CTGCATCATATGAAAGTTGAAACT-GCATGCGTATGGAAAGTAAAACATACATTTTA-AA-TATAAGGAATTATG i calJac3.chr8 C 0 I 1 s saiBol1.JH378145 734268 260 - 18371965 CTTGCCAC-CACTAAACCCTATTGTTCCAAGACAACAAACAGAAAT--GAGTGTTTATCTTTCACC--CGGATTTGTCTTTGCTCCATAAAGCTTAAGGCTTAATAGGGTTTCTGTTAGCATTTTCTCTATCTGTTTTCCCATAAAACATCACAGG--CCTTCTTAATATGGAATTATCGGTGAGTTCCCTCAAT--------CTGCATCATATGAAAGTTGAAATT-GCATGTGTATGGAAAGTAAAACATACATTTTA-AA-CATCAGGAATGATG i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1393720 259 + 3566421 CTTGCCAC-CTCTATACCCTCTTGTTCTAAGACGACAAACAGAAAT--GAGTGTTTATCTTTCACC--TGGATTTGTCTTTGCTCCAT-AAGCTTAAAGCTAATTAGGGTTTCTGTTAGCATTTTCTCTATCTGTTTTCCCATAAAATATCACAGG--CCTTCCTAATATGGAATTATGGGTGATTTCCCTCAAC--------CTGCATCATATGAAAGTTGAAATT-GCATGTGTATGGAAAGTAAAACATACATTTTA-AA-TATCAGGAATGATG i cebCap1.NW_016107540v1 C 0 I 1 s aotNan1.NW_018514471v1 1895604 260 - 9267652 CTTGCCAC-CACTAAACCCTATTGTTCCAAGACAACAAACAGAAAT--GAGTATTTATCTTTCACC--TGGATTTGTCTTTGCTCCATAAGGCTTAAGGCTTAATAAGGTTTCTGTTAGCATTTTCTCTATCGGTTTTCCCATAAAATATCACAGG--CCTTCTTAATATGGAATTATGGGTGATTTCCCTCAAT--------CTGCATCATATGAAAGTTGAAATT-GCATGTGTATAGAAAGTAAAACATATATTTTA-AA-TATCAGGAATGATG i aotNan1.NW_018514471v1 C 0 I 38 s otoGar3.GL873564 12758591 244 + 14340318 ATAGTC-C-TTCTAAATCCTACTGTTTGGGGACCACAAACAGCACTTTGAGCGCACATGTTTCACCAGTGGTTTTGACTTTGCTTCCTTAAGCTTGATGCTTAATGGGGTTTCTGTTAGTATTTTTTCTGCTTAGTTTCCCATAGAATATCAAATATTCCTTGTGATAATGGAAT------------------AT--------C---ACCATAT-TAAGTTTAAATT-ACATGCTTACAGAATCAAAAACATAATTTTAG-AATTATTAGTAATGATG i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766624 228 - 55844845 ------ACACTCTAAACTCTACTGCTCCAAGACAACAAACAGCACT--GAGC-------------------ATTTGTCTTTGTGCCATTAAGCTTAGTGTTT-----------------TTTTTTTTCCATTTAATTTCCCAT--AATATTTCAGT--TTTTCTAAGTGTGGAATCATGGGTAATTTTCTTCAATTTCTTCACCTGCCCCATAT-CAATTTAAAACCCACATGCTTATAGAATGTGAAATATAACTTTCCTAA-TTTCAGTGATGATA i canFam3.chr18 C 0 C 0 a score=290010.000000 s hg38.chr22_KI270732v1_random 19050 33 + 41543 -TTTTCC-CCTCCTTTTTAGCACATGTTCTTGTGA- s panTro5.chr2B 114764681 33 - 133216015 -TTTTCC-CCTCCTTTTTAGCACATGTGCTTGTGA- i panTro5.chr2B C 0 I 4 s panPan2.chr12 82707537 33 - 135337776 -TTTTCC-CCTCCTTTTTAACACCTGTGCTTGTGA- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 133419 33 + 150013 -TTTTCC-CCTCCTTTTTAGCACATGTGCTTGTGA- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40167500 34 - 81552678 -TTTTCCTCCTCCCTTTTATCACATGTGCTTGTGA- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473157 33 - 185818997 -TTTTTC-CCTCCTTTTTAGCACATGTGCTTGTGA- i rheMac8.chr3 C 0 I 4 s macFas5.chr3 67302841 33 + 192294377 -TTTTTC-CCTCCTTTTCAGCACATGTGCTTGTGA- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784701 33 + 3123512 -TTTTTC-CCTCCTTTTTAGCACATGTGCTTGTGA- i macNem1.NW_012011522v1 C 0 I 4 s cerAty1.NW_012000909v1 2505381 33 + 10077455 -TTTTTC-CCTCCTTTTTAGCACATGTGCTTGTGA- i cerAty1.NW_012000909v1 C 0 I 4 s chlSab2.chr21 5711061 33 + 127223203 -TTTTTC-CCTCCTTTTTATCACATGTGCTTGTGA- i chlSab2.chr21 C 0 I 4 s manLeu1.NW_012105809v1 1171647 33 - 1799296 -TTTTTC-CCTCCTTTTTAGCACATGTGCTTGTGA- i manLeu1.NW_012105809v1 C 0 I 4 s colAng1.NW_012115910v1 1754901 33 + 6934359 -TTTTTC-CCTCCTTTTCAGCACATGTGCTTATGA- i colAng1.NW_012115910v1 C 0 I 4 s calJac3.chr8 108117188 33 - 128169293 -TTTTCC-CTTTATTTTTAGCACGTGTGCTTGTGA- i calJac3.chr8 I 1 C 0 s saiBol1.JH378145 734529 33 - 18371965 -TTTTCC-TTTTATTTTTAGCAGGTGTGCTTTTGA- i saiBol1.JH378145 I 1 C 0 s cebCap1.NW_016107540v1 1393980 33 + 3566421 -TTTTCC-TTTTATTTTTAGCATGTGTGCTTGTGA- i cebCap1.NW_016107540v1 I 1 I 4 s otoGar3.GL873564 12758835 29 + 14340318 -----TT-CCTTATTTTTAGCATATGTGCTTGTGA- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51766852 34 - 55844845 CATTTCC-CCCCACTTTTAGTATGTGTAC-GGAGAG i canFam3.chr18 C 0 C 0 e aotNan1.NW_018514471v1 1895864 38 - 9267652 I a score=-10602.000000 s hg38.chr22_KI270732v1_random 19083 8 + 41543 ----TACAAGCA s panPan2.chr12 82707570 8 - 135337776 ----TACAAGCA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 133452 8 + 150013 ----TACAAGCA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40167534 4 - 81552678 -------GAGT- i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67302874 4 + 192294377 -------GAGT- i macFas5.chr3 C 0 C 0 s calJac3.chr8 108117221 4 - 128169293 -------GAGT- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734562 4 - 18371965 -------GAGT- i saiBol1.JH378145 C 0 C 0 s otoGar3.GL873564 12758864 4 + 14340318 -------GAGT- i otoGar3.GL873564 C 0 I 17 s canFam3.chr18 51766886 8 - 55844845 TCATCACA---- i canFam3.chr18 C 0 C 0 e aotNan1.NW_018514471v1 1895864 38 - 9267652 I e cebCap1.NW_016107540v1 1394013 4 + 3566421 I e colAng1.NW_012115910v1 1754934 4 + 6934359 I e manLeu1.NW_012105809v1 1171680 4 - 1799296 I e chlSab2.chr21 5711094 4 + 127223203 I e cerAty1.NW_012000909v1 2505414 4 + 10077455 I e macNem1.NW_012011522v1 2784734 4 + 3123512 I e rheMac8.chr3 133473190 4 - 185818997 I e panTro5.chr2B 114764714 4 - 133216015 I a score=4214437.000000 s hg38.chr22_KI270732v1_random 19091 416 + 41543 --------CATTT-----------TAATACAATTCCAGTCTCATGCTTTGATC----CTAAGGTGAAAATAAC-ATTTTTAGATAAAA-TATATGAGTTTTATGAGGCCTTTGGTATATGATGTGATAGAATATCAGAAGACCATACTTTTTTC--------TAGTTTTCCATGCAATTCTATCA--GTTTCATCTTTACTCCTACCAGAG----TAATTTTCC-AAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----TAAGTGAAACCAAAAGCTAGATTATATA-ATTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCA----ATTAAACAGATAGGCATTTTACATTTTGAAGATCATATGG-AATCATTGTCAGATATATTATTATTTATGTCTGTATGGACATCACCTGTGCATATTTATGTAGAAA s panTro5.chr2B 114764718 426 - 133216015 --------CATTG-----------TAATACAATTCTAGTCTCATGCTGTGATCATTCCTAAGATGAAAATAAC-ATTTTTAGATAAAA-TATCTGAGTTGTATGAGGCCTTTATTATATGATGTGATATAATGTCAGAAGACCATACTTTTTTC--------TAGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----TAATTTTCC-AAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----TAACTGAAAGGAAAAGCTAGATTATATA-ATTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-ACCCATTGTCAGATATATTATTATTTATGTCTATATGGACATCACCTGTTCATATTTATGTAGAAA i panTro5.chr2B I 4 C 0 s panPan2.chr12 82707578 426 - 135337776 --------CATTT-----------TAATACAATTGTGGTCTCATGCTTTGATCATTCCTATGATGAAAATAAC-AATTTTAGATAAAA-TATCTGAGATTTATGAGGCCTTTAGTATGTGATGTGATAGAATATCAGAAGACCATACTTTTTTC--------TAGTTTTCTGTGCAATTCTATCATTATTTCATCTTTACTCCTGCCAGAG----TAATTTTGC-AAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----TAAGTGAAATGAAAAGCTAGATTACATA-ATTTATCTATAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCAGTCAATTACACAGATAAGCATTTTACATGTTGAAGATCATATGG-ACCCATTGTCAGAAATATTATTATTTATGTCTATATGGACATCACCTGTGCATATTTACATAAAAA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 133460 424 + 150013 --------CATTC-----------TAATACAATTCCAGTCTCATGCTTTGATCATTCCTAAGATGAAAATAAC-ATTTTTAGATAAAA-TATCTGAGTTTTATGAGGCCTTTAGTATATGATGTGATAGAATATCAGAAGACCATACTTTTTTC--------TAGTTTTCCGTGCAATTCTATCA--GTTTCATCTTTACTCCTACCAGAG----TAATTTTCC-AAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----TAAGTGAAACCAAAAGCTAGATTATATA-ATTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCAGTCAATTACACAGAAAGGCATTTTACATTTTGAAGATCATATGG-AATCATTGTCAGATATATTATTATTTATGTCTGTATGGACATCACCTGTGCATATTTATGTAGAAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40167538 424 - 81552678 --------CATTG-----------TAATACAATTCTAGTGTCATGCTTTGATCATTCCTAAGATGAAAATAACTTTTTTTAGATAAAA-TATCTGAGTTTTATGAGGCCTTTAGTATATGATGTGATAGAATATCAGAAGACCATACTTTTTTC--------TAGTTTTCCATGCAATTCTATCATTGTTTCATCATTACTCCTACCAGAG----TAATTTTCC-AAAATAGATATCTTGTCATTCTTCC---TGTTATCAGTAAA----TAAGTGAAATGAAAAGCTAGATTATTTA-ATTTATCTAGAACAAGGAAGTAGAATTGAATCTCTATTCATTAATGAGACTAACCAGTCAATTACACAGATAGGTATTTTACATTTTGAAGATCATATGG-ACCCATTGTCAGATATATTATTATTTATGTCTATATGGACATCGCCTGTTCATATTTATGTAGAAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473194 422 - 185818997 --------CATTG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAAC-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----TAATTTTCC-AAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCCAGATACATTACTATTTATACCTACATTGACCTCACCTGTGCATATTTGTGCAAAAA i rheMac8.chr3 I 4 C 0 s macFas5.chr3 67302878 422 + 192294377 --------CATTG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAAC-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----TAATTTTCC-AAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCCAGATACATTACTATTTATACCTACATTGACCTCACCTGTGCATATTTATGCAAAAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2784738 422 + 3123512 --------CATTG-----------TAACACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAAC-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----TAATTTTCC-AAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGCAGATCATATGG-ACCCGTTGCCAGATACATTACTATTAATACCTACATTGACCTCACCTGTGCATATTTATGCAAAAA i macNem1.NW_012011522v1 I 4 C 0 s cerAty1.NW_012000909v1 2505418 422 + 10077455 --------CATTG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAAC-ATTTTAAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCTTACCAGAG----TAATTTTCC-AAAATAGGTATCTTGTCATTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATACATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCCAGATACATTACTATTTATACCTACATTGACCTCACCGGTGCATATTTATGCAAAAA i cerAty1.NW_012000909v1 I 4 C 0 s chlSab2.chr21 5711098 416 + 127223203 --------CGTTG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAAC-ATTTTTAGATAAAA-TATC---------TGAAGCCTTTAGGAGATGATGTGATAGAATATCAGAAGACCATATTTTTCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTTTACTCCTACCAGAG----TAATTTTCC-AAAATAGGTATCTTGTCATTCTTCCTGTTGTTATCAGTGAA----AAAGTGAAATGAAAATCTAGATTATATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCATTAATGAGACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCCAGATACATTACTATTTACACCTACATTGACCTAACCGGTGAATATTTATGCAAAAG i chlSab2.chr21 I 4 C 0 s manLeu1.NW_012105809v1 1171684 422 - 1799296 --------CATTG-----------TAATACAATTCTAGTCTCACGCTTTGATCATTCCTAAGATGAAAATAAC-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCTTTAGGATATGATGTGATAGAATATCAGAAGATCATATTTTTCTC---------AGTTTTCCATGCAACTCTATCATTGTTTCATCTTTACTCCTACCAGAG----TAATTTTCC-AAAATAGGTATCTTGTCGTTCT---TGTTGTTATCAGTGAA----TAAGTGAAATGAAAAGCTAGATTACATA-TTTTATCTAGAACAAGAAAGTAGGATTGAATCTATATTCATTAATGAAACTAACCAGTCAATTACACAGATAGGCATTTTACATTTTGAAGATCATATGG-ATCCATTGCCAGATACATTACTATTCATACCTACATTGACCTCACCGGTGCATATTTATGCAAAAA i manLeu1.NW_012105809v1 I 4 C 0 s colAng1.NW_012115910v1 1754938 425 + 6934359 --------CATTG-----------TAATACAATTCTAGTCTCACGCTTTGATCATCCCTAAGATGAAAATAAC-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCATTTAGGATGTGATGTGATAGAATATCAGAAGACCATATTTTTCTC---------AGTTTTCCATGCAATTCTATCATTGTTTCATCTATACTCCTACCAGAG----TAATTTTCC-AAAATAGATATCTTGTCATTCTTCCTGTTATTATCAGTGAA----TAAGTGAAATGGAAAGCTAGATTATATA-TTTTATCTAGAACAAGAAAGTAGAATTGAATCTATATTCTTTAATGAGACTAACTAGTCAATTACACAGATAGACATTTTACATTTTGAAGATCATATGG-ACCCATTGCCAGATACATTACTATTTATATCTACATTGATCTCACCTGTGCATATTTATGCAAAAA i colAng1.NW_012115910v1 I 4 C 0 s calJac3.chr8 108117225 415 - 128169293 --------CATTG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTAAGATGAAA---AT-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCAATAGGATATCTTGTGATAGGCTATCATAAGACCATATTTTTCTC--------TAGTTTTGTATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAG----TAAATTTCC-AAAATAGATATCTTGTCATTCTTCCTGTTGTTATCAGTAAA----GAAGTGATATGAAAAGCTAGATTATATATTTTTATGCAGAGCAAGAAAGTAGAATTGAATCTATATTCTTTAATAAGACTAATCAGTCAATTACAC----AGTCATTTTACATTTTGAAGATTATATCG-GCCCATTGTCAGA-----TATTATGTATTTCTATATGGACATGGCCTGTGCATATTTATGTAGAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734566 421 - 18371965 --------CATTG-----------TAATACAATTTTA-TCTCTTGCTTTGATCATTCCTAAGATGAAAATTAT-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCAATAGGATGTCTTGTGATAGAGTATCATAAGACCATATTTTTCTC--------TAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAG----TAAATTTCC-AAAATAGATATCTTGTTATTCTTTCTGTTGTTATCAGTAAA----TAAGTGATATGAAAAGCTAGATTATATATTTTTATCTAGAGCAAGAAAATAGAATCGAATCTATATTCTTGAATAAGACTAACCAGTCAATTACACATATAGTTATTTTACATTTTGAAGATTATATCG-ACCCATTGTCAAA-----TATTATGTATATCTATATGGACATGGCCTGTGCATATTTATGTAGAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394017 419 + 3566421 --------CATTG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTGAGATGAAA---AT-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCAATAGGATATCTTGTGATAGAATATCATAAGACCATATTTTTCTC--------TAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAG----TAAATTTCC-AAAATAGATATCTTGTCATTCTTCCTGTTGTTATCCGTAAA----TAAGTGATATGAAAAGCTAGATTATATATTTTTATCTAGAGCAAGAAAGAAGAATTGAATCTATGTCCTTGAATAAGACTAACCAGTCAGTTACACATATAGTCATTTTACATTTTGAAGATTATGTCG-ACCCATTGTCAGA-----TATTACGTATATCTATATGGACTTGGCCTGTGCATATTTATGTAGAAA i cebCap1.NW_016107540v1 I 4 C 0 s aotNan1.NW_018514471v1 1895902 416 - 9267652 --------CATTG-----------TAATACAATTTTAGTCTCATGCTTTGATCATTCCTAAGATGAAA---AT-ATTTTTAGATAAAA-TATCTGAGCTTTATGAAGCCAATAGGATATCTTGTGATAGAATATCATAAGACCATATTTTTCTC--------TAGTTTTGCATGTAATTCTATCACTGTATCATCCTTACTCCTACCAGAG----TAAATTTCC-AAAATAGATATCTTGTCATTCTTCC---TGTTATCAGTAAA----TAAGTGATATGAAAAGCTAGATGATATATTTTTATCTAGAGCAAGAAAGTAGAATTGAATCTATATTCTTTAACAAGACTAACCAGTCAATTACACATATAGTCATTTTACATTTTGAAAATTATATCG-ACCCATTGTCAGA-----TATTATGTGTTTCTATATAGACATGGCCTGTGCCTATTTATGTAGAAA i aotNan1.NW_018514471v1 I 38 C 0 s otoGar3.GL873564 12758885 393 + 14340318 --------CACTGGGAAACAGAGATAATGTAATTCTTGTCTCATATTTTGATCTTTCCCAAGATGAAAAGAAT-ATTTTTAGTTAAAAGTACCTAAAATTAATGAAACTGTTAGGATATGATGAGATAGAGTATTATAAGACCATAATTTTCTC---------CATTTTACACATAATGCTATCATTGTTCCATTCTT-------TCAGAT----TATTTTTTCTAAAATGGATATCTTATCATTCTTTCTGTTATTATCAGTAAA----TAAGTGA-ATGAAAAACTAGATTATATGTTTTCATATGAGACAAGAAAGTAGAATCAATTGTACATCCTTTCATAA----AACAAGTCAGTTACAC----AGCCATTATACATTTTAAAGATAATATGGCATCCACTGTCAGAAAAATTATTATTG----CTGTATAGA--------------------------- i otoGar3.GL873564 I 17 C 0 s canFam3.chr18 51766894 414 - 55844845 TATTTAATCAATGAGGGAAAGATATAATATGATTCTATTCTCATAATTTGGTCTTTCCCCAAATAA-----AT-AATTTTTGTTAAAA-TATTTGAGCTTAATGAAACTTTTAAGATGAGATGTGATAGACTATTGTTTGGCCATATTCTTCACTTATTTTATAGTTTTGCCCATAATTCTATCATTGCTCCCTCCTTAACTTTTCCAAAATCTTTGTTTTTCC-AAAATCTATATTTTGCCATTTTCCCTGTCATTATTTGTAAATGAGTAAGTGAAATGAAAAAC-AGAGTGTATATCTGTATTTGGGACAAAAAGGTAGAATAAAATCTATATTATCTAATAA----ATTCAGTCAATTACATAGATAATTATTGTATATTTTAAGGA-----TAG-------TGTCAGAAAAATGGTCGCTTCTATCTATATAAA--------------------------- i canFam3.chr18 C 0 C 0 a score=711182.000000 s hg38.chr22_KI270732v1_random 19507 93 + 41543 TCAATG-GAGTTGATTTTTATTTTTATTATATATAtttttcgagatagggtcttgctttgttgcccaggctggagtgcagtggttcaatcactg s panTro5.chr2B 114765144 94 - 133216015 TCAATGAGAGCTGATTTTTATTTTTATTATATGTAttttttgagatagggtcttgctttgttgcccaggctgcagtgcagtggtgcaatcactg i panTro5.chr2B C 0 C 0 s panPan2.chr12 82708004 94 - 135337776 TCAATGAGAGCTGATTTTTATTTTTATTATATATAttttttgagatagggtcttgctttgttgcccaggctgcagtacagtggttcaatcactg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 133884 94 + 150013 TCAATGAGAGTTGATTTTTATTTTTATTATATATAttttttgagatagggtcttgctttgttgcccaggctggagtgcagtggtgcaatcactg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40167962 94 - 81552678 TCAATGAGAGGTGAtttttatttttattatatatattttttgagatagggtcttgctttgttgcccaggctggagtgcagtggtgcaatcactg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473616 94 - 185818997 TCAATGAGAGTTGATTTTTATTTTTATTGTATGTAttttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303300 94 + 192294377 TCAATGAGAGTTGATTTTTATTTTTATTGTATGTAttttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785160 94 + 3123512 TCAATGAGAGTTGATTTTTATTTTTATTGTATGTAttttttgagttagagtcttgctttggtgcccaggctggagtacagtggtgcaatcactg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505840 94 + 10077455 TCAATGAGAGCTGATTTTTATTTTTATTATATGTAttttttgagttagagtcttgctttggtgcccaggctggaatacagtggtgcaatcactc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711514 94 + 127223203 TCAGTGAGAGCTGATTTTTATTTTTATTGTATGTAttttttgagttaggttcttgctttggtgcccaggctggaatacagtggtgcaatcactg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172106 94 - 1799296 TCAATGAGAGATGAtttttatttttattatatgtattttttgagttagggtcttgctttgatgcccaggctggaatacagtggtgcaatcactc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755363 94 + 6934359 TCAATGAGAGCTGATTTTTATTTTTATTATATGTAttttttgagttagggtcttgctttggtgcccaggttggaatatcgtggtacgatcactg i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117640 69 - 128169293 TTAATGAGAGCTGATTTTTATTTCAATTATGTGTATTTCTTGGGATAGGGTCTTGCTTTATTGC-------------------------cactg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 734987 69 - 18371965 TCAATGACAGCTGATTTTTATTTTAATTTTATGCATTTTGGGAGATAGGGTCTTGCTTTATTGC-------------------------cactg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394436 69 + 3566421 TCAATGAGAGCTGATTTTTATTTTAATTATATGTATTTTTTGGGATAGGGTCTTGCTTTATTGC-------------------------CACTg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896318 69 - 9267652 TCAATGAGAGCTGATTTTTATTTTAATTATATGTATTTTTTGGGATAAGGTCTTGCTTTATTGC-------------------------CACTg i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51767308 33 - 55844845 ------------------------CATTACCTATATTCATCTATGTAGA-------------------------------------AATCAATG i canFam3.chr18 C 0 C 0 e otoGar3.GL873564 12759278 0 + 14340318 C a score=594011.000000 s hg38.chr22_KI270732v1_random 19600 64 + 41543 ctcactgcagcctcaacctcccaagctcaggcaatccttccaccttgacctcccaaatacctag s panTro5.chr2B 114765238 64 - 133216015 ctcactgcagcctcaacctcccaagctcaagcaatccttccaccttggcctcccaaatagctat i panTro5.chr2B C 0 C 0 s panPan2.chr12 82708098 64 - 135337776 ctcactacagcctcagcctcccaagctcaagctatccttccaccttggcctcacaaatagctag i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 133978 64 + 150013 ctcactgcagcctcaacctcccaagctcaagcaatccttccaccttgacctcccaaatagctgg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168056 64 - 81552678 ctcactgcagcctcaacctcccaagctcaagcaatccttccaccttggcctccgaaatagctag i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473710 64 - 185818997 ctcactgcagcctcaaccccccaagctcaagcaatccttccacctcagcctcccaaatagctag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303394 64 + 192294377 ctcactgcagcctcaaccccccaagctcaagcaatccttccacctcggcctcccaaatagctag i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785254 64 + 3123512 ctcactgcagcctcaaccccccaagctcaagcaatccttccacctcggcctcccaaatagctag i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505934 58 + 10077455 c------caagctcaacctcccaagctcaagcaatccttccaccttggcctcccaaatatctag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711608 64 + 127223203 ctcactgcagcctcaacctcccaagctcaagcaatccttccaccttagtcttccaaatagctag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172200 58 - 1799296 c------caagctcaacctcccaagctcaagcaacccttccaccttggcctcccaaatacctag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755457 64 + 6934359 ctcactgcagccacaacctccaaagctcaagcaatccttccaccttggcctcccaaatagctag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117709 64 - 128169293 ttcactgcgacctcgacctttcaagctgaagcaatccttccacctcagcctcccaagtagctag i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735056 64 - 18371965 ctcactgcagcctcaaccttccaagctgaagcaatccttccacctcagcctcccaaatagctag i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394505 64 + 3566421 ctcactgcagcctcaactttccaagctgaagcaatccttccacctcaccctcccaaatagctag i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896387 64 - 9267652 ctcgctgcagcctcaaccttccaagctgaagcaatccttccacctcagcctcccaaatagctag i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12759278 0 + 14340318 C e canFam3.chr18 51767341 0 - 55844845 C a score=23480.000000 s hg38.chr22_KI270732v1_random 19664 3 + 41543 gac s panTro5.chr2B 114765302 3 - 133216015 gac i panTro5.chr2B C 0 C 0 s panPan2.chr12 82708162 3 - 135337776 gac i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 134042 3 + 150013 gac i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168120 3 - 81552678 gac i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473774 3 - 185818997 aac i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303458 3 + 192294377 aac i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785318 3 + 3123512 aac i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2505992 3 + 10077455 gac i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711672 3 + 127223203 gac i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1172258 3 - 1799296 gac i manLeu1.NW_012105809v1 C 0 I 6435 s colAng1.NW_012115910v1 1755521 3 + 6934359 aac i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117773 3 - 128169293 tac i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735120 3 - 18371965 tac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394569 3 + 3566421 tac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896451 3 - 9267652 tac i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759278 3 + 14340318 GAC i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51767341 0 - 55844845 C a score=196477.000000 s hg38.chr22_KI270732v1_random 19667 26 + 41543 aacaggtgcacatcaccatgcccacc s panTro5.chr2B 114765305 26 - 133216015 aacaggtgcacctcaccatggccacc i panTro5.chr2B C 0 C 0 s panPan2.chr12 82708165 26 - 135337776 aacaggtgcacatcaccatgtccACt i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 134045 26 + 150013 aacaggtgcacatcaccatgcccatc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168123 26 - 81552678 aacaggtgcacatcaccatgcccacc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473777 26 - 185818997 aacaggtgcacaccatcatgcccagc i rheMac8.chr3 C 0 I 3 s macFas5.chr3 67303461 26 + 192294377 aacaggtgcacaccatcatgcccagc i macFas5.chr3 C 0 I 2 s macNem1.NW_012011522v1 2785321 26 + 3123512 aacaggtgcacaccatcatgcccagc i macNem1.NW_012011522v1 C 0 I 1 s cerAty1.NW_012000909v1 2505995 26 + 10077455 gacaggtgcacaccaccatgcccagc i cerAty1.NW_012000909v1 C 0 I 6 s chlSab2.chr21 5711675 26 + 127223203 cataggtgcacacaaccatgcctagc i chlSab2.chr21 C 0 I 11 s colAng1.NW_012115910v1 1755524 26 + 6934359 aacaggtgcacgccaccatgcccagc i colAng1.NW_012115910v1 C 0 I 6 s calJac3.chr8 108117776 26 - 128169293 aacaggtgtgcaccaccatgcccagc i calJac3.chr8 C 0 I 2 s saiBol1.JH378145 735123 26 - 18371965 tacaggtgtgcaccaccatgcccagc i saiBol1.JH378145 C 0 I 2 s cebCap1.NW_016107540v1 1394572 26 + 3566421 aacaggtgtgcagcaccctgcccagc i cebCap1.NW_016107540v1 C 0 I 7 s aotNan1.NW_018514471v1 1896454 26 - 9267652 aacaggtgtgcaccaccatgcccagt i aotNan1.NW_018514471v1 C 0 I 2 s otoGar3.GL873564 12759281 21 + 14340318 ATCATCTGTACATAGCAATGC----- i otoGar3.GL873564 C 0 C 0 e manLeu1.NW_012105809v1 1172261 6435 - 1799296 I e canFam3.chr18 51767341 0 - 55844845 C a score=37133.000000 s hg38.chr22_KI270732v1_random 19693 8 + 41543 tttttttt s panTro5.chr2B 114765331 8 - 133216015 tttttttt i panTro5.chr2B C 0 C 0 s panPan2.chr12 82708191 8 - 135337776 tttttttt i panPan2.chr12 C 0 I 997 s gorGor5.CYUI01000341v1 134071 8 + 150013 tttttttt i gorGor5.CYUI01000341v1 C 0 I 2 s nomLeu3.chr19 40168149 7 - 81552678 ttttttt- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473806 8 - 185818997 tttttttt i rheMac8.chr3 I 3 C 0 s macFas5.chr3 67303489 8 + 192294377 tttttttt i macFas5.chr3 I 2 C 0 s macNem1.NW_012011522v1 2785348 8 + 3123512 tttttttt i macNem1.NW_012011522v1 I 1 C 0 s cerAty1.NW_012000909v1 2506027 8 + 10077455 tttttttt i cerAty1.NW_012000909v1 I 6 C 0 s chlSab2.chr21 5711712 8 + 127223203 tttttttt i chlSab2.chr21 I 11 C 0 s manLeu1.NW_012105809v1 1178696 8 - 1799296 tttttttt i manLeu1.NW_012105809v1 I 6435 C 0 s colAng1.NW_012115910v1 1755556 8 + 6934359 tttttttt i colAng1.NW_012115910v1 I 6 C 0 s calJac3.chr8 108117804 4 - 128169293 tttt---- i calJac3.chr8 I 2 C 0 s saiBol1.JH378145 735151 4 - 18371965 tttt---- i saiBol1.JH378145 I 2 C 0 s cebCap1.NW_016107540v1 1394605 4 + 3566421 tttt---- i cebCap1.NW_016107540v1 I 7 C 0 s aotNan1.NW_018514471v1 1896482 4 - 9267652 tttt---- i aotNan1.NW_018514471v1 I 2 C 0 e otoGar3.GL873564 12759302 0 + 14340318 C e canFam3.chr18 51767341 0 - 55844845 C a score=168758.000000 s hg38.chr22_KI270732v1_random 19701 22 + 41543 ttt-aacttttgacagagactag s panTro5.chr2B 114765339 23 - 133216015 ttttaacttttgatgaagactgg i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 134081 23 + 150013 ttttaacttttgatagagactag i gorGor5.CYUI01000341v1 I 2 C 0 s nomLeu3.chr19 40168156 22 - 81552678 -tttaacttttggtagagactgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473814 22 - 185818997 -tttaacttttggtagagactgg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303497 22 + 192294377 -tttaacttttggtagagactgg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785356 22 + 3123512 -tttaacttttggtagagactgg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506035 22 + 10077455 -tttaacttttggtagagactgg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711720 22 + 127223203 -tttaacttttggtagagactgg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178704 22 - 1799296 -tttaacttttggtagagactgg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755564 22 + 6934359 -tttaacttttggtagagactag i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117808 22 - 128169293 -tctaacttctggtacagactgg i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735155 22 - 18371965 -tttaacttttggtacaaactgg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394609 22 + 3566421 -tttaacttttggtacagactgg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896486 22 - 9267652 -tttaacttttggtacagactgg i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759302 9 + 14340318 --------------AGAAATCAA i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51767341 0 - 55844845 C e panPan2.chr12 82708199 997 - 135337776 I a score=510317.000000 s hg38.chr22_KI270732v1_random 19723 58 + 41543 atcttgctatgttgctgaggttgctcttgaactcctgggctcaaagaatcctctcctt s panTro5.chr2B 114765362 58 - 133216015 gtcttgttatgttgcccaggttgctcttgaactcctgggctcaaagaatcctctcatt i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 134104 58 + 150013 atcttgctaagttgcccaggttgctcttgaactcctgggctcaaagaatcctctcatt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168178 58 - 81552678 gtcttgctatattgcccaggttgctcttggactcctgggctcaaagaatcctgtcatt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473836 58 - 185818997 atcttgctatactgcccaggttgcttttgaagtcctgggctcaaagaatcctctcatt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303519 58 + 192294377 atcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785378 58 + 3123512 atcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506057 58 + 10077455 atcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711742 58 + 127223203 atcttgctatactgcccaggttgctcttgaagccctgggctcaaagaatcctctcatt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178726 58 - 1799296 atcttgctatactgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755586 58 + 6934359 atcttgctatattgcccaggttgctcttgaagtcctgggctcaaagaatcctctcatt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117830 58 - 128169293 gtcttgctatgttgtccaggttgctcttgaactcctgggctcaaagaatcctcttatt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735177 58 - 18371965 gtcttgctatgttgtccaggtggctcttgaactcctgggctcaatgaatcctctcatt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394631 58 + 3566421 gtcttgctatgttgtccaggttgctcttgaactcctgggctcaaagaatcctctcatt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896508 58 - 9267652 gtcttgctatgttgtctaggttgctcttgaactcctgggctcaaagaatcctctcatt i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12759311 0 + 14340318 C e canFam3.chr18 51767341 0 - 55844845 C e panPan2.chr12 82708199 997 - 135337776 I a score=10920.000000 s hg38.chr22_KI270732v1_random 19781 1 + 41543 t s panTro5.chr2B 114765420 1 - 133216015 t i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 134162 1 + 150013 t i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168236 1 - 81552678 t i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473894 1 - 185818997 t i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303577 1 + 192294377 t i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785436 1 + 3123512 t i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506115 1 + 10077455 t i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711800 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178784 1 - 1799296 t i manLeu1.NW_012105809v1 C 0 C 0 s nasLar1.chrUn_JMHX01042493v1 68 1 - 1042 t i nasLar1.chrUn_JMHX01042493v1 N 0 N 0 s colAng1.NW_012115910v1 1755644 1 + 6934359 t i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117888 1 - 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735235 1 - 18371965 t i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394689 1 + 3566421 t i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896566 1 - 9267652 t i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12759311 0 + 14340318 C e canFam3.chr18 51767341 0 - 55844845 C e panPan2.chr12 82708199 997 - 135337776 I a score=411693.000000 s hg38.chr22_KI270732v1_random 19782 48 + 41543 cagcctcttcaactgctggtattacaagcatgagccaccATATGGGCT s panTro5.chr2B 114765421 48 - 133216015 cagcctcttcaactgctggtattacaagcatgagccaccATATGGGCT i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 134163 48 + 150013 cagcctcttcaactgctggtattacaagcatgagccaccATATGGGCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168237 48 - 81552678 cggcctcttcaactgctggtattacaagcatgagtcaccATATGGGCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473895 48 - 185818997 cagtctcttaaaatgctggtatgacaggcatgagccaccATATGGGCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303578 48 + 192294377 cagtctcttaaaatgctggtattacaggcatgagccaccATATGGGCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785437 48 + 3123512 cagtctcttaaaatgctggtattacaggcatgagtcaccATATGGGCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506116 48 + 10077455 cagtctcttaaaatgctggtattacaggcatgagccaccATATGGGCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711801 48 + 127223203 caatctcttaaaatgctggtattagaggcatgagccaccATATGGGCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178785 48 - 1799296 cagtctcttaaagtgctggtattacaggcatgagccaccATATGGGCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755645 48 + 6934359 caatctcttaaaatgctggtattacaggcatgagccaccATATGGGCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117889 48 - 128169293 cagcctcttaaaatactggtattacagacataagccaccATATGGGCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735236 48 - 18371965 caccctcttaaaatgctggtattacagacatgagccaccATATGGGCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394690 48 + 3566421 cagcctcttaaaatgctgatattacagacatgagtcaccATATGGGCT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896567 48 - 9267652 cagcctcttaaaatgctgatattacaaacatgagccaTTATATGGGCT i aotNan1.NW_018514471v1 C 0 C 0 e otoGar3.GL873564 12759311 0 + 14340318 C e canFam3.chr18 51767341 0 - 55844845 C e panPan2.chr12 82708199 997 - 135337776 I a score=12000.000000 s hg38.chr22_KI270732v1_random 19830 1 + 41543 G s panTro5.chr2B 114765469 1 - 133216015 G i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 134211 1 + 150013 G i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168285 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473943 1 - 185818997 G i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303626 1 + 192294377 G i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785485 1 + 3123512 G i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506164 1 + 10077455 G i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711849 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178833 1 - 1799296 G i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755693 1 + 6934359 G i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117937 1 - 128169293 G i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735284 1 - 18371965 G i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394738 1 + 3566421 G i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896615 1 - 9267652 G i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759311 1 + 14340318 G i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51767341 0 - 55844845 C e panPan2.chr12 82708199 997 - 135337776 I a score=7118848.000000 s hg38.chr22_KI270732v1_random 19831 713 + 41543 GAAGCTGATTTTTAAAATACTGAGACCATATAGATGACAGCACCTGAAAAATAGACAACACTAAGCTTTATGTTAAAAGGTGT--GAGGGTATCAAT-GTTGTTGTGGCTA-----------TT----GGGGAGGAAAA----CGTTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTA--AACTT----------TGGCTCTA---ATTTAACAAATGTTCTCTGGGGTGACAGTATGTATGTAACCATGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTC---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATATCAGATTAAAGACATTGCGAGGTA--TGCAATGATAATCAGCAATGGTTGTTCACACAATACATCAAATCAGTATTTGAATTAGCTTTTCAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGA---TAAATCTTATTAGGCTGAGATGTGTTTTTGCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCAGCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TGTCTAAGTGTCCACTAGTTATATACCATTTTGTAGTTTAA-GCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGATCTTGTTTTTTTTCCACTATCACTTCTTTACTGACCATATAA s panTro5.chr2B 114765470 712 - 133216015 GAAGCTGATTTTTAAAATACTGAGATCATATAGATGACAGCACGTGAAAAACAGACAACACCAAGCTTTATGTTAAAAGGTGT--GAGGGTATCAAT-ATTGTTGTGGCTA-----------AT----GGGGAGGAAAA----CATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTA--AACTT----------TGGCTTTA---ATTCAACAAATGTTCTCTGGGGCGACAGTATGTAGGTAACCACGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAATTAATCCATACTGGGTTTGACAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATATCAGATAAAAGAGAATGCCAGGTA--TGCAATGATAATCAGCAATGATTGTTCACACAATACATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAATTCTTGACTCTTTAGTAGA---TAAATCTTGTTAGGCTGAGATGTGTTTTCCCCTGTTTTTCCACAAGCAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCATCAAGCCAAAAG--CTG--AAGTTCGTCAATCAGTG--TGTCTAAGTGTTCACTAGTTATATACCATTTTGTATTTTAA-GCTATATTTCCAACTTCCTAAATCATCACCTTCATTTGACCTTG-TTTTTTTCCACTATCACTTAATTATTGACCATATAA i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 134212 711 + 150013 GAAGCTGATTTTTAAAATACTGAGACCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GAGGGTATCAAT-GTTGTTGTGGCTA-----------TT----GGGGAGGAAAA----CATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTA--AACTT----------TGGCTTTA---ATTTAACAAATGTTCTCTGGGGTGACAGTATGTATGTAACCATGC---------------------TATGCCCATTCACAGATGCAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATATCAGATTAAAGAGATTGCGAGGTA--TGCGATGATAATCAGCAATGGTTGTTCACATAATACATCAAATCAGTATTTGAATTAGATTTTCAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGA---TAAATCTTATTAGGCTGAGATGTGTTTTTGCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCAGCAAGCCAAAAG--CTG--AAGTTCATCAATCGATG--TGTCTACGTGTCCACTAGTTATATACCATTTTGTAGTTTAA-GCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGATCTTG--TTTTTTTCACTATCACTTCTTTATTGACCATATAA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168286 709 - 81552678 GAAGCTGATTTTTAAAGTACTGAGATCATATAGATGACGGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GAGGGTATCAAT-ATCGTTGTGACTA-----------TT----GGGGAGGAAAA----AATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTTA--AACTT----------TGGCTTTA---ATTTAACAAATGTTCTCTGAGGCGACAGTGTATAGGTAACCATGC---------------------TATTCCCATTCACAGACTAAGTAGAGGGAAGAATTTCTCAAAGACAACTG---TTCTAAGATTGAAAGTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATATCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACAGTACATCAAATCAGTATTTG-ATAAGCTTTCAAATTACAAGGACAAATGGATC--GTCTTGACTCTTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGAAAACATCAGCTGCTCTCATTGTATGCTCTCCCCAAGCCAAAAG--CTG--AAGTTCGTCAATCAATG--TGTCTAAGTGTTCACTAGTTATATACCATTTTGTAGTTTAA-GCTATCTTTCCAACTTCCTAAATCATCACCTTCATTTGTCCTTG-TTTTTTTCCACTATCACTTCTTTATTGACCACATAA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133473944 711 - 185818997 GAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GTGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------TGGTTTTA---ATTTAACAAATGTTTTCTGGGGTGACAGTATATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAGAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCCGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCATTCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCATCTTCATTTGTTCTTG-CTTTTTTCCACTATCACTTCCTTATTAACCATATAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67303627 711 + 192294377 GAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GTGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------TGGTTTTA---ATTTAACAAATGTTTTCTGGGGTGACAGTATATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAATAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCGAAAG--CTG--AAGTTCATCATTCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTG-CTTTTTTCCACTATCACTTCCTTATTAACCATATAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2785486 711 + 3123512 GAAGCTGATTTTTAAAATATTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GTGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------TGGTTTTA---ATTTAACAAATGTTTTCTGGGGTGACAGTATATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAGAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTCCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTACATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTG-CTTTTTTTCACTATCACTTCCTTATTAACCATATAA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506165 709 + 10077455 GAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGT--TGGCTA-----------TT----GAGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--aactt----------tggcttta---atttaacaaatgttttctggggtgacagtaTATATGTACCCATGT---------------------TATTCCTATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAATCGTACGGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTG-CTTGTTTCCACTATCACTTCCTTATTAACCATATAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5711850 711 + 127223203 GAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACTTGAAAAATAGACCACATGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GGGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--aactt----------tggcttta---atttaacaaatgttttctggggtgacagtaTATATGTACCCATAT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCATACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAAGTA--TGCGATGATAATTAGCAATGGTTGTTAACACGATACATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTCTTCAACTTCCTAAATCATCACCTTCATTTATTCTTG-CTTTTTTCCACTATCACTTCCTTATTGACCATATAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1178834 709 - 1799296 GAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACTTGAAAAATAGACCACACGAAGCTTTATGTTAAAAGGTGT--GGGGATATCAAT-ATTGT--TGGCTA-----------TT----GAGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--aactt----------tggcttta---atttaacaaatgttttctggggtgacagtaTATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTCTCCAAGACAACTG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCCAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAATGCCAGGTA--TGCGATGATAATCAGCAATGGTTGTTAACACGATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTATTATGCTGAGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTTAGTGCTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTATCTTTTCAACTTCCTAAATCATCACCTTCATTTGTTCTTG-CTTTTTTCCACTATCACTTCCTTATTAACCATATAA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1755694 711 + 6934359 AAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGCACCTGAAAAATAGACCACACGAAGCTTTATGTTAAAACGTGT--GGGGATATCAAT-ATTGTTATGGCTA-----------TT----GGGGAGGAAAA-----ATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--aactt----------tggcttta---atttaacaaatgttttctggggtgacagtaTATATGTACCCATGT---------------------TATTCCCATTCACAGATGCACTAAAGGGAAGAATTTTTCCAAGACAACCG---TTCTAAGATTGAAATTAAACCGTACTGGGTTTGAAAAGAGAAAGTCTAGGAATTACCAAATATTTTAGATGTCAGACAAAAGAGAATGCCAGCTA--TGCGATGATAATCAGCAATGGTTGTTAACACAATACATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCCTTAGTAGA---TTAATCTTACTATGCTGAGATGTCTTTTCCTCTGTTTTTCCACAAGGAGATCACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCACCAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAAGTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-GCTGTCTTTTCTACTTCCTAAATCATCACCTTCATTTGTTCTTG-CTTTTTTCCACTATCACTTCCTTATTGACCATATAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108117938 712 - 128169293 GAAGCTGA-TTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTG---GGGGATATAAAT-ATTGTTATACCTA-----------TT----GGGGAGGAAAA----AATTAGTGAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------CTACTTGA---ATTTAACACATTTTCTCTGGGGTGACAGTATATATGTATCCATGT---------------------TATTCCCATTCACAGAGGCACTAGAGGTAAGAATTTCTCAAAAACAACTGAGAATCTAAGACTAAAATGAAACCCTACTGGATTTGAAAAGAGAAGGTCCAGAAATT-CCAAATATTTTAGATGTCAGATAACAGAGAATGCCAGGTGTATGCGATGATAATCAGCAATGATTGTTAACACAATATATCAAATCAGTATTTGAATTAGCTTTTAAATTACAAGGACGAATGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGCTGGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAAA--CTG--AAGTTCATCAATCAATG--TCTCTAACTGTTCACTAGTTATATACAGTTTTGTAGTTTAA-G--CTCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTG-TTTTTTTCCACTATCACTTCCTTATTGACCATATAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 735285 721 - 18371965 GAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAGACAACACCAAGCT---TGTTAAAAGGTGT--GGGGATATAAAT-ATTGTTATGCCTA-----------TT----GGGGAGG-AAA----AATCAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------CTACTTGA---ATTTAACAAATTTTCTCTGGGGTGACAGTATATGTGTATCCATGTGTATATATGAATCCATGAATGTATTCCCATTCACAGATGCACTAGAGGTAAGAATTTCTCAAAAACAGCTG---TTCTAAGACTGAAATGAAACCCTACTGGATTTGAAAAGAGAAAGTCCAGAAATT-CCAAATATTTTAGGTGTCAGATAACAGAGAGTACCAGGTT--TGTGATGATAATCAGCAATGGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGCTTTTGGATTACAAGGACAAACGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGCTGCGATGTCTTTTCCCCTGGTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTTGCTAAGCCAAAAG--CTG--AATTTCATCAATCAATG--TCTCTAACTGTTCACTAGTTGTATACACTTTTGTAGTTTA--------TTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTG-TTTTTATTCACTATCGCTTCCTTATTGACCATATAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1394739 693 + 3566421 GAAGCTGATTTTTAAAATACTGAAATCATATAGATGACAGTACCTGAAAAATAG----CACCAAGCTTTGTGTTAAAGGGTGT--GGGGATATAAAT-ATTGTTATTCCTA-----------TT----GGGGAGGAAAA----GATTAGTAAAACCAGTGAGTTGAAGCTATTGCTTGA--AACTT----------CTACTTGA---ATTTAATAAATTTTCCCTGGGGTGACAATATATATGTATCCATGT---------------------TATTCCCATTCACAGATGTGCTAGAGGTAAGAAATTCTCTAAAACAACTG---TTCTAAGACTGAAATGAAACCCTACTGGATTTGAAAAGAGAAGGTCCAGAAATT-TCAAATATTTTAGATATCAGATAACAGAGAATGCCAGGTA--TGAGATGATAATCAGCAATGGTTGTTAATACAATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGTATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTTTGCTAGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATT------------ACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAAC--CTG--AAGTTCATCAATCAATG--TCTCTAACTGTTCACGAGTTATATACAGTTTTGTAGTTTAA-G--CTCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTG-TTTTTTTCCGCTATCACTTCCTTGTTGACCATATAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1896616 711 - 9267652 GAAGCTGATTTTTAAAATACCGAAATCATATAGATGACAGCACCTGAAAAATAGACAACACCAAGCTTTATGTTAAAAGGTGT--GGGGATATAAAT-ATTGTTATGCCTA-----------TT----GGGGAGGAAAA----AATTAGTAAAACCAGTGAGTTAAAGCTGTTGCTTGA--AACTT----------CTACTTGA---ATTTAACAAATTTTCTCTGGGGTGACAGTATATATGTATCCATGT---------------------TATTCCCATTCACAGATGCACTAGAGGTAAGAATTTCTTAAAAACAACTG---TTCTAAGACTGAAATTAAACCCTGCTGGATTTGAAAAGGGAAGGTCCAGAAATT-CCAAATATTTTAGATGTCAGATAACAGAGAATGCCAGGTA--TGTGATGATAATCAGCAATGGTTGTTAACACAATATATCAAATCAGTATTTGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGCTGGGATGTCTTTTCCCCTGTTTTTCCACAAGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCTCGCTAAGCCAAAAG--CTG--AAGTTCATCAATCAATG--TCTCTAACTCTTCACTAGTTATATACAGTTTTGTAGTTTAA-AATATCTTTCCAACTTCCTAAATCATCACCTTCATTTGTTCTTG-TTTTTTTCCACTATCACTTCCTTATTGACCATATAA i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12759312 691 + 14340318 GGAGGTGATATTTAAAATATTGA-ATCATATGAGTGACAGTAC-------------------------------AGAAGTTGTAGGGGAAAATAAAT-AAGGT--GTGCCA-----------TTAAGGGAGGAGAGAAA-----ATTTAACAAACTAATGAGTCAAAAATGTTAATTCC--AACTTGTTGCTATTCTAATGCAA---ATTGCACCAATGTTCTCCAGGGTGACGG-GTATGTGTATCTGTGC---------------------TATTCCTGTGCACAGATGTACT-GAGGGAAAGATTTCTCAGAGACAACTG---CTCCAATATTGAAATTAAGCCATCCTGGCTCTGAAAAGAGAAAACCTAGGAATTACCAAATATTTTAGATGTCAGATAAAAGAGAACGCCAGGGA--TGTGATGATAATCAGAAGTGGTTGTTAACGCAATATGTCAAATCAATATTTAAATTAACTTTTGAATTACAAGGACAAATGGATCAAGTCTTGACTCTTTAGTAGA---TTAATCTTATTATGTTCAGATTTCTTTTCCCCTGTTTCTCCACAAGGAGATTACAAATTTGCCAACCTTAGCTGGTCTCATTTTACACTCTTGTTAAGCCAGAAG--CTATTCAGTTCATCAATCAATGTCTCTCTAAGTGTGCACTGGTCATATACAGTTTTGTGGTTTAA-GCTGTTTTTCCAGCTTCCTAAATTATCACTTCTATTTG----TG-TTCTTTTTCACTATCACTTCCTTATCAACCATATAA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51767341 729 - 55844845 GGAATTAATTTTTCAAACACTGA-ATCATATAGATGACAGTACAGAAGAACCGGAAGGCCCCAGCCTTCATGGTAAAGGAAATA-GGGGAAGTTAATCATTTATGTGGATGGAGACATAAATTT----GGAGAGGAGAAAACAAATTAGCAAAATTGATGAGTGAAAGCTGTTGATATACTAACGC----------AAATTTAATGCATTTAACACATGTTGTCTGGGGTGACATTATGTAGGCATCCATGG---------------------TTTCCACATTCGTAAATGTGGTAGAGAGAAAGATTTCTCAGAGGAAACTA--------AGATTGAAAATAGGCTATATACGGTT---GAAGAGAAAGTCC-GAGATTACTGAATATTTTAGATGTCAGATACAAGAGAATGACAGGTG--TGCTATGATAATCAGCAATGGCTGTTAACACAATATATCAGATCAGTATATGAATTAGCTTTTGAATTACAAGGACAAATGGATCAAGTCTTAAGTCTTTAATAGATTCTTCTTCTTATTATGCTGAGATGTCTTTTTCCATGTTTTTCCACAGGGAGATTACAAATTTGCAAACCTCAGCTGCTCTCATTTTATGCTCCCACTAAGCCAGAAGCTCTA--TAGTTCATCAATCAATG--TCTCTAAGTGCTCACAAGTTATATACAGTTTTGTAGCTTAATGCTGCCTTTCCAACTTCCTAAATTATCACCTTCATTTATTCTTG--TTTTTTTCACTCTCACTTACTTATTAATCATAATA i canFam3.chr18 C 0 C 0 e panPan2.chr12 82708199 997 - 135337776 I a score=2853.000000 s hg38.chr22_KI270732v1_random 20544 10 + 41543 AGA--ATATAAA---- s panTro5.chr2B 114766182 10 - 133216015 GGA--ATATATG---- i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 134923 10 + 150013 AGA--ATATAAA---- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40168995 10 - 81552678 AGA--ATATAAG---- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133474655 6 - 185818997 AGA--ATG-------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304338 6 + 192294377 AGA--ATG-------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786197 6 + 3123512 AGA--ATG-------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506874 6 + 10077455 AGA--ATG-------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5712561 6 + 127223203 AGA--ATG-------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1179543 6 - 1799296 AGA--ATG-------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756405 8 + 6934359 AGAATATG-------- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108118650 10 - 128169293 TTA--ATATAAG---- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736006 10 - 18371965 TGA--ATATAAG---- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1395432 10 + 3566421 TGA--ATATAAA---- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1897327 10 - 9267652 TGA--ATATAAG---- i aotNan1.NW_018514471v1 C 0 C 0 s eulMac1.LGHX01002934v1 49534 10 - 53121 TGA--AAATAAA---- i eulMac1.LGHX01002934v1 N 0 N 0 s eulFla1.LGHW01002964v1 49836 10 - 53611 TGA--AAATAAA---- i eulFla1.LGHW01002964v1 N 0 N 0 s otoGar3.GL873564 12760003 10 + 14340318 TGA--AAAGAAA---- i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768070 12 - 55844845 --A--AAATAAGACAG i canFam3.chr18 C 0 C 0 e panPan2.chr12 82708199 997 - 135337776 I a score=1553627.000000 s hg38.chr22_KI270732v1_random 20554 189 + 41543 TAAGTTCTTATTTTGTTATTGTTCATTTTAGTCTAATTTCATCAAAAT-ATCATAATTTTTT-ATTTCATTT-------------------TAATTTCAAAGATTAA-------------ATGAAACCTACATAGAAATGAGTGTAAAATTTGCATTTGCATTA-TTTTGGCATCAATTTGCTATCCTCCCTCATACACAT------AGAGATCATTTCCATGTATGTGA s panTro5.chr2B 114766192 190 - 133216015 TAAGTTCTTATTTTGTTATTGttcattttagtctaatttcatcaaaat-atcataatcctttaatttcattt-------------------taatttcaAAGATTAA-------------ATGAAACCTACATAGAAATGAGTGTAAGATTTGCATTTGCGTTA-TTTTGGCATCAATTTGCTATCTTCCCTCATACACAT------ACTGATCATTTCCATGTACGTGA i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 134933 189 + 150013 TAAGTTCTTATTTTGTTATTGTTCATTTTAGTCTAATTTCATCAAAAT-ATCATAATTTTTT-ATTTCATTT-------------------TAATTTTAAAGATTAA-------------ATGAAACCTGCATAGAAATGAGTGTAAGATTTGCATTTGCATTA-TTTTGGCATCAATTTGCTATCCTCCCTCATACACAT------AGAGATCATTTCCATGTACGTGA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40169005 190 - 81552678 TAAGATCTTATTTTGTTATTGTTCATTTTAGTCTAATTTCATCAAAAT-ATAATAATCCTTTAATTTCACTT-------------------TAATTTCAAGGATTAA-------------ATTAAACCTACGTATAAATGAGTGTAAGATTTGCATTTGCATTA-TTTTGGCATCAATTTGCTATCCTCCCTCATACACAT------AGAGATCATTTCCATGTACATGA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133474661 183 - 185818997 -------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAAT-TTAATAATCCTTTAATTTCATTT-------------------TAATTTCAAAGATTAA-------------ATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCATACACAT------AGAGATCATATCCATGTACCTCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304344 183 + 192294377 -------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAAT-TTAATAATCCTTTAATTTCATTT-------------------TAATTTCAAAGATTAA-------------ATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCATACACAT------AGAGATCATATCCATGTACCTCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786203 183 + 3123512 -------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAAT-TTAATAATCCTTTAATTTCATTT-------------------TAATTTCAAAGATTAA-------------ATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGCCCTCCGTCATACACAT------AGAGATCATATCCATGTACCTCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2506880 183 + 10077455 -------TTATTTT-TTATTGTTCATTTTACTCTACTTTCATCAAAAT-TTAATAATCCTTTAATTTCATTT-------------------TAATTTCAAAGATTAA-------------ATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCATACACAT------AGAGATCATATCCATGTACCTCA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5712567 183 + 127223203 -------TTATTTT-TTATTGTTCATTTTTCTCTAATTTCATCAAAAT-TTAAAAATCCTTTAATTTTATTT-------------------TAATTTCAAAGATTAA-------------ATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTAGTTTTGGCGTCAATTTGCTGTCCTCCCTCATACACAT------AGAGATCATATCCATGTACCTCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1179549 183 - 1799296 -------TTATTTT-TTATTGTTCATTTTACTCTAATTTCATCAAAAT-TTAATAATCCTTTAATTTCATCT-------------------TAATTTCAAAGATTAA-------------ATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTGCTGTCCTCCGTCATGCACAT------AGAGATCATATCCATGTACCTCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756413 183 + 6934359 -------TTATTTTGTTATTGTTCATTTTACTCTAATTTCATCAAAA--TTAATAATCCTTTAATTTCATTT-------------------TAATTTCAAAGATTAA-------------ATTAAACCTACATATAAATGAATGTAAGATTTGCATTTGCATTATTTTTGGCATCAATTTACTGTCCTCCCTCATACACAT------AGAGATCATATCCATGTACATGA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108118660 191 - 128169293 TAGCTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTGCACCAAAAT-TTAATAATCCTTTAATTTTATTT-------------------TAATTTCAAAGATTAC-------------ATTAAATCTACATATAAATGAGTGTAAGATTTGCATTTACATTGTTTTGGGCATCAATTTGCTATACTCCCTCATACACAT------AGAGATCATATCCATGCACATGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736016 190 - 18371965 TAACTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTTCACCAAAAT-TTAATAATCCTTTAATTTCATTT-------------------TAATTTCAAAGATTAC-------------ATTAAACCTACATATAAATGAGTGTAAGATTTGTATTTAAATTGTTTTTGGCATCAATCTGCTGTACTCCCTCATACACAG------AGAGATTATATCCA-GCACATGG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1395442 190 + 3566421 TAACTTCTTATTTTGTTAGTGTTCATTTTAGTGTAATTTCACCAAAAT-TTAATAATCCTTTAATTTCATTT-------------------TAATTTCAAAGATTAC-------------ATTAAACCTACATATAAATGAGTGTAAGATTTGCATTTACATTGTTTTTGGCATCAATCTGCTACGCTCCCTCATACACAG------AGAGATTATATCCA-GCACATGA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1897337 191 - 9267652 TAACTTCTTATTTTGTTAGTGTTCATTTTAGTCTAATTTCACCAAAAT-TTAATAATCCTTTAATTTCATTT-------------------TAATTTCAAAGATTAC-------------ATTAAACCTACATATAAATGAGTGTAAGATTTGCATTTACATTGTTTTTGGCATCAATTTGCTGTACTCCCTCATACACAT------AGAGATCATATCCATGCACATGG i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12760013 133 + 14340318 -------------------------------------------ACAATCTTAATAATCTTTGAATTTCACTT-------------------ACACTTCAAAGATT------------------AAACCCA--------------TGCGACTAATTTTTACATTA-TTTTGGCATCAATTTTTGATTCTCCTTCACACACAT--AAACAGAGACCATATGCAAGCCCATGA i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768082 227 - 55844845 CAACTCCCTATCCCATTATTGTGAACTTTAGTCAACTTTC-TCCAAAT-TTAATAATCTTTGAATTCTTTCTCTCTCCatatatatatatataatatacataataatatatataatatatatTAAATCTGAGCATAAGCAAATATGTGCTTTGCATATACTGCATTATTAGTGTGAGTGTGCTATACCCCTCCATACACATGCAAGTAGAGA-CATACCCATATCCACAA i canFam3.chr18 C 0 C 0 e panPan2.chr12 82708199 997 - 135337776 I a score=3213165.000000 s hg38.chr22_KI270732v1_random 20743 306 + 41543 TTTCAAACATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCATGATACAATTACtatataaacttcctcttgctgctgtaaccaattaacacaaacttcatatcttacaataaagtgatt-gt------ta--atcctacagttctggagttcagaagacttaaatgagactcacagggctaacatcaagttttcggcagggctgcagtctttctgag-gcctac-gtggcagaatctatgtagttgatttttttcagcatccagaggccacctttcttccttggaacatgacctcattctt s panTro5.chr2B 114766382 306 - 133216015 TTTCAAACATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTCATTTTCGTGATACAATTACtatataaacttcctcttgctgctgtaaccaagtaccacaaacttcatatcttacagtaaagtgact-gg------ta--atcttacagtactggagctcagaaggcttaaatgagactcacagggctaacatcaagttttgggcagggctgcagtctttctgag-ggctct-gtggcagaatctatgtacttgatttttttcagcatccagaagccacctttattccttggaacatgacctcattctt i panTro5.chr2B C 0 C 0 s panPan2.chr12 82709196 305 - 135337776 TTTCAAACATCCAAG-----------------TGCTGTATTAAAAGCAGTTGTAAATTATCGTTCTCATTTTCATGATACAATTACAAtataaacttcctcttgctgctgtaaccaattaccacaaacttcatatcttacaataaagtgacc-gt------ta--atcctacagttctgtagttcagaagccttaaatgaaactcacagggctaacatcaagttttgggcagggctgcagtctttctgag-ggctat-gtggcagaatctat-tacctgatttttttcagcatccagagaccacctttattccttggaacatgacctcattttt i panPan2.chr12 I 997 C 0 s gorGor5.CYUI01000341v1 135122 306 + 150013 TTTCAAACATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAATTATGGTTCTGATTTTCATGATACAATTACtatataaacttcctcttgctgctgtaaccaattaacacaaacttcatatcttacaataaagtgatt-gt------ta--atcctacagttctggagttcagaagacttaaatgagactcacagggctaacatcaagttttgggcagggctgcagtctttctgag-ggatac-gtggcagaatctatgtacttgatttttttcagcatccagaggccacctttattccttggaacatgacctcattctt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40169195 305 - 81552678 TTTCAAATATCCAAG-----------------TGCAGTATTAAAAGCAGTTGTAAGTTATGGTTCTCACTTTCATGATACAATTACtatataaacttcctcttgctgctgtaaccaattaccacaaacttcatatcttacaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaat-agactcacagtgctaacatcaagttttgggcagggctgtagtctttctgag-ggctat-gtggcacaatctatgtacttgatatttttcagcatccagaggccacctttattccttggaacatgacctcattctt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133474844 322 - 185818997 TTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttgat-tttttcagcatccagaggccaccttcattccttggaacatggcctcattctt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304527 322 + 192294377 TTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttgat-tttttcagcatccagaggccaccttcattccttggaacatggcctcattctt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786386 322 + 3123512 TTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttgat-tttttcagcatccagaggccaccttcattccttggaacatggcctcattctt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507063 322 + 10077455 TTTCAAATATCCAAGCAACAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-gactat-gtggcagaatctatgtacttgat-tttttcagcatccagaggccaccttcattccttggaacatggcctcattctt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5712750 322 + 127223203 TTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGCTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcaatctttctgag-ggctat-gtggcagaatctatgtacttgat-tttttcagcatccagaggccaccttcattccttggaacatggcctcattctt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1179732 322 - 1799296 TTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgact-gt------ta--atcctacagttctggagttcagaagccttaaatgagattcacagggctaacatcaagttgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctatgtacttgat-tttttcagcatccagaggccaccttcattccttggaacatggcctcattctt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756596 323 + 6934359 TTTCAAATATCCAAGCAAGAAGGCGGGAAGGTTGCAATATTAAAAGCAGTTGTAAATTATGGTTCTCACTTTCATGATAAAGTTACtatataaacttcctcttgctgctgcaaccaattaccacagacttcatctcttagaataaagtgactggc------ta--atcctacagttctggagttcagaagccttaaatgagattcacagggctaacgtcaagctgtgggcagggctgcagtctttctgag-ggctat-gtggcagaatctgtgtacttgat-tttttcagcatccagacgccaccttcattccttggaacatggcctcattctt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108118851 321 - 128169293 TTTCAAACATCCAAGCAAGAAGCTGGGAAGGGTGCAATATTAAAAGCAGTGGTCAATTACGGTTCTCAACTTCATGACAAAATCACtatatcaacttactcttgctgctggaatcagttgccacaaacttagtatc-tacaataaagtgact-gt------ta--atcttacagttctggagttcagaagtctgaaatgagactcacagggttaatgtcaagttgtgggctgggctgcattctttctgag-gatgct-gtggcagaaactatgtacttaat-tttttcagcatctagaggccaccttcattccttggaacgtggcctcattctt i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 736206 320 - 18371965 TTTCAAACATCCAAGCAAGAGGATGGGAAGGTTGCAATATTAAAAGCAGTGGTCAATTATGGTTCTCACTTTGATGATAAAATTACtatataaacttcgtctcgctgctataaccagttgccacaaacttagtttt-tacaataaagtgact-gt------ta--atcttacaattctggagttcagaagtctgaaatgagattcacagggctaactttgagttgttagc-aggctgcattctttctgag-gactat-gtatcagaacctatgcacttaat-tttttctgtgtctagaggccaccttcattccttggaacacggcctcaatctt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1395632 321 + 3566421 TTTCAAGCATCCAAGCAAGAAGATGGAAAGGTTGCAACATTAAAAGCAGTGGTCAATTATGGTTCTCACTTTCATGATAAAATTGCtatataaacttcctcttgctgctgtaaccagttgccaccaacttagtatc-tacaataaagtgact-gt------ta--atgttacagttctggagttcagaagtctgaaatgagactcacagggctaacgtcgagttgttggcagggctgcattctttctgag-gacgat-gtggcagaatctatgtatttaat-tttttctgcttctagaggccaccttcattccttggaacatggccccattctt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1897528 322 - 9267652 TTTCAAACATCCAAGCAAGAAGATGGGAAAGTTGCAATATTAAAAGCAGTGGTCAATTACGGTTCTCACTTTCATGATAAAATTACTATTTAAACttcctcttgctgctgtaaccagttgccacaaacttagtatcttacaataaagtaact-gt------ta--atctgacagttctggagttcagaagtctgaaatgagactcacagggctaacatcgagttgtgggcagggctgcattctttctgag-gacgat-gtggcagaatctatgtacttaat-tttttctgtgtcaagaggccaccttcattccttggaacatggcctcattctt i aotNan1.NW_018514471v1 C 0 C 0 s otoGar3.GL873564 12760146 320 + 14340318 TTTCAG----TCAAGC-AGAACACAGGCATGTT----TAGTAAGACTGGTGGTAAATTACGGTCATCAGTCTCACAGTGGGATTAGtgtatgagcttcctattgctactgcaacaaattgccacaaatttagtgatgcaaaacaagccaact-atgtaatgtt--atcctaccattccagcagtcagaagtctgaagtggggcttccaaggctaaaatcaagctgtggacaggtcccctcttcctcccagcagctgt-gtgggaggatctgttcctttgat-ttttccagcatctgggcactgccttcattccttggaccacagcctctctctc i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768309 307 - 55844845 TATCAAACATCCAACCAAGGA-ACAAAAAGGTTGCAGTTGTAGGACCAGTGATAAATCATAGTCCCCTCTCTTGAGATAAGATTAGtgtattagcttc------ttgctgtaacagattaataccaatttagcgaattaaaacaaa-taaat-gt------tattatcttcaagtc----------aaagtctgaagtaggaccaaaagcagaaagtcaaggttatcgggagggctgccttcctactgca-ggctttaatgggaaaatgttttccttcaat-atttccagcatgtggagattgcctgcattccttggctcatggcttcactctt i canFam3.chr18 C 0 I 58 a score=5457.000000 s hg38.chr22_KI270732v1_random 21049 8 + 41543 atatc------tta s panTro5.chr2B 114766688 5 - 133216015 atatc--------- i panTro5.chr2B C 0 C 0 s panPan2.chr12 82709501 8 - 135337776 agatc------cta i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 135428 8 + 150013 atatc------cta i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40169500 5 - 81552678 ttatc--------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133475166 9 - 185818997 acatc-----ttct i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304849 11 + 192294377 tcatctt---tttt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786708 8 + 3123512 acatc------ttc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507385 8 + 10077455 acatc------ttc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713072 14 + 127223203 acatcttttctttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180054 14 - 1799296 acgtcttctttttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756919 14 + 6934359 acatcttctttttt i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108119172 8 - 128169293 acatc------tta i calJac3.chr8 C 0 I 5010 s saiBol1.JH378145 736526 8 - 18371965 acatc------tta i saiBol1.JH378145 C 0 I 2167 s cebCap1.NW_016107540v1 1395953 8 + 3566421 acatc------tta i cebCap1.NW_016107540v1 C 0 I 2514 s aotNan1.NW_018514471v1 1897850 8 - 9267652 acatc------tta i aotNan1.NW_018514471v1 C 0 I 2155 s otoGar3.GL873564 12760466 8 + 14340318 ccatc------tta i otoGar3.GL873564 C 0 C 0 e canFam3.chr18 51768616 58 - 55844845 I a score=1729379.000000 s hg38.chr22_KI270732v1_random 21057 359 + 41543 tt----tttttttttttttaagatggagtctccttctgttgcccaggctggagtgcagtggcacgacctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcttcct---gagta----gcttt-gactacaggcatgtgccaccatgcccagttaattttttgtatttttagtagggatgggttttcaccatgttagtcaggatggtctcgatctcctgacctcgtcatccacccaccccggcctcccaaagtgctgggattaggcgtgagccaccgcgctgggtcctcattcttgtatcttaaaagtcagtgatgttgagtaatttcgcatgccaccacctccatggttg s panTro5.chr2B 114766693 355 - 133216015 --------tttttttttttgagatggagtcaccttctgtcgcccaggctggagtgcagtggcacaatctcagctcactgcaacctctgcctcccgggttcaagcgagtctcctgcctcagcttcct---gagta----gcttg-gactacaggcacgtgccaccatgcccagttaattttttggacttttagtagggatggggtttcaccatgttagccagcatggtctcgatctcctgacctcgtgatccacacacgccggcctcccaaagtgctgggattaggcgtgagccaccgcgctgggtcctcattcttgtatcttaaaagtcagtgatgttgagtaatttctcatgccaccacctccatggttg i panTro5.chr2B C 0 C 0 s panPan2.chr12 82709509 361 - 135337776 tt-ttcttttttttttttgtagatggagtctccttctgtcacccaggccagagtgcagtggcacgatctcagctcactgcaacctctgcctcctgggttcaagtgattcttctgcctcagcttcct---ga-ta----gcttg-gacaacaggcacttgccaccacgcccagttaattttttgtgtttttagtagggatggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgataaacccaccccagcctcccaaagtgctggaattaggcgtgagccaccacactgggtcctcattcttgtatcttaaaagtcagtgatgttgagtaatttctcacgccaccacctccaaggttg i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 135436 358 + 150013 t-----tttttttttttttaagatggagtctccttctgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcttcct---gagta----gcttt-gactacaggcacgtgccaccatgcccagttaattttttgtatttttagtagggatgggttttcaccatgttagtcaggatggtctcgatctcctgacttcgtcatccacccacccaggcctcccaaagtgctgggattaggcgtgagccaccgcgctgggtcctcattcttgtatcttaaaagtcagtgatgttgagtaatttcgcatgccaccacctctatggttg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40169505 352 - 81552678 -------ttttttttttttgagatggagtctccttctgttgcccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcctgggttcaagctattctcctgcctcagcttcct---gagta----gcttg-gactacaggcacgtgccaccatgcccagtagagtttttgtgtttttagtagggatggggtttcaccatgttagccagaatggtcttgaactcctgacctcgtgatccacccaccccagcctcccaaagtgctgcgattaggcgtgagccacccctctgggtcctcattcttgtatcttaaaagtcagtgatgt----taatttctcacgacaccacctccatggttg i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133475175 367 - 185818997 tttttttttttttttttttgtgacggagtctcgctctgtcacccagactggagtgcagtggcgcaatctcagctcatcgcaacttccgtctcccaggtccaagtgattctcctgcctcagcctcct---gagtagcttgcttg-gactacaggcacccgctaccatgcccagctaatgttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatcttaaaagtcagcgatgttgagttattcctcacgccgccacctccatggtta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67304860 367 + 192294377 tttttttttttttttttttgtgacggagtctcgctctgtcacccagactggagtgcagtggcgcaatctcagctcatcgcaacttccgtctcccaggtccaagtgattctcctgcctcagcctcct---gagtagcttgcttg-gactacaggcacccgctaccatgcccagctaatgttttgtacttttagtagagacggggtttcaccatgttagccaggatggtctcggtctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatcttaaaagtcagcgatgttgagttattcctcacgccgccacctccatggtta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2786716 363 + 3123512 tttttttttttttttttttgtgacgga----cgctctgtcacccagactggagtgcagtggcgcaatctcagctcatcgcaacttccgtctcccaggtccaagtgattctcctgcctcagcctcct---gagtagcttgcttg-gactacaggcacctgctaccatgcccagctaatgttttgtaattttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatcttaaaagtcagcgatgttgagttattcctcacgccgccacctccatggtta i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2507393 367 + 10077455 ttcttctttttttttttttttttttgagtctcgctctgtcacccagactggagtgcagtggcgcaatctcagctcatcgcaacttccgtctctcaggtccaagtgattcccctgcctcagcctcct---gagtagcttgcttg-gactacaggcacccgctaccatgcccagctaatgttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatcacctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttacatcttaaaagtcagcaatgttgagttattcctcacgccgccacctccatggtta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713086 351 + 127223203 tttttttttttttttttttgagacgacgtctcgctctgtcacc------------cagtggcgcaatctcagctcatcgcaacctccgtctcccaggttcaagtgattcttctgcctcagcctcct---gagta----gcttg-gactacaggcacccgctaccacgcccagctaattttttgtatttttagtagagacggggtttcaccatattagccaggatggtctcgatctcctggcctcatgaatcacccacctcggactcccaaagagctgggattaggtgtgagccaccacgccaggtcctcattcttatatcttaaaagtcagcgatgttgagttatttctcacgccgccacctccatggtta i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180068 361 - 1799296 tttttttttttttttttttt------ttttttgctctgtcacccaggctggagtgcagtggcgcaatctcagctcatcgcaacttccgtctcccaggtccaagtgattctcctgcctcagcctcct---gagtagcttgcttg-gactacaggcacccgcgaccatgcccagctaatgttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcatgattcacccaccccggactcccaaagtgctgggattaggtgtgagccaccacaccaggtcctcattcttacatcttaaaagtcagcgatgttgagttattcctcacgccgccacctccatggtta i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1756933 362 + 6934359 ttttttcttttttttttttgagacggagtctcgctctgtcacccagactggagtgcagcggcgcaatctcagctcatagcaacctccgtctcccaggttcaagtgattctcctgcctcagcctcct---gagta----gcttg-gactacaggcacccgctaccacgcccagctaatttttggtatttttattagagacggggtttcaccatgttagccaggatggtctcgatctcctggcctcgtgattcacccacc-cggactcccaaagtgctgggattaggtgtgagccaccacgccaggtcctcattcttatatcttaaaagtcagggatgttgagttatttctcatgccaccacctccatggtta i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760474 98 + 14340318 -------------------------------------------aaagccaga----aatgccaccatctc-------tgtgttctctcccttctg---------------cctgcctctactacttataaagaa----gcttgcgactaca-------------------------------------------------------------------------------------ctgggctc-------acccacaccgga------------------------------------------------------------------------------------------------------------ i otoGar3.GL873564 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e canFam3.chr18 51768616 58 - 55844845 I a score=1839850.000000 s hg38.chr22_KI270732v1_random 21416 306 + 41543 tctttcttctgccttcttctttcacttataaggaagcttgtgatttcattgatcccactcatttaagataatctctc-catc--attttatc-gc-----aaccttaatttcacttgaaatctaatttccc-actgctttgcaacctaacatatttgtatgttagactctgggaattaggacatgaacatttttgggaggccattcttttgt--ctac----A-GCAGACATAA-TCTATTTACCTGCAGATTAAAGTGTTCTTTATTTTTC-----TGCCTCCCTCTCTT------AA---TTTTTTTTAAATAATGTGA--------ATT-GTAGTAAAGAGAAA s panTro5.chr2B 114767048 305 - 133216015 cctttcttctgccttcttctttcacttataaggaagcttgtgatttcattgatcccacccatttaagataatctctc-catc--attttatt-gc-----aaccttaatttcacttgaaatctaatttccc-actgccatgcaacctaacatatttgtatgttagactttgggaattaggacatgaacatttttgggaggccattcttttgt--atac----A-GCAGACATAA-TCTATTTACCTGCAGATTAAAGTGTTCTTTATTTTTC-----TGCCTCCCTCTCTT------AA----ATTTTTTAAATAATATGA--------ATT-GTAGTAaagagaaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82709870 306 - 135337776 catttcttctgccttcttctttcacttataatgatgtttgtgattacattgatcccacccatttaagacaatctctc-tatc--atttttcc-ac-----aaccttaatttcacttgaaatctaatttcac-actgctgtgcaacctaacatatttgtatgttagactctgggaattaggacatgaaaatttttgggaggccattctttggc--ctac----A-GCAGACATAA-TCTGTTTACCTGCAGATTAAAGAGTTCTTTATTTTTC-----TCTCTCCCTCTCTT------AA---TTTTTTTAAAATAATATGA--------ATT-GTGGTaaagagaaa i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 135794 306 + 150013 cctttcttctgccttcttctttcacttataaggaagcttgtgatttcattgatcccactcatttaagataatctctc-catc--attttatc-gc-----aaccttaatttcacttgaaatctaatttccc-actgccacgcaacctaacatatttgtatgttagactctgggaattaggacatgaacatttttgggaggccattcttttgt--ctac----A-GCAGACATAA-TCTATTTACCTGCAGATTAAAGTGTTCTTTATTTTTC-----TGCCTCCCTCTCTT------AA---TTTTTTTTAAATAATGTGA--------ATT-GTAGTAAAGagaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40169857 305 - 81552678 tctttcttctgccttcttctttcacttataaggaagcttgtgatttcattgatcccagccatttaagataatctctc-cgtc--attttatt-gc-----aaccataatttcatttgaaatctaatttccc-actacaatgcaacctaacatattcgtatgtaagactctgggaattaggacatgaacatttttgggaggccattattttgt--ctCC----A-GCAGACATAA-TCTATTTACCTGCAGATTAAAGTGTTCTTTATTTTTT-----TTCCTCCCACTCTT------AA----TTTTTTTAAATAATATGA--------ATT-ACAGTAAAGATAaa i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133475542 306 - 185818997 tctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--attttatt-gc-----aaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattatttcgc--ctac----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTATTTTTC-----TGCTTCCCTCTCTT------AA---TTTTTTAAAAATAATATGG--------ATT-GTAGTaaagagaaa i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305227 306 + 192294377 tctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--attttatt-gc-----aaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattattttgc--ctac----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTATTTTTC-----TGCTTCCCTCTCTT------AA---TTTTTTAAAAATAATATGG--------ATT-GTAGTaaagagaaa i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2787079 305 + 3123512 tctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--attttatt-gc-----aaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatgaacatttttgggaggccattatttcgc--ctac----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTATTTTTC-----TGCTTCCCTCTCTT------AA----TTTTTAAAAATAATATGG--------ATT-GTAGTaaagagaaa i macNem1.NW_012011522v1 C 0 I 641 s cerAty1.NW_012000909v1 2507760 306 + 10077455 tctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--attttatt-gc-----aaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatgaacatttttgagaggccattatttcgc--ctac----A-GTAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTATTTTCC-----TGCTTCCCTCTCTT------AA---TTTTTTAAAAATAATATGG--------ATT-GTAGTAAAGagaaa i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713437 306 + 127223203 tctttcttctgcctcctcctctcacttataaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--attttatt-gc-----aaccttaatttcttttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacctgaacatttttgggaggccattatttcgc--ctaT----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTATTTTTC-----TGCTTCCCTCTTTT------AA---TTTTTTAAAAATAATATGG--------AAT-GTAGTAAAGagaaa i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180429 306 - 1799296 tctttcttctgcctccttctttcacttacaaggaagcttgtgattacattgagcccacccatttaagataatatctc-catc--attttatt-gc-----aaccttaatttcatttgaaatctaatttcct-actgccatgcaacctaacatatttgtatgttaggctctgggaattaggacatggacatttttgggaggccattatttcgc--ctac----A-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTTTATTTTTC-----TGCTTCCCTCTCTT------AA---TTTTTTAAAAATAATATAG--------ATT-GTAGTAAAGagaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757295 306 + 6934359 tctttcttctgcctccttctttcacttataaggaagcttgtgattacattgagcccacccatttaagataatctctc-catc--attttatt-gc-----aaccttaatttcatttgaaatctaatttcat-actgccatgcaacctaacatatttgtatgctaggctgtgtgaattaggacatgaacatttttgggaggccattatttcac--ctac----G-GCAGACAAAA-TCTATTTACCTGCAGATTAAAATATTCTCTATTTTTC-----TGCTTCCCTCTCTT------AA---TTTTTTTAAAATAATATGG--------ATT-GTAGTAaagagaaa i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760572 259 + 14340318 -------------------------------------------------taacctgccccatcttaggt-----------tc--atttgattagc-----aaccttaatttcagttgctatctaatcccctcactgccatgtaatctaatatatttat-----agattctggg--ttagtacatggacatttctgggatgcctttattttccttctac----aTTTAAACATAA-TATATTTACGTATAGATTAAAATGTTCTTGGTTTTCC-----TGCCTCCCACtattttataaaa---caatttcaaaataatacaattagtcttttt-tttttaaaaaaaaa i otoGar3.GL873564 C 0 C 0 s canFam3.chr18 51768674 304 - 55844845 tccctctcctgtctcccttc---------------acttgtgatcacattggattcacccttccaggtccatctcccatatcagagtcgatt-gctcagaaattttaactccatttacagtctaaattccc-actaccatgtaagctaacatagct-----ccaggttctgaagattaggacctgggcattttaaaggtgccattactttct--cttccataG-TTAGACATAAGTCTATTTACCTATAGATTAAAACGATCTTTGTTTTTTCTGTACTCCACCATTTCCT------AAAAGATCTTTGGACATAATATAG--------ATTAGTGGTAGAAA---- i canFam3.chr18 I 58 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I a score=-14541.000000 s hg38.chr22_KI270732v1_random 21722 8 + 41543 TAa------------aagaa- s panTro5.chr2B 114767353 20 - 133216015 gaaagaaaagaaaagaagaa- i panTro5.chr2B C 0 C 0 s panPan2.chr12 82710176 19 - 135337776 gaaagaaaagaaaa-caaag- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 136100 8 + 150013 gaa------------agaaa- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170162 8 - 81552678 gaa------------aagaa- i nomLeu3.chr19 C 0 C 0 s cerAty1.NW_012000909v1 2508066 3 + 10077455 -----------------gaa- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713743 3 + 127223203 -----------------gaa- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180735 3 - 1799296 -----------------gaa- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757601 3 + 6934359 -----------------gaa- i colAng1.NW_012115910v1 C 0 C 0 s otoGar3.GL873564 12760831 8 + 14340318 ------------aaaaaGAA- i otoGar3.GL873564 C 0 N 0 s canFam3.chr18 51768978 7 - 55844845 --------------AAagaag i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133475848 0 - 185818997 C e macFas5.chr3 67305533 0 + 192294377 C a score=474979.000000 s hg38.chr22_KI270732v1_random 21730 166 + 41543 ----acaaaaaagaaggaaggaaagaaggaagg------------------------------------aag--------gaaagaaagaaa--gaagaaagaaaaggaggaaatgagataaggaagga------------agggagggaaggagggagggagggagaaaggcagaaagcgag--aaaaaagaaagcaagaacaca---------------------------------------agaaagaaagaagg---aaagaaagaa--- s panTro5.chr2B 114767373 174 - 133216015 ----agaaaaaagaagaaaggaaagaacaaagg------------------------------------aag--------gaaagaaagaag--aaagaaa-agaagcaggaaatcaga----gaagga------------agggag----ggagggaggaagggagaaaggcaggaagggag--aaaaaagaaagcaagaacacaaggaag-------------------------aaagagagagaaagaaagaaagaataaagaaagga--- i panTro5.chr2B C 0 C 0 s panPan2.chr12 82710195 168 - 135337776 ----ataaaatagaaggaaggaaagaaggaagg------------------------------------aaggaaataaagaaagaaagaag--aaagaaa-acaaggaggaaatgagg----aaagga------------agggagggagggagggaggaagggagaaaggcaggaag-gag--aaaaaagaaagcatgaataca---------------------------------------agaaacaaagaagg---aaagaaagaa--- i panPan2.chr12 C 0 M 752 s gorGor5.CYUI01000341v1 136108 156 + 150013 ----agaaaaaagaa----------aaggaagg------------------------------------aag--------gaaagaaagaaa--gaagaaagaaacggaggaaatgagagaaggaagga------------agggagggaaggagggagggagggagaaaggcagaaagcgag--aaaaaagaaagcaagaacaca---------------------------------------agaaagaaagaagg---aaagaaagaa--- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170170 192 - 81552678 ----agaaaacggaaggaaagaaggaagggagg------------------------------------aag--------gaaagaaagaa-----------agaaggaggaaatgaga----gaagga------------aggaagggagtgagggaggaaaagagaaaggcgggaagggag--aaaaaagaaagcaagaacacaagagagagaaagaaagaaaggaaagaaagaaagaaagaaagaaagaaagaaag---aaagaaagaa--- i nomLeu3.chr19 C 0 I 24 s rheMac8.chr3 133475848 143 - 185818997 -----gaaagaaaaagaaaga------------------------------------------------aaa--------gaaagaaagaaa--aaagaaa-agaaggagaaaatgaga----gaagga------------aagaagggagggaggaaggaagggagaaaagcaggaagggagaaaaaaaagaaagcaagaacacc---------------------------------------agaaagcaagaaag---caa---------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305533 143 + 192294377 -----gaaagaaaaagaaaga------------------------------------------------aaa--------gaaagaaagaaa--aaagaaa-agaaggagaaaatgaga----gaagga------------aagaagggagggaggaaggaagggagaaaagcaggaagggagaaaaaaaagaaagcaagaacacc---------------------------------------agaaagcaagaaag---caa---------- i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2508069 146 + 10077455 ----agaaaaagaaaaaaaga------------------------------------------------aaa--------gaaagaaagaaa--aaagaaa-agaaggagaaaatgaga----gaagga------------aagaagggagggaggaaggaagggagaaaagcaggaagggag-aaaaaaagaaagcaagaacacc---------------------------------------agaaagcaagaaag---caagaa------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713746 207 + 127223203 ----agagaaagaaagaaagaaag-aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa--------gaaagaaagaaaagaaagaaa-gaaagGAGAAAATGAGA----gaaggaaggaagagagggaggaagagagggaggaaggaagggagaaaagcaggaagggag-aaaaaaagaaagcaagaacacc---------------------------------------agaaagcaagaaag---caagaa------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180738 146 - 1799296 ----agaaaaagaaagaaaga------------------------------------------------aaa--------gaaagaaagaaa--aaagaaa-agaaggagaaaatgaga----gaagga------------aagaagggagggaggaaggaagggagaaaagcaggaagggag-aaaaaaagaaagcaagaacacc---------------------------------------agaaagcaagaaag---caagaa------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757604 177 + 6934359 ----ggaaaaagaaagaaagaaagaaaaaaaagaaagaaagaagaaaagaag-----------------aaa--------ggaagaaagaaa--gaagaaa-agaaggagaaaatgaga----gaagca------------aggaagggaaggaggaaggaagggagaaaagcaggaagggag-aaaaaaagaaagcaagaacacc---------------------------------------agaaagcaagaaag---caagaa------- i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51768985 165 - 55844845 gtggaggaggagatggagaggaggggaggaag-------------------------------------agg--------aagaggaagaa---gaggagg-aaaagaagaaaaggaga----agaaga------------agaaagaagaagaagaagaagaaga-agaagaagaaaagaag--aagaagaagaagaagaagaag---------------------------------------aagaagaagaagaa---gaagaagaagaag i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I a score=41415.000000 s hg38.chr22_KI270732v1_random 21896 13 + 41543 aggaggaagggag s panTro5.chr2B 114767547 13 - 133216015 aggaggaagggag i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 136264 13 + 150013 aggaggaagggag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170386 13 - 81552678 aggaggaatggag i nomLeu3.chr19 I 24 I 11 s rheMac8.chr3 133475991 8 - 185818997 -----gaagggag i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67305676 8 + 192294377 -----gaagggag i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2508215 13 + 10077455 gggaggaagggag i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5713953 13 + 127223203 gggaggaagggag i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1180884 13 - 1799296 gggaggaagggag i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757781 13 + 6934359 gggaggaagggag i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51769150 11 - 55844845 aagaagaagaa-- i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e panPan2.chr12 82710363 752 - 135337776 M a score=181529.000000 s hg38.chr22_KI270732v1_random 21909 38 + 41543 gaaggaaaggaggaagagagaatggtaaaagggaggaa s panTro5.chr2B 114767560 38 - 133216015 gaaggaaaggaggaagagagaatgttaaaagagaaaaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82711132 38 - 135337776 gaaggaaaggaggaagagagaatggtaaatgggaggaa i panPan2.chr12 M 752 C 0 s gorGor5.CYUI01000341v1 136277 38 + 150013 gaaggaaaggaggaagagagaatggtaaaagggaggag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170410 38 - 81552678 ggaagagagaaggaagagagaatggtaaaagggaggaa i nomLeu3.chr19 I 11 C 0 s rheMac8.chr3 133475999 38 - 185818997 gaagaaaaggaggaagagagaatggaaaaaggggggaa i rheMac8.chr3 C 0 I 436 s macFas5.chr3 67305684 38 + 192294377 gaagaaaaggaggaagagagaatggaaaaaggggggaa i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2508228 38 + 10077455 gaagaaaaggaggaagagagaatggaaaaaggggggaa i cerAty1.NW_012000909v1 C 0 I 462 s chlSab2.chr21 5713966 38 + 127223203 gaagaaaaggaggaaaagagaatggaaaaaggggggaa i chlSab2.chr21 C 0 I 340 s manLeu1.NW_012105809v1 1180897 38 - 1799296 gaagaaaaggaggaagagagaatggaaaaaggggggaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757794 38 + 6934359 gaaggagaggaggaagagagaatggaaaaaggggggaa i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51769161 35 - 55844845 gaagaagaagaagaagaaagaagaggaggaggagg--- i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I a score=4831.000000 s hg38.chr22_KI270732v1_random 21947 10 + 41543 tgcagagaaa-- s panTro5.chr2B 114767598 9 - 133216015 ggca-agaaa-- i panTro5.chr2B C 0 C 0 s panPan2.chr12 82711170 10 - 135337776 ggcaaagaaa-- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 136315 10 + 150013 tgcagagaaa-- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170448 10 - 81552678 ggcaaagaaa-- i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67305722 10 + 192294377 gggaaaaaaa-- i macFas5.chr3 C 0 I 1 s manLeu1.NW_012105809v1 1180935 10 - 1799296 gggaaagaaa-- i manLeu1.NW_012105809v1 C 0 I 29 s colAng1.NW_012115910v1 1757832 5 + 6934359 gggag------- i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51769196 7 - 55844845 -----aggaaga i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I a score=5887.000000 s hg38.chr22_KI270732v1_random 21957 23 + 41543 ---caaagaaaataaagaggagaa--g------------g s panTro5.chr2B 114767607 35 - 133216015 ---caaagaaaataaagaggagaa--ggaaggaagtaaag i panTro5.chr2B C 0 C 0 s panPan2.chr12 82711180 22 - 135337776 ---tagggaaagtaaagaggcgaa--g------------- i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 136325 23 + 150013 ---caaagaaaataaagaggagaa--g------------g i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170458 23 - 81552678 ---caaagaaaataaagaggagaa--g------------g i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67305733 14 + 192294377 ------------taaagagaaggaag-------------- i macFas5.chr3 I 1 I 63 s colAng1.NW_012115910v1 1757837 18 + 6934359 ------agaaaataaagagaagga---------------- i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51769203 23 - 55844845 ggaggaggaagaggaggaggagg----------------- i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e manLeu1.NW_012105809v1 1180945 29 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I a score=17004.000000 s hg38.chr22_KI270732v1_random 21980 9 + 41543 agggaagga s panTro5.chr2B 114767642 9 - 133216015 aaggaagta i panTro5.chr2B C 0 C 0 s panPan2.chr12 82711202 2 - 135337776 -------ga i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 136348 9 + 150013 aaggaagga i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170481 9 - 81552678 aaggaagga i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67305810 9 + 192294377 aaggaagga i macFas5.chr3 I 63 C 0 s manLeu1.NW_012105809v1 1180974 9 - 1799296 agggaagga i manLeu1.NW_012105809v1 I 29 C 0 s colAng1.NW_012115910v1 1757855 9 + 6934359 aaggaagga i colAng1.NW_012115910v1 C 0 C 0 s canFam3.chr18 51769226 9 - 55844845 aggagATGA i canFam3.chr18 C 0 I 2845 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I a score=170744.000000 s hg38.chr22_KI270732v1_random 21989 84 + 41543 aggatggt--aaaaggaggaaaggaagggaggg----aggaagaacaggagggagggaggaagggagaa-aaaaggaaagaaagcaagaaa s panTro5.chr2B 114767651 88 - 133216015 aggaagga--aaaaggaggaaagaaagggagggacgaaggaagaaaaggtgggaggaaggaagggagaa-aaaaggaaagaaagcaagaaa i panTro5.chr2B C 0 C 0 s panPan2.chr12 82711204 87 - 135337776 aggaagga--aaaaagaggaaaggaagggagggagcaaggaagaaaatgagggcggg-ggaagggagaa-aaaaggaaagaaagcaagaac i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 136357 89 + 150013 aggaaggaggaaaaggaggaaaggaagggagggaggaaggaagaaaaggagggagga-ggaagggagaa-aaaaggaaacaaagcaagaaa i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170490 88 - 81552678 aggaagga--aaaatgagaaaaggaagggagggaggaaggaagaaaaggaggagggg-ggaagggagaataaaaggaaagaaaccaagaaa i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67305819 86 + 192294377 aggaagga--agaa--aggaaaggaagggagggaagaaggaagaaaaggagggaggaagggagaaagaa-aaaaggaaagaaagcaagaaa i macFas5.chr3 C 0 C 0 s manLeu1.NW_012105809v1 1180983 86 - 1799296 aggaagga--agaa--aggaaaggaagggagggaagaaggaagaaaaggagggaggaagggagaaagaa-aaaaggaaagaaagcaagaaa i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1757864 88 + 6934359 aggaacaa--aaaaggaggaaaggaagggagggaagaaggaagaaaaggagggaggaagggagaaagaa-aaagggaaagaaagcaagaaa i colAng1.NW_012115910v1 C 0 I 271 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e canFam3.chr18 51769235 2845 - 55844845 I a score=25783.000000 s hg38.chr22_KI270732v1_random 22073 26 + 41543 ttgagaaagaaa----gaa---------------aagaaaagaag s panTro5.chr2B 114767739 38 - 133216015 gtgagaaagaaa----gaaaaagagaa---aaggaagaaaagaag i panTro5.chr2B C 0 C 0 s panPan2.chr12 82711291 38 - 135337776 gtgagaaagaaa----gaatatgagaa---aagaaggaagaaaag i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 136446 29 + 150013 ttgagaaagaaa----gaagaa------------aagaaaagaag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170578 41 - 81552678 gtgagaaagaaa----gaataagagaaaagaaggaagaaaagaag i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67305905 30 + 192294377 gtgggaaagaatgaaggaa---------------agaaaaagaag i macFas5.chr3 C 0 I 4 s manLeu1.NW_012105809v1 1181069 26 - 1799296 gtgggaaagaat----gaa---------------agaaaaagaag i manLeu1.NW_012105809v1 C 0 I 230 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e canFam3.chr18 51769235 2845 - 55844845 I a score=147945.000000 s hg38.chr22_KI270732v1_random 22099 186 + 41543 -ggagggagaaaggaagggagggaggaaggaaggaagcaaaagaggaaagaa------------agaaggaaggaagg--agaatacaagaaagaaaaagaaagg---------aaaagaaaaaagaaaaggaagaggaaaagaagaaag---taaggaagaagacaagggaagggaaga----gaagggaaaggaagatggaaagaaggaaggaag s panTro5.chr2B 114767777 194 - 133216015 -ggagggagaaaggaagggagggtggagggaagaaagaataagaggaaagaaagaaggaaggggagaaggaaggaagg--agaa-aaaagaaag-aaaagaaaga------aacaagagagaaaagaaaagaaagaggaaaagaagaaag---gaaggaagaaggcaagggaagggaaga---------gaaaggaagatggaaagaaggaaggaag i panTro5.chr2B C 0 C 0 s panPan2.chr12 82711329 204 - 135337776 -ggagggagaaaggatgggagggaggagggaaggaagaataagaggaaagaa-aaaagaaggaaagaaggtaggaagg--agaaaaaaagaaag-aaaagaaggaaagg-aaaagaaaaagaaaataaaaggaagcggaaaagaataaag---gaaggaagaatgcaagggaagggaaga----gaagagaaaggaagatggaaagagcgaaggaaT i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 136475 189 + 150013 -ggagggagaaaggaagggagggaggagggaaggaagaaaaagaggaaagaa----------------ggaaggaagg--agaatacaagaaag-aaaagagagaaaggaaaagataaaagaaaagaaaaggaagagg-aaagaagaaag---gaaggaagaaggcaagggaagggaaga----gaagagaaaggaagatggaaagaaggaaggaag i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40170619 173 - 81552678 -ggagggagaaagaaagggagggaggagggaaggaagaataagaggaaagaa------------agaaggaagcaaag--aaag---aagaaag-gagaaaaaag------------aaagaaaagaaaacaaagagg-aaagaagatac---gaaggaagaaggcaagggaagggaaga---------gaaaggaagatggaaagaaggaaggaag i nomLeu3.chr19 C 0 C 0 s macFas5.chr3 67305939 207 + 192294377 aaaaggagaaaatgaaggaagggagggagggaggaaaagagaaaggcaggaa---------gggagaaaaaaagaaagcaagaacaccagaaag-caagaaaaaaagaaagaaagaaagaagggaggaaggaaggaaggaaaggaggaagagagaatggaaaaaggaagggaaagaaagaaagtaaagagaaggaaggaaggaaagaaggaaagaag i macFas5.chr3 I 4 I 12 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e canFam3.chr18 51769235 2845 - 55844845 I a score=617838.000000 s hg38.chr22_KI270732v1_random 22285 766 + 41543 ACCGCAAATATTAGAAATTCTGGGTTTGTTGCAGAATACGCCATACTGTTTTTTTTTTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGCAgattggatgtcttgttggtgatattgttgttcttatcttccgcatgattactgagattgtgcctagtctgtctattactaagacaaaagtgttgaagtctgcaaa------------tataattttggatttttctagttcacctttgatttctttcatgtttttcctcatgtatttggaggttctgttgttagctgcataccctaattagtaggaggtttacatcttcttgagaattgatgattatattatctattatctctcatctctgatactatttcttgttctgaactctgttgtgtctaatatcaatgtggtccttcccacagctttattttagtgtttccatgatatggctttctccatatcttgaagataacctatttatatctctatatatttgg----agatataaaatttagagttgattttttaaagatttttcaagatgtaattcttatttgtttttgttctatttgacattctctgAGTTTCCTATATCTGAAGTTTGATTTTCTGTCACTTCTTTTAGAATATTTTTGGCAGTTATTTTGAAAAATATTTCTTTGGCTCCATTATTTTTTCCCCTTTTCTTTTTGGGATTTCAATTATAACTAGAGTAGGTAATTTCATctcagtcttatgcaggtactttttctcagggtctcaggaatgtagccttctca s panTro5.chr2B 114767971 755 - 133216015 ACCGTAAATATTAGAAATTCTGGGTTTGTTAGAGAATATGCCATACTG-----TTGTTTTTTTTCACTTGAAAGC-----GTGTCTGCCATTGAAGATCGGATGtcttgttggtgatattgttgttcttatcttccatatgattactgagtttgtgcctagtctgtccattactaagacaaaagtgttgaagtctgcaaa------------tataattttggatttttctagttcacttttgatttatttcatgttttacctcatgtatttggaggttctgttgttagctgcataccctaattagtaggatgtttacatcttcttaagaattgattattatattatttattacttctcaactctgatactatttcttgttctgaactctgttgtgtctaatatcaatgtagtcctt-ccacagctttattttagtgtttccatgacatggctttctccatatctcgatgataacctatttatatctctatatatttggagcaagATATAAAATTTAGAGTTGATTTTTTAAAGATTTTTCAAGATGTAACTCtta----tttttgttctatttgacattctctgagtttcctatatctgaagtttgattttctgtcacttcttttagaatatttttggcagttattttgaaaaatatttcttttgctccattattttttcctcttttctttttgggatttcaattataACTAGGGTAGGTAATTTCATctcagtcttatgcaggtactttttctcagggtctcaggaatgtagccttctca i panTro5.chr2B C 0 C 0 s panPan2.chr12 82711533 762 - 135337776 AACACAAATATTAGAAATTCTGGGTTTGTTAGAGAATATGCCATAC---------ATTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGAAGATAGGATGTCTTGttggtgatattgttgttcttatctttcat----------agtttgtgcctagtctttccattactaagacaaaagttttgaagtctgcaaaatttgaagtctggataattttggatttttctagttcacctttgatttctttcctgttttacctcatgtatttggaggttctgttgttagctgcataacctaattagtaggatatttacatcttcttgagaattgattattctattatctattatctctcatctctgatactatttcttgttccgaactctgttgtggctaatatcaatgtagtcctt-ccacacccttattttagtgtttccatgatatggctttcgtcatatcttgatggtaatctatttatatctctatatATTTGGAGCAAGATATAAAATTTAGACTTGATTTTTTAAAGATTTTTCAAGATGTAATTCTTATTTCTTTTTGTTCTATATGACATTTTCTGAGTTTCCTATATTTGAAGTTTGATTTTCTGTCACTTCTTTTAGAATATTTTTGGCAGTTATTTTGAAAAATATTTCTTTTGCTCCATTATTTTTCCCTCTTTTCTTTTTGGGATTTCAATCATAACTAGAGTAGATAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAGGGTCTCAGGAATGTAGCCTTCTCA i panPan2.chr12 C 0 C 0 s gorGor5.CYUI01000341v1 136664 761 + 150013 A-CGCAAATATTAGAAATTCTGGGTTTGTTAGAGAATATGCCATACTG-----TTTTTTTTTTTCACTTGAAAGGAAAGAGTATCTGCCATTGCAgattggatgtcttgttggtgatattgttgttcttatcttccacatgattactgagtttgtgcctagtctgtccattactaagacaaaagtgttgaagtctgcaaa------------tataattttggatttttctagttcacctttgatttctttcatgtttt-cctcatgtatttggaggttctgttgttagctgcataccctaattagtaggatgtttacatc-tcttgagaattgattattctattatctattatctctcatctctgatactatttcttgttctgaactctgttgtgtctaatatcaatgt-gtccttcccacagctttattttagtgtttccatgatatggctttctccatatcttgaagataacctatttatatctctatatatttggagcaagATATAAAATTTAGAGTTGATTTTTTAAAGATTTTTCAagatgtaattcttatttgtttttgttctatttgacattctctgagtttcctatatctgaagtttgattttctgtcacttcttttagaatatttttggcagttattttgaaaaatatttctttggctccattattttttcctcttttctttttgggatttcaattataACTAGAGTAGGTAATTTCATCTCAGTCTTATGCAGGTACTTTTTCTCAGGGTCTCAGGAATGTAGCCTTCTCA i gorGor5.CYUI01000341v1 C 0 I 1683 s nomLeu3.chr19 40170792 761 - 81552678 ACCGCAAATATTAGAAATTCTGGGTTTATTAGAGAATAGGCCATATTG------TTTTTTTTTCCACTTGAAAGGAAAGAGTATCTGCCATTGAAgattggatgtcttgttggtgatattgttgttcttatcttccatatgattactgaggttgtgcctagtctgtccattactaagacaaaagtgttgaagtttgcaaa------------tataattttggatttttctagttcacctttgatttctttcatgttttacctcatgtatttggaagttctgtcgttagctgcataccctaattagtaggatgtttacatcgtcttgagaattgattattatgttatatattatctcccatctctgatactttttcttgttctgaactctgttgcgtctagtatcaatgtagtcttt-ccacagctttattttagtgtttccatgatatggctttctccatatcttgattataacctatttatatctctatatatttggagcaagATATAAAATTTAGAGTTGATTTTTTAAAGATTTTTCAAGATGGAATTCttatttatgtttgttctatttgacattctctgagtttcctatatctgaagcttgattttctgtcacttcttttagaatatttttggcagttattttgaaaaatatttcttttgctccattatttttctctctgt--tttatgggatttcaattataACTAGGGTGGGTAATTTCATCTCAGTCTTATGCAGGTGCTTTTTCTCAGGGTCTCAGGAATGTAGCCATCTCA i nomLeu3.chr19 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e macFas5.chr3 67306146 12 + 192294377 I e canFam3.chr18 51769235 2845 - 55844845 I a score=600.000000 s hg38.chr22_KI270732v1_random 23051 1 + 41543 C s panTro5.chr2B 114768726 1 - 133216015 c i panTro5.chr2B C 0 I 1686 s panPan2.chr12 82712295 1 - 135337776 C i panPan2.chr12 C 0 C 0 s nomLeu3.chr19 40171553 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e macFas5.chr3 67306146 12 + 192294377 I e canFam3.chr18 51769235 2845 - 55844845 I e gorGor5.CYUI01000341v1 137425 1683 + 150013 I a score=573.000000 s hg38.chr22_KI270732v1_random 23052 2 + 41543 AC s panPan2.chr12 82712296 2 - 135337776 AC i panPan2.chr12 C 0 C 0 s nomLeu3.chr19 40171554 2 - 81552678 AC i nomLeu3.chr19 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e macFas5.chr3 67306146 12 + 192294377 I e canFam3.chr18 51769235 2845 - 55844845 I e panTro5.chr2B 114768727 1686 - 133216015 I e gorGor5.CYUI01000341v1 137425 1683 + 150013 I a score=2820.000000 s hg38.chr22_KI270732v1_random 23054 3 + 41543 TTC s panTro5.chr2B 114770413 3 - 133216015 ttc i panTro5.chr2B I 1686 C 0 s panPan2.chr12 82712298 3 - 135337776 TTC i panPan2.chr12 C 0 N 0 s gorGor5.CYUI01000341v1 139108 3 + 150013 ttc i gorGor5.CYUI01000341v1 I 1683 C 0 s nomLeu3.chr19 40171556 3 - 81552678 TTC i nomLeu3.chr19 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e macFas5.chr3 67306146 12 + 192294377 I e canFam3.chr18 51769235 2845 - 55844845 I a score=12233.000000 s hg38.chr22_KI270732v1_random 23057 20 + 41543 ATGCACGTGTTTATTTTTTG s panTro5.chr2B 114770416 20 - 133216015 atgcacatgtttattttttg i panTro5.chr2B C 0 C 0 s panPan2.chr7 97401720 20 - 162613886 atgcacatgtttattttctg i panPan2.chr7 N 0 C 0 s gorGor5.CYUI01000341v1 139111 20 + 150013 atgcacatgtttattttttg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40171559 13 - 81552678 -------TGTTCTTTTCCTG i nomLeu3.chr19 C 0 I 2339 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e macFas5.chr3 67306146 12 + 192294377 I e canFam3.chr18 51769235 2845 - 55844845 I a score=322677.000000 s hg38.chr22_KI270732v1_random 23077 719 + 41543 TGCACCTATGTTTTGtaagattaacagctgatttaacagaaacaatggaaggcaagaggtaggaggataatatattcaaaaaatgcaaaggaaaaaaaactgtcagccaccaattccttatccagcaattagttttcaaaaatgaagataacacaaagacttacccagagaaacagaaatattaactgaagttgttgctggcagacctaccaaacaaacaaaaaaagaaaaaacaccaaaataaattcctaaggctaaaagcaagttgcacaagacagtcatttgaatccactttttttaaaaaagcactggtataggtaaaattaacattataaaagacagtagaaacgcatgttttctgtttatcataaattgtttataaaataatatgtgtataatggccgggcacgatggctcacacctgtaatctcagcatttcaggaggctgaggcgggcgtattacgaggtcaggagatcaagagcatcctggctaacataatgaaaccccgtctttactaaaaatacaaaaaattagccgggcgtgatggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaagccaggagatggagcttgcagtgagcgaagactgtgccaccgcactccagcctgggcaacagagggggactctgtctcaatgatgatgatgataataataataataataataataat s panTro5.chr2B 114770436 685 - 133216015 aacacctAGGTTCTGtaagattaacagctgacttaacagaaacagtggaaggcaacaggcagtaaaataatatattcaaaagatgcaaaggaaaaaaaactgtcagccaccaattccttatccagcaattatttttcaaaaatgaagataacacaaagtcttacccagataaacagaaatattaactgaaggtgttgctggcagacctaccatacaaa-----aaaaaaaaaacactaaaataaattcctaaggctaaaagcaagttacacaagccagtcatttgaatccacattttttaaaaa-gcactggtataggtaatattaacattataaaagacagtagaaatccatgttttctctttatcataaattgtttataaaataatatgcgtataatggccaggcaggatggctcacacctgtaatctcagcactttgggaggccgacgtgggtgtattacgaggccaggagatagagaccatcctggctgacaca----------gtctctactaaaaatacaaaaaattagccagacgtgatggcaggtgcctgtagttccagctactccggaggctaaagcagaagaatgtcatgaagccgggagatggagcttgcagtgagcggagattgtgccactgcactccagcctgggtgacagagggagactccgtcttaatgat------------------aataataataataat i panTro5.chr2B C 0 C 0 s panPan2.chr7 97401740 682 - 162613886 agcacctatgttttGtaagattaacagctgacttaagagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaaggaaaaaaaactctcagccacgaattccttatccagcaattatttttcaaaaatgaaaataacacaaagacttagccagataatcagaaacattaactgaagttgttgctggcagacctaccatataaa---------aaaaaactctaaaataaattcctaaggctaaaagcaagttacagaagacagtcacttgaatccacatttttaaaaaa-gcactgatatacgtaatattgacattataaaagacagtaaaaatgcatttcttctctttataataaattgtttattaaataacatgtgtataatggccaggcacgatggctcacacctgtaatctcagcactttgggaggccaaggcgggcgtattacgaggccaggagatcgagaccatcctggctaacacagtgaaaccccgtttctactaaaaatacaaaaaatgagccgggcgtgatggcggacgcctgtagtcccagctacttgggaggctgaagcagaaaaatggcatgaagccgggagatggagcttgcagtgagcggagattgtgtcactgcactccagcctgggtgacagagggagactccgtctcaatgat---------------------------aataat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139131 692 + 150013 agcacctatgttttGtaagattaacagctgacttaagagaaacaatggaaggcaagaggcagtagaataatatattcaaaagatgcaaa-gaaaaaaaactgtcagccaccaattccttatccagcaattagttttcaaaaatgaagataacacaaagacttacccagagaaacagaaatattaactgaagttattgctggcagacctaccaaacaaacaaaaaaagaaaaaacaccaaaataaattcctaaggctaaaagcaagttgcacaagacagtcatttgaatccactttttttaaaaa-gcactggtataggtaaaattaacattataaaagacagtagaaatgcatgttttctgtttatcataaattgtttataaaataatatgtgtataatggccgggcacgatggctcacacctgtaatctcagcatttcgggaggctgaggcgggcatattacgaggccaggagattgagagcatcctggctaacataaggaaaccccgtctctactaaaaatacaaaaaatta-tcgggcgtgatggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaagccaggagatggagcttgcagtgagcggagactgtgccaatgcactccagtctgggcaacagagggagactccgtctcaatgat------------------------aataataat i gorGor5.CYUI01000341v1 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1897858 2155 - 9267652 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e saiBol1.JH378145 736534 2167 - 18371965 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e macFas5.chr3 67306146 12 + 192294377 I e canFam3.chr18 51769235 2845 - 55844845 I e nomLeu3.chr19 40171572 2339 - 81552678 I a score=71851.000000 s hg38.chr22_KI270732v1_random 23796 58 + 41543 aataatatatgcataatgtattgctgagtatttgacatgtagaaatgtaatatgtcta s panTro5.chr2B 114771121 58 - 133216015 aataatatgttcataatgtattgctgagtatttgacatgtagaaatgtaatatatcta i panTro5.chr2B C 0 C 0 s panPan2.chr7 97402422 58 - 162613886 aataatatgtgcataatgtattgctgagtttttgacatgtagaaatgtaatacgtcta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139823 58 + 150013 aataatatatgcataatgtattgctgagtatttgacatgcagaaatgtaatatgtcta i gorGor5.CYUI01000341v1 C 0 C 0 s saiBol1.JH378145 738701 57 - 18371965 aataat-tgtgcataatgtattgctgagtatttaacatgtagaaatgtaatatgtctg i saiBol1.JH378145 I 2167 C 0 s aotNan1.NW_018514471v1 1900013 58 - 9267652 aataatatgtgcataatgtattgctgagtatttaacatgtagaaatgtaatatgtcta i aotNan1.NW_018514471v1 I 2155 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e cebCap1.NW_016107540v1 1395961 2514 + 3566421 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e macFas5.chr3 67306146 12 + 192294377 I e canFam3.chr18 51769235 2845 - 55844845 I e nomLeu3.chr19 40171572 2339 - 81552678 I a score=50061.000000 s hg38.chr22_KI270732v1_random 23854 29 + 41543 taacatattttccagtaacatcaaaaagc s panTro5.chr2B 114771179 29 - 133216015 taacatattttccagtaacatcaaagagg i panTro5.chr2B C 0 C 0 s panPan2.chr7 97402480 29 - 162613886 taacatattttccagtaacatcaaaaagg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139881 29 + 150013 taacatattttccagtaacatcaaaaagg i gorGor5.CYUI01000341v1 C 0 C 0 s saiBol1.JH378145 738758 29 - 18371965 taacatattttccaataacatcaaaaagt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398475 29 + 3566421 taacgtattttctaataacatcaaaaagt i cebCap1.NW_016107540v1 I 2514 C 0 s aotNan1.NW_018514471v1 1900071 29 - 9267652 taacatattttccaataacatcaaaaagt i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e colAng1.NW_012115910v1 1757952 271 + 6934359 I e manLeu1.NW_012105809v1 1181095 230 - 1799296 I e chlSab2.chr21 5714004 340 + 127223203 I e cerAty1.NW_012000909v1 2508266 462 + 10077455 I e macNem1.NW_012011522v1 2787384 641 + 3123512 I e rheMac8.chr3 133476037 436 - 185818997 I e macFas5.chr3 67306146 12 + 192294377 I e canFam3.chr18 51769235 2845 - 55844845 I e nomLeu3.chr19 40171572 2339 - 81552678 I a score=39091.000000 s hg38.chr22_KI270732v1_random 23883 7 + 41543 aggtagt s panTro5.chr2B 114771208 7 - 133216015 aggtagt i panTro5.chr2B C 0 C 0 s panPan2.chr7 97402509 7 - 162613886 aggtagt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139910 7 + 150013 aggtagt i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133476473 7 - 185818997 aGGTAGC i rheMac8.chr3 I 436 C 0 s macFas5.chr3 67306158 7 + 192294377 aGGTAGC i macFas5.chr3 I 12 C 0 s macNem1.NW_012011522v1 2788025 7 + 3123512 aGGTAGC i macNem1.NW_012011522v1 I 641 C 0 s cerAty1.NW_012000909v1 2508728 7 + 10077455 aGGTAGC i cerAty1.NW_012000909v1 I 462 C 0 s manLeu1.NW_012105809v1 1181325 7 - 1799296 aGGTAGC i manLeu1.NW_012105809v1 I 230 C 0 s colAng1.NW_012115910v1 1758223 7 + 6934359 aGGTAGT i colAng1.NW_012115910v1 I 271 C 0 s saiBol1.JH378145 738787 7 - 18371965 aggtatt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398504 7 + 3566421 aggtatt i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900100 7 - 9267652 aggcatt i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e chlSab2.chr21 5714004 340 + 127223203 I e canFam3.chr18 51769235 2845 - 55844845 I e nomLeu3.chr19 40171572 2339 - 81552678 I a score=1717750.000000 s hg38.chr22_KI270732v1_random 23890 242 + 41543 tggaagaaaaatgtatcgtgataaggtaatcactctagatggtaaagtaataattactaaaatgtattgttggctttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaataaaagagatttgtataagaatgatgtttctatgtgttactaaaattttactagtataagttggaagatgatttgattaattaattttccatatacctatatggtaaactta s panTro5.chr2B 114771215 242 - 133216015 tggaagaaaaatgtattgtgataaggtaatcactctagatggtaaagtagtaattactaaaatgtattgttggctttgtaactttaatagatataatgtgtaaagtgataatactttaaaatggaggaaatataagagatttgtataagaatgatgtttctatgtattactaaaagtttactagtataaattggaagatgatttgaataattaattttccatatacctatatggtaaactta i panTro5.chr2B C 0 C 0 s panPan2.chr7 97402516 242 - 162613886 tggaagaaaaatgtattgtgataaggtaatcactctagatggtaaagtaataattactaaaatgtattgttggctttgtaactttagtagatgtaatgtgtaaagtgataatactttaaaatggaggaaataaaaaagatttatataagaatgatgtttctatgtattactaaaagtttaatattataaattggaagatgatttgaataattaattttccatatacctatatggtaaactta i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 139917 242 + 150013 tggaagaaaaatgtatcatgataaggtaatcactctagatggtaaagtaataattactaaaatatattgttggctttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaacggaggaaataaaagagatttgtataagaatgatgtttctatgtgttactgaaattttactagtataagttggaagatgatttgaataattaattttccatatacctatatggtaaactta i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133476480 241 - 185818997 TGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattatcgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaactta i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67306165 239 + 192294377 TGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac---agatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaactta i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2788032 241 + 3123512 TGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaagtaataattattcaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaac-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaactta i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2508735 241 + 10077455 TGGAAGAAAAATGTATTGTGATAAGGTAATTACTATACATGGtaaagtagtaattattaaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaaa-agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaactta i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5714344 240 + 127223203 tggaagaaaAATGTATTGTGATAAGGTAATTACTATAGATGGtaaggtaataattattaaaatgtattgttgattttgtaactttaatagatgtaatgtgtaaagtgataatattttaaaatggaggaaaaa--agagatttgtataagaatgatgtttctatgtattactaaaattcagttagtacaaattggaagtttatttgaataattaattttccatatacctgtatggttaactta i chlSab2.chr21 I 340 C 0 s manLeu1.NW_012105809v1 1181332 237 - 1799296 TGGAAGAAAAATGCATTGTGGTAAGGTAATTACTATAGATGGtaaagtaataattattaaaatgtattattgattttgtaactttaatagatgtaatatgtaaagtgatagtactttaaaatggaggaaaa-----agacttgtataagaatgatgtttctatgtattactaaaattcagttcgtacaaattggaagttgatttgaataattaattttccatatacctgtatggtaaactta i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1758230 238 + 6934359 TGGAAGAAAAATGTATTGTGATAAGGTAATTACTATAGATGGtaaggtaataattattaaaatgtattattgattttgtaactttaatagatgtaatgtgtaaagtgataatactttaaaatggaggaaaaa----agatttgtataagaatggtgtttctatgtgttactaaaattcagttagtacaaattggaagttgatttgaataattaattttccatatacctgtatggcaaactta i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 738794 239 - 18371965 tggaagaaaattgcattgtgataagataattactatagatggtaaagtaatcattattaaactgtattgttggttttgtaactttaatagatgtaatgtataaagtgacggtcctttaaaatggatgaaataaaagacacttgtatgag---aatgtttctatgtgttactaaagtttagctagtataaattggaagttgatttgaataattaattttccatatacctatagggtaaacttg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398511 242 + 3566421 tggaagaaaattgtattgtgataaggtaattactatagatggtaaagtaatcatcattaaactgtattgttggctttgtaactttaatagatgtaatgtataaagtgatgatactttaaaatggatgaaataaaagagacttgtatgagaataatgtttccatgtattattaaaatttagctagtataaattggaagtttatttgaataattaattttccatatacctatagggtaaactta i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900107 237 - 9267652 tggaagaaaattgtattgtgataaggtaattactatagatagtaaagtcataattgttaaaatgtattgttggctttgtaactttaatagatgta----ataaagtgacaatactttaaaatggat-aaataaaagagacttgtataagaataatgtttctatgtattactaaaatttagctagtataaattggaagttgatttgaataattaattttccatatacctatatggtaaactta i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e canFam3.chr18 51769235 2845 - 55844845 I e nomLeu3.chr19 40171572 2339 - 81552678 I a score=10416458.000000 s hg38.chr22_KI270732v1_random 24132 1259 + 41543 caacaacaacaaaaattctcaaaaatat------------atagtaaaataattcattagtaatctaaagttccctatttcagaaaatattcattcattgcaaaataaagcaataaagataaatatttgagaaatatacaaaacaaactgtaaaatggcagacataaacagaattataccaattataatattaaatgtgaacagattaa--aatccaatcaagagggagagattgtcagactggattaaaacaagtgatcacaatatacgc-------------------tgagatgcaaggatattaaatgggttgaaagtaaaaagatgacaaaaaatatcatgcaaagggcaatcataagaacactgaactcattatactcataagacacaacatagactattaaaaatgtgaataggattttaaaattttatactgtagtaagaagggggtcaacgctttaggaagacatagctattacaatcatgtatgc-acAGAtaggagctaaattgtttcctctatatagatgctgaaatcctaaccactgaatatgacctcatgaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagcctgaattccatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaaaccaccagaagctagacacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacacctcaagctcagatttttagcttccaggactataagactataaatgtatgttgttcaaggcacccagtttgtgttacttggttatggcagccctataaaactaatacaTGAACTAATAACAAAGCATAACAATGTGAAGCAAAAATTGACAAAAGAGGAGCatcagcaaaatggcagtggagacagctgcaatatttcatttccccacagaaacatc--acacaactaagagaaactgtccgaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccgagtgatagtggactcaagaaaaagacaactggaaaactttatgaca-tttttaacttgcctttgccccagcaaattggcagttttgaggtgtcagaagcccacgttcccagtgagaaaccctgg-tccatga-tccaaaggaacaagagaagatcttactcgcaaattattatg--tgtctgttctgactg s panTro5.chr2B 114771457 1258 - 133216015 caactacaacaaaaattcccaaaaatat------------atactaaaataattcattagtaatctaaagttccgtattttagaaaatattcattcattgcaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaacggtaaaatggcagacataaatagaattataccaattataatattaaatgtgagcagattaa--aatccattcaagaggcagagattctcagactggattaaaacaagtgatcccaatatatgc-------------------tgagatgcaaggatactaa-tggattgaaagtaaaaagacgacaaaaaatatcatgcaaagagcaatcataagaacactgaactcattatactcataacacacgatatagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggagtcagcacttttggaagacatagctattacaatcatgtatgc-acaaatatgagctaaattgttttgtctatatagacgctgaaatcctaaccactgaatatgacctcattaggaaataggttctttgcaggtgattaagttaagataaaatcagatgagcctgaattcaatatga-------------------------ctgatgtccttataaaaagaagaaaattgagtagagggagacatacacacagggagagtaccatatgattatgagggcagagattagccaagaaatgccaaagactgccactaaaccaccagaagctagaaacaaggcacagaacagactttctctcatagcccttgaagggaccatccctgctgacacctcagtctcagacttttagcttccaggactataagactataaatttgtgttgttcaaggcacccagtttgtgttacttggttatggcagccctagaaaactaatacatgaactaataacaaagcataagaacatgaagcaaaaattgacaaaagaggagcatcagcaaaatggcagtggagacaactgcaatctttcacttccccacagaaacatc--acacaactaagagaaactgtccgaataagctttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcagactcaagaacaagacaacttgaaaattttttgacg-tttttaacttgcctttgccccagcaaattggctgttttgaagtgtcagaagcccacgtttccagtgaggaaccctgg-tccattg-tccaaaggaacaagagaagattttacccgcaaattattatg--tgtctgttctgactg i panTro5.chr2B C 0 C 0 s panPan2.chr7 97402758 1255 - 162613886 caacaacaataaaaagtctcaaaaatat------------ataataaaataattcattagtaatctaaagttccctattttaaaaaatattcttgcattgcaaaataaagcaataaagaaaaatatttg-gtaatatataaaacaaacggtaaaatggcagacataaatagaattataccaattataatcttaaatgtgagcagattaa--aatccattccagaggcagagattgtcagactggattaaaacaagtgatcccaatatacgc-------------------tgagatgcaaggatactaa-cggattgaaagtaaaaagatgacaaaaaatatcatgcaaagagcaatcataagaacactgaactcattatactcataacacacaatatagactattacaaatgtgaataggattttaaaa-tttatattgtagtaa-aagggggtcaacgctttaggaagacatagctattacaatcatgtatgc-acAGAtaggagctaaattgtttcctctatatagatgctgaaattctaaccactgaatatgacctcattaggaaataggttgtttgcagctgatcaagttaagatacaatcagatgagcctgaattcaatatga-------------------------ctgatgtccttgtgaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaaaccaccagaagcgagaaacaaggcacagaacaggctttctctcatagcccctgaagggaccatccctgctgacacctcaatctcagacttttagcttccaggactgtaagactataaatgtatgcttctcaaggcacccagtttgtgttacttggttatggcagccctagaaaactaatacaTGAACTAATAACAAAGCATAATAACATGAAGCAAAAATTGACAAAAGAGGAGCatcagcaaaatggcagtggagacagctgcaatctatcatttccccacagaaacatc--acacaactaagagaaactgtcggaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcagactcaagaaaaagacaactggaaaactttaccaca-tttttaacttgtctttgccccagcaaattggcagttttgaagtttcagaagcccacgttcccagtgaggaagcctgg-tccatgg-tccaaaggaacaagagaagatcttacccgcaaattattatg--tgtctgttctgactg i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 140159 1256 + 150013 caacaacaacaaaaattctcaaaaatat------------atagtaaaataattcattagtaatctaaagttccctattttagaaaatattcattcattgcaaaataaagcaataaagataaatatttgagaaatatacaaaacaaacggtaaaatggcagacataaacagaattataccaattataatattaaatgtgaacagattaa--aatccaatcaagaggcagagattgtcagactggattaaaacaagtgatcccaatatacgc-------------------tgagatgcaaggatactga-tgggttgaaagtaaaaagacgacaaaaaa-atcatgcaaagggcaatcataagaacactgaactcattatactcataacacacaatatagactattaaaaatgtgaataggattttaaaaatttatactgtagtaagaagggtgtcaacgctttaggaagacatagctattacaatcatgtatgc-acagatatgagctaaattgtttcctctatatagatgctgaaatcctaaccactgaatatgacctcatgaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagcctgaattcaatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaagccaccagaagctagacacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacacctcaagctcagatttctagcttccaggactataagactataaatgtatgttgttcaaggcacccagtttgtgttagttggttatgggagccctagaaaactaatacatgaactaataacaaagcataataacatgaagcaaaaattgacaaaaGAGGAGCatcagcaaaa-agcagtggagacagctgcaatctttcatttccccacagaaacatc--acacaactaagagaaactgtccgaataaactttgccaaaactctggaaaatggtcaaaagattacaacaaccgagtgaaagcagactcaagaaaaagacaactggaaaactttatgaca-tttttaacttggctttgccccagcaaattggcagttttgaagtgtcagaagcccatgttcccagtgaggaaccctgg-tccgtgg-tccaaaggaacaagagaagatcttacccgcaaattattatg--tgtctgttctgactg i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40173911 1271 - 81552678 caaaaaaaaaaaaaaTTCTCAaaaatatatagtaaaatacatagtaaaataattcattagtaatctaaagttccctattttagaaaatattcattcattgcaaaataaatcaataaagaaaaatatttgagaaatatacaaaacaaatggttaaatggcagacatgaatagaattataccaattataatattaaatgtgagcagattaa--aatccaatcaagaggcagagattgtcagactggattaaaacaagagatcccaatatacgc-------------------tgagatgcaaggatacaaa-tggattgaaagtaaaaagatgacaaaaaatatcatgcaaagagcaatcataagaacactgaactcattatactcataacacacaatatagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaatgctttaggaagacatagctattacaatcatgcatgc-acagatatgagctaaattgtttcctctatacagatgctgaaatcctaaccgctgaatatgacctcattaggaaataggttctttgcagatgatcaagttaagataaaatcagatgagccttaattcaatatga-------------------------ctgatgtccttacaaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgaaggcagagattagctaaggaatgccaaagactgccactaaaccaccagaagctagaaacaaggcacagaacaggctttctctcataccccttgaagggaccatccctgctgacacctcaatctcagacttttagctttcaggactataagactataaatttatgttgttcaaggcactcagtttgtgttacttggttatggtagccctagaaaactaatacatgaactaataacaaatcataataacatgaggcaaaaattgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaatatc--acacaactaagagaaactgtcagaataaatgttgccaaaactctggaaaatggtcaaaagattacaacaaccaagtgaaagcaaactcaagagaaagacaacttgaaaactttatgacattttttaacttgcatttgccccagcaaattggcagtgttgaagtgtcagaagcccatgttcccagtgaggaaccctgg-tccatgg-tccaaaggaacaagagaagatcttagccgcaaattattatg--tgtctgttctgactg i nomLeu3.chr19 I 2339 C 0 s rheMac8.chr3 133476721 1280 - 185818997 caatgacaac-aaaattctcaaaaatat------------atagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatacgctgtctagagaaggcacatttgagatgcaaggatactaa-tggattgaaagtaaaaagatgacaaaaaatatcatgcaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttatacaaagaagaaatttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgcctcaatctcaaacttttagcttccaagactataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaaataataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctacaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaactttaaaactttatgaca-tttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactg i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67306404 1280 + 192294377 caatgacaac-aaaattctccaaaatat------------ataataaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatacgctgtctagagaaggcacatttgagatgcaaggatactaa-tggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttatacaaagaagaaatttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgcctcaatctcaaacttttagcttccaagactataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaactaataacagagtataataacacgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaactttaaaactttatgaca-tttttaatttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactg i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2788273 1280 + 3123512 caatgacaac-aaaattctcaaaaatat------------atagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaagtgacagacataaatagaataataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatacgctgtctagagaaggcacatttgagatgcaaggatactaa-tggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcctaatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctatatagatgctgaaatcctaacctctgaatatgaccttattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatgg-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacacacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgatgcctcaatctcaaacttttagcttccaagactataagacaataaatttatcttgttcaaggcacccagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgaca-tttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactg i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2508976 1278 + 10077455 caatgacaacaaaaattctcaaaaatat------------atagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatggaattataccaattataatattatatgtgagcagattaaataatccaatc--gaggtacagatggtcagactggattaaaacaagtgatcccaatatatgctgcctagagaaggcacatttgagatgcaaggatactaa-t-gattgaaagtaaaaagatgacaaaaaatatcataaaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttgtattgtagtaataaggggatcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctgtatagatgctgaaatcttaacctctgaatatgacctcattaggaagtaggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattttgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacgcctcaatctcagacttttagcttccaggactataagacaataaatttatgttgttcaaggcactcagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgtcagaatgaactttaccaaaactctggaaaatggtgaaaagatgacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgaca-tttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactg i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5714584 1272 + 127223203 caacgacaacaaaaatcctcaaaaatat------------atagtacaataattcattagtaaactaaagttctctattttagaaaat----attcattgcaaaataaagcaataaagaaaaatatttgagaaatacaccaaacaa----taaaatgacagacataaatagaattataccaattataatattatatgtaagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatacgctgtctagagaaggcacatttgagatgcaaggatactaa-tggattgaaagtaaaaagatgacaaaaaatatcatacaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttatattgtagtaataagggagtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctacatagatgctgaaatcctaatctctgaatatgccctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ccgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattatgagggcagagattagccaaggaatgccaaagactgccactaaacccccagaagctagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgac-cctcaatctcagacttttagcatccaggactataagataataaatttatgttattcaaggcacccagtttgtg-tacttggttaaggcagccctagaaagctaatacatgaactaataacagaatataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactaccagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgaca-tttttaacttgcctgtgccccagcaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggagaagatcttacctgcaaattattatgtatgtctgttctgactg i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1181569 1280 - 1799296 caatgacaacaaaaattctcaaaaatat------------atagtaaaataattcattagtaaactaaagttctctattttagaaaatactcattcattgcaaaataaagcaacaaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaattataccaattataatattatatgtgagcagattaaataatccaatcaagaggtagagatggtcagactggattaaaacaagtgatcccaatatatgctgtctagagaaggcacatttgagatgcaaggatactaa-t-gattgaaagtaaaaagatgacaaaaaatatcataaaaagagcaaccataagaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggattttaaaaatttgtattgtagtaataagggggtcaactcttcaggaagacatagctattacaatcatatatgc-actggtatgagctaaattgtttcctctacataggtgctgaaatcttaacctctgaatatgacctcattaggaaataggttctttgcaggtaatcaagttaagataaaatcagatgagccttaatccaatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacagggagagtaccatgtgattttgagggcagagattagccaaggaatgccaaagactgccattaaaccaccagaaactagaaacaaggcatagaacagactttctctcatagcccttgaagggaccatccctgctgacgcctcaatctcagacttttagcttccaggactataagacaataaatttatgttgttcaaggcacccagtttgtg-tacttggttgaggcagccctagaaagctaatacatgaactaataacagagtataataacatgaagcaaaaaatgacaaaaGAGGAGCatcagcaaaatggcagtggaaacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgtcagaatgaactttaccaaaactctggaaaatggtgaaaagattacaacaatcaagtgaaagtagactcaagtaaaagacaacttgaaaactttatgaca-tttttaacttgcctgtgccccaccaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaacactgg-tccatggctccaaaggaacaggggaagatcttacctgcaaattattatatatgtctgttctgactg i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1758468 1261 + 6934359 caatgacaacaaaaattctcaaaaatgt------------atagtaaaataattcattagtaaactaaagttctctattttagaaaacactcattcactgcaaaataaagcaattaagaaaaatatttgagaaatacaccaaacaaacagtaaaatgacagacataaatagaattataccaattataatattatatgtgagcagattaaataatccagtcaagaggtagagatggtcagactggattaaaacaagtgatcccaatataagctgtctagagaaggcacatttgagatgcaaggatactag-tggattgaaagtaaaaagatgacaaaagatatcatacaaagagcaaccataaaaacactgaactcattatactcataatacacaatacagactattaaaaatgtgaataggatttttaaaatttgtattgtaataataaaggggtcaactcttcaggaagacatagctattacaatcatatatgc-actgatatgagctaaattgtttcctctacatagatgctgaaatcctaacctctgaatatgacctcattaggaaataggttctttgcaggtgatcaagttaagataaaatcaaatgagccttaattcaatatga-------------------------ctgatgtccttataaaaagaagaaatttgagtagagggagacatacacacat-----gtaccatgtgattatgagggcagagattagccaaggaatgccgaagactgccattaaaccaccagaagctagaaacaaggcatagaaca-actttctctcatagcccttgaagggaccatccctgctgacacctcaatctcagacttttagcttctaggactataagacaataaatttatgttgttcaaggcacctagtttgtg-tacttggttaaggcagccctagaaagctaat-------------acagagtttaataacacgaagcaaaaaatgacgaaaGAGGAGCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatc--aaacaactaaaagaaactgccagaataaactttaccaaaactctggaaaatggtgaaaagattacaacaaccaagtgaaagtagactcaagt-aaagacaacttgaaaactttatgaca-tttttaacttgcctgtgccccagcaaattggcagttttgaagtgtcagaagcccacgttcccagtgtggaaccctgg-tccatggctccagaggaacaagagaagatcttacccgcaaattattatgtatgtctcttctgactg i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 739033 1276 - 18371965 caac-acaac-aaaactctcaaaaatat------------atagtaaaataagtcattgggaaactaaagttc--tgttttagaaaatattcatttattgcaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaatagtagaatggcagacataaatagaattgtaccaattattatattaaatgtgagcagattaagcaacccaatcaagaggcagagattgtcagactgaattaaaacaagggatcccaatataggctgtctagagaaggcaaattcgggatgcaaagatactaa-caaattgaaagtaaaaagatgacaagacatattatgcaagcagcaaccataagaacactgaacccattatactcatagcacacaatgtagactattgaaaatgtgaatagagttttaaaaatttatattgtagtcataagggggtcaactctttaggaagac-------------------atgc-actgatatgagctacattgcttcccctctgaagatgctgaaatactaacctctgaatatgacctcattaggaaatacattttctgcatatgatcaggttaagataaaatcagacgagctttaattcaatatgattgatgtcttattaaaagaagaaatttgatgt-cttattaaaagaagaaatttgagtaaagggagacatacacatagggagagcaccatgtgattatgaaggcagagataagccaaggaatgccaacgactaccactaaatcaccagaagctagaaacaaggcatagaacagactgtctctcatagccctt-aaggtaccatacctgctggcccctcagtctcagacttttagcttccaggactgtaagacaa-aaatttatgttgttcaaggcacccagtttgtgttgtttggttatggcagccctagaaaactaatacattaactaataacagagtataataaaatgaagcaaacattgac-----agaaCCGTCATCaaaatggcagtggagacagcttcaatctttcatttcaccacagaaacatc--aaaaaactaaaagaaactgtcagaataaactttgtcaaaactctggaaaatagtgaaaatattacaacaaccaagtgaaagcagactcaagaaaaagacaacttgaaaactttatgaca-tttttaacttgcctatgcctcgctgaagtggcagttttgaagggtcagaagcctacattccccatgtggaaccctgg-tccatggttccaatggaataagagacgatcttactggaaaatgattatatatgtttgttccaactg i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1398753 1255 + 3566421 caacaacaac-aaaactctcaaaaatat------------atagtaaaataattcattgggaaactaaagttc--tattttagaaaatattcatttattacaaaataaagcaataaagaaaaatatttgagaaatatacaaaacaaacagtaaaatggcagacataaatagaattgtaccaattattatattaaatgtgagcagattaaacaacccaatcaagaggcagagattgtcggattgatttaaaataagtgatcccaatataggctgtctagagaaggcaaattcgggatgcaaagatactaa-cagcttgaaagtaaaaagatgacaagacatattatgcaagcagcaaccataagaacactgaacccattatactcatagcacacaatgtaggctattgaaaatgtgaatagagttttaaaaatttatattgtagtaataagggggtcaagtctttaggaaaac-------------------atgc-actgatatgagctatattg-tttccctctgaagatgctgaaatcctaacctctgaatatgacctcattaggaaatacgttttttgcagactatcaagttaagataaaatcagatgagccttaattcaatatga-------------------------ttgatgt-cttattaaaagaagaaatttgagtaaagggagacatacacatagggagagcaccatgtgattatgaaggcagagattagccaaggaatgccaaaaactgcctctaaatcaccagaagctagaaacaaagcatagaacagactgtctctcatagcccttgaagggaccatccctgctgacacctcagtctcagacttttagcttccaggactgtaagacaa-aaatttatgttgttctaggcactcagtttgtgttgcttggttatggcagccctagaaaactaatacatgaactaacaacagagtataataacatgaagaaaaaattgac-----agaaCCatcagcaaaatggcagtggagacagctgcaatctttcatttccccacagaaacatcaaaaaaaactaaaagaaactgtcagaataaactttgtcaaaactctggaaaatagtgaaaatattacaacaaccaagtgaaataagactcaagaaaaagacaacttgaaaacttcatgaca-tttttaacttgcctatgcctcactgaagtggtagttttgaagtgtcagaagcctacattccccatgtggaaccctggttccatggttccaatggaataagagaagatcttactggaaaatgattatatatgtttgttctaactg i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1900344 1255 - 9267652 caacaacaacaaaaactctcaaaaatat------------atagtaaaataattcattgggaaactaaagttc--tattttagaaaatattcatttattacaaaataaagcaataaagaaaactatttgagaaatatacaaaacaaacagtaaaatggtagacatgaatagaattgtaccaattattatattaaatgtgagcagattaaacaacccaatcaagaggcagagattgtcagactcaattaaaacaagtgatcccagtataggctgtctagagaaggcaaattcgggatgcaaagatactaa-cagattgaaagtaaaaagatgacaagacatattatgcaagcagcaaccatatgaacactgaacccattatactcatagcacacaatgtagactattgaaaatgtgaatagagttttaaaaatttatattgtagtaataagggggtcaactctttaggaagac-------------------atGCTAGtgatatgagctacattgtttcccctccaaagatgctgaaatcctaacctccgaatatgacctcattaggaaatatgttttttgcagatgatcaagttaagataaaatcagacgagctttaattcaatatga-------------------------tcgatgt-cttattaaaagaagaaatttgagtaaagggagacatacacatagagagagcatcatgtgattatgaaggcagagattagccaaggaatgccaaaggctgccactaaatcaccagaagctagaaacaaggcatagaacagactgtctctcatagcccttgaagggaccatccctgctgacacctcagtctcagacttttagcttccaggactgtaagacaa-aaatttatgttgtttaaggcacccagtttgtgttgcttggttatggcagccctagaaaactaacacaTGAACTAATAACAGAGTATAATAACATGAAACAAAAGTTCAC-----AGAACCatcagcaaaatggcagtgaagacagctgcaatctttcatttccccacagaaacatc--aaaaaactaaaagaaaccgtcagaataaacttcgtcaagactctggaaaatagtgaaaatattacaacaaccaagtgaaagcagactcaagaaaaagacaacttgaaaactttatgaca-tttttaacttgcctatgcctcactgaagtggcagttttgaagtgtcagaagcctacgttccccatgtggaaccctgg-tccgtggttccaatggaataagagacgatcttactggaaaatgattatatatgtttgttctaactg i aotNan1.NW_018514471v1 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e canFam3.chr18 51769235 2845 - 55844845 I a score=3928375.000000 s hg38.chr22_KI270732v1_random 25391 481 + 41543 gtctgggggatacctaaaggactaatgaaaggct--tttttttttttttctgtgttgctagaatacagaacagataaggaatggacattattaagaaactctgcaaggatacctaacaaaccagagactcttagggcaaaaattaga-gtttacacatatagtagatcaccttcagcacaggaagaaaagt-tggagaagagtat---ttggaaaactaagacattcaaaatcattcacgtacatgggacagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaatgtcataagaagaccctacacttttacctt--ggctgatccctcccctcagtgcaggctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtgtcggctttaaagaacccagcacaaagccagtctgcatggcctaga-gacatattttgctggataatgattacttgttt s panTro5.chr2B 114772715 464 - 133216015 gtctgggggatacctaaaggactaatgaaaggct--ttttttgt-----gtgtgttgctagaatacagaacagataaggaatggacattattaagaaactctacaaggagatctaacaagccacagatgcttagggcaaaaattaga-gtttacacatatagtagatcaccttccccacaggaagaaaagt-tggagaagagtat---atggaaaactaagacattcaaaattgttcacgtacatgggagagtctagaaagtcacatgtatgcatacgttaagccacatgctgacaaatgtcataagaagaccc-acacttttacctt--cgctgatccctcccctcagtgcagg-----------agtgaacttgaacttcactcagtgcaagagtgaacacacactttgtgtcggctttaaagaacccagcacaaagccagtctgcatggcctaga-gacctattttgctggataatgattacttgttt i panTro5.chr2B C 0 C 0 s panPan2.chr7 97404013 475 - 162613886 gtctgggggatacctaaaggactcatgaaaggct--tcttttt------ctgtgttgcttgaatacagaacagataaggaatggacattattaagaatctctgcaaggagacttaacaaaccacagatgcttagggcaaaaattaaa-gtttacacatatagtagatcaccttcagcacagcaagaaaagg-tggagaagagtat---ttcaaaaactaagacatacaaaatcattcatgtacatgggagagtctagaaagtcacatgtattcataggttaagccacatgctgacaaatgtcataagaagaccctacactttcacctt--ggccgatccctcccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtgcctgctttaaagaatgcagcacaaagccagtctgcatggcctaga-gacatattttgctggacaatgattacttgttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141415 480 + 150013 gtctgggggatacctaaaggactcatgaaaggct--tttttttttttt-ctgtgttgctagaatacagaacagataaggaatggacattatcaagaaactctgcaaggagacctaacaaaccacggatgcttagggcaaaaattaga-gtttacacatatagtagatcaccctcagcacaggaagaaaagt-tggagaagagtat---ttggaaaactaagacattcaaaatcattcacgtacatgggagagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaatgtcataagaagaccctacacttttacctt--ggccgatccctcccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttgtgccggctttaaagaacccagcacaaagccagtctgcatggcctaga-gacatattttgctggataatgattacttgttt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40175182 477 - 81552678 gtctgggggacacctaaaggactaatgagaggct--ttttttttt----ctgtgttgctagaatacagaacagataaggaatggacattattaagaaactctgcaaggagacctaacaaagtacagatgcttagggaaaaaactaga-gtttatacatatagtagatcatcatcagcagaggaagaaaagt-tggagaagagtat---ttggaaaactaagacatccaaaatcattcacgtacatgggagagtctagaaagtcacatatatgcataggttaagccacatgctgacaaatgtcataagaagaccctacacttttacttt--ggctgatccctccactaagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgtactcacactttgtgccggctttaaagaacccagcacaaagccagtgtgcatggcctaga-gacatattttgctggataatgattacttgttt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133478001 475 - 185818997 gtctgggagatacctaaaagactaatgaaaggca--ttttttt------ctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattaga-gtttacacatataatagatcaccttcagcacgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagactctacacttttacctt--ggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagcgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgtgtggcctaga-cacatattttgctggctaatgattacttgttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67307684 475 + 192294377 gtctgggagatacctaaaagactaatgaaaggca--ttttttt------ctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattaga-gtttacacatataatagatcaccttcagcacgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagactctacacttttacctt--ggctgatccctaccctcagtgcaagTTCTGTGCAAGAGTGAACTTGAACTTCACTCAGTGCAAGAGCGAACACACACTTTCTGCCAGCTTCAAAGGGCCCAGCACAAAGCCAGTCTGTGTGGCCTAGA-CACATATTTTGCTGGCTAATGATTACTTGTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2789553 475 + 3123512 gtctgggagatacctaaaagactaatgaaaggca--ttttttt------ctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattaga-gtttacacatataatagatcaccttcagcacgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccaccagctgacaaatgtcataagaagactctacacttttacctt--ggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagcgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgcgtggcctaga-cacatattttgctggctaatgattacttgttt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510254 475 + 10077455 gtctgggagatacctaaaagactaatgaaaggca--ttttttt------ctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattaga-gtttacacatatagtagatcaccttcagcatgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagaccctacacttttacctt--ggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttctgccagcttcaaagggcccagcacaaagccagtctgcgtggcctaga-cacatattttgctggctaatgattacttgttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5715856 475 + 127223203 gtctgggagatacctaaaagactaacgaaaggca--ttttttt------ctgtgttgctagaatgcagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattaga-gtttacgcatacagtagatcacctgcagcacgggaagaaaagt-tggagaggagtat---ttgcaaaattaagacattcaaaatcattcacgtacatgggagagtctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcgtaagaagaccctacacttttacctt--ggctgatccctaccctcagtgcaagcTCTGTGCAAGAGTGAACTTGAACTTCACTCAGTGCAAGAGTGAACACACACTTTTCGCCAGCTTCAAAGGGCCCAGCACAAAGCCAGTCTGTGTGGCCTAGA-CACATACTTTGCTGGCTAATGATTACTtgttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1182849 475 - 1799296 gtctgggagatacctaaaagactaatgaaaggca--ttttttt------ctgtgttgctagaatgtagaacagataaggaatggacataatgaagagactctgcaaagagacctaacaaactacagatccttagggcaaaaattaga-gtttacacatacagtagatcaccttcagcatgggaagaaaagt-tggagaggagtat---ttggaaaattaagacattcaaaatcattcacgtacatgggagagcctagaaagtcacatgtatgcataggttaagccacaagctgacaaatgtcataagaagaccctacacttttacctt--ggctgatccctaccctcagtgcaagttctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacactttctaccagcttcaaagggcccagcacaaagccagtctgcgtggcctaga-cacatattttgctggctaatgattacttgttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1759729 477 + 6934359 gtctgggagatacctaaaagactaatgagaagcattttttttt------ctgtgttgctagaatgcagaacagataaggaatggacataatgaagaaactctgcaaagagacctaacaaactacagatccttagggcaaaaattaga-gtttccacatatagtagatcaccttcagcatgggaagaaaagt-tggagaggaatat---ttggaaaattaagacatttaaaatcattcccgtaaatgggagagtctagaaagtcacatgtatgcataggttaagccacatgctgacaaacgtcgttagaagaccctacacttttacctt--ggctgatccctaccctcagtgcaagctctgtgcaagagtgaacttgaacttcactcagtgcaagagtgaacacacgctttctgccagcttcagagagcccagcacaaagccagtctgcgtggcttaga-cacatattttgctggctaatgattacttgttt i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740309 455 - 18371965 gtctgggggatacctaaaggactaatgagaggca--attttat------ctgtgctgctagaattcaaaatagataagaaatggacatttttcagaaactgtgcaaggagatccaacaaattacagattcttaggggaaaaattaga-gtttacacatgcagtagatcaacttcagcacaggaagaaaagt-tggagaagagtat---ttggaaaattaagacactcaaaatcattcacgtgcataggagagtttagaaattcacatgtatgcacaggttaagccacgagctgacaaatgtcctaaaaggaccctacacttttatctt--ggctgattcctaccctcagtgcaagttcagcataata------------ttca--------aagagtgaacacacatgctgtgccaggttcagacagccctgcacaaagccagtctacctggcctaga-gatatatttttctggataatgtttacttgttt i saiBol1.JH378145 C 0 I 1 s cebCap1.NW_016107540v1 1400008 455 + 3566421 gtctgggggatacataaagcactaacgaaaggca--attttct------ctgtgttgctagaattcaaaatagataaggaatggacattattcagaaactgtgcaaggagatccaacaaattacagattcttaggggaaaaattaga-gtttacacatacagtagatcaacttcagcacagaaagaaaagt-tgaagaatagtat---ttggaaaattaagacattcaaaatcattcatgtgcatgggagagtttagaaagtcacacatatgcataggttaagccacaagctgacaaatgtcctaagaggaccctacacttttatctt--ggctgattcctatcttcagtgcaagctcagcataata------------ttca--------aagagtgaacacacacactgtgccaggttcagacagcccagcacaaagccagtctgcctggcctaga-gatatattttgctggataatgtttacttgttt i cebCap1.NW_016107540v1 C 0 I 34 s aotNan1.NW_018514471v1 1901599 455 - 9267652 gtctgggggatacctaaagcactaatgaaaggca--attttat------ctgtgttgctagaattcaaaatagataaggaatggacattattcagagactatgcaaggagagccaacaaattacagattcttagggaaaaaactaga-gtttacacatacagtagatcatcttcagcacaggaagaaaagt-tggagaagagtat---ttggaaaattaagacattcaaaatcattcatgtgcataggagagtttagaaattcacatgtatgcataggttaagccacaagctgacaaatgtcctaagaggaccctacacttttatctt--ggctgattcctaccctcagtgcaagctcagcataata------------ttca--------aagagtgaagacacacactgtgccaggttcagacagcccagcacaaagccagtctgcctggcgtaga-gatatattttgctggataatgtttacttgttt i aotNan1.NW_018514471v1 C 0 I 1 s canFam3.chr18 51772080 399 - 55844845 gtctgggggctacacaaa-gagtgatgcaaaaca--ttcatct------ctgtgttgcctgaattcaggccaaagaagg-gcaaacattgttcaaaagctc--caaggagacttactca-------atacctgggtcagaagtttgaggttgagatattcagcagagaatctct--cactagagaaaatgcatggcagaaaatattcattgagaacttagcacaccccaaagcactcatatatatgcg-----------------gtgcatatata---taggctacgtgctcacaagtgactcataaagaccctatgcttccagccttgggctggcctgcagactcaatgcaagc--------aaaacaaagttga--------------aagagt--------actgt--------------------aacgcaga-ccaatctacaaagaccggaggatgtattttgttttgttatttttgcttgttt i canFam3.chr18 I 2845 C 0 e calJac3.chr8 108119180 5010 - 128169293 I a score=68165.000000 s hg38.chr22_KI270732v1_random 25872 10 + 41543 ttctttgt----tt s panTro5.chr2B 114773179 14 - 133216015 ttctttctgttttt i panTro5.chr2B C 0 C 0 s panPan2.chr7 97404488 14 - 162613886 ttctttttgttttt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141895 12 + 150013 ttctttgt--tttt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40175659 14 - 81552678 ttctttttgtttct i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133478476 14 - 185818997 ttctttttgttttt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308159 14 + 192294377 TTCTTTTTGTTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790028 14 + 3123512 ttctttttgttttt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510729 14 + 10077455 ttctttttgttttt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716331 14 + 127223203 ttctttttgttttt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183324 14 - 1799296 ttctttttgttttt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760206 14 + 6934359 ttctttttgttttt i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740765 10 - 18371965 ttctttgtgt---- i saiBol1.JH378145 I 1 I 7 s aotNan1.NW_018514471v1 1902055 10 - 9267652 ttctttgtgt---- i aotNan1.NW_018514471v1 I 1 I 23 s canFam3.chr18 51772479 11 - 55844845 -tatttttgttt-- i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e cebCap1.NW_016107540v1 1400463 34 + 3566421 I a score=127976.000000 s hg38.chr22_KI270732v1_random 25882 26 + 41543 --gttgtatttgcc--tgtttgcttaattc s panTro5.chr2B 114773193 26 - 133216015 --gttgtatttgcc--tgtttgcttagttc i panTro5.chr2B C 0 C 0 s panPan2.chr7 97404502 26 - 162613886 --cttgtatttgcc--tgtttgattggttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141907 26 + 150013 --gttgtatttgcc--tgtttgcttaattc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40175673 26 - 81552678 --gttgtatttgcc--tattttcttagttc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133478490 28 - 185818997 --gctgtgtttacctgtgtttgcttagttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308173 28 + 192294377 --GCTGTGTTTACCTGTGTTTGCTTAGTTC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790042 28 + 3123512 --gctgtgtttacctgtgtttacttagttc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510743 28 + 10077455 --gctgtgtttacctgtgtttgcttagttc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716345 28 + 127223203 --gctgtgtttgtctgtgtttgcttagttc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183338 28 - 1799296 --gctgtgtttacctgtgtttgcttagttc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760220 28 + 6934359 --gctgtgtttgcctgtgtttgcttagttc i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740782 16 - 18371965 --gttgtatttgacagtg------------ i saiBol1.JH378145 I 7 C 0 s canFam3.chr18 51772490 29 - 55844845 ttgttgtatatatgtttgtttg-ttagctc i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e aotNan1.NW_018514471v1 1902065 23 - 9267652 I e cebCap1.NW_016107540v1 1400463 34 + 3566421 I a score=34156.000000 s hg38.chr22_KI270732v1_random 25908 7 + 41543 ctgacat s panTro5.chr2B 114773219 7 - 133216015 ctgacat i panTro5.chr2B C 0 C 0 s panPan2.chr7 97404528 7 - 162613886 ctgacat i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141933 7 + 150013 ctgacat i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40175699 7 - 81552678 ctgacgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133478518 7 - 185818997 ctgatat i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308201 7 + 192294377 CTGATAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790070 7 + 3123512 ctgatat i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510771 7 + 10077455 ctgatat i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716373 7 + 127223203 ctaatat i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183366 7 - 1799296 ctgatat i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760248 7 + 6934359 ctgatac i colAng1.NW_012115910v1 C 0 C 0 s aotNan1.NW_018514471v1 1902088 6 - 9267652 -caaagt i aotNan1.NW_018514471v1 I 23 I 1 s canFam3.chr18 51772519 7 - 55844845 ttagcct i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I e cebCap1.NW_016107540v1 1400463 34 + 3566421 I e saiBol1.JH378145 740798 0 - 18371965 C a score=3241874.000000 s hg38.chr22_KI270732v1_random 25915 400 + 41543 acaagaaaatcactgtcaaaacattagcttaacatttgttaaggaaacgaaaagacttcagtgaccacaccttataaagcaaacagttttgc-acatcactttggaaaatttcact-----aaaaataaaaac----------cttgagaatataataa-----------------gtaaataaaatttaaaac------cacaaaacatta--------ctgtgtttgtgggggggg-gggt--tctgatttacagaataaccacatagtaattataatt------attataacgtccagttttc-aaaaaaagttacaagacatacaaagaattggaaagtatggctcattcaaaggaacaaaacaaactgacagaaagtatctctaaggaaacccagacttcaaacttactagacaaagactttaaaactactctcttcattatactcaaatgt s panTro5.chr2B 114773226 395 - 133216015 acaagaaaatcactgtcaaaacattatcttaacatttgttaaggaaacaaaaagacttcggtgaccacaccttataaagcaaacagttttgt-taatcactttggaaaatttcact-----aaaaa--atatc----------cttaacaatataataa-----------------gtaaataaaatttaaaac------cacagaacatta--------gtgtgtttgtaggggggg-g-----tctgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaacgggaaagtatgggtcattcaaagggacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttaaaacaactctcttaattatactcaaatgt i panTro5.chr2B C 0 C 0 s panPan2.chr7 97404535 396 - 162613886 accagaaaatcactgtcaaaacattagcttaacatttgttaaggaaacaaaaagacttcggtgaccacaccttataaagcaaatagttttgt-aaatcactttggaaaatttcact-----aaaaaaaaaatc----------cttaacaatataataa-----------------gtaaagaaaatttaaaac------cacaaaacatta--------ctgtgtttgtaggggttg-------ttcgatttgcagagtaaccacttagtaattatagtt------attagaatgtccagttttc-aaaaaacgttacaaggcatacaaagaatgggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttaaaacaactctcttaattatactcaaatgt i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 141940 396 + 150013 acaagaaaatcactgtcaaaacattagcttaacatttgttaaggaaacgaaaagacttcggtgaccacaccttataaagcaaacagttttgt-acatcactttggaaaatttcact-----aaaaataaaaac----------cttgagaatataataa-----------------gtaaataaaatttaaaac------cacaaaacatta--------gtgtgtttgtgggggggg-------tctgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaacgggaaagtatggctcattcaaaggaacaaaacaaactgacagaaaatatctctaaggaaacccagacttcaaacttactagagaaagactttaaaacaactctcttcattatactcaaatgt i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40175706 396 - 81552678 acaagaaaatcactgtcaaaacattagcttaacatttgttaaggaaacaaaaagacttcagtgaccacaccttataaagcaaacagttttgt-aaaccaccttggaaaatttcact-----gtaaaaaaaaac----------cttaacgatataataa-----------------gtaaataaaatttaaaac------cacaaaacatta--------gtgtttttgtaggggggg-------cctgatttacagagtaaccacatagtaattataatt------attataatatccagttttc-aaaaaaagttacaaggcatacaaagaataggaaagtatggctcattcaaaggaacaaactaaattgacagaaaatatctctaaggaaacccagacatcaaacttactacacaaagactttaaaacaactctcttaattatactcaaatgt i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133478525 397 - 185818997 agtagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaac----------cttaacaatataataa-----------------gtaaataaaaattaaaat-------aaaaaacatca--------gtatgtttgttggggggg-g-----actgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaagcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcaaatgt i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308208 397 + 192294377 AGTAGAaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaac----------cttaacaatataataa-----------------gtaaataaaaattaaaat-------aaaaaacatca--------gtatgtttgttggggggg-g-----actgatttacagagtaaccacatagtaattataatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcaaatgt i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790077 392 + 3123512 agtagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaatgacttcagtgatcacaccttatagagcaagcagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaac----------cttaacaatataataa-----------------gtaaataaaaattaaaat------aaaaaaacatta--------gtatgtttgttggggggg-g-----actgatttacagagtaaccacatag------taatt------attataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctataaggaaacccagacatcaaacttactagacaaagactttataacaactctcttaattatactcagatgt i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2510778 404 + 10077455 agaagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaac----------cttaacaatataataa-----------------gtaaataaaatttaaaat------aaaaaaacatta--------gtgtgtttgtggggggtg-g-----tctgatttacagagtaaccacatagtaattataattattataattataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttataacagctctcttaattatactcaaatgt i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716380 402 + 127223203 acaagaaaatcactgtc-aaattttagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttataaagcaaacagttttgtaaaatcactttggaaaatttcact-----aaaaaaactaac----------cttaacaatataataa-----------------gtaaataaaattttaaat------caagaaacgtta--------gtgtgtttgtagggggagag-----tctgatttacagagtaaccacatagtaattataattattataattataacgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaaatatgcctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagatatcaaacttactagacaaagactttataacaa--ctcttaattatactcaaatgt i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183373 404 - 1799296 agaagaaaatcactgtc-aaataatagcttaacattagttaaggaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcact----aaaaaaaactaac----------cttaacaatataataa-----------------gtaaataaaatttaaaat------aaaaaaacatta--------gtgtgtttgtggggggtg-g-----tctgatttacagagtaaccacatagtaattataattattataattataatgtccagttttc-aaaaaaagttacaaggcatacaaagaattggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatctctaaggaaacccagacatcaaacttactagacaaagactttataacagctctcttaattatactcaaatgt i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760255 400 + 6934359 agaagaaaatcactgtc-aaataatagcttaacattagttaaagaaacaaaaagacttcagtgatcacaccttatagagcaaacagttttgtaaaatcactttggaaaatttcact-----aaataaattaac----------cttaacaatatattaa-----------------gtaaataaaatttaaaat------caaaaaatgtta--------gtgtgtttgtgggggg---g-----tctgatttacagagtaaccacatagtaattataattactataattataatgtccagttttc--aaaaaagttacaaggcatacaaagaatgggaaagtatggctcattcaaaggaacaaaataaattgacagaaaatatatctaaggaaacccagacatcaaacttactagacaaagactttctaacaactctcttaattatactcaaatgt i colAng1.NW_012115910v1 C 0 C 0 s saiBol1.JH378145 740798 411 - 18371965 acaaagaaatcactgtcaaaacattagtttaacattagtcaaggaaacaaaaagacttcagtgaacacaccttataaagtaaacagttttgtagaatcagcttggaaaacttcagt----aaaaaaaatccac----------cttaaaaatacaataa-----------------gtaaatggaatttaaaat------cacaaaatgttagagaatgtgtgtgtttgtagg-ggag-------tctgctttaaagagtaaccacatagtaattataattattacaattataatgtgcggctttc-aaaaaaaatcacaaggcatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacataaaatatctctaaggaagcccagacatcaaactgactaggcaaaggttttgaaaccactttctttattatactcaaatgt i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1400497 416 + 3566421 acaaagaaatcactgtcaaaacattagcttaacattagttaaggaaacaaaaagatttcagtgaacacaccctataaagtaaacagttttgtataatcagcttggaaaacttcactaaaaaaaaaaaattaac----------cttaaaaatataacaa-----------------gtaaatagaatttaaaac------cacaaaatgttagagaatgtgtgtgtttgtagg-gggg-------tctgctttaaagagtaaccacatagtaattataattattataattataacatacagctttcaaaaaaaaatcacaagacatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacataaaatatctctaaggaagcccagacatcaaacttactaggtaaagattttgaaaccactttcttaattatgctcaaatgt i cebCap1.NW_016107540v1 I 34 C 0 s aotNan1.NW_018514471v1 1902095 415 - 9267652 acaaagaaatcgctgtcaaaacattagcttaacattagttaaggaaacaaaaagaccttggtgaacacatcctataaagtaaacagttttgtagaatcagcttggaaaacttgact-aaaaaaaaaaattaac----------cccaaaaatataataa-----------------gtaaatagaatttaaaac------cacaaaatgttatagaatgtgtatgtttgttggagggg-------tctgctttaaagagtaatcacacagcaattataattcttataattataatgtgcagctttc-aaaaaaaatcacaaggcatacaaagaatggaaaagtatgggtcattcaaaggaataaaataaatagacttaaaatgtctctaaagaagcccagatatgaaacttactaggcaaagattttgaaaccactttcttaattatactcaaatgt i aotNan1.NW_018514471v1 I 1 C 0 s canFam3.chr18 51772526 425 - 55844845 acaaggaaatctctgtcaaaacattagctgaacatgagttaaaggaacaaaaaa--ttcagtggtcacactatacaagaaatacaattttacaaacgttgtctggaaaattccact-----aaacaaataggctgctatggttcttaacaatgaagcaaaacaaaaatacacccacacaaatgaaa--taaaacaagacaaacaaaaactta--------acaaatcctaaggaaggg-ggagaatctgatttctagaatagccacattataat-------------attcaattgttcagttttt-gacaaaaatcatgaggcatacgaagaaaaaatatatatagcccattcataggaacaaattaaattgacaaaaagtgcccttgaagatgcccatacatcaaacttactagactaagactttaaaatcacgggcttaaatatgctcaaaggg i canFam3.chr18 C 0 C 0 e calJac3.chr8 108119180 5010 - 128169293 I a score=3220252.000000 s hg38.chr22_KI270732v1_random 26315 384 + 41543 caaa-------aggaaaacataaacaaagaaatcaaggaatcag-----aaaaaatattaaaaagtaggaatatcaacaaagagat---------------------aacagaaattctggagtggaaaactacagtgataataattcaaaaatcaccagagggatttcag--agtatatttgc-acacacagaagaagtcatgaacttgaagataagaaaatggaaaatactgactctgagaa---acagaaagaataacaaat-aaaaaat-gagcagagactaaggaatctgtgggacatcatcaaatagaccaagattcatattctagaaGGATAAATTATGTTGTTAAAAACTTTACCAt--tctttc-tttccacctttctttcttcct-----------------ccctccccctcct-----------ccatctttttacttttcttc s panTro5.chr2B 114773621 379 - 133216015 caaatgtcaaaaggaaaacataaacaaagaaatgaaggaatcag-----aaaaaatattaaaaagtaggaatatcaacaaagagat---------------------aacagaaattctggagtggaaaactacaatgataaaaatttaaaaatcaccagaggggtttaag--agtagatttgc-acacacagaaaaagtcatgagcttgaagataagaaaatggaaaatattgattctgagaa---acaga------------t-aaaaaat-gagcagagactaaggaatctgtgggacatcatcaaatagaccaacattcatattctacaaggataaaTTATGTTGTTAAAAACTTTACctt--tctttc-ctttcacctttctttcttcct-----------------ccctccccctcct-----------cctcctctttacttttcttc i panTro5.chr2B C 0 C 0 s panPan2.chr7 97404931 374 - 162613886 caaa-------aggaaaacataaacagagaaatcaaggaatcag-----aaaaaatattaaaaagtaggaatatcaacaaagagat---------------------aacagaaattctggagtggaaaactacaatgataaaaattcaaaaatcaccagagggatttaag--agtatatttgc-acacacagaagaagtcatgaacttgaagataagaaaatggaaaatactgactctgagaa---acagaaagaataaaaaat-aaacaat-gagcagagactaatgaatctgtgggacatcatcaaataaaccaacattcatattctagaaGGATAAATTATGTTATTAAAAAGTTTACCct--tc-ttc-ttttcacctttcttccttcct-----------------ccttcccccctc--------------------ttacttttcttc i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142336 384 + 150013 caaa-------aggaaaacataaacaaagaaataaaggaatcag-----aaaaaatattaaaaagcaggaatatcaacaaagagat---------------------aacagaaattctggagtggaaaactacaatgataataattcaaaaatcaccagagggatttcag--agtatatttgc-acacacagaagaagtcatgaacttgaagataagaaaatggaaaatactgactctgagaa---acagaaagaatatcaaat-aaaaaat-gagcagagactaaggaatctgtgggacatcatcaaatagaccaacattcatattctagaaGGATAAATTATGTTGTTGAAAACTTTAGCAt--tctttc-ttttcacctttctttcttcct-----------------ccctccccctcct-----------acacctttttacttttcttc i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40176102 380 - 81552678 cgaa-------agaaaaacataaacaaagagataaaggaatcag-----aaaaaatatgaaaaggtaggaaaatcaacaaggagat---------------------aacagaaattctggagttgaaatctacaatgataaaaattaaaaaatcaccagagggatttaag--aatatatttgc-acacacagaagaagtaatgagcttgaagataagaaaatggaaaatattgactctgagaa---acagaaagaataacaaat-aaaaaat-gagcagagactaaggaatctatgggatatcatcaaatagaccaacattcatattctagaaGGATAAATTATGTTGTTAAAAACTTTACCAt--tctttc-ttttcaccttt----cttcct-----------------ccctccccctcct-----------tcttctttttacttttcttc i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133478922 383 - 185818997 caaa-------aggaaaacataaacaaagaaataaaggaattag------aaaaatatgaaaaagtaagaatatcaagaaagagat----------------------acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgacaa---acagaaagaataacacat-aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAT--TCTTTCTTTTTCACCTTTCTCTCTTCCT-----------------CCCTCTCCTCCTT-----------CCTCCttcttactttttttc i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308605 383 + 192294377 caaa-------aggaaaacataaacaaagaaataaaggaattag------aaaaatatgaaaaagtaagaatatcaagaaagagat----------------------acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgacaa---acagaaagaataacacat-aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAT--TCTTTCTTTTTCACCTTTCTctcttcct-----------------ccctctcctcctt-----------cctccttcttactttttttc i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790469 382 + 3123512 caaa-------aggaaaacataaacaaagaaataaaggaattag------aaaaatatgaaaaagtaagaatatcaagaaagagat----------------------acagtaattctagaactgaaaacaacaataataaaaattttaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgacaa---acagaaagaataacacat-aaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTGTTAAAAACTTTACCAt--tctttc-ttttcacctttctctcttcct-----------------ccctctcctcctt-----------cctccttctttctttttttc i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511182 381 + 10077455 caaa-------aggaaaacataaacaaagaaataaaggaattac------aaaaatatgaaaaagtaagaatatcaagaaagagat----------------------acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccaaagggattcaag--agtatatttgc-acacacagaagaagccatgagcttgaagataagaaaatggaaaatattga--ctgagaa---acagaaagaataacacataaaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagcccaacattcatattCTAAAAGGATAAATTACGTTGTTAAAAACTTTACCAT--tctttc-ttttcacctttctttcttcct-----------------ccctctccctcgt-----------cctccttctttcttttcttc i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5716782 379 + 127223203 caaa-------aggaaaacataaacaaagaaataaaggaattag------aaaaatatgaaaaagtaagaatatcaagaaagagat----------------------acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccagagggattcaag--agtatatttgc-acacacagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgagaa---acagaaagaatagcacat-aaaaaaa-gaacagagactaaggaatctgtgggatatcatcaaaaagaccaacattcatattCTAAAAGGATAAATTATGTTATTAAAAACTTTACCAT--tctttc-ttttcacctttctttcttctt-----------------ccctctccctagt-----------cctcctca---cttttcttc i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1183777 381 - 1799296 caaa-------aggaaaacataaacaaagaaataaaggaattag------aaaaatatgaaaaagtaagaatatcaagaaagagat----------------------acagtaattctagaactgaaaacaacaatgataaaaatttaaaaatcaccaaagggattcaag--agtatatttgc-acacacagaagaagccatgagcttgaagataagaaaatggaaaatattga--ctgagaa---acagaaagaataacacat-aaaaaaatgaacagagactaaggaatctgtgggacatcatcaaaaagcccaacattcatattCTAAAAGGATAAATTACGTTGTTAAAAACTTTACCAt--tctttc-ttttcacctttctttcttcct-----------------ccctctccctcgt-----------cctccttctttcttttcttc i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1760655 379 + 6934359 caaa-------aggaaaacataaacaaagaaataaaggaattag------aaaaatatgaaaaagtaagaatatcaagaaagagat----------------------acagtaattctagaactgaaaacaacaatgatacaaatttaaaaatcaccagagggattcaag--agtatatttgc-acaggcagaagaagtcatgagcttgaagataagaaaatggaaaatattgactctgagaa---acagaaagaataatacataaaaaaat-gaacagagactaaggaatctgtgggacatcatcaaaaagaccaacattcatattCTAAAAGGATCAATTATGTTGTTAAAAACTTTACCAT--tctttg-ttttcacctt----tcttcct-----------------ccctctccctcgt-----------cctccttcttatttttcttc i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124190 376 - 128169293 caag-------agggaaactccatctcaaaaaaaaa-----aaaa----aaaaaatacggaaaactaagaatatcaacaaagagat----------------------acagaaattctggagctgaaaaatacaatgccaaaaataaaaaattcaccagagggactcaag--agtctatttgtgacacag---aaaagtcatgagcttgaagataagaaaatagaaaatactgactctgagaa---acagaaagaataacaaat-aaaaaat-gaacagagactatggaatctgtgggacatcaagaaatagaccaacatTCAAATTCAAAACCAATAAATTCTGTTGTTAAAAACTTTAACATTCTTTTTT-TTATCACctttctttcttcct-----------------ctatctc---cct-----------cctcttccttaattttcttc i calJac3.chr8 I 5010 C 0 s saiBol1.JH378145 741209 369 - 18371965 ctaa-------agaaaaacataaacaaagaaaggaa----tcaga----aaaaaatatgaaagagtaagaatatcaacaaagagat----------------------acagaaattctggagctgaaaactacaatgacaaaaataaaaaatgcaccagagggattcaag--agtctatttgcaacccac---agaagtcatgagcttgaagat-----aatagaaaatattga--ccgagaa---acagaaagaataacaaat--aaaaat-gaacagagactgaagaatctgtggcacattaggaaacagaccaacattcatattCAAAAATGCAAAATTCTATTGTTAAAAACTTTAACAG--TTATTG-TTATCACCCTTCTTTCTTCCT-----------------CCATCCC-CTCCT-----------CTTCCTTCTTAATTTTCTTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1400913 382 + 3566421 ctaa-------agaaaaacataaacaaagaaataaaggaatcaga----aaaaaatatgaaagagtacgaatatcaacaaagagat----------------------acagaaattttggagctgaaaactacaatgacaaaactaaaaaatgcaccagagggattcaag--agtctatttgcgacccacagaagaagtaatgagattgaagataagaaaataggaaatatcga--ctgaaaa---acagaaagaaaaacaaat-aaaaaat-gaacagagactgaggaatctgtggcacatcaagaaatagaccaacattcatattCAAAAATGAAAAATTATATTGTTAAAAACTTTAACA---TTCTTT-TTATCACCTTTCTTtcttcct-----------------ccatccccctcct-----------cttccttcttaattttcttc i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1902510 381 - 9267652 ctaa-------agaaaaacataaacaaagaaataaaggaatc--a----aaaaaatatggaagactaagaatatcaacaaagagat----------------------acagaaattctggagctgaaaactacaatgacaaaaataaaaagctcaccagagggattcaag--agtctatttgcgacacag--aagaagtcatgagcttgaagataagaaaatagaaaatattgactctgagaa---acagaaagaataacaaat-aaaatat-gaagagagactaaggaatctgtgggatatcaagaagtagaccaacattcatattCAAAAACAATAAATTCTATTGTTAAAAACTTTAACAt--tctttt-ttatcatctttctttcttcct-----------------ccatcttcctcct-----------cttccttcttaattttcttc i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51772951 391 - 55844845 ctaa-------aggaaaacatgagaatagaaatgagggaatcagaaaacaacagagaaagaaaaatgagaataccaacaaggagatagaaatcataaaaaatgaacaaatagaaatttcggagctgaaatctatgatagaggaaaataaaaatgcatca----gatctgagctggtggattaac-actt----------caatgaacttaaaggtaagaccatgggagtaacaaaatctgactaatgacagaaacagggatga---aggaagt-taacagagtctaagtgacctctgggatatcatcaagATG-TCACCTCCCACATTCT-------------------------------------TCTTTC-TTTTTAATTATCTCAATTACTAAGAGATGTGCTAAGTGCCCTCACTATATTAGTGCATATGACCATTTCTTCAGCTTTCTTG i canFam3.chr18 C 0 I 318 a score=1467011.000000 s hg38.chr22_KI270732v1_random 26699 162 + 41543 ctcttcctttctcttctt---tctctccttcattatccctttcactctgtttctcttt--ctccctttct--ttt-ttcttttctttcaattttctcaattactaagagatgtttaaatacccttaccatgttagtagatatggttatt-tctccctttagttctCTTTTG s panTro5.chr2B 114774000 167 - 133216015 ctcttcctttctcttcttctttctctccttcattatcccttttgctctgtttctcttt--ctccctttctctttt-ttcttttctttCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACCATGTTAGTAGATATGGTTATT-TCTCCCTTTAGTTCTCTTTTG i panTro5.chr2B C 0 C 0 s panPan2.chr7 97405305 165 - 162613886 ctcttcctttgtcttcttctttctctccttcattatccctttca-tctgtttctcttt--ctccctttctc-ttt-ttcttttctttCAATTTTCTCAATTACTAAGAGATGTTTAAGTACCCTTACCATGTTAGTAGATACGGTTATT-TCTCCCTTTAGTTCTCTTTTG i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142720 161 + 150013 ctcttcctttctcttct----tctctccttcattatccctttcgctctgtttctcttt--ctccctttct--ttt-gtcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACCATGTTAGTAGATATGGTTATT-TCTCCCTTTAGTTCTCTTTTG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40176482 167 - 81552678 ctcttcctttctcttcttctttctctccttcattatccctatcgctctgtttctcttt--ctccctttctgtttt-ttcttttcttGCAATTTTCTCAATAACTAAGAGATGTTTAAATACCCTTACCATGTTAGTAGATATGGTTATT-TCTCCCTTTAGTTCTCTTTGG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133479305 169 - 185818997 ctcttcctttctcttcttctttctctccttcattatcccttttgctctgtttctctctccctccctttctctttt-ttcttttctttCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67308988 169 + 192294377 ctcttcctttctcttcttctttctctcctTCATTATCCCTTTTGCTCTGTTTCTCTCTCCCTCCCTTTCTCTTTT-TTCTTTTCTTTCAATTTTCTCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2790851 169 + 3123512 ctcttcctttctcttcttctttctctccttcattatcccttttgctctgtttctctctccctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACCGTGTTAGTAGATATAGTTATT-TCTCCCTTCATTTCTCTTTTG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511563 169 + 10077455 ctcttcctttctcttcttctttctctccttcattatcccttttgctccgtttctctctctctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAAATGTTTAAATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCTTCAGTTCTCTTTTG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717161 169 + 127223203 ctcttcctttctcttcttctttctctctttcattatcccttttgctccgtttctctctctctccctttctctttt-ttcttttctttcaattttctCAATTACTAAAAAATATTTAAATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCTTCAGTTCTCTTTTG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184158 169 - 1799296 ctcttcctttctcttcttctttctctccttcattatcccttttgctccgtttctctctctctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAAATGTTTACATACCCTTACCATGTTAGTAGATATAGTTATT-TCTCCCATCAGTTCTCTTTTG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761034 169 + 6934359 ctcttcctttctcttcttctttctctccttcattatcccttttgctctgtttctctgtctctccctttctctttt-ttcttttctttcaattttctCAATTACTAAGAGATGTTTAAATACCCTTACTGTGTTGGTAGATATGGTTATT-TCTCCCTTCAGTTCTCTTTTG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124566 162 - 128169293 ctcttcctttctcttctt---tctctccctcattatcc----ctctctgtttttttct--ttccctttctctttttttctttACTTTAAATTTTCTCAATATCTAAGAGATGTTTAAATACTTTTACTGTGTTAGTAGATACGGTTTTTCTCTGTCTTCAGGTCCCTTTTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 741578 163 - 18371965 Ctcttcctttctcttctt---tctctccttcattatccc--tctctctgtttttttct--ttctctttctcttttattctttactttcAGTTTTCGCAATTACTAAGAGATGTTTAAATACTTTTACTGTGTTAGTAGATACGGTTATT-TCTCTCTTTAGGTCCTTTTTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401295 161 + 3566421 ctcttcctttctcttctt---tctccccttcattatccc--tctctctgtttttttct--ttccctttctcttttattctttactttcaatttTCTCAATTACTAAGAGATGTTTAAATACTTTTAC--TGTTAGTAGATATGGTTATT-TCTCTCTTTAGGTCCCTTTTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1902891 160 - 9267652 ctcttcctttctcttctt---tctctccttcattatcc----ctctctg-ttttttct--ttccctttctctttttttctttactttcaattttctCAATTGCTAAGAGATGTTTAAATACTTTTACTGTGTTAGCAGATATGATTATT-TCTCTCTTCAGGTCCCTTTTG i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 51773342 318 - 55844845 I a score=1150021.000000 s hg38.chr22_KI270732v1_random 26861 138 + 41543 AGATTTATAGTC-ACTCTAA-----------------------GTAAAG----AGATAACCCAAACATAAGCCTCACAAACAGGCTTGCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATGTTTTAT-AACA----------------- s panTro5.chr2B 114774167 138 - 133216015 AGATTTATAGTC-ACTCTAA-----------------------GTAAAG----AGATAACCCAAACATAAGCCTCACAAACAGGCTTCCATACCGTTCTTAATTTGG---TCCTGTAATTCTTCATGGCTGTATTAACTTTCTGATGCTTTTGAGG-----------ATGTTTTAT-AACA----------------- i panTro5.chr2B C 0 C 0 s panPan2.chr7 97405470 138 - 162613886 AGATGTATAGTC-ACTCTAA-----------------------GTAAAG----AGATAACCCAAACATAAGCGTCACAAACAGGCTTTCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATGTTTTAT-AACA----------------- i panPan2.chr7 C 0 C 0 s gorGor5.CYUI01000341v1 142881 138 + 150013 AAATTTATAGTC-ACTCTAA-----------------------GTAAAG----AGATAACCCAAACATAAGCGTCACAAACAGGCTTGCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATCTTTTAT-AACA----------------- i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40176649 138 - 81552678 AGATTTATAGTC-ACTCTAA-----------------------GTAAAG----AGATAACCCAAACATAAGCCTCACAAACAGGCTTCCATACCATTCTTAATTTGG---TCCCGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATGTTTTAT-AAGA----------------- i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133479474 139 - 185818997 AGATTTATCATC-ACTTTAA-----------------------GTATAG----AGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------CTTTTTTTTAAACA----------------- i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309157 139 + 192294377 AGATTTATCATC-ACTTTAA-----------------------GTATAG----AGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------CTTTTTTTTAAACA----------------- i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791020 139 + 3123512 AGATTTATCATC-ACTTTAA-----------------------GTATAG----AGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCCTTCTTAATTTGG---TTCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------CTTTTTTTTAAACA----------------- i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511732 140 + 10077455 AGATTTATAGTC-ACTTTAA-----------------------GTATAA----AGATAACCCAAACATATGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG----------ATTTTTTTTTTAACA----------------- i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717330 138 + 127223203 AGATTTATAGTC-ACTTTAA-----------------------GTATAA----AGATAACCCAAACATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTTGG---TCCTGTAATTCTTCATGGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATTTTTTTT-AACA----------------- i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184327 139 - 1799296 AGATTTATAGTC-ACTTTAA-----------------------GTATAA----AGATAACCCAAACATATGGCTCACAAACAGACTTCCAAACCATTCTTAATTTGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------ATTTTTTTTAAACA----------------- i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761203 138 + 6934359 AGATTCATAGTC-ACTTTAA-----------------------GTATAG----AGATAACCCAAGCATAAGGCTCACAAACAGACTTCCATACCATTCTTAATTCGG---TCCTGTAATTCTTCATTGCTGTATTAACTTTCTGATGCTTTTAAGG-----------A-TTTTTTTAAACA----------------- i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124728 141 - 128169293 AGATTGATACTCAACTCTGA-----------------------GTAAAG----AGATAACCCAAATATAAGAATCATAAACAGACGTCCATACCATTCTTAATCTTGTAATTCTTCATTGCTTCACTGTTCTATTAACATTCTGATGC-TTTAAGA-----------ATGTTTTAT-AAAA----------------- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 741741 141 - 18371965 TGATTGATACTCAACTCTGA-----------------------GTAAAG----AAATAATCCAAATGTAAGAATCATAAACAGGCTTCCATTCCATTCTTAATCTTGTAATTCTTCATTGCTTCATTGTTGTGTTAACTTTCTGATGC-TTTAAGA-----------ATGTTTTAT-AAAA----------------- i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401456 141 + 3566421 TGATTGATACTCAACTCTGA-----------------------GTAAAG----AGATAATCCAAATATAAGAATCATAAACAGGCTTCCATACCATTCTTAATCTTGTAATTCTTTGTTGCTTCATTGTTGTATTAACTTTCTGATGC-TTTAAGA-----------ATGTTTTAT-AGAA----------------- i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1903051 141 - 9267652 AGATTGATACTCAACTCTGA-----------------------GTAAAG----AGACAACCCAAATATAAGAATCATAAACAGGCTTCCATATCATTCTTAATCTTGTAATTCTTCATTGCTTCATTGTTGTATTAACTTTCTGATGC-TTTAAGA-----------ATGTTTTAT-AAAA----------------- i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51773660 193 - 55844845 aaattaatgttg-tctctaagctactcattctgtggtgctttggtgtagcccaagctgacccagataTCAGACTCACCTACAGGTTTCCATACCCTCCCTAATCTTG--ATCCTATAACTCTGCAGTGCTTTATT-GCTCAGTGTTGCTTTCATAAACATTGTTTTAAtttttttt-aagatttatttattcatgaga i canFam3.chr18 I 318 I 158 a score=3143274.000000 s hg38.chr22_KI270732v1_random 26999 345 + 41543 AATTGTTTAGTTTTCTCCAACGGAATGTTTATTCTGAGTTATCTAATTCATATT-GTAAGTATATAGGGAG-TTTAATATAAAATTATTAAACTAATATTTGTGAAAGAATGTatttgtgcatttaacaaatatgttaatcctcagactgttattgggcagctgagcatacagcaataaaaata--------------------acaTAATTTTTATGTGTACAATATTTATGGAATAAATTACTGGAACCAA--------TAAAT--ACTTTAGTTAATAACATG-ACCAAGAACAGAAACTGTATACACTATAGAGCATAGTAATGGAATAATGAGTGATTAAAGTTATTAATATTAGGTAGAAAATGAAGGGTAT s panTro5.chr2B 114774305 341 - 133216015 AATTGTTTAGTTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATACATATT-GTAAGTATATAGGGAG-TTTAATATAAAATTATTAAA----TATTTGTGAAAGAATCTATTTGTGCATTTAACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGCAATAAAAATA--------------------ACATAATTTTTAGGTGTACAATATTTATGGAATACGTTACTGGAACAAA--------TAAAT--AATTTAGTTAATAACATG-ACAAAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAATGATTAAAGTTATTAATATTAGGTAGAACATGAAGGGTAT i panTro5.chr2B C 0 C 0 s panPan2.chr7 97405608 343 - 162613886 AATTGTTTAGTTTTTTCCACTGGAATGTTTATTCTGAGTTATCTAATTCATATT-GTAAGTATATA-GGAG-TTTAATATAAAATTATTAAACTAATATTTGTGAAAGAATGTATTTGTGCATTTAACAAATATGTTAATCCTCAGACTGTTATTGGGCAGCTGAGCATACAGGAATAAAAATA--------------------ACATAA-TTTTATGTGTACAGTATTTATGGAATACGTTACTGGACCTAA--------TAAAT--AATTTAGTTAATAACATGAACAAAGAACAG-AATTGTATACACTATAGAGCATAGTAATGGAATAATGAATGATTAAAGTTATTAATATTAGGTAGAAAATGAAGGGTAT i panPan2.chr7 C 0 N 0 s gorGor5.CYUI01000341v1 143019 344 + 150013 AATTGTTTAGTTTTCTCCAACGGAATGTTTCATCTGAGTTATCTAATTCATATT-GTAAGTATATAGGGAG-TTTAATATAAAATTATTAAACTAATATTTGTGAAAGAATGTATTTGTGCATTTAACAAATATGTTAATCCTCAAACAGTTATTGGGCAGCTGAACATACAGCAATAAAAACA--------------------ACATAATTTTTATGTGTACAATATTTATGGAATAAATTACTGGAACCAA--------TAAAT--ACTTTAGTTAATAACATG-AC-AAGAACAGAAATTGTATACACTATAGAGCATAGTAATGGAATAATGAGTGATTAAAGTTATTAATATTAGGTAGAAAATGAAGGGTAT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40176787 345 - 81552678 AATTGTTTAGTTTTTT-CAATGGAATGTTGATTCTGAATTTTCTAATTCATATTCATAAGTATATAGGGAG-TTTAATATAAAAGTATTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATGTTAATCTTCAAACTGTTCTTGGGCAGCTGAGCATACAGCAATAAAAATA--------------------ACATAATTTTTATGTGTACAATATTTATAGAATACATTCCTGAAACAAA--------TAAAT--AATTTAGTTAATAACATG-ACAAAGAACAGAAATTGTATACACTATAGAGCATAGTAAAGGAATAATGAATGATTAAAATTATTAATATCAGGTAGAAAATGAAGGGTAT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133479613 335 - 185818997 AATTGTTTAGTTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCACATT-TTAAGTATATAGGGAG-TTTAATATAAAAATTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATA--------------------ACATAATTTTTATGTGTACAA-ATTTATGTaataaat-----aaatgaa--------taatt--tagttaataaataaCATG-ACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAAT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309296 340 + 192294377 AATTGTTTAGTTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCACATT-TTAAGTATATAGGGAG-TTTAATATAAAAATTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATA--------------------ACATAATTTTTATGTGTACAA-ATTTATGTaataaattactgaaatgaa--------taatt--tagttaataaataaCATG-ACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAAT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791159 340 + 3123512 AATTGTTTAGTTTTTTCCAATGGAATGTTTATTATGAATTATCTAATTCACATT-TTAAGTATATAGGGAG-TTTAATATAAAATTTTTAAACTGATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATA--------------------ACATAATTTTTATGTGTACAA-ATTTATGTaataaattactgaaatgaa--------taatt--tagttaataaataaCATG-ACAAAGAACAGAAATTGTATACACTATAGAACACAGTAATAGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAAGAAT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2511872 340 + 10077455 AATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATATT-TTAAGTATATAGGGAG-TTTAATATAAAAATTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATA--------------------ACATAATTTTTATGTGTACAA-ATTTATGGaataaattactgaaatgaa--------taatt--tagttaataaataacatg-acaaagaacagaaataGTATACATTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGAT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717468 340 + 127223203 AATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATATT-TTAAGTATATAGGGAG-TTTAATATAAAATTTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATA--------------------ACATAATTTTTATGTGTACAA-ATTTATGGaataaattactgaaatgaa--------taatt--tagttaataaataaCATG-ACAAAGAACAGAAATTGTATGCACTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGAT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184466 340 - 1799296 AATTGTTTAGTTTTATCCAATGGAATATTTATTCTGAATTATCTAATTCATGTT-TTAAGTATATAGGGAG-TTTAATATAAAAATTTTAAACTAATATTTGTGAAAGAATGTATTTGTCCATTTAACAAATATATTAATCCTCAAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATA--------------------ACATAATTTTTATGTGTACAA-ATTTATGGAATAAATTACTGAAATGAA--------TAATT--TAGTTAATAAATAACATG-ACAAAGAACAGAAATTGTATACATTATAGAACACAGTAATGGAATAATGAATGATTAAAATTATTAATAT----TAGAAAATGAAAGGGAT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761341 342 + 6934359 AATTGTTTAGCTTTTTCCAATGGAATGTTTATTCTGAATTATCTAATTCATATT-TTCAGTATATAGGGAG-TTTAATATAAAATTTTTAAACTAATATTTGTGAAAGAGTGTATTTGTTCATTTAACAAATATATTAATCCTCTAACTGTTATTGGTCAGCTGAGCATATAGCAATAAAAATA--------------------AC--AATTTTTATGTGTACAA-ATTTGTAGaataaattactgaaatgaa--------taatt--tagttaataaataacatg-acaaagaacataaatTGTATACACTCTAGAACACAGTAATGGAATAATGAATGATTAAATTTATTAATATTAGATAGAAAATGAAAGGGAT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108124869 351 - 128169293 TATTGCTTAGTTTTTTCCAATAGAATGTTTATTCTGAATTATCTAATTCATATT-GCAAGTATTTAGGGAG-TTTAATATAAAATTATGAAACTAATACTTGTGAAAGAGTGCATTTGTCCATTTTACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGTATATAGCAAAAAAAAAAAAAA----------------ACCTAAATTTTATATGCACAATATGTATGGAATATATTACAGAAACAAA--------TAATCAATAAATACTAAATAACATC-ACAAAGAACAGAAATTATATACACCACAGAGCATAGTAATGGAATAATGAATGATTAAAGTTATTAATTTTGGATAGAAAATGAAGGGGAT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 741882 362 - 18371965 TATTTCTTAGTTTATCCCAAAAGAATGTTTATTCTGAATTATCTAATTCATATT-GCAAGTATATAGGGAG-TTTAATATAAAATTATTAAACTAATACTTGTGAAAGAGTGTATTTGTCCATTTTACAAATATGTTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGTaaaaaaaaaaaaaaaaaaaaaaaaaaaaaCACCTAATTTTTATATGCACAATATGTACGGAATATATACC---AATAAA--------TAATT--TACTTACTAAATAACATC-ACAAAGAACAGAAATTGTATACACTACAGAGCATAGTAATGGAATTATGAATGATTAAAGTTATTAATTTTAGATAGAAAATGAAGGGGAT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401597 340 + 3566421 TATTTCTTAGTTTTTTCCAATAGAATGTTTATTCTGAATTATCTAATTCATATT-GCAAGCATATAGGGAG-TTAAATATAAAATTATTAAACTAATAATTGTGAAAGAATGTATTTGTCCATTTTACAAATATGTTAATCCTCAATCTGTTATTGGGCAGCTGAGCATACAGCAAAAAAAA----------------------CTCTAATGTTTATATGCACCATATGTATGGAATATATATC---AATAAA--------TAATT--TACTCACTAAATAATATC-ACAAAGAACAGAAATTTTATACACTACAGAGCAtagtaatggaataattaatgattaaaattattaattTTAGATAGAAAATGAAGAGGAT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1903192 346 - 9267652 TATTGCTTAGTTTTTTCCAATAGAATGTTTATTCTGAGTTATCTAATTCATATT-ACAAGTATATAGGGAG-TTTAATATAAAATTATTAAACTAATACTTGTGAAAGAGTGTATTTGCCCATTTTACAAATATGCTAATCCTCAAACTGTTATTGGGCAGCTGAGCATACAGCaaaaaaaaaaaaaaaaaaaaa---------CCCTAATTTTTAT-------ATATGTGTGGAATATATATC---AATAAA--------TAATT--TACTTACTAAATAACATC-ACAAAGAACAGAAATTGTATACACTACAGAGCAtagtaatggaataatgaatgattaaaattattaattTTAGATAGAAAATGAAGGGGAT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51774011 348 - 55844845 AATTGTTCAATTTTCTTTGGTGAAATGCTTATTTTGAATTTTCTAGTCAACATT-GCAATTA--TGGGAAGTTTTGATTTAAAATTACTACACTGGTACTTGTGAAATAATTTattcatccatttaacaaatacattaactgccaagctgtgactggggacctgagcatacaacaatacaaatg--------------------acttattgtctatcctcatagagtttatgtaataaaatacataaacaaattagtaattaatt--aactgatcaattaatatt-acaaagactagaagttgtatacataatagagcattgtaaaggggtaatgaatgttTAAAACTATTATATTTACACAGAAAATAAAGC---- i canFam3.chr18 I 158 C 0 a score=8853557.000000 s hg38.chr22_KI270732v1_random 27344 1062 + 41543 CTTTGAGAGCAGA------ACTCAAGGAAGC--------------AAGCAATTCGCCTTACG-AAAAAAGAG-TTACCTGTAGATAAAAGAAAAA-CTGAAAAATTTACAAGTCAAGACTTTTTGAGCAAAAACAAAAATATGACTATTAGTCACCAATTCAGTACAGT-GAAAAAAGAGTTGAAGA---GATATCTTGGAAGTAAACCATGTTGTGGAagagcatgtagggttttgataatcatgggatgattctgaattaattttaaatgcgataggaatatatgagataatttcaccagagaataacatgactgtgtttgcatttcaaaggggtgtatctcgtgcactgtgaagaa-----taaa-----taggt-tatgtgagc-----aaataaattcggaggctattgtagt-ccacagaaaataggtagtgacttaggtgagaatgctgtgagtatgagtggtattagtggtgagaagtcgtcaggccatagatgtatttcagaggactggccaag-agaactgcagctaaactggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-AGGCTGATGCCTCTCATTAAGAGAGTTACTTGGGAA-----TGGC--------AAGATCAAACCTT-----CTCACTTTCAAATTTAT-GAAAAATATTGTTTTCCAAACGAATGACTTTGGGATCAGAAAGCCATCATTCTAACTGATGGTTCCACAACTACACGGGTTCAC-----ACTCCCAAGAGCAAAAGTAAATCATCAC-AAAGGTGCTTC-----------CTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTA-ACAGTTCCCTTTTTAGCCTACAC-GCTA-TTTTT-CTTTAAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTCAC---TTAAATTCTCATAT---GAAATACCACTATGCTTAAATTAGTCAAAACATTTTCCCGGTCTACACCTC-TATCTTGTCATTGCAATCATTTTCACAAAAGTGACTGCAGCTCACAGACCCTAAAAGGG-GAAAATCCAGGGTAGGTTATCTGATCTAGTTAGTTTG s panTro5.chr2B 114774646 1063 - 133216015 CTTTGAGAGCAGA------ACTCAAGGAAGC--------------AAGCAATTTGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATTTACAAGTCAAGACTTTTTAAGCAAAAACAAAAATATGACTTTTAGTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGAAGAGATATCTTGGAAGTAAATCATGTTGTGGAagagcacatagggttttgataatcatgggattattctgaattaattttaaatgcgataggaatatatgagataatttcaccagagaataacatgattgcgtttgcatttcaaaggggtgtatctggtgcactgtgtagaa-----taaa-----taggt-tatgtgagc-----aagtaaattgggaggctattgtaat-ccagagaaaaaaggtagtgacttaggtgagaatgctgtaagtatgagtggtattagtggtgagaagtcgttaggccatggatgtatttcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAAGAGAGTTACTTGGGAA-----TGGC--------AAGATCAAAACTT-----CTCACATTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGACGGTTCCACGACTACACAGGCTCAC-----ACTCCCAAGAGCAAAAGTAAATCATCAC-AAAGGTGCTTC-----------CTGATAATTCTACAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTA-GCAGTTCCCTTTTTAGCCTAAAC-GCTA-TTTTT--TTTAAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTAAC---TTAAATTCTCATAT---TAAATACCACTATGCTTAAATTAGTCAAAACATTTTCCCCATCTACAACTC-AATCTTTTCATTGCAATCATTTTCAcaaaagtgactgcagctaacagaccctaaa-ggg-gaaaatctagggtaggttatctgatctagttagtttt i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 143363 1065 + 150013 CTTTGAGAGCAGA------ACTCAAGGAAGC--------------AAGCAATTCGCCTTATGAAAAAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATTTACAAGTCAAGACTTTTTGAGCAAAAACAAAAATATGACTATTAGTCACCAATTCAGTACAGTGGAAAAAAAAGTTGAAGA---GATATCTTGGAAGTAAACCATGCTGTGGAagagcatgtagggttttgataatcatgggatgattctgaattaattttaaatgcgataggaatatatgagataatttcaccagagaataacatgactgtgtttgcatttcaaaggggtgtatctcgtgcactgtgaagaa-----taaa-----taggt-tatgtgagc-----aaataaattgggaggctattgtaat-ccacagaaaataggtagtgacttaggtgagaatgctatgagtatgagtggtattagtggtgagaagtcgtcaggccatggatgtatttcagaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAAGAGAGTTACTTGGGAA-----TGGC--------AAGATCAAACCTT-----CTCACTTTCAAATTTAT-GAAAAATATTGTTTTCCGAACGAATGACTTTGGGATTAGAAAGCCATCATTCTAATTGATGGTTCCACGACTACACGGGCTCAC-----ACTCCCAAGAGCAAAAGTAAATCATCAC-AAAGGTGCTTC-----------CTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTA-GCAGTTCCCTTTTTAGCCTAAAC-GCTA-TTTTTTTTTTAAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-GTAAC---TTAAATTCTCATAT---GAAATACCACTATGCTTAAATTAGTCAAAACATTTTCCCCATCTACAACTC-TATCTTGTCATTGCAATCATTTTCACAAAAGTGACTGCAGCTCACAGACCCTAAAAGGA-GAAAATCCAGGGTAGGTTATCTGATCTAGTTAGTTTG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40177132 1066 - 81552678 CTTT--GAGCAGATTGCTTGCTCAAGGAAGC--------------AAGCAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGGAAAATTTACAAGTCAAGACTTTTTGAGCAAAAACAAATATATGACTCTTAGTCACCATTTCAGTACAGT-GAAAAAAAAGTTGAAGA---GACATCTTGGAACTAAACCATGCTGTGGAagagcatgtagggttttgataatcatgggattattttgaattaattttaaatgcgataggaatatatgagataatttcacaagagaataacatgattgtgtttgcatttcaaaggggtgtatctggtgcactgtgtagaa-----taaa-----taggt-tatgtaagc-----aaataaattggaatactattgtaat-ccagagaaagaaggtagtgacttaggtgagaatgctgttagtatgagtggtattagtggtgagaagtcgttaggccttggatgtatttcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaagatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAAGAGAGTTACTTGGGAA-----CGGC--------AAGATCAAAACTT-----CTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAATGACTTTGCGATCAGAAAGCCATCATTCTAACTGATGGTTCCACGACTACACAGGCTCAC-----ACTCCCAAGAGCAAAATTAAATCATCAC-AAAGGTGCTTC-----------CTGATAATTCTAGAGAATGGAGAATTACTGTAACATCTTTCTGATTTTAGGAGAGGTA-GCAGTTCCCTTTTTAGCCTAAAC-GCTA-TTTTT-TTTTAAAGCTCAGCCAAGAGACTCCATTATAATTTTCAAATG-TGT-CTAAC---TTAAATTCTCATGT---TAAATACCACTATGCTTAAATTAGTCAAAACATTTTTCCCATCTACAACCC-TATCCTTTCATTGCAATCATTTTCTCAAAAGTGACTGCAGCTAACAGACCCTAAAAGGT-GAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133479948 1063 - 185818997 CTTTGAGAGCAGA------CTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGA---GCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgattatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcaaagggatatatatggtacactgtaaagaa-----taaa-----tatgt-tatgtgggc-----aaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaactt-----cTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTTTAGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAAC-ACTA-TTTTT--TTTAAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTAAC-----AACTTCTCATATTAATAAATACCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCAC-AAAGTGACTGCAACTAACTGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67309636 1063 + 192294377 CTTTGAGAGCAGA------CTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGA---GCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataagaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggatatatatggtacactgtaaagaa-----taaa-----tatgg-tatgtgggc-----aaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAGGAGAATTACTTGGGAA-----TGGC--------AAGATCAAAACTT-----CTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTTTAGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAAC-ACTA-TTTTT--TTTAAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTAAC-----AACTTCTCATATTAATAAATACCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCAC-AAAGTGACTGCAACTAACTGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2791499 1063 + 3123512 CTTTGAGAGCAGA------CTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGA---GCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggatatatatggtacactgtaaagaa-----taaa-----tatgt-tatgtgggc-----aaacaaattgggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagtcgttaggtcatggatgtatttcgtaggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaactt-----cTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAATGAATGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTGTTGTAACATCATTCTGATTTTAGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAAC-ACTA-TTTTT--TTTAAAGCTCAGTCAAGAGACTCCATTATGATTTTCAAAAATTGT-GTAAC-----AACTTCTCATATTAATAAATACCACTATGCTTAAATTAGTCAAAACATTC-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCAC-AAAGTGACTGCAACTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTACCTGATCTAGTTAGTTTT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2512212 1062 + 10077455 CTTTGAGAGCAGA------CTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATATATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTATAGT-GAAAAAAAAGTTGAAGA---GCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatggcattattttgaatcaattttaaatgcaataggaatacgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaagggttatatatggtacactgtaaagaa-----taaa-----tacgt-tatgtgggc-----aaacaaatttgaaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaactt-----cTCACTTTCAAATTTAT-GAAAAATGTTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGCTTTTAGGAGaggta-gcagttccctttttagcttaaac-acta-ttttt--ttt-aagctcagtcaagagactccattataattttcaaaaattgt-gtaac-----aaCTTCTCATATTAATAAATACCACTATGCTTAAATTAATCAAAACATTT-CCCCATCTGCAACTCTTATCTTTTCATCGCGATCATTTTCAC-AAAGGGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAATTAGTTTT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5717808 1065 + 127223203 CTTTGAGAACAGA------CTTCAAGGAAAC--------------AAGGAATTAGCCTTAAG-AAGAAAGAG-TTACCTGTGGATAAAGAAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGA---GCTATCTTGGAACTAAACCATGCTATATAAGAGTATGTAGGGTTTTGATAATCATGGGATCATTTTGAATCAATTTTAAATGCAATAGGAATATGTGAGATAATTTCACCAGAGAATAACATGATTGTGTTTGCATTTCGAAGGTGTATATACGGTACACTGTAAAGAA-----TAAA-----TACGT-TATgtgggc-----aaacaaatttggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtgggatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccgag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcagggatgactctcagCACTGGAAGGTGACAGCTGTCACTGAAGC-ATGCTGATGCCTCTTATTAGGAGAATTACTTGGGAA-----TGGC--------AAGATCAAAACTT-----CTCACTTTCAAATTTAT-GAAAAATAATGTTTTCAGAACGAAAGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAT-AAAAGTGCTTC-----------AGTGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGATTTTAGGAGAGGTA-GCAGCTCCCTTTTTAGCTTAAAC-GCTA--TTAT--TTGAAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTAAC---TTAACTTCTCATATTAATAAATAGCACTATGCTTAAATTAATCAAAACATTTCCCCCATCTGCAACTCTTATCTTTTCATTGCGATCATTTTCAC-AAAGTGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAGTTAATTTT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1184806 1063 - 1799296 CTTTGAGAGCAGA------CTTCAAGGAAAC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATCAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTATAGT-GAAAAAAAAGTTGAAGA---GCTATCTTGGAACTAAACCATGCTATATAagagtatgtagggttttgataatcatgggattattttgaatcaattttaaatgcaataggaatatgtgagataatttcaccagagaataacatgattgtgtttgcatttcgaaggggtatatatggtacactgtaaagaa-----taaa-----tacgt-tatgtgggc-----aaacaaatttggaggctattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttggtatgagtggtatgagtggtgagaagttgttaggtcatggatgtatttcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcactgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaactt-----cTCACTTTCAAATTTAT-GAAAAATGTTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGCCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATAATCAT-AAAAGTGCTTC-----------GATGCAATTCTAGAGAACAGAGAATTATTGTAACATCATTCTGCTTTTAGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAAC-ACTA-TTTTT--TTTAAAGCTCAGTCAAGAGACTCCATTATAATTTTCAAAAATTGT-GTAAC-----AACTTCTCATATTAATAAATACCACTATGCTTAAATTAATCAAAACATTT-CCCCATCTGCAACTCTTACCTTTTCATCGCGATCATTTTCAC-AAAGGGACTGCAGCTAACCGACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAATTAGTTTT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1761683 1066 + 6934359 CTTTGAGAGCAGA------CTTCAAAGAAAC--------------AATGAATTACCCTTATG-AGGAAAGAG-TTACCAGTGGATAAAGGAGAAA-CTGAAAAATGTATAAATGAAGACTTTTTGAGCAAAAACAATAATATGACTATTACTCACCAATTCAGTACAGT-GAAAAAAAAGTTGAAGC---GCTATCTTGGAACTAAACCATGCTATacaagagtatgtagggttttgataatcatgggattattctgaatcaattttaaatgtgataggaatatgtgagataatttcaccagagaatagcatgattgtgtttgcatttcgaaggggtatatatggtatgttgtgaagaa-----taaa-----tatgt-tacgtgggc-----aaacaaattgggagactattgtaatcccagagaaaaaaggtagtgacttagatgagaatgctgttagtatgagtggtatgagtcgtaagaagtcgttaggtcatggatgtatttcataggactggccaag-agaactgcagctaaattggagtgtagggagtgaaa-----tggagaactcaaggatgactctcagcactggaaggtgacagctgtcagtgaagc-atgctgatgcctcttattaggagaattacttgggaa-----tggc--------aagatcaaaactt-----cTCACTTTCAAATTTAT-GAAAAATATTGTTTTCAGAACGAACGACTTTGGGATCAGAAAGTCATCATTCTAATTGATGGTTCCATGACTACACAGGCTCAG-----ACTCACAAAAGCAAAATTAAATCATCAC-AAAAGTGCTTC-----------GATATAATTCTATAGAACAGAGAATTATTGTAACATCATTCTGATTTTAGGAGAGGTA-GCAGTTCCCTTTTTAGCTTAAGC-GCTATTTTTT--TTTAAAGCTCAGTCAAGACACTCCATTATAATTTTCAAAAATTGT-GTAAC---TTAACTTCCCATGTTAATAAATACCACAATGCTTAAATTAGTCAAAACATTT-CCCCATCTGCAACTCTTATCTTTTCATTGCAATCATTTTCAC-AAAGTGACTGCAGCTAACCAACCCTAAAAGGT-GAAAATCTTGGGTAGGTTATCTGATCTAGCTAGTTTT i colAng1.NW_012115910v1 C 0 I 319 s calJac3.chr8 108125220 1077 - 128169293 ATTTGAGAATAGA------CCTCAAGGAAGCAAGCTTTCCTCATAAAGGAATTAGATTTATG-AGGAAAGAC-TGACCTGTGAATAAAGGAGAAA-CTGAAAAATTTATATGGCAAGACTTTTTGAGCAAAAAG-AAAATATGACTATTACTCATCAATGCACTACAGT-GAATAAAAAGTTGAAGA---CATATCTTGGAATTAAACCATGTTAgataagagcatgtagggttttgataatcatgaaattattttgaattaatttaaaatgcgataggaatacatgagataatttcaccacagaataacatgattgtgtttgcacttcaaaggggtatatctggtgcactgtggagaa-----taaa-----taggt-taagtgcac-----aaataaattaagaggctattgtagt-ccagagaaaaaaggttgtggcttagatgagaatgctgttaatgtaagtggtatgagtggtgagaagtggttaggccatggatgtatttcaaaggactggccaag-agaactgcagctaaatcagagtgtagggagtaaaa-----tggagaaagcaaaggtgactctcagCACTGGAATATGGCAGCTGTCACTGAAGCAACGCTGATGCCTCTTAATACGAGGGTTACTTGGGGAG----TGGC--------AAGATCAGAAGATCAAAACTCACTTTCAAATTTAC-AAAAAATTTTGTTTTCAGAACTGATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTCCATAACTACAGAAGTTCGA-----ACTCACAAGAGCAAAATTAAATCATCAC-AAAGCTGCTTC-----------TAGACAATTCTAGAGAATAGAGAATTACTGTAACAGCATTCTGATTTTAGGAGAGGTG-GCAGTTCCCTTTTTAGCCTAAAT-GTTT-TTTTT--CT--AAGCTCAGCCAGGAGACACCATTATAATTTTCAATAATTTTGG--------TAACTTGTCATGT---TAAATACCACTATGCTTAAATTAGCCAAAACATTTTCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACTGCAACTAACAGACCCTAAATGGTGAAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 742244 1060 - 18371965 CTTTGAGAGTAGA------CCTCAAGGAAGC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGAATAAAGGAGAAA-CTGAAAAATTCATATGTCAAGACTTTCTGAGCAAAAAGAAAAATATGACTATTACTCACCAATGCACTACAAT-TAATAAAAAGTTGAAGA---CATATCTTGGAATTAAACCATGCTGGGTAagagcatgtagggttttggtaatcatggaattattttgaattaattttaaatgtaataggaatacatgagataatttcaccagaaaatgatatgattgcgtttgcatttcaaaggggtatatctggtgcactgtggagaa-----taaa-----tagat-taagtgcac-----aaataaattaagaggctattgtagt-ccagagaaaaaaggttgtggcttagatgagaatgctgttaatataagtggcatgagtggtgagaagtggttaggccatggatatatttcagaggactagccaaa-agaactgcagctaaatccgagtgtagggagtaaaa-----tggagaacgtgaagat--cactcagcaatggaaggtggcagctgtcactgaAGCAATGCTGATGCCTCTTATTACGAGGGTTACTTGGGGAG----TGGC--------AAGATCAAAAGATCAAAACTCGCTTTCAAATTTACAAAAAAATGTTGTTTTCAGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTACATGACTACAGAAGCTGGA-----ACTCACGAGAGCAAAATTAAATAATCAC-AAAGCTGCTTC-----------TAGACAATTCTAAAGAATAGAGAATTACTGTAGCAGCATTCTGATTTTAGGAGAGGTG-GCAGTTCCCTTTTCAGCCTAAAT-TTTT-TTTTT--TT--AAGCTCAGCCAAGAGACACCATTATAATTTTCAAAAAATTT-G--------CAACTTGTCATAT---TAAATACCGCTATGCTTAAATTAGTCAAAACATTTTCCCTAAGTGCAACTT-TATCTTTTCATTGCAATCATTTTCAC-AAAGTGACTGCAACTAACAGACCCTAAGTGGT-AAAAATCTAGGGTAGGTTATCTGATCTAGTTAGTTTT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1401937 1055 + 3566421 CTTTGAGAGTAGA------CCTCAAGGAAGC--------------AAGGAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGAATAAAGGAGAAA-CTGAAAAATTCATATGTCAAGACTTTCTGAGCAAAAAGAAAGATATGACTATTACTCACCAATGCACTACAGT-GAATAAAAAGTTGAAGA---CATATCTTGGAATTAAACCATGCTAgataagagcatatagggttttgataatcatggaattattttgaattaattttaaatgcgataggaatacatgagataatttcaccagagaataacatgattgcgtttgcatttcgaagaggtatatctggtgcactgtggagaa-----taaataggttaggt-taagtgcac-----aaataagttaggaggctactgtaat-ccagagaaaaaaggttgtggcttaggtgagaatgctgttaacgtaagtggaatgagtggtgagaagtggttaggccatggatatgtttca-aggactggccgag-agaactgcagctaactcagagtgtaggggataaaa-----tggagaacacaaagatgactctcagCAGTGGAAGTTGGCAGCTGTCACTGAAGCAATGCTGATGCCTCTTATTAGGAGGGCTACTTGGGGAG----TGGC--------AAGATCAGAAGATCAAAACTCACTTTCAAATTTAC-AAAAAATGTTGTTTTCGGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTGATGGTTCCGTGACTACAGAAGCTCGA-----ACTCACAAGAGCAAAATTAAATCATCAC-AAAGCTGCTTC-----------TAGACAATTCTAGAGAATAGAGAATTACAGTAACAGCATTCTGATTTTAGGAGAGGTG-GCAGTTCCCTTTT-AGCCTAAATGGTTT-TTTTT--TT--AAGCTCAGGCAAGAGACACCATTGTAATTTTCAAAAATGTT-G--------TAACTTAACTTGT---CATA-----------TTAAATTATTCAAAACATTTCCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACTGCAACTAACAGACCCTAAATGGT-GAACATCTAGGGTAGGTTATCTGTTCTAGTTAGTTTT i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1903538 1039 - 9267652 CTTTGAGAGTAGA------CATCAAGGAAGC--------------AAGAAATTAGCCTTATG-AGGAAAGAG-TTACCTGTGAATAAAGGAGAAA-CTGAAAAATTTATATGTCAAGACTTTCTGAGCAAAAGGAAAAATATGACTATTACTCACCACTGCACTACCGT-GAATAAAATGTTGAAGA---CATATCTTGGAATTAAACCATGCTggataagagcatgtagggttttgataatcatggaattattttgaatgaattttaaatgcgataggaatacatgaggtaatttcaccagagaataacatgattgtgtctgcatttcaaaggggtatatctggtgcgctgtggagaa-----taaa-----taggt-taagtgcgc-----aaataaattaggaagctattgtaat-ccagagaaaaaaggttgtggcttagataagaatgctgttaatttaagtggtatgagtggtgagaagtggttaggccaaggatgtatttcaaaggactggccaag-agaactgcagctaaatcagagtgtagggagtaaaa---------------------------------tggaagGTGGCAGCTGTCACTGAAGCAATGGTGATGCCTCTTATTACGAGGGTTACTTGGGAAG----TGGC--------AAGATCAGAAGATCAAAACTCACTTTCAAATTTAC-AGAAATTATTGTTTTCAGAACTAATGACTTTGGGATCAGAAAGCTATCATTCTAATTTATGGTTCCATGACTACAGAAGCTCGA-----ACTCACAAGAGCAAAATTAAATCATCACAAAAGCTGCTTC-----------TAGACAATTCTAGAGAATAGAGAATTACTGTAACAGCATTCTGATTTTAGGAGAGGTC-GCAGTTCCCTTTTTAGCCTAAAT-GTTT-TTTGT--TT--AAGCTCAGCCAAGAGACACCATTATAATTTTCAAAAATTTT-GTAAC---TTAACTTGTCATGT---TAAATACC-CCATGCTTAAATTAGTCAAAACATTTTCCCTATGTGCAACTT-TATCTTTTCATTGCAATCATTTTCACAAAAGTGACAACAACTAACAGACCCTAAATGGT-GAAAATCTAGGGTAGGCTATCTGATCTAGTTAGTTTT i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51774359 1075 - 55844845 TTTTGAGAGTAGA------CTTTCGAAAAGC--------------AAGGAGTGCCCGATAAG-GGGAAAGAGAGCTTCTGTGGATAAAGGAACAATTTAAAAAATGTATGAGTCAAGAGTTTTTGAGCAAGGGCAAAGATGTGAGGATCCCTA--TGACTCAGCACAGT--AAAGACAAGTCAAAGA---GACATCCCAGAAACAGACCATAACTTAAAagagcatgtagggtcttgtcaaccacggtgttattttgaattaactttaaatgtgataagaacacattagataagtttaccaggggatagcatgatcttgtttatatttcaaca--------ctggtacactttggagaaaagagtaaa-----cgggtacagaagagccagaaaaacaagtctgggggctctagtgat-cctgagaaaaaaggtagtgacttggatt-gaatg--------gtgagagg-gtaagtggtggcaagtggtcagtacatggatacgttttaaaggaagtgcaaagaagagctatggataaattgca-tgaagggagtaagagaaatgggagaattcaaggatgactccaagctctagaagatgagcccattcagtgaaagaatgatgatgacttttactataaga--tgcttggagaataactggttcaaaaggaaaataataaatt-----ctaatttggagattcat-ggcaagtGTTGTCTCCAGAACCAATGATTTTGCAGTCAGGAAGCGAGCATTCCATTGTGTAGCT-CATGACTGTACAGGCTCAGATATAATCCATGAGAGC-AAATTAAATTACCAT-GAAAGTAATTAAATTACTCCAGAAGGTAATTCTGGAG-ATAGA-AATTAGTGCAA-----TTCTGGTTTGGACAGAGGTAGGTAACTTCCTTTCTAGCCGGAGA-TTCA-TATTT-----AAAGGTCAGCCAAGAGATTGCACCATCATCTCCAACAATTAT-GTACATGTTTAATTACTCGCAT---TCAATTCCTCTGTGCTTATACTAGTCAACACAGTT----TATCTACAACTG-TGTCTTTGAGTTGCAGTAattattccaaaaatgactgcagctaacagactttaaagaat-gggaatctggattaggttatcttgtctaattagtttt i canFam3.chr18 C 0 C 0 a score=770229.000000 s hg38.chr22_KI270732v1_random 28406 90 + 41543 GAAGACAGGATCTAGAGATTATTTAATATGAAATAGGTCACCTGAAATGAAGTGTTTATTGAAA--ACAGCTTGGATCAACCCAGTTTTCTA s panTro5.chr2B 114775709 90 - 133216015 gaagacaGGATCTAGAGATTATTTAATATGAAATAGGTCACCTGAAATGAAGTGTTTACTGAAA--ACAGCTTGGATCAGCCCAGTTTTCTA i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 144428 90 + 150013 GAAGACAGGATCTAGAGATTATTTAATATGAAATAGGTCACCTAAAATGAAGTGTTTACTGAAA--ACAGCTTGGATCAACCCAGTTTTCTA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40178198 90 - 81552678 GAAGACAGGATCTAGAGATTATTTAATATGAAACAGGTCACCTGAAGTGAAGTGTTTACTGAAT--ACAGTTTGGATCAGCCCAGTTTTCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133481011 90 - 185818997 GGAAACAGGATCTAGAGATTATTTAATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAA--ACTGCTTGGATCAGCCCAGTTTTCTA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310699 90 + 192294377 GGAAACAGGATCTAGAGATTATTTAATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAA--ACTGCTTGGATCAGCCCAGTTTTCTA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792562 90 + 3123512 GGAAACAGGATCTAGAGATTATTTAATATGGAATAGGTCACCTGAAATGAAGTGTTGACTGAAA--ACTGCTTGGATCAGCCCAGTTTTCTA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513274 90 + 10077455 GAAAACAGGATCTAGAGATTATTTAATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAA--ACAGCTTGGATCAGCCCAGTTTTCTA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718873 90 + 127223203 GAAAACAGGATCTAGAGATTATTTAATATGGAATAGGTCACCTGAAATGAAGTGTTTACTGAAA--ACTGCTTGGATCAGCCCAGTTTTCTA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185869 90 - 1799296 GAAAACAGGATCTAGAGATTATTTAATATGGAATAGGTCACTTGAAATGAAGTGTTTACTGAAA--ACAGCTTGGGTCAGCCCAGTTTTCTA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763068 90 + 6934359 gaaaaCAGGATCTAGAGATTATTTAATATGGAATAGGTCACCTGAAATGAATTGTTTACTGAAA--ACAGCTTGGATCAGCCCAGTTTTCTA i colAng1.NW_012115910v1 I 319 C 0 s calJac3.chr8 108126297 86 - 128169293 GAAGATAGGATCTAGAGATTATTTAATATGGAATA-ATCACCTGAAATGAAGCATTTACTGAAA--ACAGCTTGGATCAGCCCAGTTTT--- i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743304 89 - 18371965 GAAGGCAGGATCTAGAGATTATTTAATATGGAATA-ATCATCTGAAATGAAGCGTTTACTGAAA--ACAGCTTGGATCAGCCCCGTTTCCTA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1402992 89 + 3566421 GAAGACAGGATCTAGAGATTATTTAATATGGAATA-ATCATCTGAAATGAATCGTTTACTGAAA--ACAGCTTGGATCAGCCCAGTTTTCTA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904577 89 - 9267652 GAAGACAGGATCTAAAAATTATTTAATATGGAATA-ATCATCTGAAATGAAAAGTTTACTGAAA--ACAGCTTGGATCAGCCCAGTTTTCTA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51775434 52 - 55844845 gaggacaGAATC-------------------------------------AAGTGCTTATTGAAAGCACAGCTTGCCTTTAT---ATTTTCTA i canFam3.chr18 C 0 I 36 a score=1223890.000000 s hg38.chr22_KI270732v1_random 28496 154 + 41543 CCACTGAACCATGCATTTGGTTTCAAAAACACAACAACTCTGGGGAATATCGGCTGCTTCCAACTGTGTTGAAGGTGTTAAAGAAAAGAGCATATAATTATAAATGATCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGCGTCTTCCA s panTro5.chr2B 114775799 154 - 133216015 CCACTGAACCATGCATTTGGTTTAAAAAACACAACAACACTGGGGAATATTGGCTGCTTCCAACAGTGTTGAAGGTGTTAAAGAAAAGAGCATAAAATTATAAATGATCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGCGTCTTCCA i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 144518 154 + 150013 CCACTGAACCATGCATTTGGTTTCAAAAACACAACAACTCTGGGGAATATCGGCTGCTTCCAACTGTGTTGAAGGTGTTAAAGAAAAGAGCATAAAATTATAAATGATCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGCATCTTCCA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40178288 154 - 81552678 CCACTGAACCATGCATTGGGTTTAAAAAACACAACAACTCTGGGGAATATTGGCTGCTTCCAAATGTGTTGAAGATGTTAAAGAAAAGAGCATAAAATTATAAATGATCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCA i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133481101 153 - 185818997 CCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310789 153 + 192294377 CCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792652 153 + 3123512 CCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCA i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513364 153 + 10077455 CCATTGAACCATATATTTGGTTTAAAAACCACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCACAAGAGACTAGAGTCTTCCA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5718963 153 + 127223203 CCATTGAACCATGTATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACC-TGCTGAAGATGTTTAAGAAAAGAACATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCTTCCA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1185959 153 - 1799296 CCATTGAACCATATATTTGGTTTAAAAACCACAACAACTCTGGGGAACATTGACTACTTCCAACT-TGCTGAAGATGTTTAAGAAAAGAGCATAAAATTATAAATGACCATCTGAAGCCTTTATAGTCTCTGCACAAGAGACTAGAGTCTTCCA i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763158 153 + 6934359 CCATTGAACCATATATTTGGTTTAAAAAACACAACAACTCTGGGGAACATTGACTACTTCCAACT-TGTTGAAGATGTTTAAGAAAAGAGCATAAAATTATTAATGACCATCTGAGGCCTTTATAGTCTCTGCTCAAGAGACTAGAGTCCTCCG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126383 153 - 128169293 CCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGAGAACATTGGCTGCTTCCAGCCATGTTGAAGATGATATAGAAGAGAACATAAAAGAATAAATAACCATCTAAGGCCTACATAGTCCCTGCTCAAGAGACTAGAGTCTTCCA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743393 152 - 18371965 CCATTGAACCATGTATTTGGTTTAAAAACCACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCGTGTTGAAGATGATAAAGAAAAGAACATAAAAGAACAAATCACCATCTCAGGCCAATATAGTCCCTGCTCAAGAGACTAGCGTCTT-CA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403081 152 + 3566421 CCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCATGTTGAAGATGATAAAGAAAAGAACATAAAAGAATAAATAACCATCTCAGGCCTATATAGTCCCTGCTCAAGAGACTAGAGTCTT-CA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1904666 153 - 9267652 CCATTGAACCATGTATTTGGTTTAAAAAACACAA-AACTGTGGGGAACATTGGCTGCTTCCAGCCGTGTTGAAGATGCTAAAGAAAAGAGCCTAAAAGAATAAATAACCATATAAGGCCTATATAGTCCCTGCTCAAGAGACTAGAGTCTTCCA i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 51775486 36 - 55844845 I a score=2129212.000000 s hg38.chr22_KI270732v1_random 28650 251 + 41543 TTCTTAACGAAACACCCAAATATCTTAATAGTTGGGCAAA---ATCTTACT----ATCAGAGAGATAATTTTATCTTGAAGACTGTTAAATTATAATGGGGATTCACTACCTTACCACGTCTCTGACTC-AAAAATTAGATCTTTGTTTAGGAATCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAA------------------------------CACTGACTTTCTTGTGTGC-------AAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT s panTro5.chr2B 114775953 251 - 133216015 TTCTTAACGAAACACCCAAATATCTTAATAATTGGGCAAA---ATCTAAAT----ATCAGAGAAATAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCACTACCTTGCCACGTCTCTGAGTC-AAAAATTAGATCTTTGTTTAGGAATCAAT-------TGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGACTTTCTTGTGTGC-------AAAAAAAAGATGTATTGACAAAAGACAAGTCTTTCCT i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 144672 253 + 150013 TTCTTAACGAAACACCCAAATATCTTAATAATTGGGCAAA---ATCTAACT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCACTACCTTGCCACGTCTCTGACTC-AAAAATTAGATCTTTGTTTAGGAATCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGGCTCAAA------------------------------CACTGACTTTCTTGTGTGC-----AAAAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40178442 254 - 81552678 TTCTTAACGAAACACCCAAATATCTTAATAATTGGGCAAA---ATCTAAAT----ATCAGAGAGAGAATTTTATCTTGAAGATTGTTAAATTATAATGGTGATTCTCCACCTTGCCACGTCTCTGAATC-AAAAATTAGATCTTTGTTTAGGAATCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGCCTCAAA------------------------------CATTGACTTTCTTGTGTGC----AAAGAAAAAAAGACGTATTGAGGTAAGACAAGTCTTTCCT i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133481254 249 - 185818997 TTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgcctcgtctctgagtc-aaaaattagatcttcgtttaggaatcaat-------ggtactctgcaacttggaaATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGACTTTGTTGTGTGC-------AAAAAAAAGATGTATTGGGATAAGACAAGTCTTTCCT i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67310942 249 + 192294377 TTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTATCTTGAAGATTGTTAAATTACAATGGTGATTCACTACCTTGCCTCGTCTCTGAGTC-AAAAATTAGATCTTCGTTTAGGAATCAAT-------GGTACTCTGCAACTTGGAAATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGACTTTGTTGTGTGC-------AAAAAAAAGATGTATTGGGATAAGACAAGTCTTTCCT i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2792805 249 + 3123512 TTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgcctcgtctctgagtc-aaaaattagatcttcgtttgggaatcagt-------ggtactctgcaacttggaaATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGACTTTGTTGTGTGC-------AAAAAGAAGATGTATTGAGATAAGACAAGTCTTGCCT i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513517 256 + 10077455 TTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactaccttgccacgtctctgagtc-aaaaattagatctttgtttaggaatcaat-------ggtaccctgtaacttggaaATAGGAAGATTTTAGAAGACTCAAA------------------------------CATTGACTTTGTTGTGTGCAAAAAAAAAAAAAAAGACATATTGAGATAAGACAAGTCTTTCCT i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719116 240 + 127223203 TTCTTAACA------CCAAATATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAATTTTATCTTAAAGATTGTTAAATTACAGTGGTGATTCACTACCTTGCCACGTCTCTGAGTC-AAAAATTAGATCTTTGTTTAGGAATCAAT-------GGTACTCTGCAACTTAGAAATAGGAAGATTT------ACTCAAA------------------------------CATTGACTTTGTTGTGTGC------AAAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186112 249 - 1799296 TTCTTAACAGAACACCCAA--ATGTTAATAATTAGGCAAA---ATCTAAAT----ATCAGAGAGATAAttttatcttgaagattgttaaattacaatggtgattcactaccttgccacgtctctgagtc-aaaaattagatctttgtttaggaatcaat-------ggtaccctgcaacttggaaataggaagattttagaagactcAAA------------------------------CATCGACTTTGTTGTGTGC-------AAAAAAAAGACGTATTGAGATAAGACAAGTCTTTCCT i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763311 252 + 6934359 TTCTTAACAGAACACCCAAACATGTTAATAATTAGGCAAA---ATTTAAAT----ATCAGAGAGATAATTTTatcttgaagattgttaaattacaatggtgattcactgccttgccacgtctctgagtc-aaaaattagatctttgtttaggaatcaat-------ggcactctgcaagttggaaataggaagattttagaagactccaa------------------------------CATTGACTTTGTTGTGTGC------AAAAAAAAAGACGTATTGAGGTGAGACAAGTCTTTCCT i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126536 257 - 128169293 TTCTTAAAGGAACACCCAAATATCTTAATAATTGGGCAAA---AACTAAAT----ATCAGAGAGATCATTTTATCTTGAATATTGTTAAATTGTGTTGGTGTTTCACTACCTTGCCATGTCTCTGAGTC-AAAATTTAGGTCTTTGTTTAGGAATTGGTTTGTTTAGATCCTCTGCAGCTTGTAAATAGGAAGAGTTTAGAGGATTCAAA------------------------------CATTGGCTTTCTTGTGAGC--------AAAAAATGATGCATTGAGATAAGACAAGTCTTCCCT i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743545 254 - 18371965 TACTTAAAGGGACACCCAAATATCTTCATAATTGAGCAAA---AACTAAATATTAATCAGAGAGATCATTTTATCTTGAATATTGTTAAATGATCATGGTGTTTCACTACCTTGTCATATCTCTGAGTC-AAAATTTAGGTCTTCGTTTAGGAATCAAT-------GACCCTCTGCAACTTGGAAATAGGAAGACTTTAGAGGATTCAAA------------------------------CATTGGCTTTCTTGTGAGC--------AAAAAATGATTCATTGAGATAAGACAAGTCTTCCCT i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403233 249 + 3566421 TTCTTAAAGGAACACCCAAATATCTTAATAATTGGGCAAA---AACTAAAC----ATCAGAGAGATCATTTTATCTTGAATATTGTTAAATTGTAATGGTGTTTCACTACCTTGCCATATCTCTGAGTC-AAAATTTAGGTCTTTGTTTAGGAATCAAT-------GATCCTCTGCAACTTGGAAATAGGAAGATTTTAGAGGATTCAAA-------------------------------ATTGGCTTTCTCGTGAGC--------AAAAAATGATGTATTGAGATAAGACAAGTCTTCCCT i cebCap1.NW_016107540v1 C 0 I 28 s aotNan1.NW_018514471v1 1904819 249 - 9267652 TTCTTAAAGGAACACCCAAATATCTTGATAATTGGGCAAA---AACTAAAT----ATCAGAGAGATAATTTTATCTTGAATATTGTTAAATTATAATGGTGTTTCACTACCTTGCCATGTCTCTGAGTC-AAAATTTAGGTCTTTGTTTAGGAATCAAT-------GATCCTCTGCAACTTGGAAATAGAAAGATTCTAGAGGATTCCAA------------------------------CATTGGCTTTCTTGTGAGC---------AAAAATGATGTATTGAGATAAGACAAGTCTTCCCT i aotNan1.NW_018514471v1 C 0 I 885 s canFam3.chr18 51775522 283 - 55844845 TTTTTAATGACACACCCAACCATCTCAATAGTCAAGCAAATTTAACTAAAT----ATCAGAGAGAGAAACTGATCTTGAAGACTGCTAAATTACAACAGTAATTGCCAAACTAGCCGTGTTTTTGAGCCAAAAAATTAGGTCTTTGCTTTGGAATGAAC-------AATACTTTAAAATTTTGAAATAGAAATATTTGAGAGAACTCAAATAGCTCCAAAATACACAAATCCTTAAATACCATTGAGTTCCTTGTGTTC--------AAAAGTAAACAT-TTTAGATACAGCTAATCTTTCCT i canFam3.chr18 I 36 I 23 a score=206409.000000 s hg38.chr22_KI270732v1_random 28901 36 + 41543 TGCAAGGATACCTGTA--ATGCTCACACACC-ACCTCCC s panTro5.chr2B 114776204 36 - 133216015 TGCAAGGATACCTCTA--GTGCTCATACACC-ACCTCCC i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 144925 36 + 150013 TGCAAGGATACCTGTA--ATGCTCACACACC-ACCTCCC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40178696 36 - 81552678 TGCAAGGATACCTCTA--ATGCTCATACACC-ACCTCCC i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133481503 36 - 185818997 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311191 36 + 192294377 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793054 36 + 3123512 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTCCC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513773 36 + 10077455 TGCAAGGATATGTCTA--ATTCTCATACACC-ACCTCCC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719356 36 + 127223203 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTCCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186361 36 - 1799296 TGCAAGGATATGTCTG--ATTCTCATACACC-ACCTCCC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763563 36 + 6934359 TGCAAGGATACGTCTA--ATTCTCATACACC-ACCTCCG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126793 25 - 128169293 -----------GTTTG--ATGCTCATGTACC-ACCTCCT i calJac3.chr8 C 0 I 3 s saiBol1.JH378145 743799 25 - 18371965 -----------GTCTG--ATGCTCATGTACC-ACCTCCT i saiBol1.JH378145 C 0 I 3 s canFam3.chr18 51775828 39 - 55844845 TACAAAGATACATATATTATCCTCATGCACCAATCTCTC i canFam3.chr18 I 23 C 0 e aotNan1.NW_018514471v1 1905068 885 - 9267652 I e cebCap1.NW_016107540v1 1403482 28 + 3566421 I a score=251180.000000 s hg38.chr22_KI270732v1_random 28937 34 + 41543 CTAACGTTAATATAGCTTCCAGGCCACTAACCGG s panTro5.chr2B 114776240 34 - 133216015 CTAACGTTAATATAGCTTCCAGATCACTAACCAG i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 144961 34 + 150013 CTAACGTTAATATAGCTTCCAGGCCACTAACCGG i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40178732 34 - 81552678 CTAACGTTAATATAGCTTCCAGATCACTAACCAG i nomLeu3.chr19 C 0 C 0 s rheMac8.chr3 133481539 34 - 185818997 CTAACCTAAATATAGCTTCAAGATCACTAACCAG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311227 34 + 192294377 CTAACCTAAATATAGCTTCAAGATCACTAACCAG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793090 34 + 3123512 CTAACCTAAATATAGCTTCAAGATCACTAACCAG i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513809 34 + 10077455 CTAACCTAAATATAGCTTCCAGATCACTAACCAG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719392 34 + 127223203 CTAACCTAAATATAGCTTCCAGATCACTAACCAG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186397 34 - 1799296 CTAACCTAAATATAGCTTCCAGATCACTAACCAG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763599 34 + 6934359 CTAACCTAAATATAGCTTCCGGATCACTAACCAG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126821 34 - 128169293 CTAACCTTAATAAAGCTTCCAGATCACTAACTAC i calJac3.chr8 I 3 C 0 s saiBol1.JH378145 743827 34 - 18371965 CTAACCTTAATAAAGCTTCGAGATCACTAACTAC i saiBol1.JH378145 I 3 C 0 s cebCap1.NW_016107540v1 1403510 34 + 3566421 CTAACCTTAATAAAGCTTCCAGATCACTAACTAC i cebCap1.NW_016107540v1 I 28 C 0 s canFam3.chr18 51775867 33 - 55844845 TTAACCTCAA-GTAGCTCCCAGATTTCTAAGTAG i canFam3.chr18 C 0 C 0 e aotNan1.NW_018514471v1 1905068 885 - 9267652 I a score=2133719.000000 s hg38.chr22_KI270732v1_random 28971 239 + 41543 TGTCAGAGAGCAGCCTATGCAACTACAGATTCAAAAGATGTCAAACACAGGGTCAAGCCTAGAATAAGAAGTCTTAGCTAATTAAGTATGCTTTTTC----CCCCAAATTCATATTAACAAAAACTTG--GATATGTCAGAGAATGCATTCTAAGTTCACTCAACCTAGGAAGGAGAAACATAATTTTAAATTAAGAGCTGAAGCATTCTTGTCCTAAC-AGAA-AGCAAGGAa--aacgaaatatcac s panTro5.chr2B 114776274 239 - 133216015 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAACACAGGGTCAAGCCTAGAATAAGAAGTCTTAGCTAATTAAGTATGCTTTTCC----CCCCAAATTAATATTAACAAAAACTTG--GATATGTCAGAGAATGCATGCTAAGTTCACTCCACCTGGGAGGGAGAAACATAATTTTAAATTAAGAGCTGAAGCATTCTTGTCCTAAC-AAAA-AGCAAGGAA--AACGAAATATCAC i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 144995 239 + 150013 TGTCAGAGAGCAGCCTATGCAACTACAGATTCAAAAGATGTCAAACACAGGGTCAAGCCTAGAATAAGAAGTCTTAGCTAATTAAGTATGCTTTTCC----CCCCAAATTCATATTAACAAAAACTTG--GATATGTCAGAGAATGCATTCTAAGTTCACTCAACCTAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGAAGCATTCTTGTCCTAAC-AGAA-AGCAAGGAa--aacgaaatatcac i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40178766 238 - 81552678 TGCCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCGAACACAGGGTCAAGCCTAGAATAAGAAGTCTTAGCTAATTAAGTATGCTTTTT-----CCCCAAATTCATATTAACAAAAACTTG--GATATGTCAGAGAATGCATTCTAAGTTTACTCATCCTAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGAAGCATTCTTTTCCTAAC-AAAA-AGCAAGTAA--AACCAAATATCAC i nomLeu3.chr19 C 0 I 12 s rheMac8.chr3 133481573 242 - 185818997 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAACAAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACACACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCAC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311261 242 + 192294377 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAACAAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACACACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCAC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793124 242 + 3123512 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAACAAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACACACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCAC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2513843 242 + 10077455 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAACAAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACATACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCAC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719426 242 + 127223203 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTAAATTCATATTAACAAAAACATGTGGATAAGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACGCATTCTTTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCAC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186431 242 - 1799296 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTC----CCCTAAATTCATATTAACAAAAACATGTGGATAAGTCATAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACGTACTCTCTTCCTAAC-AAAATAGCAAGTAA--AATGAAATATCAC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1763633 242 + 6934359 TGTCAGAGAGCAGCCTATGCAACTACAAATTCAAAAGATGTCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGCTTTTTT----CCCTGAATTCATATTAACAAAAACATGTAGATATGTCAGAGAATGCATTCTAAGTTCACTCAACATAGGAGGGAGAAACATAATTTTAAATTAAGAGCTGACACACTCTCTTCCGAAC-AAAATAGCAAGTAA--AATGAAATATCAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108126855 247 - 128169293 TGTCAGAGAGCAGCCTATGCAGCTACAAACTCAAAAGAGGCCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTCGCTAATTAAGTATGTTTTTTTTTTCCCTCAAATTCATATTAACAAAAACATGTGGGTATATCAGGGAATGCATTCTAAGTTCACTCAACTTAGGAGGGAGAAACATAATTTTAAATAAAGGGCTGAAACACTTTCTCCCTAACAAAAATAGCCAGTAA--AATGAAGTATCGC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 743861 244 - 18371965 TGTCAGAGAGCGGCCTATACAACTACAAATTCAAAAGAGGCCAAATGCAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGATTTTTTTT--CCTTAAATTCATATTAACAAAAACATGTGGGCATATCAGGGAATGAATTCTAAGTTCACTCGACTCAGGAGGGAGAAAGATAATTTTAAATAAGGGGCTGAAGCACTTtcttcctaac-aaaatagcaagtaa--aatgaagtatcac i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403544 240 + 3566421 TGTCAGAGAGCGGCCTATGCAACTACAAATTCAAAAGAAGCCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATGATTTTTT----CCTCAAATTCATATTAACAAAAAC--GTGGGTATATCAGGGAATGCATTCTAAGTTCACTCAACTCGGGAGGGAGAAACATAATTTTAAATAAAGGGCTAAAGCACTTtcttcctaac-aaaatagcaagtaa--aatgaagtatcac i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1905953 241 - 9267652 TGTCAGAGAGCAGCCTATGCAACTGCAAATTCAAAAGAGGCCAAATACAGGGTCAAGCCTAGAATGAGAAGTCTTAGCTAATTAAGTATAATTTTTTT---CCTCAAATTCATATTAACAAAAAC--GTGGGTATATCAGGGAATGCATTCTAAGTTCACTCAACTTAGGAGGGAGAAACATAATTTTAAATAAAGGGTTGAAGCACTTtcttcctaac-aaaatagcaagtaa--aatgaagtatcac i aotNan1.NW_018514471v1 I 885 C 0 s canFam3.chr18 51775900 223 - 55844845 TGCCAGATAATAGCACACACAACTGTATATTCAAAAAAGGCCAATTATAGAATC-AGCCTGGAAAAAGAAATCTTA-CTAATACCG---ACTTTTTT----CC---AAGTTACATCCACA----------GATGTGTCAGAGAATAGATTCTACGGT-GCTCAACCTAGCA--GAGAAACACAATTTTAAATCAAGGACTGAAGTGTTTtcttcataac-aaaatagggaaaaaataatgtaatatcgc i canFam3.chr18 C 0 C 0 a score=5026304.000000 s hg38.chr22_KI270732v1_random 29210 667 + 41543 accacaggagggatttcacaaattagtgtcaacatcaaaaccttaaaataggcaaggagaatg--------cagattcacaatgaactcttgtacttgttttgttcagagaagagatggttctgagagaatgacagtgaattaaccccagctggtttag-ttagtgctttcaattgctgcttctgA-TAAACTCCTTTAGCTAGAATAAATTTATGAAGATTTTGGCATGTGGTAT-------TAGAGATGGTTATTAATTTTTTCCTCG-TATTTGCATTGTTCAATGTAGTAAATACTAGCTGTATATGGCTGCTTCAATTCAAATTAATTACAATGAAATATACTTAAATATTGAA-TTTTTTAGTCACTC-TTGGTTGATTATTGAATATATTCAGCTAAGATTTCC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTCGTC-CACAAATATTGAAGCTGTTGTTAATTCCTGATATATCCTCTGCAAATAGAATAGTCATGAGCCTCCTCCTGAAACCAGCACCCTACAGATAATTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAAGTTTTTGAAATATTAGCTTCCCAGGGAAGAAAATCAAATTCATAAGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTTAAATGACATATTCTACAA s panTro5.chr2B 114776513 647 - 133216015 ACCACAGGAGGGATTTCACAAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACTATTAACTCTTCTACTTGTTTTGTTCAGAGAAGAGATGGTTCTGAGAGAACGACAGTGA---------------------TTGGTGCTTTCAGTTGGTGCTTCTGA-TCAACTCCTTTAGCTAGAATAAATTGATGAGGATTTTGGCATGTGGTAT-------TAGGGATGGTTATTAATTTTTTCCTCT-TGTTTGCATTTTTCAATGTAGTAAATACTAGCTGTATATGGCTACTTAAATTCAAATTAATTGCAATGAAATATACTTAAATATTGAA-TTTTTTAGTCACTG-TTGGTTCATTATTGAATATCTTCAGCTAAGATTTCC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTCGTC-CACAAATGCTGACGCTGTTGTTAACTCCTGATATATTCTCTGCAAATAGAATATTCATGAGCCTCCTCCTGAAACCAGCAGCCTAGAGATACTTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAAGTTTTTGAAATATTAGCTTCCCAGGGAAGAAAATCAAATTCATAAAATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAATGACATATTCTACAA i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 145234 667 + 150013 accacaggagggatttcacaaattagtgtcaacatcaaaaccttaaaataggcaaggaaaatg--------cagattcacaatgaactcttctacttgttttgttcagagaagagatggttctgagagaatgacagtgaattaaccccagctggtttag-tttgtgctttcaattgctgcttctgA-TAAACTCCTTTAGCCAGAATAAATTTATGAAGATTTTGGCATGTGGTAT-------TAGAGATGGTTATTAATTTTTCCCTCG-TATTTGCATTGTTCAATGTAGTAAATACTAGCTGTATATGGCTACTTCAATTCAAATTAATTACAATGAAATATACTTAAATATTGAA-TTTTTTAGTCACTC-TTGGTTGATTATTGAATATCTTCAGCTAAGATTTCC-----------------CATCTAAATA-CGCTAAGAGGTGGCTTAGTTAACTGGTCGTC-CACAAATATTGAAGCTGTTGTTAACTCCTGATACATCCTCTGCAAAGAGAATATTCATGAGCCTCCACCTGAAACCAGCAGCCTACAGATAATTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAAGTTTTTGAAACATTAGCTTCCCAGGGAAGAAAATCAAATTCATAAGATACGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAATGACATATTCTACAA i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133481815 667 - 185818997 ACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAAAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAGTTGCTACTTCTGA-AGAACTCCTTCAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTTATTAATATTTTCCTCT-AATTTGCATCGTTCAATGTGGTAAATATGAGCCGTATATGGCTTCTTAAATTCAAATTAATTATGATG-AATACGCTTAAATATTCCA-TTTTTTAGTCACTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATATTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAACTGTTTGAAATATTAGCTTCCCGGGGAAGAAAATCAAATTCATAGGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67311503 667 + 192294377 ACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAGTTGCTACTTCTGA-AGAACTCCTTCAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTTATTAATATTTTCCTCT-AATTtgcatcgttcaatgtggtaaatatgagccgtatatggcttcttaaattcaaattaattatgatg-aatacgcttaaatattcca-ttttttagtcacTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATATTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAACTGTTTGAAATATTAGCTTCCCGGGGAAGAAAATCAAATTCATAGGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATACTCTACAA i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2793366 668 + 3123512 ACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAGTTGCTACTTCTGA-AGAACTCCTTCAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTTATTAATGTTTTCCTCT-AATTTGCATTGTTCAATGTGGTAAATATGAGCTGTATATGGCTTCTTAAATTCAAATTAATTATGATGAAATACGCTTAAATATTCCA-TTTTTTAGTCACTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATATTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAACTGTTTGAAATATTAGCTTCCTGGGGAAGAAAATCAAATTCATAGGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i macNem1.NW_012011522v1 C 0 I 451 s cerAty1.NW_012000909v1 2514085 669 + 10077455 ACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAATTGCTACTTCTGA-AGAACTCCTTCAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGGTAGGGTTATTAATGTTTTCCTCT-AATTTATATTGTTCAATGTGGTAAATATGAGCCGTATATGGCTTCTTAAATTCAAATTAATTATGATGAAATATGCTTAAATATTCCATTTTTTTAGTCACTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATACTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAACTGTTTGAAATATTAGCTTCCCAGGGAAGAAAATCAAATTCATAGGATATGTTAGGACAATTTAACTCAGGATGTTCAAAACTGAAACGACATATTCTACAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5719668 648 + 127223203 ACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGACAAGGAAAATG--------CAGATTCACAATTAACTCTTCTACTTGTTTTGTTCAGAGAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAATTGCTACTTCTGA-AGAACTCCTTTAGCTAGAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTTATTAATGTTTTCCTCT-AATTtgcattgttcaatgtggtaaatatgagctctatatggctacttaaattcaaattaattatgatgaaatacgcttaaatattcca-ttttttagtcacTG-TTGGTTCATTATGCAATATCTTTAGCTA-------------------------------------ACTAAGAGGTGGCTTAGTTAACT-GTTGTCTCACAAATATTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATAAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATCTATAGTCTTTAACTGTTTGAAATATTAACTTCCCGGGGAAGAAAATCAAATTCATAAGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1186673 668 - 1799296 ACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCATAAAATAGGCAAGGAAAATG--------CAGATTCTCAATTAACTCTTCTACTTGTTTTGTTCAGAAAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAGTTGCTACATCTGA-AGAACTCCTTCAGCTACAATAAATTTATGAGGATTTTGGCCTGTGGTAT-------TAGGTAGGGTTATTAATGTTTTCCTCT-AATTTACATTGTTCAATGTGGTAAATATGAGCCGTATATGGCTTCTTAAATTCAAATTAATTATGATGAAATATGCTTAAATATTCCA-TTTTTTAGTCACTG-TTGGTTCATTATGCAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-TACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATACTGAAGCTGTTGTTAGCTCCTGATATATTGTCTGCAAATAGAATATTTATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAACTGTTTGAAATATTAGCTTCCCGGGGAAGAAAATCAAATTCATAGGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i manLeu1.NW_012105809v1 C 0 I 394 s colAng1.NW_012115910v1 1763875 666 + 6934359 ACCACAGGAGGGATTTCACCAATTAGTGTCAACATCAAAACCTTAAAATAGGCAAGGAAAATG--------CAGATTCACAGTTAACTCTTCTACTTGTTTTGTTCAGAGAAGAAATGGTTCTGAGAGAATGATAGTGAATTAATACAAGCTGGTTTAG-TTGGTGCTTTCAATTGCTACTTCTGA-AGAACTCCTTTAGCTAGAATAAATGTATGAGGATTTTGGCCTGTGGTAT-------TAGATATGGTTATTAATGTTTTCCTCT-AATTTGCATTGTTCAATGTGGTAAATATGAGCTGTATATGGCTACTTAAATTCAAATTAATTATGATG-AATACACTTAAATATT-CA-TTTTTTAGTCACTG-TTGGTTCATTATGTAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATA-CACTAAGAGGTGGCTTAGTTAACTGGTTGTCTCACAAATATTGAAGCTGTTGTTAGCTTCTGATATATTGTCTGCAAATAGAATATTCATGAGCCTCTTCCTAAAATCAGCAGTCTGGGGATAATTTTATAAATTGGATACAAGTTGGAAATCTATACTCTTTAACTGTTTGAAATATTAGCTTCCCAGGGAAGAAAATCAAATTCATAAGATATGTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127102 667 - 128169293 ACCACAGGAGGGATTTCACAAATTAGTGTGAACGCAAAAACCTTAAAATAGTCAAGGAAAGTG--------CAGATTCAGAATTGACTCTTCTACTTGTTATGTTCAGAGAAGAGATGGCTGTGAGAAAATGAC--TGAATTAGCACAAACTGGTTTAG-ATGGTGCTTTCAGTTGCTACTAGTGA-TGAGCCCCTTTAGCTGGAATAAATGGATGAGGATTTTGGCATGTGGTAT-------TAGAACTGGTTATTAAT-TTTTCCTCT-AATTtgcattgttcaatatgttatatactagccatatatggctactttaattcaaattaattacaataaagtatacttcaatattcaa-ttttttcatcacTGACTGGTTTATTATATAATATATTCAGCTAAGATTTTC-----------------CTTCTAAATGCCACTAAGAGGTGGCTTAGTTAACTGGTTGTCCCACAAGTACTGAAGCTGTTGTTAACTCCTTATATATTGTCTGCATATAGAATATTCATAAACCTCTTCCTAAAATAAACAGCCTAGGGACAATTTTATAAGTGGGATACATGCTGGAAATCTACACTCTTTAACTTTTTGAAATATTAGCTTCCCAAGGAAGAAAATCATGTTTATTAGATACCTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAATGACATATTCTACGA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744105 666 - 18371965 accacaggagggatttcacaaattagtgtcaacataaaagccggaaaataggcaaggaaagtg----------gattcagaatcgactcttctgcttgtttagttcagagaagagatggctctgagagaatgacagtgaattaacacaagctggtttag-atagtgctttcaattgctgctactgATTGAGCTCCTTTAGCTGGAATAAACGTATGAGGATTTTGGCATGTGGTAT-------TAGAAATGATTATTAAT-TTTTTCtct-aatttgcattgttcaatgtggtaaatactagccatatatggctagtttaattcaaattaattacaatgaaatatactttaatattcaa--tttttagtcacTGACTGGTTTATTATATAATATTTTCAGCTAAGATTTTC-----------------CATCTAAATACCACCGAGAGGTTGCTTAGTTAACTGGTTGTCCCACAAG-ACTGAAGCTGTTGTTAACTCCTTATATGTTGTCTGAATATAAAATATTCATGAACCTCTTCCTAAAATAAACAGCCTAGGGATAATTTTATAAATGGGATACATGCTGGAAATCTATACTCTTTAACTTTTTGAAATATTAGCTTCCCAGGGAAGAAAATCATATTCATTAGATACCTTAGGACGATTTAACTCAAGATGTTCAAAACTGAAATGACGTATTCTACAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1403784 669 + 3566421 atcacaggagggagttcacaaattagtgtcaacataaaaaccttaaaataggcaaggaaagtg--------cagattcagaattaactcttctacttgttttgtccagagaagagatgactctgaaagaatgacagtaaattaacacaagctggtttag-atggtgctttcagttgctactactgA-TGAGCTCCTTTAGCTGGAATAAATGTATGAGGATTTTGGCATGTGGTAT-------TAGAAATGGTTACTAAT-TTTTCCTCT-AATTtgcattgttcaatgtggtaaatactagccatatatggccactttaattcaaattaatttcaataaaatatacttaaatattcaa-ttttctagtcacTGACTGGTTTATTATATAATATCTTCAGCTAAGATTTTC-----------------CATCTAAATACCACTAAGAGGCGGCTTAGTTAACTGGTTTTCCCACAAGTACTGCAGCTGTTGCTAACTCCTTATATGTTGTCTGCATATAGAATATTCATGAACCTCTTCCTAAAATAAACAACCTAGAGATAATTTTATAAATGGGATACATGCTGGAAATCTATACTCTTTAACTTTTTGAAATACTAGCTTCCCAGGGAAGAAAATCATATTCATTAGATACCTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAACGACATATTCTACAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906194 667 - 9267652 accacaggagggattttacaaattagtgtcaacacaaaaaccttaaaataggcaaggaaagtg--------cagattcagaattaactcttctacttgttttgttcagagaagagatggctctgagagaatgacagtgaatgaacacaagctggtttag-atggtgctttcaattgctactactga-tgagctcctttagctggaataaatGTATGAGGATTTTGGCATGTGGTAT-------TAGAAATGGTTATTAAT-TTTTCCtct-aatttgcattgttcaatgtggtaaatactagccatatatggctactttaattcaaattaattacaataaaatatacttaaaaattcaa-ttttttagtcacTGACTGGTTTATTATATAATATCTTCAGCTAAGATTTTC-----------------CATTTAAATACCACTGAGAGGTGGCTTAGTTAACTCGTTGTCCCACAAGTACGGAAGCTGTTGTTAACTCCTTACATGTTGTCTGCATATAGAATATTCATGAACCTCTTCCTAAAATAAACAGCCTAGGGATAATTTTATAAATGGGATACATGCTGGAAATCTATACTC--TAATTTTTTGAAATATTAGCTTCTCAGGGAAGAAAATCATATTCATTAGATACCTTAGGACAATTTAACTCAAGATGTTCAAAACTGAAATGACATATTCTACAA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776123 657 - 55844845 atcccaagagggatttcataaattagtgtcaacatcaaaatcttaaaatatg-aaggataatgattcccagaagagtctcaattaacttctgtgttaattttgcccagagaagagatggttctgggagaatgatagtgaattaacataagttggtttagtttggtgattccaattactactcctga-tgtactctttttgct-gaacaaattaacaaggttcttggcatgtggtatgcagttattgataaagtcattgatttttttctctaaacttgAATTATTCAATATGGTGGATGCTAGACAAATATGTCCCTTTAAAT-----TTAATTACACTTAAATTAAGTTAAATGTTTAT-GTTCTTGGGCACTGATTGGCTCATTAAACAATATCTTCAGCCAGAGCTTGCATAACCAGAGACCCCCACTTCTGAGGA-TCATCAGAGCTCCCTTAGTTAACAGTCTCTCTCACAA---------------------------ATGTTGTCTGCTAACAGAATACTTATGAGCCTCTTCCTAAAATCAACACATAAGGAATTATTTTATAATGTGG-TTCATGTTGAAAATCTATACTCTTTAACTTTTTGAAATATTAGGTTCCCAGAAGTGAAAATCAAATTCATAAAATATCTTAAGACAATGCTAGTCAAGATGTTCAAAACCGA----ACATAG------- i canFam3.chr18 C 0 C 0 e nomLeu3.chr19 40179004 12 - 81552678 I a score=53412.000000 s hg38.chr22_KI270732v1_random 29877 11 + 41543 TATGTGATAAA s panTro5.chr2B 114777160 11 - 133216015 TATGTGATAAA i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 145901 11 + 150013 CATGTGATAAA i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133482482 11 - 185818997 CACGGAATAAA i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67312170 11 + 192294377 CACGGAATAAA i macFas5.chr3 C 0 C 0 s cerAty1.NW_012000909v1 2514754 11 + 10077455 CACGGAATAAA i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720316 11 + 127223203 CACGGAATAAA i chlSab2.chr21 C 0 C 0 s colAng1.NW_012115910v1 1764541 11 + 6934359 CACGGAATAAA i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127769 11 - 128169293 CATATGATAAA i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744771 11 - 18371965 GATGTGATAAA i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404453 11 + 3566421 CATGTGATAAA i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906861 11 - 9267652 CACGTGATAAA i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776780 11 - 55844845 CATGTGGTAAA i canFam3.chr18 C 0 C 0 e manLeu1.NW_012105809v1 1187341 394 - 1799296 I e macNem1.NW_012011522v1 2794034 451 + 3123512 I e nomLeu3.chr19 40179004 12 - 81552678 I a score=13430.000000 s hg38.chr22_KI270732v1_random 29888 3 + 41543 ACC s panTro5.chr2B 114777171 3 - 133216015 AGC i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 145912 3 + 150013 ACC i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133482493 3 - 185818997 GCC i rheMac8.chr3 C 0 I 1 s macFas5.chr3 67312181 3 + 192294377 GCC i macFas5.chr3 C 0 I 1 s cerAty1.NW_012000909v1 2514765 3 + 10077455 GCC i cerAty1.NW_012000909v1 C 0 I 1 s chlSab2.chr21 5720327 3 + 127223203 GCC i chlSab2.chr21 C 0 I 1 s colAng1.NW_012115910v1 1764552 3 + 6934359 GCC i colAng1.NW_012115910v1 C 0 I 1 s rhiBie1.NW_016806392v1 1457716 3 + 4622379 ACC i rhiBie1.NW_016806392v1 N 0 I 6 s calJac3.chr8 108127780 3 - 128169293 ATC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744782 3 - 18371965 ATC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404464 3 + 3566421 ATC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906872 3 - 9267652 ATC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776791 3 - 55844845 ACC i canFam3.chr18 C 0 C 0 e manLeu1.NW_012105809v1 1187341 394 - 1799296 I e macNem1.NW_012011522v1 2794034 451 + 3123512 I e nomLeu3.chr19 40179004 12 - 81552678 I a score=27429.000000 s hg38.chr22_KI270732v1_random 29891 5 + 41543 ACCTG s panTro5.chr2B 114777174 5 - 133216015 ACCCC i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 145915 5 + 150013 ACCCC i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133482497 4 - 185818997 -CCCC i rheMac8.chr3 I 1 I 340 s macFas5.chr3 67312185 4 + 192294377 -CCCC i macFas5.chr3 I 1 I 338 s cerAty1.NW_012000909v1 2514769 4 + 10077455 -CCCC i cerAty1.NW_012000909v1 I 1 I 48 s chlSab2.chr21 5720331 4 + 127223203 -CCCC i chlSab2.chr21 I 1 I 97 s nasLar1.chr3 66914690 4 + 179790006 -ACCT i nasLar1.chr3 N 0 N 0 s colAng1.NW_012115910v1 1764556 4 + 6934359 -CCCC i colAng1.NW_012115910v1 I 1 C 0 s rhiRox1.KN300005v1 708068 4 - 4311341 -ACCT i rhiRox1.KN300005v1 N 0 N 0 s rhiBie1.NW_016806392v1 1457725 4 + 4622379 -ACCT i rhiBie1.NW_016806392v1 I 6 N 0 s calJac3.chr8 108127783 5 - 128169293 ACCCC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744785 5 - 18371965 ACCCC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404467 5 + 3566421 ACCCC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906875 5 - 9267652 ACCCC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776794 5 - 55844845 ACCTT i canFam3.chr18 C 0 C 0 e manLeu1.NW_012105809v1 1187341 394 - 1799296 I e macNem1.NW_012011522v1 2794034 451 + 3123512 I e nomLeu3.chr19 40179004 12 - 81552678 I a score=213636.000000 s hg38.chr22_KI270732v1_random 29896 39 + 41543 CTAACA-------------------------------------------------ACTTAAAGCAAAACAGGGATTGACCTTAAAGAC s panTro5.chr2B 114777179 39 - 133216015 GTAACA-------------------------------------------------ACTTAAAGCAAAACAGGGATTGACCTTAAAGAC i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 145920 39 + 150013 CTAACA-------------------------------------------------ACTTAAAGCAAAACAGGGATTGACCTTAAAGAC i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133482841 39 - 185818997 CTAACA-------------------------------------------------ATCTAAAGCAAAACAGGTATTGACCTTAGAGAC i rheMac8.chr3 I 340 C 0 s macFas5.chr3 67312527 39 + 192294377 CTAACA-------------------------------------------------ATCTAAAGCAAAACAGGTATTGACCTTAGAGAC i macFas5.chr3 I 338 C 0 s cerAty1.NW_012000909v1 2514821 88 + 10077455 CTAACAACCTAAAGCAAACCAGGGATTGACCTTAAAGACCTGTCTTTCCCTAACAATCTAAAGCAAAACAGGTATTGACCTTAGAGAC i cerAty1.NW_012000909v1 I 48 C 0 s chlSab2.chr21 5720432 39 + 127223203 CTAACA-------------------------------------------------ACCTAAAGCAAAACAGGTATTGACCTTAGAGAC i chlSab2.chr21 I 97 C 0 s manLeu1.NW_012105809v1 1187735 39 - 1799296 CTAACA-------------------------------------------------ATCTAAAGCAAAACAGGTATTGGCCTTAGAGAC i manLeu1.NW_012105809v1 I 394 C 0 s colAng1.NW_012115910v1 1764560 87 + 6934359 CTAACA-ACTAAAGCAAAAGAGGGTTTGACCTTAAAGATGTGCATTTCCCTAACAACCTAAAGCAAAACAGGGATTGACCTTAAAGAC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127788 39 - 128169293 CTAACA-------------------------------------------------ACCTAAAGTAAAACAGGGATTAACCTTAAAGAC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744790 39 - 18371965 CTAACA-------------------------------------------------ACCTAAAGTAAAACAGGGATTAACCTTAAAGAC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404472 39 + 3566421 CTAAAA-------------------------------------------------ACCTAAAGTCAAACAGGGATTAACCTTAAAGAC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906880 39 - 9267652 CTAACA-------------------------------------------------ACCTAAAGTAAAACAGGGATTAACCTTAAAGAC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776799 31 - 55844845 ---------------------------------------------------------CTAAGTGAACACAAGAATTGATCTTAAAGTT i canFam3.chr18 C 0 C 0 e macNem1.NW_012011522v1 2794034 451 + 3123512 I e nomLeu3.chr19 40179004 12 - 81552678 I a score=347276.000000 s hg38.chr22_KI270732v1_random 29935 55 + 41543 CTGCCTTTTCCTCATGCC-CCAGCCAATCAGTTTTCAAATCTTGCATTTTATTTTG s panTro5.chr2B 114777218 55 - 133216015 GTGCCTTTTCCTCATCCC-CCAGCCAATCAGTTTTCAAATCTTGCATTTTCTTTTG i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 145959 55 + 150013 CTGCCTTTTCCTCATCCC-CCAGCCAATCAGTTTTCAAATCTTCCATTTTATTTTG i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133482880 55 - 185818997 CTGCCTTTTCCTCATCCC-CCAGCCAATCATCTTTCAAATATTACATTTTATTTCG i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67312566 55 + 192294377 CTGCCTTTTCCTCATCCT-CCAGCCAATCAGCTTTCAAATATTACATTTTATTTCG i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2794485 54 + 3123512 CTGCCTTTT-CTCATCCC-CCAGCCAATCAGCTTTCAAATATTACATTTTATTTCG i macNem1.NW_012011522v1 I 451 C 0 s cerAty1.NW_012000909v1 2514909 55 + 10077455 CTGCCTTTTCCTCATCCC-CCAGCCAATCAATTTTCAAATATTACATTTTATTTCG i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720471 55 + 127223203 CTCCCTTTTCCTCATCCC-CCAGCCAATCAGTTTTCAAATGTTACATTTTATTTCG i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1187774 55 - 1799296 CTGCCTTTTCCTCATCCC-CCAGCCAATCAGCTTTCAAATATTACATTTTATTTCG i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1764647 55 + 6934359 CTGCCTTTTCCTCATCCC-CCAGCCAATCAGTTTTCAAATATTACATTTTATTTCG i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127827 41 - 128169293 CTGC---------------CCAGCCAATCAGTTTTCAAATCTTGCATTTTATTTTG i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744829 41 - 18371965 CTGC---------------CCAGCCAATCCGTTTTCAAATCTTGCATCTTATTGTG i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404511 41 + 3566421 CTGC---------------CCAGCCAATCAGTTTTCAAATCTTGCATTTTATTTTG i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906919 41 - 9267652 CTGC---------------CCAGCCAATCAGTTTTCAAATCTTGCATTTTATTTTG i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776830 56 - 55844845 CTGTTTTTCCCTCATCCCTTCAACTAATTAATTTTCAAATCttttttttttgtttg i canFam3.chr18 C 0 I 52 e nomLeu3.chr19 40179004 12 - 81552678 I a score=110838.000000 s hg38.chr22_KI270732v1_random 29990 16 + 41543 AAAGGTCCTTATCCCC s panTro5.chr2B 114777273 16 - 133216015 AAATGTCCTTATCCCC i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 146014 16 + 150013 AAAGGTCCTTATTCCC i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133482935 16 - 185818997 AAAGGTCGTTATCCCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67312621 16 + 192294377 AAAGGTCGTTATCCCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2794539 16 + 3123512 AAAGGTCGTTATCCCC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2514964 16 + 10077455 AAAGGTCATTATCCCC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720526 16 + 127223203 AAAGGTCGTTATCCCC i chlSab2.chr21 C 0 C 0 s manLeu1.NW_012105809v1 1187829 16 - 1799296 AAAGGTCGTTATCCCC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1764702 16 + 6934359 AAAGGTCGTTATCCCC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127868 16 - 128169293 AAAGGTTATTATCCCC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744870 16 - 18371965 AAAGGTTATTATCCTC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404552 16 + 3566421 AAAGGTTATTCTCCCC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906960 16 - 9267652 AAAGGTTATTATGCCC i aotNan1.NW_018514471v1 C 0 C 0 e canFam3.chr18 51776886 52 - 55844845 I e nomLeu3.chr19 40179004 12 - 81552678 I a score=1865040.000000 s hg38.chr22_KI270732v1_random 30006 274 + 41543 CTAGTCTCTTGTTTCTAGACTTGGCACATA------TTTGTAACGTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC-------------------------------------------CTGCCAAATGTGAACATACAAA----AAATCAGAATGTGGCATTCT---GATTTAAACTGCTTATTAGTTAATACCCTCAAGAT-AACATCTAGGTTCTTAGCTGC-----ACTGAGTCAAGCCTACTTACA------TC---------TTTTTTTGTCTTCGGCTGCACTTTTCCTATCACATCACACTCCAGCAATGCCAA--GCTGTGCGGGCCTTCCACCC s panTro5.chr2B 114777289 281 - 133216015 CTAGTCTCTTGTTTCTAGACTTGGCACATATTTAAGTTTGTTACCTCTATCTACTGACTTTACTCTCTTCAAAC--AGTATCTACGC-------------------------------------------CTGCCAAACGTGAATACAAAAA--ACAAATCAGAATGTGCCATTCT---GATTTAAACTGCTTATTAGTTAATACCCTCAAGAT-AACATCTGGGTT-TTAGCTGC-----ACTGAGTCAAGCCAACTTACA------TC---------TTTCTTTGTCTTTGGATGCACTTTTCCTATCACATCACACTCCAGCAATGCCAA--GTTGTGCTGGCCTCCTACCT i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 146030 273 + 150013 CTAGTCTCTTGTTTCTAGACTTGGCACATA------TTTGTAACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC-------------------------------------------CTGCCAAATGTGAACATACAAA----AAAACAGAATGTGCCATTCT---GATTTAAACTGCTTATTAGTTAATACCCTCAAGAT-AACATCTGGGTTCTTAGCTGC-----AATGAGTCAAGCCTACTTACA------TC---------TTT-TTTGTCTTCAGCTGCACTTTTCCTATCACATCACACTCCAGCAATGCCAA--GCTGTGCGGGCCTTCTACCC i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133482951 293 - 185818997 CCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC-------------------------------------------CTGCCAAATGTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACACCCTCAAGAT-AACATCTGGGTTCTTAGCTGC-----GCTGAGTCAAGCCTACTAACA------TCTTTTTTTTTTTTTTTTGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGCAGTGCCAA--GCTGTGCAGGCTCTCTACCC i rheMac8.chr3 C 0 C 0 s macFas5.chr3 67312637 293 + 192294377 CCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC-------------------------------------------CTGCCAAATGTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACACCCTCAAGAT-AACATCTGGGTTCTTAGCTGC-----GCTGAGTCAAGCCTACTTACA------TCTTTTTTTTTTTTTTTTGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGCAGTGCCAA--GCTGTGCAGGCTCTCTACCC i macFas5.chr3 C 0 C 0 s macNem1.NW_012011522v1 2794555 292 + 3123512 CCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC-------------------------------------------CTGCCAAATGTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACACCCTCAAGAT-AACATCTGGGTTCTTAGCTGC-----GCTGAGTCAAGCCTACTTACA------TC-TTTTTTTTTTTTTTTGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGCAGTGCCAA--GCTGTGCAGGCTCTCTACCC i macNem1.NW_012011522v1 C 0 C 0 s cerAty1.NW_012000909v1 2514980 291 + 10077455 CCAGTCTCTTGTTTCTAGATTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC-------------------------------------------CTGCCAAATGTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACACCCTCAAGAT-AACATCTGGGTTCTTAGCTGC-----ACTTAGTCAAGCCTGCTTACA------TC--TTTTTTTTTTTTTTGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGTAGTGCCAA--GCTGTGCAGGCTCTCTACCC i cerAty1.NW_012000909v1 C 0 C 0 s chlSab2.chr21 5720542 292 + 127223203 CCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCGTCTCTTCAAAC--GGTATCTATGC-------------------------------------------CTGCCAAATGTGAACGTGCGGAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTGAACATCCTCAAGAT-AACATCTGGGTTCTTAGCTGC-----ACTGAGTCAAGCCTGCTTACA------tt-tttttttttttttttGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCGGCAGTGCCAA--GCTGTGCAGGCTTTCTACCC i chlSab2.chr21 C 0 N 0 s manLeu1.NW_012105809v1 1187845 298 - 1799296 CCAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACTGACTTTCCTCTCTTCAAAC--AGTATCTATGC-------------------------------------------CTGCCAAATGTGAACGTACGAAAAACAAATCAGAATCTGACATTCT---GATTTAAACTGCTTATTAGTTAACACCCTCAAGAT-AACATCTGGGTTCTTAGCTGC-----ACTGAGTGAAGCCTGCTTACATCtttttt-tttttttttttttttGTCTTCTGCTGCACTTTTCCTTCCACATCACACTCCAGCAGTGCCAA--GCTGTGCAGGCTCTCTACCC i manLeu1.NW_012105809v1 C 0 C 0 s colAng1.NW_012115910v1 1764718 286 + 6934359 CTAGTCTCTTGTTTCTAGACTTGGCACATATCTAAGTTTGTTACCTCTATCTACCGACTTTCCTCTCTTCAAAC--AGTATCTATGC-------------------------------------------CTGCCAAATGTGAACGTAGGAGAAACAAATCAGAATCTGACATCTT---GATTTAAACTGCTTATTAGTTAACACCCTCAAGAT-AACTTCTGGGTTCTTAGCTGC-----ACTGAGTCAAGCCTGCTTACA------TC-------TCTTTTTTTGTCTTCTGCTGCACTTTTTCTTCCACATCACACTCCAGCAGTGCCAA--GCTGTGCAGGCTTTCTACCC i colAng1.NW_012115910v1 C 0 C 0 s calJac3.chr8 108127884 270 - 128169293 TTAGTCTCTTGCTTCTAGACTTTCTACAGA-CTGACGTTGTTAATTCTATCTACTGACTTCCGTCTCTTCAAAC--ATTATCTATGC-------------------------------------------CTGCCAAATGTGAACATACAGA-----------AATGGCACATTCT---GATTTAAACTG-TTATTAGTTAACACCCTCACAAT-AACATCTGGTTTCTTAGCTGC-----ACTGAGTCAAGCCTGCTCACA------TC----------TTTTCTGCCTTCCGCTTCACTTTTCCTTCCACATCACACTCCAGCAATGCCAA--GCTGTGCAGTCCTTCTACCC i calJac3.chr8 C 0 C 0 s saiBol1.JH378145 744886 268 - 18371965 TTAGTCTCTTGCGTCTAGACTTTATACAGA-CTGAAGTTGTTAATTCTATCTACTGACTTTCATCTCTTCAAAC--ATTATTTATGC-------------------------------------------CTGCCAAATGCGAACATACAAA-----------AACAGCACGTTCT---GATTTAAACTG-TTATTAGTTAACAGCCTCACGAT-AACATCTGGTTTCTTAGCTGC-----ACT--GTTAAGGCTGCTTACA------TC----------TTTTTCACCTTCTGCTTCACTTTTCCTTCCAAGTCACACTCCAACAATGTCAA--GCTGTGCAGTCCTTCTACCC i saiBol1.JH378145 C 0 C 0 s cebCap1.NW_016107540v1 1404568 267 + 3566421 TTAGTCTCTTGCTTCTAGACTTTATACAGA-CTGAA---GTTAATTCTATCTACTGAGTTTCCTCTCTTCAAAC--ATTATCTATGC-------------------------------------------CTGCCAAATGTGAACATACAAA-----------AATGGCACATTGT---GATTGAAACTG-TTATTAGTGAACACCCTCAGGAT-AACATCTGGTGTCTTAGCTGC-----ACTGAGTCAAGCCTGCTCACG------TC----------GTTTTTGCCTTCTGCTTCACTTTTCCTTCCACATCACACCCCAGCAACGCCAA--CCTGGATAGTCCTTCTACCC i cebCap1.NW_016107540v1 C 0 C 0 s aotNan1.NW_018514471v1 1906976 270 - 9267652 TTAGTCTCTTGCTTCTAGACTTTATACAGA-CTAAAGTTGTTAATTCTATCTACTGACTTTCCTCTCTTCAAAC--ATTATCTATGC-------------------------------------------CTGCCAAATGTGAACATACAAA-----------AATGGCACATTCT---GATTTAAACTG-TTACTAGTTAACACCCTCACGGT-AACATCTGGCTTCTTAGCTGC-----ACTGAGTCAAGCCTACTCACA------TC----------GAGTTTGCCTTCTGCTTCACTTTTCCTTCCACATCACACTCCAGCAATGCCAA--GCTGTGCAGTCCTTCTACCC i aotNan1.NW_018514471v1 C 0 C 0 s canFam3.chr18 51776938 327 - 55844845 CTGGATTCTGGTTTCCAGATTTTCCATGTATCCACAAT-ATTACCCCTGCTTTCCGATCTTCCTCTCTTCAAACATATTATCCACACATCTGcaaattaacaaattaacaaattaacaaattaacTCTTACTCTTAAGTAAGAGTATACAAA--ACAAATATGAATATGTCATTCTCCCGATATAAACTC----ATAGCCAAGGGCTTCAAGATAAAAATCTGTGCTCTCAGCTGCCATATACT---TCAAGCTTACCTGCA------TC---------TTTTTCAGTCTCCCAG---ACCCCTCTTTCCATATCATATTCTAGGAATGATGAACACTCCATGGGGCTTTTATTT i canFam3.chr18 I 52 C 0 e nomLeu3.chr19 40179004 12 - 81552678 I a score=94349.000000 s hg38.chr22_KI270732v1_random 30280 15 + 41543 CATCTCCACTATTTT s panTro5.chr2B 114777570 15 - 133216015 CATTTCTCCTATTTT i panTro5.chr2B C 0 C 0 s gorGor5.CYUI01000341v1 146303 15 + 150013 CATCTCCACTATTTT i gorGor5.CYUI01000341v1 C 0 C 0 s rheMac8.chr3 133483244 15 - 185818997 CGTTTCCACTATTTT i rheMac8.chr3 C 0 N 0 s macFas5.chr3 67312930 15 + 192294377 CGTTTCCACTATTTT i macFas5.chr3 C 0 N 0 s macNem1.NW_012011522v1 2794847 15 + 3123512 CGTTTCCACTATTTT i macNem1.NW_012011522v1 C 0 N 0 s cerAty1.NW_012000909v1 2515271 15 + 10077455 CGTTTCCACTATTTT i cerAty1.NW_012000909v1 C 0 N 0 s manLeu1.NW_012105809v1 1188143 15 - 1799296 TGTTTCCACTATTTT i manLeu1.NW_012105809v1 C 0 N 0 s colAng1.NW_012115910v1 1765004 15 + 6934359 CGTTTCCACTATTTT i colAng1.NW_012115910v1 C 0 N 0 s calJac3.chr8 108128154 15 - 128169293 TTTTTCCACTATTTT i calJac3.chr8 C 0 N 0 s saiBol1.JH378145 745154 15 - 18371965 TAATTCCACTATTTT i saiBol1.JH378145 C 0 N 0 s cebCap1.NW_016107540v1 1404835 15 + 3566421 TATTTCCACTATTTT i cebCap1.NW_016107540v1 C 0 N 0 s aotNan1.NW_018514471v1 1907246 15 - 9267652 TATTTCCACTATTTT i aotNan1.NW_018514471v1 C 0 N 0 s canFam3.chr18 51777265 15 - 55844845 TGTTTTCAGTGTATT i canFam3.chr18 C 0 N 0 e nomLeu3.chr19 40179004 12 - 81552678 I a score=1500.000000 s hg38.chr22_KI270732v1_random 30295 5 + 41543 GCCCC s panTro5.chr2B 114777585 5 - 133216015 GCCCC i panTro5.chr2B C 0 I 6 s gorGor5.CYUI01000341v1 146318 5 + 150013 GCCCC i gorGor5.CYUI01000341v1 C 0 C 0 e nomLeu3.chr19 40179004 12 - 81552678 I a score=6450.000000 s hg38.chr22_KI270732v1_random 30300 107 + 41543 CGCTGCCGCGGCTTTTTTCTGCCTTCTCAGCGGCTTTTTGTCGCCACGCCTTTTTACCCCC----------------------GCCGCCGCGACTTTTCGCTCCCCGCC------GCTTTTTTCCCCCGCCGC------------CG s gorGor5.CYUI01000341v1 146323 147 + 150013 CACCGCCGCGGCTTTTTTCCACCTTCTCAGCAGCTTTTTGTCGCCACGGCTTTTTACCCCCGCCGCCGCGGCTTTTCGCCCCGGCCGCCGCGACTTTTCGCTCCCCGCCGCTGCAGCTTTTTGCCCCCGCGGCTTTCTTCCCCCGCC i gorGor5.CYUI01000341v1 C 0 C 0 e panTro5.chr2B 114777590 6 - 133216015 I e nomLeu3.chr19 40179004 12 - 81552678 I a score=28320.000000 s hg38.chr22_KI270732v1_random 30407 163 + 41543 GCCGCGGCTTCTTGCGACTTTTTTCCCCCGCTGCCACGGCTTTTTGCCCCCGCCGCCGC-GACTTTTGTGGATTTTTGCCCCCGCCGCCGCTGATTTTGCCCC-CGCCGACGCGGCTTTTTCCCCCGTCTCAGCGGCTTTCTGCGTCTTTTTGCCCCCGCTGCCG s panTro5.chr2B 114777596 165 - 133216015 GCCGCAGCTTTTTGCGGCTTTTCGCCCCAGCCGCCGCGGCTTTTTGCCTCCGCCGCCGCTGCTTTTTACGGCTTTTCGCCCCGGCCACCGCGGCTTTTTCCCCACGCCGCCGCGGCTTTTTCTCCCGCCGCCGCGGCTTTTTGCTGCTTTTTGCCCCCGCAGCCG i panTro5.chr2B I 6 I 11 s gorGor5.CYUI01000341v1 146470 146 + 150013 GCCGCGGCTTCTTGCGACTTTTTTCCCCAGCTGCCACGGCTTTTTGCCCCCGCCGCGGT-GACTTTTGTGGATTTTTGCCTCCGCTCCCGCTGATTTTGCCC--CGCCGACGCGGCTTTTTCCCCCGTCTCAGCGGCTTTCTGCCGCCA---------------- i gorGor5.CYUI01000341v1 C 0 C 0 e nomLeu3.chr19 40179004 12 - 81552678 I a score=2136.000000 s hg38.chr22_KI270732v1_random 30570 72 + 41543 CGTCTTTTTAGGGCTTTTTGTCCCTGCCGGTACGGCTTATTACCGTCGCGGCTTTTTGCCCCCCAAGTCACG s gorGor5.CYUI01000341v1 146616 50 + 150013 CGGCTTTCTGTGTCTTTTTGCCCCCGCCGGAATGGCTTATTACCGTCG----------------------CA i gorGor5.CYUI01000341v1 C 0 C 0 e panTro5.chr2B 114777761 11 - 133216015 I e nomLeu3.chr19 40179004 12 - 81552678 I a score=14370.000000 s hg38.chr22_KI270732v1_random 30642 71 + 41543 GCTTTTTGCCCCCGCCACCGTGGCTTTTTGCGTTTTTTTTCTCCCCGCTGTCGCGGCTTTTTGCCCCCGCC s panTro5.chr2B 114777772 60 - 133216015 GCTTTTTGCCCCAGCCACCGTGCCTTTTTGC-----------CCCCGCCGCCGCGGCTTTTTGCCCCCGCC i panTro5.chr2B I 11 N 0 s gorGor5.CYUI01000341v1 146666 68 + 150013 GCTTTTTGCCCCCGCCACCGTGGCTTTTTGCGTTTTCCC---CCCCACTGTCGCGGCTTTTTGCCCCCGCC i gorGor5.CYUI01000341v1 C 0 C 0 e nomLeu3.chr19 40179004 12 - 81552678 I a score=9204.000000 s hg38.chr22_KI270732v1_random 30713 156 + 41543 ACCATGGCTTTTGCCGCTGAGGCTTTTTGCACCCACCATTGCAGCTTTTTGCCATCGTGGCTTTTTGCCCCCGCCGCCgcggctttttgcggctttttgcggctttttTCCCCGCAGCCGCGGCTTTTGGCCCCCGC-GCAGCTTTTTACCCCCACC s gorGor5.CYUI01000341v1 146734 126 + 150013 ACCATGGCTTTTGCCAC----------------------TGCAGCTTTTTGCCATCGTGGCTTTTTGCCCCTGCCGCCGCGGCTTTTTGCGGCTTTTTCC---------CCCCGCAGCCGCGGCTTTTGGCCCCCGCTGCGGCTTTTTACCCCCGCC i gorGor5.CYUI01000341v1 C 0 I 31 e nomLeu3.chr19 40179004 12 - 81552678 I a score=0.000000 s hg38.chr22_KI270732v1_random 30869 60 + 41543 GCCGCGGCTTTTTGGCCTAGCCGCCCTAGCTTTTTCccgccgccgccgccgccgccgccg e nomLeu3.chr19 40179004 12 - 81552678 I e gorGor5.CYUI01000341v1 146860 31 + 150013 I a score=21536.000000 s hg38.chr22_KI270732v1_random 30929 352 + 41543 ccgGGGCGGCTTTCTGCTCCCAGCGCCGTGGCTTTTTGCCCCCGCGGCTTTTTCCCCCATCCCCGGGCTTTTTGCCCCCACCGCCGCAGTTTTTTACCCGCGCCGCCGAGGCTTTTTGCTGCCGCGGCTTTTTGCCCCCGCCG-CCGTGTTTTTCTCCCCCATCCCCGCGGCTTTTTGCCTCCGCCGACGAAGCTTTTTGTGGAAATTTGCCCCCGCTCCCGCTGATTTTTGCCCCCGCGCCGCGGCTTTTTGCCCCCACGGCTTTTTTACCCCGTCTCAGCGGCTTTTTGCTGCCGTGGCATTTTTGCCCCCGCCTTTGTGGCTTTTTGCCCCCCGCTGCCGCGGCTTTTTG s gorGor5.CYUI01000341v1 146891 308 + 150013 CCGCGGCGGCTTTCTG-TCCCAGCGCCGT------------------------------------GGCTTTTTGCCCCCACCGCCGCGGTTTTTTACCAGCGCCGCCAAGGCTTTTTGCTGCC-CGGCTTTTTGCCGCCGCCGCCCGTGTTTTT-TCCCCCAT-CCCGTGGCTTTTTGCCCCCGCCGCCACAGCTTTTTGTGGAAATCTGCCCCCGCTCACGCTGA-TTTTGCCCC--CGCCGCGGCTTTTTGCCCCCGCGGCTTTTTTACCCCGTCTCAGCGGTTTTTTGCTGCTGTGGCA-TTTTGCCCCCGCCGTTGTGGCTTTTTG-CCCCCGCTGCCACGGCTTTTTG i gorGor5.CYUI01000341v1 I 31 T 162 e nomLeu3.chr19 40179004 12 - 81552678 I a score=0.000000 s hg38.chr22_KI270732v1_random 31281 52 + 41543 CTCCCGCCTGCGTGGTTTTTTGCCCGCGCTGCCGAGGCTTTTTGCCCCCGCC e nomLeu3.chr19 40179004 12 - 81552678 I e gorGor5.CYUI01000341v1 147199 162 + 150013 T a score=2756.000000 s hg38.chr22_KI270732v1_random 31333 40 + 41543 GACGAAGCTTTTTGGGGAAATTTGCCCCCGCTCCCGCTGA s gorGor5.CYUI01000341v1 147037 40 + 150013 GCCACAGCTTTTTGTGGAAATCTGCCCCCGCTCACGCTGA i gorGor5.CYUI01000341v1 T 162 C 0 e nomLeu3.chr19 40179004 12 - 81552678 I a score=1823.000000 s hg38.chr22_KI270732v1_random 31373 10 + 41543 TTTTTGCCCC s gorGor5.CYUI01000341v1 147077 9 + 150013 TTTT-GCCCC i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chr19 40179016 10 - 81552678 TTTTTGCCCC i nomLeu3.chr19 I 12 C 0 a score=-585.000000 s hg38.chr22_KI270732v1_random 31383 1 + 41543 G-- s nomLeu3.chr19 40179026 3 - 81552678 CGC i nomLeu3.chr19 C 0 C 0 e gorGor5.CYUI01000341v1 147086 0 + 150013 C a score=9680.000000 s hg38.chr22_KI270732v1_random 31384 42 + 41543 CGCCGCGGCTTTTTGCCCCCACGGCTTTTTTACCCCGTCTCA s gorGor5.CYUI01000341v1 147086 42 + 150013 CGCCGCGGCTTTTTGCCCCCGCGGCTTTTTTACCCCGTCTCA i gorGor5.CYUI01000341v1 C 0 I 71 s nomLeu3.chr19 40179029 42 - 81552678 CGCCGCGGGTTTTTGCCGCCACAGCTTTTTTCCCCCGCCTCT i nomLeu3.chr19 C 0 C 0 a score=3420.000000 s hg38.chr22_KI270732v1_random 31426 145 + 41543 GCGGCTTTTTGCTGCCGTGGCATTTTTGCCCCCGCCTTTGTGGCTTTTTGCCCCCCGCTGCCGCGGCTTTTTGCTCCCGCCTGCGTGGTTTTTTGCCCGCGCTGCCGAGGCTTTTTGCCCCCGCCGCGGCGACGTTTTCCCCCCG s nomLeu3.chr19 40179071 98 - 81552678 ACGGC-----------------TTTTTGCCCCCGCGTCCCCGGCTTTTTGCACCCCGCCGCCGCCCCTTTTTGCCCCCGCCGCCGCCCCTTTT------------CGTGGCTTTTTGC------------------TCCCCCTCG i nomLeu3.chr19 C 0 C 0 e gorGor5.CYUI01000341v1 147128 71 + 150013 I a score=23583.000000 s hg38.chr22_KI270732v1_random 31571 143 + 41543 CCGCCGGGGCTTTTTGCTCCCCGCCGCCGCGGCTTTT-GCGCCTTTTTGCCCCTGCCGTCGCGGCTTTTTGCTGCGGCGTTTTG-CCCCCGCTGCCCTGGCTTTCTGCCGCCGCG------GCTTTTTGTGTCTTTTTTCCCCC-GCCGCCG s gorGor5.CYUI01000341v1 147199 142 + 150013 CCGCCGCGGCTTTTTGCTCCCCGCCGC-GCGGCTTTT-GCGCCTTTTTGCCCCTGCCGTCGTGGCTTTTTGCTGCGGCCTTTTG-CCCCCGCTGCCCTGGCTTTCGGCCGCCGCG------GCTTTTTGTGTCTTTTTGCCCCC-GCTGCCA i gorGor5.CYUI01000341v1 I 71 I 143 s nomLeu3.chr19 40179169 146 - 81552678 ---CCGCGGATTTTTGCTCCCCGCCGCCGCCGCTTTTCCCGGCTTTTGCCCCCAGCCGCCGCGGCCTTT---CCTGGCTTTTTGCCCCCCGCCGCGGCGGTTTTTTGTCCCCGCGCCCGCCGCTTTTCGCGCCTTTTTGCCCCCTGCCCCCG i nomLeu3.chr19 C 0 C 0 a score=20570.000000 s hg38.chr22_KI270732v1_random 31714 156 + 41543 CGGCTTTTGG----CCCCCGCCGCCGCTTTTTGCCAACGTGGCTTTTTGGCCTAACCGC----CCTGGCTTTTTA-CCCCTGCCGCCGAGGCTTTTTGCCGCCGCAGCTTTTTGCCCCCAG-CGCTATGGCTTTTTGACCGCGCCGCCCAGGCTTTTTGCTGTCGC s gorGor5.CYUI01000341v1 147484 154 + 150013 CGGCTTTTG------CCCCTCCGCGGCTTTTTGCCAACGTGGCTTTTTGGCCTAGCCGC----CCTGGCTTTTTA-CCCCTGCCGCCGAGGCTTTTTGCCGCCGCGGCTTTTTGCCCCCAG-CGCTGTCGCTTTTTGACCGCGCCGCCCAGGCTTTTTGCTGCCGT i gorGor5.CYUI01000341v1 I 143 I 115 s nomLeu3.chr19 40179315 135 - 81552678 CGGCTTTTTGTCCCCCACCGCCGCTGCTTTTTGTCCCCGCGGCC----------GCCGCTTTTCCCGGCTTTTTGCCCCCCGCCGCCGCGGCTTTT------CCTGGCTTTTTGCCCCCCGCCGCCGCGGCTTTTTGTCC------CCCA---------CCGCCGC i nomLeu3.chr19 C 0 C 0 a score=10957.000000 s hg38.chr22_KI270732v1_random 31870 105 + 41543 GGCTTTTTGCCCCCGCGGCTTTTTTGCCCCGTCTCAGCGGCTTTTTGCTGCCGTGGCATTTTGCCCCCGCCGTTGTGGCTTTTTGCCCCCCGCTGCCGTGGCTTT s gorGor5.CYUI01000341v1 147753 83 + 150013 GGCTTTTTGCCCCCGCGGCTTTTTTGCCCCGTCTCAGCGGCTTTTTGCTGCCA----------------------TGGCTTTTTGCCTCTCGCTGCCGCGACTTT i gorGor5.CYUI01000341v1 I 115 C 0 s nomLeu3.chr19 40179450 65 - 81552678 TGCTTTTTGTcccc------------cgccgccgccgccgcTTTTCC----------------------------CGGCTTTTTGCCCCCCGCCGCCGCGGCTCT i nomLeu3.chr19 C 0 N 0 a score=1855.000000 s hg38.chr22_KI270732v1_random 31975 19 + 41543 TTGCTCCCGCCGGCGTGGT s gorGor5.CYUI01000341v1 147836 19 + 150013 TTGCTCCCGCCGGCGTGGT i gorGor5.CYUI01000341v1 C 0 I 102 a score=21049.000000 s hg38.chr22_KI270732v1_random 31994 244 + 41543 TTTTTGCCCCCGCTGTCCTGACTTTTTGGCGCCGTGGCTTTTTGCGCCCTGCCACCACGGCTTTTTTCTCCCCGCCGCCGGGACTTTTTGACCCCGC-------------------------------------CGCGGAATTGGGGGCTGTCAGTGCCCAGGAGGACAGAGGAGGCCACGGTGATGACCTGTACGCTGTGCCACACAGAAATCAGGTGTTTTCTGTGTTCCCAGTTTTCTTCTTGACATTCACCCTGATGTTAACTTTTGGTAAATTAGT s gorGor5.CYUI01000341v1 147957 281 + 150013 TTTTTGCCCCCGCTGCCCTGACTTTTTGGTGCCTTGGCTTTTTGCGCCCTGCCACCACGGCTTTTTTCTCCCCGCCGCCGGGACTTTTTGACCCCGCGGCCGCAGCTTTTTGCCGCTGCGGCTTTTTGCCCCCCCGCGGAATTGGGGACTGTCAGTGCCCAGGAGGGCAGAGGAGGCCACGGTGATGACCTGTACGCTGTGCCACACAGAAATCAGGTGTTTTCTGTGTTCCCAGTTTTCTTCTTGACATTCACCCTGATGTTAACTTTTGGTAAATTAGC i gorGor5.CYUI01000341v1 I 102 C 0 a score=1795.000000 s hg38.chr22_KI270732v1_random 32238 8 + 41543 GCCTTGCT s gorGor5.CYUI01000341v1 148238 8 + 150013 GCCTTGCT i gorGor5.CYUI01000341v1 C 0 C 0 s tarSyr2.KE938705v1 108855 8 + 369857 GCtttgtt i tarSyr2.KE938705v1 N 0 N 0 a score=9045.000000 s hg38.chr22_KI270732v1_random 32246 103 + 41543 AAGGATTTCTTCTCTCTATTCTGCATTTGATAGCATTTGCTTTGGGGCTTATTTTTTTAAACGTGTGCCAGCCTCATTTCTATCTGGTTAGATTAAAACAAAC s gorGor5.CYUI01000341v1 148246 102 + 150013 GAGGATTTCTTCTCTCTATTCTGCATTTGATAGCATTTGCTTTGGGGCTTATTTTTTTAAACGTGT-CCAGCCTCATTTCTATCTGGTTAGATTAAAACAAAC i gorGor5.CYUI01000341v1 C 0 C 0 a score=7378.000000 s hg38.chr22_KI270732v1_random 32349 56 + 41543 TTCTTTCCTTTAACTTGCAAAAACAGAG-------ATGAACATCTTCATATTGTTAATGTGGA s gorGor5.CYUI01000341v1 148348 56 + 150013 TTCTTTCCTTTAACTTGCAAAAGCAGAG-------ATGAACATCTTCATATTGTTAATGTGGA i gorGor5.CYUI01000341v1 C 0 C 0 s canFam3.chr31 28870014 62 - 39895921 TTTTTTTTTGTAACTTTCAACATTAAGGTAGTCATATGAACA-CTATATATAGTCATTATCAA i canFam3.chr31 N 0 C 0 a score=373.000000 s hg38.chr22_KI270732v1_random 32405 8 + 41543 -------CTTC----CATT s gorGor5.CYUI01000341v1 148404 8 + 150013 -------CTTC----CATT i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 1949 8 - 27701 -------CTTT----CACT i nomLeu3.chrUn_GL398098_1 N 0 I 1 s canFam3.chr31 28870076 19 - 39895921 TCTGAAGGTTTAAGGTATT i canFam3.chr31 C 0 C 0 a score=2317.000000 s hg38.chr22_KI270732v1_random 32413 12 + 41543 ------------CACAGCTTAGCA s gorGor5.CYUI01000341v1 148412 12 + 150013 ------------CACAGCTTAGCA i gorGor5.CYUI01000341v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 1958 12 - 27701 ------------CACATCCAATCT i nomLeu3.chrUn_GL398098_1 I 1 C 0 s macFas5.chr2 261229 12 - 192460366 ------------CATAGCCAATCT i macFas5.chr2 N 0 C 0 s canFam3.chr31 28870095 24 - 39895921 CTCTGCTTAGGGAATAGCAAATCT i canFam3.chr31 C 0 C 0 a score=17402.000000 s hg38.chr22_KI270732v1_random 32425 2 + 41543 AT s panPan2.chr3 77923810 2 + 205426864 AT i panPan2.chr3 N 0 C 0 s gorGor5.CYUI01000341v1 148424 2 + 150013 AT i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255065 2 + 20583478 AT i ponAbe2.chr3_random N 0 C 0 s nomLeu3.chrUn_GL398098_1 1970 2 - 27701 AT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204359433 2 - 204787373 AT i rheMac8.chr2 N 0 C 0 s macFas5.chr2 261241 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 279688 2 - 11645122 AT i macNem1.NW_012010856v1 N 0 C 0 s cerAty1.NW_012001605v1 261061 2 - 6739814 AT i cerAty1.NW_012001605v1 N 0 C 0 s chlSab2.chr22 151446 2 - 101219884 AT i chlSab2.chr22 N 0 C 0 s manLeu1.NW_012099043v1 271664 2 - 785044 AT i manLeu1.NW_012099043v1 N 0 C 0 s colAng1.NW_012123820v1 171045 2 - 10971483 AT i colAng1.NW_012123820v1 N 0 C 0 s calJac3.chr21 32794766 2 - 50472720 AT i calJac3.chr21 N 0 C 0 s saiBol1.JH378168 11007788 2 - 13128814 AC i saiBol1.JH378168 N 0 C 0 s canFam3.chr31 28870119 2 - 39895921 AT i canFam3.chr31 C 0 C 0 a score=191396.000000 s hg38.chr22_KI270732v1_random 32427 17 + 41543 TTTATGGGCAGAAGAGC s panPan2.chr3 77923812 17 + 205426864 TTTATGTGCAGAAGAGC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 148426 17 + 150013 TTTATGGGCAGAAGAGC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255067 17 + 20583478 TTTATGGGCAGAAGAGC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 1972 17 - 27701 TTTATGGGCAGAAGAGC i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204359435 17 - 204787373 TTTATGGGCAGAAGAGC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 261243 17 - 192460366 TTTATGGGCAGAAGAGC i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 279690 17 - 11645122 TTTATGGGCAGAAGAGC i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 261063 17 - 6739814 TTTATGGGCAGAAGAGC i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 151448 17 - 101219884 TTTATGGGCAGAAGAGC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 271666 17 - 785044 TTTATGGGCAGAAGAGC i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 171047 17 - 10971483 TTTATGGGCAGAAGAGC i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32794768 17 - 50472720 TTTCTGGGCAGAAAAGC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11007790 17 - 13128814 TTTGTGGGCAGAAAAGC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7749055 17 + 14377064 TTTGTGGGCAGAAAAGC i cebCap1.NW_016107322v1 N 0 C 0 s aotNan1.NW_018487195v1 4210360 17 - 9889416 TTTGTGGGCAGAAAAGC i aotNan1.NW_018487195v1 N 0 C 0 s canFam3.chr31 28870121 16 - 39895921 TTTATGAG-AGAAGAGC i canFam3.chr31 C 0 C 0 a score=6914856.000000 s hg38.chr22_KI270732v1_random 32444 634 + 41543 ACAATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTATTTTAATCTTTAAAGAGCAATAGGT-ACAAGTAAAAGTACATAC-ATAAAGTAGGTATTTAATATTTAATTTTTATTCTCATATGCAT--GAAAAGGGTGTTCCAAAAAAAGA--------------------------------GAAGTCCATGGCATGTCTTTATGGTTAATCTTACTTTATTTTTTGGTTCATCTACCATGCTTCTTACAAGTT----GTTTTTTCTTTCATG--AAAATTTTTTTTAAATGAATTGATTTTACTTTTCATCAGCACAACTGTTGACTAATACCAAAGTTAGCTAGAAGGCTATGATTTTTATATTTATAGAATGGCAGGGGCAGCATTCAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACATCAACTCAGAG--GAAGGTT-------TTTTTAAATTATAATAACATTTTGAAAACCATCTGTCCATTAAAATGTTACTAAAATATGTATTGGAACTGGTGTTTTAGATG-CCAGTCCTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTATATAAAATAGTAAAAATTCTGCCTTTTAAATTGACTACTGGATGTAGGTAAGAAGAA-GTTAAGTAAA-TATTACATAAA-A s panPan2.chr3 77923829 651 + 205426864 ACAATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTATTTTAATCTTTAAAGAGCAATAGGT-ACAAGTAAAAGTACATAC-ATAAAGTAGGTATTTAATATTTAATTTTTATTCTCATATGCAC--GAAAAGGGTGTTCCAAAAGAAGATTAGA---------------------------GAAGTCCATGGCATGTCTTTATGGTTAACGTTACTTTATGTTTTGGTTCATCTACCATGCTTCTTACAAATTACTTGTTTTATCTTTCATG--GAAAATTTTTTTAAATGAATTGAGTTTACTTTTCATCAGCACAATTGTTGACTAATACCAAAGTTAGTTAGAAGGTTATGATTTTTATATTTATAGAATGGCAGGGGCAGCATTTAGATTATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACATCAACTCAGAGAGGAAGGTTACA-TTTTTTTTAAATTATAATAACATTTTGAAAACCATCTGTCCTTTAAAATGTTATTAAAATATATATTGGAACTGGTGTTTTAGATG-CCAGTCGTTCCTGAAAAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTATATAAAATAGTAAAAATTCTGCCTTTTAAAATGACTACTGGATGTAGGTAAGAAGAA-GTTAAGGAAC-TATTACATAAA-A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 148443 629 + 150013 ACAATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTAT-------TTTAAAGAGCAATAGGT-ACAAGTAAAAGTACATAC-ATAAAGTAGGTATTTAATATGTAATTTTTATTCTCATATGCAT--GAAAAGGGTGTTCCAAAAAAAGA--------------------------------GAAGTCCATGGTATGTCTTTATGGTTAATCTTACTTTATTTTTTGGTTCATCTACCATGCTTCTTACAAGTTACTTGTTTTTT-TTTCATG-AAAAATTTTTTTTAAATGAATTGATTTTACTTTTCATCAGCACAACTGTTGACTAATACCAAAGTTAGCTAGAAGGCTATGATTTTTATATTTATAGAATGGCAGGGGCAGCATTCAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACATCAACTCAG----GAAGATT-------TTTTTTAATTATAATAACATTTTGAAAACCATCTGTCCATTAAAATGTTACTAAAATATGTATTGGAACTGGTGTTTTAGATG-CCAGTCCTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTATATAAAATAGTAAAAATTCTGCCTTTTAAAATGACTACTGGATGTAGGTAAGAAGAA-GTTAAGGAAA-TATTACATAAA-A i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255084 652 + 20583478 ACAATGGGCTGAACTATCCA-----GGCT---TTAGGAGTTATTTTAATCTTTAAAGAGCAATAGGT-ACAAGTAAAAGTACAAAC-ATAAAGTAGGCatttaatatttaatttttattCTCATCTGCAT--GAAAAGGGTGTTCCAAAAAAAGATGAGA---------------------------GAAGTCCATGGCATGTCCTTATGGTTCATGTTACTTTATTTTTTGGTTCATCTACCATGCTTCTTACAAGTTACTTGTTTTTTCTTTCATGGAAAATTTTTTTTTAAATGAATTGATTTTACTTTTCATCAGCACAATTGTTGACTAATACCAAAGTTAGTTAGGAGGTTATGATTTTTATATTTATAGAATGGCAGGAGCAGCATTTAGATCATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACATCAACTCAGAGAGGAAGGTTACA-TT-TTTTAAAATTATAATAACATTTTGAAAACCATCTGTCCTTTAAAATGTTACTAAAATATATATTGGAACTGGTGTTTTAGATG-CCAGTCCTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTTTATATAAAATAGTAAAAATTCTGCCTTTTAAAATGACCACTGGATGTAGGTAAGAAGAA-GTTAAGGAAA-TATTACATAAA-A i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 1989 644 - 27701 ACAATGGGCTCAGTTATCCA-----GGCT---TTAGGAGTTATTTTAATTTTTAAAGAACAATAG------AATAAAAGTACATAC-ATAAAGTAGGTATTTTATATTTAATTTTTATTTTCATATGCAT--GAAAAGGGTGTTCCAAAAAAAGATTACA---------------------------GAAGTCCATGGCATGTCTTTCTGGTTAATGTTACCTTATTTTTTGGTTCATCTACCATACTCCTTACAAGTTACTTGTTTTT--TTTCATG-GAAAATTTTTTTTAAATGAACTGATTTTACTTTTCATCAGCACAGTTGTTGACTAATACCAAAGTTAGTTAGAAGGTTATGATTTTTATATTTATAGAATGGCAGGGGGAGCATTTAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACATGAACTCAGAGAGGAAGGTTACA-TT-TTTTTAAATTATAATAACATTTTGAAAACCATCTGTCCTTGAAAATGTTACTAAAATATATATTGGAACTGGTGTTTTAGATG-CCAGTCCTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTATATAAAATAGTAAAAATTCTGCCTTGTAAAATGACTACTGGATGTAGGTAAGAAGTA-GTTAAGGAAA-TATTACATAAA-A i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204359452 650 - 204787373 ACAATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTATTTTAATCTTTAAAGAGCAATAGAT-ACAAGTGAAAGTACATAC-ATAAAGTAGGTATTTAGTATTTAATTTTTATTCTCATATGCAT--GAAAAGGGTGTTCCAAAACAAGATTAGA---------------------------GAAGTCCATGGCATGTCTTTGTGGTTAATGTTACTTTATTTATTGGTTCATCTACCGTGCTTCTTATAAGTTACTTGTTTTTTCTTTCATG-GAAAAATTGTTTTAAATGAATTGATTTTACTTTTCATCAGCACAATTGTTGACTAATACCAAAGTTAGTTAGGAGGTTATGGTTTTTATATTTATAGAATGGCAGGGACAGCATTTAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACGTCAACTCAGAGAGGAAGGTTACA-TT-TTTTTAAATTATAATAATATTTTGAAAGCCATCTGTCCTTTAAAATGCTGCTAAAATATATGTTGGCACTGGTGTTTTATATG-CCAATACTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTAGATAAAATAGTAAAAATTATGCCTT-TACAATGACTACTGAATGTAGATGAGAAGAA-GTTAAGGAAA-TATTACATAAA-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 261260 650 - 192460366 ACAATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTATTTTAATCTTTAAAGAGCAATAGAT-ACAAGTGAAAGTACATAC-ATAAAGTAGGTATTTAGTATTTAATTTTTATTCTCATATGCAT--GAAAAGGGTGTTCCAAAACAAGATTAGA---------------------------GAAGTCCATGGCATGTCTTTGTGGTTAATGTTACTTTATTTATTGGTTCATCTACCGTGCTTCTTATAAGTTACTTGTTTTTTCTTTCATG-GAAAAATTGTTTTAAATGAATTGATTTTACTTTTCATCAGCACAATTGTTGACTAATACCAAAGTTAGTTAGGAGGTTATGGTTTTTATATTTATAGAATGGCAGGGACAGCATTTAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACGTCAACTCAGAGAGGAAGGTTACA-TT-TTTTTAAATTATAATAATATTTTGAAAGCCATCTGTCCTTTAAAATGCTGCTAAAATATATGTTGGCACTGGTGTTTTATATG-CCAATACTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTAGATAAAATAGTAAAAATTATGCCTT-TACAATGACTACTGAATGTAGATGAGAAGAA-GTTAAGGAAA-TATTACATAAA-A i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 279707 647 - 11645122 ACAATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTATTTTAATCTTTAAAGAGCAATAGAT-ACAAGTGAAAGTACATAC-ATGAAGTAGGTATTTAGTATTTAATTTTTATTCTCATATGCAT--GAAAAGGGTGTTCCAAAACAAGATTAGA---------------------------GAAGTCCATGGCATGTCTTTGTGGTTAATGTTACTTTATTTATTGGTTCATCTACCGTGCTTCTTATAAGTTACTTGTTTTTTCTTTCATG-GAAAAATTGTTTTAAATGAATTGATTTTACTTTTCATCAGCACAATTGTTGACTAATACCAA----AGTTAGGAGGTTATGGTTTTTATATTTATAGAATGGCAGGGACAGCATTTAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACGTCAACTCAGAGAGGAAGGTTACATTT-TTTTTAAATTATAATAATATTTTGAAAGCCATCTGTCCTTTAAAATGCTGCTAAAATATATGTTGGAACTGGTGTTTTATATG-CCAATACTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTAGATAAAATAGTAAAAATTATGCCTT-TACAATGACTACTGAATGTAGATGAGAATAA-GTTAAGGAAA-TATTACATAAA-A i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 261080 648 - 6739814 ACAATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTATTTTAATCTTTAAAGAGCAATAGAT-ACAAGTGAAAGTACATAC-ATAAAGTAGGTATTTAGTATTTAATTTTTATTCTCATATGCAT--GAAAAGGGTGTTCCAAAACAAGATTAGA---------------------------GAAGTCCATGGCATGTTTTTGTGGTTAATGTTACTTTATTTATTGGTTCATCTACCGTGCTTCTTATAAGTTACTTGTTTTTTCTTTCATG-GAAAAATTGTTTTAAATGAATTGATTTTACTTTTCATCAGCACAATTGTTGACTAATACCAAAGTTAGTTAGGAGATTATGGTTTTTATATTTATAGAATGGCAGGGACAGCATTTAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACGTCAACTC--AGAGGAAGGTTACA-TT-TTTTTAAATTATAATAAGATTTTGAAAGCCATCTGTCCTTTAAAATGCTGCTAAAATATATGTTGGAACTGGTGTTTTATATG-CCAATACTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTAGATAAAATAGTAAAAATTATGCCTT-TAAAATGACTACTGAATGTAGATAAGAAGAA-GTTAAGGAAA-TATTACATAAA-A i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 151465 650 - 101219884 ACAATGGGCTCAACTATCCA-----GACT---TTAGGAGTTGTTTTAATCTTTAAAGAGCAATAGAT-ACAAGTGAAAGTACATGC-ATAAAGTAGGTATTTAGTATTTAATTTTTATTCTCATATGCAT--GAAAAGGGTGTTCCAAAACAAGATTAGA---------------------------GAAGTCCATGGCATGTCTTTATGGTTAATGTTACTTTATTTATTGGTTCATCTACCGTGCTTCTTATAAGTTACTTGTTTTTTCTTTCATG-GAAAATTTGTTTTAAATGAATTGATTTTACTTTTCATCAGCACAATTGTTGACTAATACCAAAGTTAGTTAGGAGGTTATGGTTTTTATATTTATAGAATGGCAAGGACAGCATTTAGATAATACATCATAGTAACTTGGCATTTATGAAATACTAGTTTTCCATAAACGTCAACTCAGAGAGGAAGGTTACA-TT-TTTTAAAATTATAATAATATTTTGAAAACCATCTGTCCTTTAAAATGCTGCTAAAATATATGTTGGAACTGGTGTTTTATATG-CCAATACTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTAGATAAAATAGTAAAAATTATGCCTT-TAAAATGACTACTGAATGTAGGTAAGAAGAA-GTTAAGGAAA-TATTACATAAA-A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 271683 650 - 785044 ACAATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTATTTTAATCTTTAAAGAGCAATAGAT-ACAAGTGAAAGTACATAC-ATAAAGTAGGTATTTAGTATTTAATTTTTATTCTCATATGCAT--GAAAAGGGTGTTCCAAAACAAGATTAGA---------------------------GAAGTCCATGGCATGTCTTTGTGGTTAATGTTACTTTATTTATTGGTTCATCTACCGTGCTTCTTATAAGTTACTTGTTTTTTCTTTCATG-GAAAAATTGTTTTAAATGAATTGATTTTACTTTTCATCAGCACAATTGTTGACTCATACCAAAGTTAGTTAGGAGGTTATGGTTTTTATATTTATAGAATGGCAGGGACAGCATTTAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACGTCAACTCAGAGAGGAAGGTTACT-TT-TTTTTACATTATAATAATATTTTGAAAGCCATCTGTCCTTTAAAATGCTGCTAAAATATATGTTGGAACTGGTGTTTTATATG-CCAATACTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTAGATAAAATAGTAAAAATTATGCCTT-TAAAATGACTACTGAATGTAGATAAGAAGAA-GTTAAGGAAA-TATTACATAAA-A i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 171064 650 - 10971483 AGGGTGGGCTCAACTATCCA-----GGCT---TGAGGAGTTACTGTAATCTTTAAAGAGCAATAGAT-ACAAGTGAAAGTACATAC-ATAAAGTAGGTATTTAGTATTGAATTTTTATCCTCATATGCAT--GAAAAGGGTGTTCCAAAACAAGGTTAGA---------------------------GAAGCCCATGGCATGTCTTGATGGTTAATGTTACTTTGGTTTTTGGTTCCTCTGCCGTGCTTCTTATAAGTTACGTGTTTTCTCTTTCATG-GAACAATTGTTTTAAATGAATTGATTTTACTTTTCATCAGCACAATTGTTGACTAATACCAAAGTTAGTCAGGAGGTTATGGTTTTTATATTTATAGAATGGCAGGGACAGCATTTAGATAATACATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACATCAACTCAGAGAGGAAGGTTACG-TT-TTTTAAAATTATAATAATATTTTGAAAACCATCTGTCCTTTAAAATGCTGCTAAAATATATATTGGAACTGGTGTTTTATATG-CCAATCCTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTATATAAAATAGTAAAAATTATGCCTT-TAAAATGACTACTGAATGTAGGTAAGAAGAA-GTTTAGGAAA-TGTTACATAAA-A i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32794785 641 - 50472720 ACAATGGGCTCAACTATCTA-----GGCT---TTAGGAGTTATTCTAATCTTTAAGGAGCAATAGTT-ACACGTAAAAGTACATAC-ATAAAGTAGGTATTTAGTATTTAATTTTTACTATCATATGCAT--GAAAAGTGTGTTCCAAAACAAGATTAGA---------------------------AAAGTTCATGGAATGTCTTCATAGTTCATGTTACTTTATTTTCTAGTTCATCAACTATGCTTCTTACACGTTATTTATTCTTTCTTTCATG-GAAAA--TATTTTTAATGAATTGATTTTACTTTACATGAGCACAGATGTTGACTAATACCAGAGTTACTTAGAAAGTTATGATTTTTATATTTATAGAGTAGCAGGGACAGCATCTAGATAAT-----ATAGTAACTTGGCACTTATGCAATATTAGTTTTTTTTCCACATCAACTCAGAGGGGAAGGTTACA--T-TATTTAAATTATAATAACATTTTGAAAACCATCTGTCCTTTAAAATGTTACTAAAATACAT------ACTGGTGTTTTATATGCCCAATCTTTTCTGAAGAGTGTTTTGAGATTTTTTTTTCAATACTGCCTCAGTTCTATATACAATGCTAAAAATCCTGCCTTTTCAAATGACTACTGGGTGTAAGGTAGAAGAAGGTTAAGAAAATTATTACGTAAAA- i calJac3.chr21 C 0 I 596 s saiBol1.JH378168 11007807 634 - 13128814 AC-ATGGGCTCAACTATCCA-----GGCT---TTAGGAGTTATTCTAATCTTTAAGGAGCAATAGTT-ACAAGTGAAAGTACATAC-ATAAAGTAGGTATTTAGTATTTAATTTTTATTATCATATGCAT--GAAAAAGGTGTTCCAAATCAAGATTAGA---------------------------AAAGTCCATGACATGTCTTCATAGTTCATGTTATTTTATTTTCTAGTTCATCTACCATGCTTCTTACAAGTTATTTGTTTTTTCTTACATG-GAAAA--TTTTTTTAATGAATTGATTTTACATTACATGAGCACAGATGTTGACTAATACCAAAGTTACTTAGAAGGTTATGATTTTTGTATTTATAGAGTAGCAGGGATAGCATTTAGATAATATATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCATCGACATCAACTCAGAGAGGAAGGTTACA--T-TTTTTAAATTATAATAACATTTTGAAAACCATCTGTCCTTTAAAATGTTACTGAAATATAT------ACTGGTGTTTTATATG-CCAATCCTTCCTGAAGAGCGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCT------AATTGTAAAAATTCTGCCTTTTGAAATGACTACTGGGTGTAGGTAAGAAGAA-GTTAAGGAAA-TATTAAATAAA-- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7749072 640 + 14377064 ACAATGGGCTCAACTATCTA-----GGCT---TTAGGAGTTATTCTAATCTTTAAGGAGCAATAGTT-ACAAGTAAAAGTACATAC-ATAAAGTAGGCATTTAGTATTTAATTTTTATTATCATATGCAT--GAAAATGGTGTTCTAAAACAAGATTAGA---------------------------AAAGTCCATGGCGTGTCTTCATAGTTCATGTTACTTTATTTTCTAGTTCATCTACCATACGTCTTACCAGTTATTTGTTTTTTCTTTCATG-GAAAA--T-TTTTTAACGCATTGATTTTACTTTACATGAGTACAGATGTTGACTAATACCAAAGTGACTTAGAAAGTTATGatttttatatttatagagtagcagggacagcatttagataatatatcatagtaacttggcatttataaaatattagttttccatcaacataaactcggAGAGGAAGGTTACA--T-TTTTTAAATTATAATAACATTTTGAAAACCATCTGTCCTTTAAAATGTTACTAAAATATAT------ACTGGTGTTTTATATG-CCAATCCTTCCTGAAGAGCGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTATATACAATGGTAAAAATTCTGCCTTTTGAAATGACTACTGGGTGTAGGTAAGAAGAA-GTTAAGGAAA-TATTACATAAA-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4210377 641 - 9889416 ACAATGGGCTCAACTATCTA-----GGCT---TTAGGAGTTATTCTAATCTTTAAGGAGCAATGGTT-ACAAGTAAAAGTACATAC-ATAAAGTAGTTATTTAGTATTTAAATTTTATTATCATATGCAT--GAAAAGGGTGTTCCAAAACAAGATTAGA---------------------------AAAGTCCATGGCATGTCTTCATAGTTCATGTTACTTTATTTTCTAGTTCATCCACCATGCTTCTTACAAGTTATTTGTTCTTTCTTTCATG-GAAAA--TATTTTTAATGAATTGATTTTACTTTACATGAGCACAGATGTTGACTAATACCAAAGTTACTTAGAAGGTTATGATTTTTATATTTATAGAGTAGCAGGGACAGCATTTAGATAATATATCATAGTAACTTGGCATTTATGAAATATTAGTTTTCCACCAACATCAACTCAGAGAGGAAGGTTACA--T-TTTTTAAATTATAATAACATTTTGAAAACCATCTGTCCTTTAAAATGTTACTAAAATATAT------ACTGGTGTTTTATATG-CCAATCCTTCCTGAAGAGTGTTTTGAGA-TTTTTTTCAAATACTGCCTCAGTTCTATATACAATGGTAAAAATTCTGCCTTTTGAAAAGACTACTGGGTGTAGGTAAGAAGAA-GTTAAGGAAA-TATTACATAAA-- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20834650 673 + 38779656 ATATTTGGCCCAATTATTCA-----TGCT---TTAGGACTTGTTCTAATCTTTAATGAGCAGTAG-T-ACAAGT-AAAGCATGTACAATAAAGTAGGCATTTAGTGTTTAGTTTTCATTCTCATATGCATTCAAAAAAAGCATTCCaaaaaaaaaaaacaaaaaaaaaaacacaaaaCTATTTTTTTGAAGCCCCTGTCATATCTTTATGGTAAATGTTACTCTATTTTCTAGTTCATCTAGCA-ACCCTTTTCTAGTCATTTGGTTTTTCTTTCATA-TTAATTTT--TT-AAATAGATGGTTTTAACCTTCTATGAGTACAGTTATTGATTAATAGCCAAATAACTTAGAAAGTTATGATTTTTATATTTATAGAATGGCAAGGATGGCATAAAGATAATATATCTTAGTAACTTGGCATTTATGAAATATTAGTTTTCCATAAACATCAATTCAGAGAGGAAGGTTACA-TT-TCTTTTCATTATAATAACATTTTGAAGGCCATCTGTTCTTTAAAATCATACTAAAATATATAGTGGAGTTGGCGTTTTATAGC-CCAATCCTTCCTGAAGAGCATTTTAAGA---TTTTTCAAATACTGCCTCAGTTCTACCTAGAATAATTGAAAATATGCCTTGTAGAATGATTACTATGTGTAGGTTAGCAGAA-GGTCAGGAAA-TAGTGCCAAAA-A i otoGar3.GL873528 N 0 C 0 s canFam3.chr31 28870137 578 - 39895921 ACAGTGGACTCAATTATCCACAATGGACTCAATTAGGACTTACTCTAATCTTTAAAGAGTAACAAGTAACAGGTAAAAGTACTTAAAATAAAGACAATATTTCTCATCTATTTTATAATGTTAAATGCAT--GAAAAGAGTGTTATAAAAAAGATTTAGA---------------------------GAATTCCATGGCATGTTTTTATGGTAAATGTTACTTTATTTTCTGGTTCATCTAACATACCCTTTTTTAGTTATTTTGTTTTTCTTTCATA-AA------------AATGTATTGATTTTACATTATGTGAGCAC---------TTTATATGAAAGTT--TCATAAAGATATGATTCTTGTATTCATAGAATGGTAGGAATAGCATATAGATGA-----CATAGTAACTTGGCATTTATAAAATATTAGCTTTCCATAAACATCAACTCAGAGGGGAAGGGTGCATTT-TCTTTTGATTATAACAACAATTCGAAAGGCATCTGCTTTTTAAAATTTTACTAAAATATATAGTGGAAATAGTGTTTTACGTG-CCAGTCCCTTCTGAAGAGAGTTTTTAGA---TTTTTCAAATACTGCCTCGAATTTATGTAGAAT------ATATGTATTTTTTAAAA--------------------------------------------------- i canFam3.chr31 C 0 C 0 a score=1127302.000000 s hg38.chr22_KI270732v1_random 33078 139 + 41543 ATAAATTTGCAAAAGTAATTTACTCAAGGA--TTATTTACACTTTGATGAGTGGATCTGGATATTTTGATACTAAGT-GAAAGTGGTTCCCCTATAATTATAAGGGAACAAATATCTGCAAG-TAGTAGTTAAAAGAATGTa-t s panPan2.chr3 77924480 139 + 205426864 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTATTTACACTTTGATGAGTGGATCTGGATATTTTGATACTAAAT-GAAAGTGGTTCCACTATAATTATAAGAGAACAAAGATCTGCAAG-TAGTAATTAAAAGAATGTG-T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149072 133 + 150013 ATAAATTTGCAAAAGTAATTTACTCTAGGA--TTATTTACACTTTGATGAGTGGATCTGGATATTTTGATACTAAGT-GAAAGTGGTTCCCC------TATAAGGGAATGAATATCTGCAAG-TAGTAGTTAAAAGAATGTa-t i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255736 139 + 20583478 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTATTTACACTTTGATGAGTGGATCTGGATATTTTGATACTAAGT-GAAAGTGGTTCCACTCTAATTATAAGGGAACAAAGATCTGCAAG-TAGTAGTTAAAAGAATGTG-T i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2633 139 - 27701 ATAGATTTGCAGAGGTAATTTACTGAAGTA--TTATTTACACTTTGATGAGTGGATCTGGATATTTTGATACTAAGT-GAAAGTGGTTCCACTGGAATCAGAAGGGAACAGAGATCTGCAAG-CAGGAGTGAAAAGAATGTa-t i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360102 140 - 204787373 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTATTTATAATTTGATGGGTGGATCTGGATATTTTGATACTAAGT-AAAAATATTTCCACTATAATTATAAGGGAACAAAGCTCTGCAAG-TAGTAGTTAAAAGAATGTGTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 261910 140 - 192460366 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTATTTATAATTTGATGGGTGGATCTGGATATTTTGATACTAAGT-AAAAATATTTCCACTATAATTATAAGGGAACAAAGCTCTGCAAG-TAGTAGTTAAAAGAATGTGTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 280354 139 - 11645122 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTATTTATAATTTGATGGGTGGATCTGGATATTTTGATACTAAGT-AAAAATATTTCCACTATAATTATAAGGGAACAAAGCTCTGCAAG-TAGTAGTTAAAAGAATGTG-T i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 261728 139 - 6739814 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTATTTACAATTTGATGGGTGGATCTGGATATTTTGATACTAAGT-AAAAATATTTCCACTATAATTATAAGGGAACAAAGCTCTGCAAG-TAGTAGTTAAAAGAATGTG-T i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 152115 139 - 101219884 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTACTTACAATTTGATGGGTGGATCTGGATATTTTGATACTAAGT-AAAAATATTTCCACTATAATTATAAGGGAACAAAGGTCTGCAAG-TAGTAGTTAAAAGAATGTG-T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 272333 139 - 785044 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTATTTACAATTTGATGGGTGGATCTGTATATTTTGATACTAAGT-AAAAATATTTCCACTATAATTATAAGGGAACAAAGCTCTGCAAG-TAGTAGTTAAAAGAATGTG-T i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 171714 139 - 10971483 ATAAATTTGCAAAAGTAATTTACTGAAGGA--TTATTTACAATTTGATGGGTGGATCTGGATACTTTGATACTAAGT-AAAAATAGTTCCACTATAATTATAAGGGAACAAAGCTCTGCAAG-TAGTAGTTAAAAGAATGTG-T i colAng1.NW_012123820v1 C 0 C 0 s saiBol1.JH378168 11008441 138 - 13128814 ATAAACTTGAAAAAGTAATTTACTGAAGGA--TTATTTACACATTGACGAGTCGATCCGGATATTTTGATACCAAGT-GAAAATAGTTCCACTATAATTAACAAGCAACAAAGATCTACAA--TAGTGGTTAAGAGAACATG-T i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7749712 138 + 14377064 ATAAACTTGCAAAAGTAATTTACTGAAGGA--TTATTTACAAATTGATGAGTTGATCTGGATATTTTGATATCAAGT-GAAAACAGTTTCATTATAATTAGCAGGCAACAAAGATCTACAA--TAGTGGTTAAAAGAACATG-T i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4211018 138 - 9889416 ATAAACTTGCAAAAGTAATTTACTGAAGGA--TTATTTACACATTGATGAGTCGATCTGGATATTTTGATATCAAGT-GGAAATAGTTCCACTATAATTAGCAGGCAACAAAAATCTACAA--TAGTGGTTAAAAGAACATG-T i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20835323 139 + 38779656 ATA-ATTTGCAAAAGTAATTCATCCAAGGG--TGATTTACACTTTGA-GAGTTAATTTTGATGTTTTGGTACCAGGTAAAAAATAGTTACATAGTGATTAGAAGGCAAGAAAGATCTAAAAATTAGTGATTTAGAAAGTATA-T i otoGar3.GL873528 C 0 I 268 s canFam3.chr31 28870715 68 - 39895921 -------GGCACCATTTAtttatttaaagattttatttatttattcatgag---------------agacacacaga-gagag------------------------gcagaaac----------------------------- i canFam3.chr31 C 0 C 0 e calJac3.chr21 32795426 596 - 50472720 I a score=187992.000000 s hg38.chr22_KI270732v1_random 33217 22 + 41543 ataggccgggcacggtggctca s panPan2.chr3 77924619 22 + 205426864 ATAggccgggcacggtggctcg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149205 22 + 150013 attggccgggcacggtggctca i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255875 22 + 20583478 ATAGGCCGGGCACAGTGGCTCA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2772 22 - 27701 gtaagccgggcacggtggctca i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360242 22 - 204787373 ATAggccgagcacggtggctca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 262050 22 - 192460366 ATAggccgagcacggtggctca i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 280493 22 - 11645122 ATAggccgagcacggtggctca i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 261867 22 - 6739814 ATAggctgagcacggtggctca i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 152254 22 - 101219884 ATAggccaagcacggtggctca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 272472 22 - 785044 ATAggccgagcacggtggctca i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 171853 22 - 10971483 ATAggccaagcacagtggctca i colAng1.NW_012123820v1 C 0 C 0 s saiBol1.JH378168 11008579 22 - 13128814 ATAgggtgggcgcagtggctca i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7749850 22 + 14377064 ATAgggcgggcgcagtggctca i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4211156 22 - 9889416 ATAgggcaggcacagtggctca i aotNan1.NW_018487195v1 C 0 I 496 s canFam3.chr31 28870783 19 - 39895921 ataggcagag---ggtgaagca i canFam3.chr31 C 0 C 0 e calJac3.chr21 32795426 596 - 50472720 I e otoGar3.GL873528 20835462 268 + 38779656 I a score=34745.000000 s hg38.chr22_KI270732v1_random 33239 5 + 41543 tgcct- s panPan2.chr3 77924641 5 + 205426864 tgcct- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149227 5 + 150013 tgcct- i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255897 5 + 20583478 TGcct- i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2794 5 - 27701 tgcct- i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360264 5 - 204787373 tgcct- i rheMac8.chr2 C 0 I 517 s macFas5.chr2 262072 5 - 192460366 tgcct- i macFas5.chr2 C 0 I 519 s macNem1.NW_012010856v1 280515 5 - 11645122 tgcct- i macNem1.NW_012010856v1 C 0 I 519 s cerAty1.NW_012001605v1 261889 5 - 6739814 tgcct- i cerAty1.NW_012001605v1 C 0 I 528 s chlSab2.chr22 152276 5 - 101219884 tgcct- i chlSab2.chr22 C 0 I 722 s manLeu1.NW_012099043v1 272494 5 - 785044 tgcct- i manLeu1.NW_012099043v1 C 0 I 519 s colAng1.NW_012123820v1 171875 5 - 10971483 tgcct- i colAng1.NW_012123820v1 C 0 I 543 s saiBol1.JH378168 11008601 5 - 13128814 cacct- i saiBol1.JH378168 C 0 I 479 s cebCap1.NW_016107322v1 7749872 5 + 14377064 tacct- i cebCap1.NW_016107322v1 C 0 I 491 s canFam3.chr31 28870802 5 - 39895921 -ggctc i canFam3.chr31 C 0 C 0 e calJac3.chr21 32795426 596 - 50472720 I e aotNan1.NW_018487195v1 4211178 496 - 9889416 I e otoGar3.GL873528 20835462 268 + 38779656 I a score=9220.000000 s hg38.chr22_KI270732v1_random 33244 10 + 41543 cacctcaggt s panPan2.chr3 77924646 10 + 205426864 gacctcaggt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149232 10 + 150013 cacctcaggt i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255902 10 + 20583478 gacctcaggt i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2799 10 - 27701 gacctcaggt i nomLeu3.chrUn_GL398098_1 C 0 C 0 s canFam3.chr31 28870807 9 - 39895921 cacc-cgggt i canFam3.chr31 C 0 I 467 e calJac3.chr21 32795426 596 - 50472720 I e aotNan1.NW_018487195v1 4211178 496 - 9889416 I e cebCap1.NW_016107322v1 7749877 491 + 14377064 I e saiBol1.JH378168 11008606 479 - 13128814 I e otoGar3.GL873528 20835462 268 + 38779656 I e colAng1.NW_012123820v1 171880 543 - 10971483 I e manLeu1.NW_012099043v1 272499 519 - 785044 I e chlSab2.chr22 152281 722 - 101219884 I e cerAty1.NW_012001605v1 261894 528 - 6739814 I e macNem1.NW_012010856v1 280520 519 - 11645122 I e rheMac8.chr2 204360269 517 - 204787373 I e macFas5.chr2 262077 519 - 192460366 I a score=31355.000000 s hg38.chr22_KI270732v1_random 33254 44 + 41543 gatccacccgcctcggcttcccaaagtgctgggattacagtcat s panPan2.chr3 77924656 44 + 205426864 gatcctcctgcctcagactcccaaagtgctgggattacatgcat i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149242 44 + 150013 gatccacccgcctcggcttcccaaagtgctgagattacaCTCAT i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255912 44 + 20583478 gatccacccaccttggcctcccaaagtgctgggattacaCTCAT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2809 44 - 27701 gagccgcccacctcagcctcccaaagtgctgggatgacacgctt i nomLeu3.chrUn_GL398098_1 C 0 C 0 e calJac3.chr21 32795426 596 - 50472720 I e aotNan1.NW_018487195v1 4211178 496 - 9889416 I e cebCap1.NW_016107322v1 7749877 491 + 14377064 I e saiBol1.JH378168 11008606 479 - 13128814 I e otoGar3.GL873528 20835462 268 + 38779656 I e colAng1.NW_012123820v1 171880 543 - 10971483 I e manLeu1.NW_012099043v1 272499 519 - 785044 I e chlSab2.chr22 152281 722 - 101219884 I e cerAty1.NW_012001605v1 261894 528 - 6739814 I e macNem1.NW_012010856v1 280520 519 - 11645122 I e rheMac8.chr2 204360269 517 - 204787373 I e macFas5.chr2 262077 519 - 192460366 I e canFam3.chr31 28870816 467 - 39895921 I a score=4500.000000 s hg38.chr22_KI270732v1_random 33298 1 + 41543 g s panPan2.chr3 77924700 1 + 205426864 g i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149286 1 + 150013 G i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255956 1 + 20583478 G i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2853 1 - 27701 g i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360786 1 - 204787373 G i rheMac8.chr2 I 517 C 0 s macFas5.chr2 262596 1 - 192460366 G i macFas5.chr2 I 519 C 0 s macNem1.NW_012010856v1 281039 1 - 11645122 G i macNem1.NW_012010856v1 I 519 C 0 s chlSab2.chr22 153003 1 - 101219884 G i chlSab2.chr22 I 722 C 0 s manLeu1.NW_012099043v1 273018 1 - 785044 G i manLeu1.NW_012099043v1 I 519 C 0 e calJac3.chr21 32795426 596 - 50472720 I e aotNan1.NW_018487195v1 4211178 496 - 9889416 I e cebCap1.NW_016107322v1 7749877 491 + 14377064 I e saiBol1.JH378168 11008606 479 - 13128814 I e otoGar3.GL873528 20835462 268 + 38779656 I e colAng1.NW_012123820v1 171880 543 - 10971483 I e cerAty1.NW_012001605v1 261894 528 - 6739814 I e canFam3.chr31 28870816 467 - 39895921 I a score=47943.000000 s hg38.chr22_KI270732v1_random 33299 8 + 41543 TTAAGTGT s panPan2.chr3 77924701 8 + 205426864 TTAAGTGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149287 8 + 150013 TTAAGTGT i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255957 8 + 20583478 TTAAGTGG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2854 8 - 27701 TTAAGTGG i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360787 8 - 204787373 TTAAGTGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 262597 8 - 192460366 TTAAGTGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281040 8 - 11645122 TTAAGTGG i macNem1.NW_012010856v1 C 0 C 0 s chlSab2.chr22 153004 8 - 101219884 TTAAGTGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273019 8 - 785044 TTAAGTGG i manLeu1.NW_012099043v1 C 0 C 0 s calJac3.chr21 32796022 8 - 50472720 TTAAGTGG i calJac3.chr21 I 596 C 0 s saiBol1.JH378168 11009085 8 - 13128814 TTGAGTGG i saiBol1.JH378168 I 479 C 0 s otoGar3.GL873528 20835730 8 + 38779656 TTAAGCAT i otoGar3.GL873528 I 268 C 0 e aotNan1.NW_018487195v1 4211178 496 - 9889416 I e cebCap1.NW_016107322v1 7749877 491 + 14377064 I e colAng1.NW_012123820v1 171880 543 - 10971483 I e cerAty1.NW_012001605v1 261894 528 - 6739814 I e canFam3.chr31 28870816 467 - 39895921 I a score=8248.000000 s hg38.chr22_KI270732v1_random 33307 3 + 41543 TAC-- s panPan2.chr3 77924709 3 + 205426864 TAC-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149295 3 + 150013 TAC-- i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255965 3 + 20583478 TCC-- i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2862 3 - 27701 TAC-- i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360795 3 - 204787373 TAC-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 262605 3 - 192460366 TAC-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281048 3 - 11645122 TAC-- i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 262422 3 - 6739814 TAC-- i cerAty1.NW_012001605v1 I 528 C 0 s chlSab2.chr22 153012 3 - 101219884 TAC-- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273027 3 - 785044 TAC-- i manLeu1.NW_012099043v1 C 0 C 0 s calJac3.chr21 32796030 3 - 50472720 CAT-- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009093 3 - 13128814 CAT-- i saiBol1.JH378168 C 0 C 0 s otoGar3.GL873528 20835738 3 + 38779656 --CGT i otoGar3.GL873528 C 0 C 0 e aotNan1.NW_018487195v1 4211178 496 - 9889416 I e cebCap1.NW_016107322v1 7749877 491 + 14377064 I e colAng1.NW_012123820v1 171880 543 - 10971483 I e canFam3.chr31 28870816 467 - 39895921 I a score=238241.000000 s hg38.chr22_KI270732v1_random 33310 27 + 41543 TCTAATTATATCAGTAATTTAAACCTC s panPan2.chr3 77924712 27 + 205426864 TCTAATTATATCAGTAATTTAAACCTC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149298 27 + 150013 TCTAATTATATCAGTAATTTAAACCTC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255968 27 + 20583478 TCTAATTATATCAGTAATTTAAACCTC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2865 22 - 27701 TCTA-----ATCAGTAACCTAAATCTC i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360798 27 - 204787373 TCTAATTATATCAGTCATTTAAACCTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 262608 27 - 192460366 TCTAATTATATCAGTCATTTAAACCTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281051 27 - 11645122 TCTAATTATATCAGTCATTTAAACCTC i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 262425 27 - 6739814 TCTAATTATATCAGTCATTTAAACCTC i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 153015 27 - 101219884 TCTAATTATATCAGTCATTTAAACCTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273030 27 - 785044 TCTAATTATATCAGTCATTTAAACCTC i manLeu1.NW_012099043v1 C 0 C 0 s calJac3.chr21 32796033 27 - 50472720 TCTAATTTAATCAGTAATTTAAATCTC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009096 27 - 13128814 TCTAATTATATCAGTAATTTAAATCTC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7750368 27 + 14377064 TCTAATTATATCAGTAATTTAAATCTC i cebCap1.NW_016107322v1 I 491 C 0 s aotNan1.NW_018487195v1 4211674 27 - 9889416 TCTAATTATATCAGTAATTTAAATCTC i aotNan1.NW_018487195v1 I 496 C 0 s otoGar3.GL873528 20835741 27 + 38779656 TCTAGCAATATTACTAATTTTAACTTT i otoGar3.GL873528 C 0 C 0 e colAng1.NW_012123820v1 171880 543 - 10971483 I e canFam3.chr31 28870816 467 - 39895921 I a score=645778.000000 s hg38.chr22_KI270732v1_random 33337 71 + 41543 AAAAGAGATTC-ATTATGTATACAAAATTAATCTTGTGTAATTAAATTTAAAAGTAGAATTAATGGAAGAAA s panPan2.chr3 77924739 71 + 205426864 AAAAGAGATTC-ATCATGTACACAAAATTAATCTTGTGtaattaaatttataagtaaaattaattgaagaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149325 71 + 150013 AAAAGAGATTC-ATTATGTACACAAAATTAATCTTGTGTAATTAAATTTAAAAGTAAAATTAATGGAAGAAA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20255995 71 + 20583478 AAAAGAGATTC-ATTATGTACACAAAATTAATCTTGTGTAATGAAATTTATAAGTAAAATTAATTGAAGAAA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 2887 71 - 27701 AAAAGAGATTC-ATTATGTACACAAAATTAATCTTGTGTAATCAAGTGTATAAGTAAAATTAATTGAAGAAA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360825 68 - 204787373 AAAAGAGATTC-ATTATGTACACAAAATTAA---TGTGTAATTAAATTTATGAGTAAAATTAATTGAAGAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 262635 68 - 192460366 AAAAGAGATTC-ATTATGTACACAAAATTAA---TGTGTAATTAAATTTATGAGTAAAATTAATTGAAGAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281078 68 - 11645122 AAAAGAGATTC-ATTATGTACACAAAATTAA---TGTGTAATTAAATTTATGAGTAAAATTAATTGAAGAAA i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 262452 68 - 6739814 AAAAGAGATTC-ATTATGTACACAAAATTAA---TGTGTAATTAAATTTATGAGTAAAATTAATTGAAGAAA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 153042 68 - 101219884 AAAAGAGATTC-ATTATGTACACAAAATTAA---TGTGTAATTAAATTTATGAGTAAAATTAATTGAAGAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273057 68 - 785044 AAAAGAGATTC-ATTATGTACACAAAATTAA---TGTGTAATTAAATTTATGAGTAAAATTAATTGAAGAAA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 172423 68 - 10971483 AAAAGAGATTC-ATTATGTACACAAAATTAA---TGTGTGATTAAATTTATGAGTAACATTAGTTGAAGAAA i colAng1.NW_012123820v1 I 543 C 0 s calJac3.chr21 32796060 71 - 50472720 AAAAGAGATTC-ATTGTTCATGCAAATATAATCTTGTATAATTAAATTTAGGAGTAAAATTAATTGAATAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009123 70 - 13128814 -AAAGAGATTC-ATTGTATATACAAAAATAATCTTGTATAATTAAATTTAGGAGTAAAATTAATTGGAGAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7750395 70 + 14377064 AAAAGAGATTC-ATTGTATATACAAAAATAAAC-TGTATAATTAAATTTAGGAGTAAAATTAATTGAAGAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4211701 72 - 9889416 AAAAGAGATTCAATTTTATATACTAAAATAATCTTGTATAATTAAATTTAGGAGTAAaattaattgaagaat i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20835768 64 + 38779656 AAAAGAGATTC-ATCATCTAAGCAAAACTAATCTTGCATACTTCAAT-------TACAAGTAATTCTAAAAA i otoGar3.GL873528 C 0 C 0 e canFam3.chr31 28870816 467 - 39895921 I a score=2528377.000000 s hg38.chr22_KI270732v1_random 33408 275 + 41543 TC-AAAAAACACAAggtggctcacacctgtaatctcattgcttttggaagtctaggtgtgaggatcccttgacctaaggagtttgagaccagtcaagcaacacagtgggaccccatctctat-----aaaaaaattagctgggtatggtggtccgtgcctgtagtcctagccacttgagaggc----------cgaggcaaaagtatcgcttgagcctaggagttggagtctgctgtgagc--tatgatcacaccactgcactc-ctgccagagcaaaagagggagacTTTAAA s panPan2.chr3 77924810 275 + 205426864 tc-aaaaaacacaaggtggctcacacctgtaatctcattgctttcagaagtctaggtgggaggatcccttgacctaaggagtttgagaccagtcaagcaacatagtgggaccccatctctat-----aaaaaaattagccggggatggtggtgtgtgcctgtagcctgagctactcgagaggc----------cgaggcaaaagtatcacttgagcctaggagttggagtctgcagtgagc--tatgatcacaccactgcactc-cagccagagcaacagagagagactttaaa i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149396 275 + 150013 TC-AAAAAACACAAggtggctcacacctgtaatctcattgcttttggaagtctaggtgtgaggatcccttgacctaaggagtttgagaccagtcaagcaacacagtgggaccccatctctat-----aaaaaaattatccgggtatggtggtgcgtgcctgtagtcctagctacttgagaggc----------tgaggcaaaagtatcgcttgagcctaggagttggagtctgctgtgagc--tatgatcacaccactgcactc-ctgccagagcaacagagggagacTTTAAA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20256066 274 + 20583478 T--AAAAAACACAAggtggctcacacctgtaatctcattgctttcggaagtctaggtgggaggatcccttgacctaaggagtttgagaccagtcaagcaacatagtgggaccccatctctat-----aaaaaaattagctggggatggtggtgcgtgcctgtagtctgagctacttaagaggc----------caaggcaaaagtatcgcttgagcctaggagttggagtctgcagtaagc--tacgatcacaccaccgccctc-cagccagagcaacagagggagacTTTAAA i ponAbe2.chr3_random C 0 I 1029 s nomLeu3.chrUn_GL398098_1 2958 272 - 27701 TC-AAAAAACgcatggtggctgacacctgtaatctcagtgctttcggaagtctaggtggtaggatcccttgacctaaggaggctgagaccagtcaagcaacacggtggga-cccatctctgt-----aaaaaaattagccggggatggtggtgcgtgcctgtagtccgagctacctgagaggc----------cgaggc-aaagtatcgcttgagcctaggagttggagtctgcagtgagc--tatgatcacaccactg-actc-cagccagagcaacagagggagacaatgag i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204360893 273 - 204787373 TC--AGAAACACAAggtggctcacacctataatctcattgttttcggaagtctaggtgggaggatcccttgaccttaggagtttgagaccagccaggcaacacagtgggatcccatctctat------aaaaaattagcccggtgtggtggtgtgtgcctgtagtccaagctacttgagaggc----------cgaggcaaaagtatcgcttgggcctaagagttggagtctgcagtgagc--tgtgatcacgccactgcactc-cagccagagcgacagagggagacTTTAAA i rheMac8.chr2 C 0 I 7 s macFas5.chr2 262703 273 - 192460366 TC--AGAAACACAAggtggctcacacctataatctcattgttttcggaagtctaggtgggaggatcccttgaccttaggagtttgagaccagccaggcaacacagtgggatcccatctctat------aaaaaattagcccggtgtggtggtgtgtgcctgtagtccaagctacttgagaggc----------cgaggcaaaagtatcgcttgggcctaagagttggagtctgcagtgagc--tgtgatcacgccactgcactc-cagccagagcgacagagggagacTTTAAA i macFas5.chr2 C 0 I 7 s macNem1.NW_012010856v1 281146 273 - 11645122 TC--AGAAACACAAggtggctcacacctataatctcattgttttcggaagtctaggtgggaggatcccttgaccttaggagtttgagaccagccaggcaacacagtgggatcccatctctat------aaaaaattagcccggtgtggtggtgtgtgcctgtagtccaagctacttgagaggc----------cgaggcaaaagtatcgcttgggcctaagagttggagtctgcagtgagc--tgtgatcacgccactgcactc-cagccagagcgacagagggagacTTTAAA i macNem1.NW_012010856v1 C 0 I 7 s cerAty1.NW_012001605v1 262520 273 - 6739814 TC--AGAAACACAAggtggctcacacctataatctcattgctttcggaagtctaggtgggaggatcccttgaccttaggagtttgagaccagccaggcaacacagtgggatcccatctctat------aaaaaattagcccggtgtggtggtgtgtgcctgtagtccaagctacttgagaggc----------cgaggcaaaagtatcgcttgggcctaagagttggagtctgcagtgagc--tgtgatcacgccactgcactc-cagccagagcgacagagagagacTTTAAA i cerAty1.NW_012001605v1 C 0 I 7 s chlSab2.chr22 153110 284 - 101219884 TC--AGAAACACAAggtggctcacacctataatctcattgctttcggaagtctaggtgggaggatcccttgaccttaggagtttgagaccagccaggcaacacagtgggatcccatctctat-----aaaaaaattagccaggtgtggtggtgtgtgcctgtagtcctagctacttgagaggtatcgcttgggccaagcaaaagtatcgcttgggcctaagagttggagtctgcagtgagc--tgtgatcacgccactgccctc-cagccagagcgacagaggaagacTTTAAA i chlSab2.chr22 C 0 I 7 s manLeu1.NW_012099043v1 273125 273 - 785044 TC--AGAAACACAAggtggctcacacctataatctcattgctttcggaagtctaggtgggaggatcccttgaccttaggagtttgagaccagccaggcaacacagtgggatcccatctctat------aaaaaattagcccggtgtggtggtatgtgcctgtagtccaagctacttgagaggc----------cgaggcaaaagtatcgcttgggcctaagagttggagtctgcagtgagc--tgtgatcacgccactgcactc-cagccagagcgacagagggagacTTTAAA i manLeu1.NW_012099043v1 C 0 I 7 s colAng1.NW_012123820v1 172491 274 - 10971483 TC--GGAAACACAAggtggctcacacctctaatctcattgctttcggaagtctaggtgggaggaccccctgaccttaggagtttgagaccagccaagcaacatagtgggatcccatctctgt-----aaaaaaattagccaggtgtggtggtgtgtgcctgtagtcctagctacttgagaggc----------cgaggcaaaagtatcgcttgagcctaagagttggagtctgcagtgagc--tacgatcacaccactgcactc-cagccagagcgacagagggagacTTTAAA i colAng1.NW_012123820v1 C 0 I 11 s calJac3.chr21 32796131 275 - 50472720 TC-AAAAAACACAACgtggctcacacttgtaattttattgttttgagaagtctagatgggagggtttcttgacctcaggaatttgagaccagccaaacaacatagtgggaccccatttctat-----gaaaaaattagccgggcatggtggtgcatgcctgtagtcctagttactttagaggc----------tgaggcaaaagtgtcacttgagcctaggagttggagtatgcagtgaat--tatgatcacaccactgcactc-catccagagcaacagagggagaccttAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009193 282 - 13128814 TCAAAAAAACACAACgtggctcacactggtaattccattgctttgagaagtctagatgggaggatctcctgacctcaggagtttgagaccagccaagcaacacagtgggaccccatttctataagaaaaaaaaaatagctgggcatggtggtgcatgcctgtagtcctagctactttagagcc----------tgaggcaaaagtatcacttgaacctaggatttggagtatgcagtgaat--tatgttcacaccactgcattcacagccagagcaacagagggagaccttAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7750465 279 + 14377064 TC---AAAACACAACgtggctcacatttgtaatcccattgctttgagatgtctagatgggaggatctcttgacctcaggaatttgagaccagccaagcaacatagtgggaccccatttctat-taaaaaaaaaattagccgggcatggtggtgcatgcctatagtcctagctactttagaggc----------tgaggcaaaagtattgcttgaacctaggagttggaatatgcagtgaattatatgatcacaccactgcactc-cagccagagcaacagagggagaccttAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4211773 272 - 9889416 tc-aaaaaacgcaatgtggctcacacttgtaatcccattgctttgagaagtctagatgggaggatctcttgacctcaggagtttgagaccagccaagcaacatagtgggaccccatttttat-----aaaaaaattatccgggcatggtggtgcatgcctgtagtcctagctactttagaggc----------tgaggcaaaagtatcacttgagcctcggagttggagtatgcagtgaat--ta---tcacaccattgcactc-cagccagagcaacagaggaagaccttaaa i aotNan1.NW_018487195v1 C 0 C 0 e otoGar3.GL873528 20835832 0 + 38779656 C e canFam3.chr31 28870816 467 - 39895921 I a score=10920.000000 s hg38.chr22_KI270732v1_random 33683 1 + 41543 A s panPan2.chr3 77925085 1 + 205426864 a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149671 1 + 150013 A i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20257369 1 + 20583478 a i ponAbe2.chr3_random I 1029 C 0 s nomLeu3.chrUn_GL398098_1 3230 1 - 27701 a i nomLeu3.chrUn_GL398098_1 C 0 I 201 s rheMac8.chr2 204361173 1 - 204787373 A i rheMac8.chr2 I 7 C 0 s macFas5.chr2 262983 1 - 192460366 A i macFas5.chr2 I 7 C 0 s macNem1.NW_012010856v1 281426 1 - 11645122 A i macNem1.NW_012010856v1 I 7 C 0 s cerAty1.NW_012001605v1 262800 1 - 6739814 A i cerAty1.NW_012001605v1 I 7 C 0 s chlSab2.chr22 153401 1 - 101219884 A i chlSab2.chr22 I 7 C 0 s manLeu1.NW_012099043v1 273405 1 - 785044 A i manLeu1.NW_012099043v1 I 7 C 0 s colAng1.NW_012123820v1 172776 1 - 10971483 A i colAng1.NW_012123820v1 I 11 C 0 s calJac3.chr21 32796406 1 - 50472720 a i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009475 1 - 13128814 A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7750744 1 + 14377064 a i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4212045 1 - 9889416 a i aotNan1.NW_018487195v1 C 0 I 35 e otoGar3.GL873528 20835832 0 + 38779656 C e canFam3.chr31 28870816 467 - 39895921 I a score=17879.000000 s hg38.chr22_KI270732v1_random 33684 14 + 41543 ---------------AATAAATAAAT-ATA s panPan2.chr3 77925086 10 + 205426864 ---------------aataaataa-----a i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149672 10 + 150013 ---------------AATAAATAT-----A i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20257370 10 + 20583478 ---------------aataaataa-----a i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 3432 10 - 27701 ---------------tataaaTAA-----A i nomLeu3.chrUn_GL398098_1 I 201 C 0 s rheMac8.chr2 204361174 13 - 204787373 ---------------AATAAATAAAT-A-A i rheMac8.chr2 C 0 C 0 s macFas5.chr2 262984 13 - 192460366 ---------------AATAAATAAAT-A-A i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281427 13 - 11645122 ---------------AATAAATAAAT-A-A i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 262801 13 - 6739814 ---------------AATAAATAAAT-A-A i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 153402 13 - 101219884 ---------------AATAAATAAAT-A-A i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273406 13 - 785044 ---------------AATAAATAAAT-A-A i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 172777 13 - 10971483 ---------------AATAAATAAAT-A-A i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32796407 29 - 50472720 atcaatcaatcgatcaatcaatcaatca-a i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009476 21 - 13128814 ATCA--------GTCAATCAATCATTCA-A i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7750745 21 + 14377064 atca--------atcaatcaatcagtca-a i cebCap1.NW_016107322v1 C 0 C 0 e aotNan1.NW_018487195v1 4212046 35 - 9889416 I e otoGar3.GL873528 20835832 0 + 38779656 C e canFam3.chr31 28870816 467 - 39895921 I a score=83862.000000 s hg38.chr22_KI270732v1_random 33698 9 + 41543 TCACAAAAT s panPan2.chr3 77925096 9 + 205426864 tCACAAAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149682 9 + 150013 TCACAAAAC i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20257380 9 + 20583478 tCACAAAAC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 3442 9 - 27701 TCACAACAC i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204361187 9 - 204787373 TCACAAAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 262997 9 - 192460366 TCACAAAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281440 9 - 11645122 TCACAAAAC i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 262814 9 - 6739814 TCACAAAAC i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 153415 9 - 101219884 TCACAAAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273419 9 - 785044 TCACAAAAC i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 172790 9 - 10971483 TCACAAAAC i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32796436 9 - 50472720 tcaCAAAAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009497 9 - 13128814 TTACACAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7750766 9 + 14377064 tTACACAAC i cebCap1.NW_016107322v1 C 0 C 0 s otoGar3.GL873528 20835832 9 + 38779656 TCTCAAAAC i otoGar3.GL873528 C 0 C 0 e aotNan1.NW_018487195v1 4212046 35 - 9889416 I e canFam3.chr31 28870816 467 - 39895921 I a score=903277.000000 s hg38.chr22_KI270732v1_random 33707 105 + 41543 ACTTCTGATTCCAAGTCCAGATATATAAAC--CACAGGAATACTTATATAAACACACGTTATACATACATATAGTATATGTATGATAAAATATACTTGTATGTTCAA s panPan2.chr3 77925105 90 + 205426864 ACTTGTAATTCCAAATCCAGatatata-----------catacttatataaacacatgttatcc------atagtatatgtatgataaaatataCTTGTATGTTCAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149691 105 + 150013 ACTTGTGATTCCAAGTCCAGATATATAAAC--CACAGGAACACTTATATAAACACACGTTATACATACATATAGTATATGTATGATAAAATATACTTGTATGTTCAA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20257389 105 + 20583478 ACTTGTAATTCCAAATCCAGTTATATAAAC--CACAGGAAAACTTATATAAACACACGTTATACATACATATAGTATATGTATGATAAAATATACTTGTATGTTCAA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 3451 105 - 27701 ACTTGTAATTCCAAATCCAGATATATAAAC--CACAGGAATACTTATATAAACACACGTTATACACACATATAGTATATGTATGATAAAATATACTTGTATGTTCAA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204361196 100 - 204787373 ACTCAAAATTCCAAATCCAGATACATAAAC--CACAGGAATACTTATGTAAACACATGTTATACATATATATAG-----GTATGATAAAATACACTTCAGTGTTCAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 263006 100 - 192460366 ACTCAAAATTCCAAATCCAGATACATAAAC--CACAGGAATACTTATGTAAACACATGTTATACATATATATAG-----GTATGATAAAATACACTTCTGTGTTCAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281449 100 - 11645122 ACTCAAAATTCCAAATCCAGATACATAAAC--CACAGGAATACTTATGTAAACACATGTTATACATATATATAG-----GTATGATAAAATACACTTCTGTGTTCAA i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 262823 99 - 6739814 ACTCAAAATTCTAAATCCAGATACATAAAC--CAC-GGAATACTTATGTAAACACATGTTATACATACATAGAG-----GTATGATAAAATACACTTCTGTGTTCAA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 153424 100 - 101219884 ACTCAAAATTCCAAATCCAGATACATAAAC--CACAGGAATACTTATGTAAACACATGTTATACATACATATAG-----GTATGATAAAATACACTTCTGTGTTCAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273428 100 - 785044 ACTCAAAATTCCAAATCCAGATACATAAAC--CACAGGAATACTTATGTAAACACATGTTATACATACATATAG-----GTATGATAAAATACACTTCTGTGTTCAA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 172799 100 - 10971483 ACTCAAAATTCCAAATCCAGATACATAAAC--CACAGGAATACTTATATAAACACACGTTATACATACATATAG-----ATATGATAAAATACACTTCTGTGTTCAA i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32796445 98 - 50472720 ACTTGTAATTCCAAATCCAGATATATAACC--CACAGGAATACTTATATAAATGCACGTTATGCATTCATAT-------GTATGATAAAATATACTTGCAGGTTCAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009506 98 - 13128814 ACTTGTAATTCCAAATCCAGATATATAATC--TACAGGAATACTTATATAAATGCATGTTATACATTCATAT-------GTATGATAAAATATACTTGTAGGTTGAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7750775 98 + 14377064 ACTTGTAATTCCGAATCCAGATATATAACT--TACAGGAATACTTATATAAATGCACGTTATACATTCATAT-------GTATGATAAAATATACTTGTAGGTTGAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4212081 98 - 9889416 ACTTGTAATTCCAAATCCAGatatataacc--tacagaaatatttatataaatgcacattatacattcatat-------gtatgataaaatataCTTGTAGGTTCAA i aotNan1.NW_018487195v1 I 35 C 0 s otoGar3.GL873528 20835841 104 + 38779656 ACTTATAATTCCAAATCAAGATATAAAACCCGCACAGGAACACTCATATATACATATGTT-TTCATATATACATTTT--ATATGATAAAATATACTTCAATGTTCAA i otoGar3.GL873528 C 0 C 0 e canFam3.chr31 28870816 467 - 39895921 I a score=295676.000000 s hg38.chr22_KI270732v1_random 33812 27 + 41543 CTTGGGAAAGGTTGATGA-TTTTAGAAA s panPan2.chr3 77925195 27 + 205426864 CTTGGGAAAGGTTGTTGA-TTTTAGAAA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01000341v1 149796 28 + 150013 CTTGGGAAAGGTTGATGATTTTTAGAAA i gorGor5.CYUI01000341v1 C 0 C 0 s ponAbe2.chr3_random 20257494 27 + 20583478 CTTGGGAAAAGTTGATGA-TTTTAGAAA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 3556 27 - 27701 CTTGGGAAAGGTTGATGA-TTTTAGAAA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204361296 27 - 204787373 CTTGGGAAAGGTTGATGA-TTTTAGAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 263106 27 - 192460366 CTTGGGAAAGGTTGATGA-TTTTAGAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281549 27 - 11645122 CTTGGGAAAGGTTGATGA-TTTTAGAAA i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 262922 27 - 6739814 CTTGGGAAAGGTTGATGA-TTTTAGAAA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 153524 27 - 101219884 CTTGGGAAAGGTTGATGA-TTTTAGAAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273528 27 - 785044 CTTGGGAAAGGTTGATGA-TTTTAGAAA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 172899 27 - 10971483 CTTGGGAAAGGTTGATGA-TTTTAGAAA i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32796543 27 - 50472720 CTTGAGAAAGGCTGATGA-TTTTAGAAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11009604 27 - 13128814 CTTGAGAAAGGCTGATGA-TTTTAGAAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7750873 27 + 14377064 CTTGAGAAAGGCTCATGA-TTTTAGAAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4212179 27 - 9889416 CTTGAGAAAGGCTGATGA-TTTTAGAAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20835945 24 + 38779656 GATGGAAAAGGT---CGA-TTTGGGGaa i otoGar3.GL873528 C 0 I 7 s canFam3.chr31 28871283 24 - 39895921 CTCTGGAAA---TGGTTC-TTTTAGAGA i canFam3.chr31 I 467 C 0 a score=9029.000000 s hg38.chr22_KI270732v1_random 33839 1 + 41543 C s panPan2.chr3 77925222 1 + 205426864 C i panPan2.chr3 C 0 I 5 s gorGor5.CYUI01000341v1 149824 1 + 150013 C i gorGor5.CYUI01000341v1 C 0 I 5 s ponAbe2.chr3_random 20257521 1 + 20583478 C i ponAbe2.chr3_random C 0 I 5 s nomLeu3.chrUn_GL398098_1 3583 1 - 27701 C i nomLeu3.chrUn_GL398098_1 C 0 I 5 s rheMac8.chr2 204361323 1 - 204787373 C i rheMac8.chr2 C 0 I 5 s macFas5.chr2 263133 1 - 192460366 C i macFas5.chr2 C 0 I 5 s macNem1.NW_012010856v1 281576 1 - 11645122 C i macNem1.NW_012010856v1 C 0 I 5 s cerAty1.NW_012001605v1 262949 1 - 6739814 C i cerAty1.NW_012001605v1 C 0 I 5 s chlSab2.chr22 153551 1 - 101219884 C i chlSab2.chr22 C 0 I 5 s manLeu1.NW_012099043v1 273555 1 - 785044 C i manLeu1.NW_012099043v1 C 0 I 5 s colAng1.NW_012123820v1 172926 1 - 10971483 C i colAng1.NW_012123820v1 C 0 I 5 s calJac3.chr21 32796570 1 - 50472720 C i calJac3.chr21 C 0 I 5 s saiBol1.JH378168 11009631 1 - 13128814 C i saiBol1.JH378168 C 0 I 5 s cebCap1.NW_016107322v1 7750900 1 + 14377064 A i cebCap1.NW_016107322v1 C 0 I 5 s aotNan1.NW_018487195v1 4212206 1 - 9889416 C i aotNan1.NW_018487195v1 C 0 I 5 s tarSyr2.KE939969v1 98072 1 - 345090 C i tarSyr2.KE939969v1 N 0 N 0 s otoGar3.GL873528 20835976 1 + 38779656 t i otoGar3.GL873528 I 7 C 0 s canFam3.chr31 28871307 1 - 39895921 T i canFam3.chr31 C 0 I 7 a score=1802486.000000 s hg38.chr22_KI270732v1_random 33840 178 + 41543 AGTAATTCTATTGCCTTATGCTCGAATGATTTTCAATTTGAAGATG--TATTTGGGATCAAATACTTG-AGGCTCCGTACACA-AGACATCTTTTTTTCCC-----CTCAGAAT--CATTTTT----TGGCTGATTATTGGATTACAATTGGGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTgttc--a s panPan2.chr3 77925228 182 + 205426864 AATAATTCTGTTGCCTTATGCTCTAATGATTTTCAATTTGAAGATG--TATTTGGGATCAAATACTTG-AGCCTCCATACACA-AGACATCTTTTTTTCCC-TCTTCTCAGCAT--CAGTTTT----TGGCTGATTGTTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTGTTC--a i panPan2.chr3 I 5 C 0 s gorGor5.CYUI01000341v1 149830 183 + 150013 AATAATTCTATTGCCTTATGCTCGAATGATTTTCAATTTGAAGATG--TATTTGGGATCAAATACTTG-AGGCTCCATACACA-AGACATCTTTTTTTCCCCTCTTCTCAGAAT--CATTTTT----TGGCTGATTATTGGACTACAATTGAGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTGTTC--A i gorGor5.CYUI01000341v1 I 5 N 0 s ponAbe2.chr3_random 20257527 182 + 20583478 GATAATTCTATTGTCTTATGCTTTAATGATTTTCAATTTGAAGATG--TATTTGGGATCAAATACATG-AGGCTCCATACACA-AGACATCTTTTTTTCCC-TCTTCTCAGCAT--CAGTTTT----TGGCTGATTATTGGACTACAATTGGGGGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTgttc--a i ponAbe2.chr3_random I 5 C 0 s nomLeu3.chrUn_GL398098_1 3589 181 - 27701 AATAATTCTATTGCCTTGTGCTCTAATGATTTGCAATTTGAAGATG--TATTTGGGATCAAATACATG-AGGCTCCATATACA-AGACATCTTTCTTTCCCCTCTTCTCAGCAT--CATGTTT----TGGCTGATTATTGGACTACAACTGGGAGATCTAGAAGTAGAT--CTGC------------------------------------------------------------------------------------------TTAGTGTTtacttgttc--a i nomLeu3.chrUn_GL398098_1 I 5 C 0 s rheMac8.chr2 204361329 184 - 204787373 AGTAATTCTATTGCCTTATGCTCTAATGA-TTTCAATTTGAAGATGTTTATTTGGGATCAAATACATG-AGGCTCCGTACACA-AGACGTCTTTTTTTTCCCTCTTCTCAGCAT--CATTTTT----TGGCTGATTATTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTgttc--a i rheMac8.chr2 I 5 C 0 s macFas5.chr2 263139 184 - 192460366 AGTAATTCTATTGCCTTATGCTCTAATGA-TTTCAATTTGAAGATGTTTATTTGGGATCAAATACATG-AGGCTCCGTACACA-AGACGTCTTTTTTTTCCCTCTTCTCAGCAT--CATTTTT----TGGCTGATTATTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTgttc--a i macFas5.chr2 I 5 C 0 s macNem1.NW_012010856v1 281582 184 - 11645122 AGTAATTCTATTGCCTTATGCTCTAATGA-TTTCAATTTGAAGATGTTTATTTGGGATCAAATACATG-AGGCTCCGTACACA-AGACATCTTTTTTTTCCCTCTTCTCAGCAT--CATTTTT----TGGCTGATTATTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTGTTC--a i macNem1.NW_012010856v1 I 5 C 0 s cerAty1.NW_012001605v1 262955 185 - 6739814 AGTAATTCTGTTGCCTTATGCTGTAATGATTTTCAATTTGAAGATGTTTATTTGGGATCAAATACATG-AGGCTCCATACACA-AGACATCTTTTTTTTCCCTCTTCTCAGCAT--CATTTTT----TGGCTGATTATTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTgtatacttgttc--a i cerAty1.NW_012001605v1 I 5 C 0 s chlSab2.chr22 153557 274 - 101219884 AATAATTCTATTGCCTTATGCTCTAATGATTTTCAATTTGAAGATGTTTATTTGGGATCAAATACATG-AGGTTCCATACACA-AGACATC-TTTTTTTCCCTCTTCTCAGCAT--CATTTTT----TGGCTGATTATTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGCTTAGTGTTTACTTGTTCAGAGCATAGGCTTNNNNNNNNNNTTTGGCTGATTATTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGCTTAGTGTTTACTTGTTC--A i chlSab2.chr22 I 5 C 0 s manLeu1.NW_012099043v1 273561 185 - 785044 AGTAATTCTGTTGCCTTATGCTGTAATGATTTTCAATTTGAAGATGTTTATTTGGGATCAAATACATG-AGGCTCCATACACA-AGACATCTTTTTTTTCCCTCTTCTCAGCAT--CATTTTT----TGGCTGATTATTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTgttc--a i manLeu1.NW_012099043v1 I 5 C 0 s colAng1.NW_012123820v1 172932 184 - 10971483 AATAATTCTATTGCCTTATGCTCTAATGATTTTCAATTTGAAGATGTTTATTTGGGATCAAATACATG-AGGCTCCACACACA-AGACATC-TTTTTTTCCCTCTTCTCAGCAT--CGTTTTT----TGGCTGATTATTGGACTACAATTGGGAGATCTAGAACTAAATTCCTGC------------------------------------------------------------------------------------------TTAGTGTTTACTTgttc--a i colAng1.NW_012123820v1 I 5 C 0 s calJac3.chr21 32796576 185 - 50472720 AATGATTCAATTGCCTTATGCTCTAATGATTTTCAATTTGAAGATGTTCATTTGGGATCAAATACATG-AGGTTTCATATACA-AGATATA---TTTTTCCCTCTTCTCAGCATC-ATTTTTT----TGGTTGATTATTGGACTACGGTTGGAAGATCTAGAACTAAATATCTGC------------------------------------------------------------------------------------------TTGGTGATTACCTGGTCAGA i calJac3.chr21 I 5 C 0 s saiBol1.JH378168 11009637 185 - 13128814 AATAATTCAATTGCCTTATACTCTAATGATTTTCAGTTTGAAGATGTTTATTTGGGATCAAATACATG-AGGTTTCATACACA-AGACATA--TTTTTTCCCTCTTCTTAGCATCAATTTTTT----TGGCTGATTATTGGAATACAGTTGGAAGATCTAGAACTACATATCTGC------------------------------------------------------------------------------------------TTACTGATTACCtggtc--a i saiBol1.JH378168 I 5 C 0 s cebCap1.NW_016107322v1 7750906 183 + 14377064 AATAATTCAGTTGCCTTATACTCTAATGATTTTCAATTTGAAGATGTTTATTTGGGATCAAATACATG-AGGTTTCATACACA-AGACATA--TTTTTTCCCTCTTCTCAGCAT--AATTTTT----TGGCTGATTATTGCACTACAGTTGGAAGATCTAGAACTAAAGATCTGC------------------------------------------------------------------------------------------TTACTGATTACCTGGTC--a i cebCap1.NW_016107322v1 I 5 C 0 s aotNan1.NW_018487195v1 4212212 184 - 9889416 AAAAATTCAATTGCCTTATGCTCTAATGATTTTCAATTTCAAGATATTTATTTGGGATCAAATACATG-AGGTTTCATACATA-AGACGTA-TTTTTTTCCCTCTTCTCAGCATT-ATTTTTT----TGGCTGATTATTGGAC-ACAGTTGGAAGATCTAGAACTAAATATCTGC------------------------------------------------------------------------------------------TTACTGATtactaggtc--a i aotNan1.NW_018487195v1 I 5 C 0 s otoGar3.GL873528 20835977 169 + 38779656 aataattaaattGCCTTGTGCTCTATTGATTTTTAATTTGAAGGTG----TTTGTGATCAAATACATGAAGGTTCTACGTGCACAGAGATC--TGTTCTCC-----CTCAGCAT--CATTTTT----CGA-TGATTATTAGAGTATAGTTGG-AGATC-----CCAGATTCCTGC------------------------------------------------------------------------------------------TCAGGGGTTAATTTTTA--A i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28871315 175 - 39895921 GATCATTCAATTG----ATGTTTTAATGATTTTCAATCTGAAGATGTTTATTTGGAAT-GAATATGTG-AGGTTCAATATGCG-GGAGATC---TTTTTCC---TTCTCAGTAT--CCTTTTTGGAATGATTGATTACTGGACTGTAGCT---ATATCTAGGGTTACATTTCTGC------------------------------------------------------------------------------------------TTAGTAATCCATTGTTC--a i canFam3.chr31 I 7 C 0 a score=3341492.000000 s hg38.chr22_KI270732v1_random 34018 330 + 41543 gagcataggcattgaaatcgtcctgttttgcctc-agtctcc-acaatagtacctactaacctcatgactaggggatcgtgtagcatttctctaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttgaaagtgctttgttcataggatttctgtgaaaaccaaactgggtaaagaatgtaaggcatttagctcagtaaaataacctggattacagtaacttttcatggagtgtttattagtactTAAACTGTCAT----TGTCATCAAAATTCTGTTTTTACAtatgaacttagaaatgtcattgtaaccttctcaaatcatttggtcattt s panPan2.chr3 77925410 328 + 205426864 gagcataggctttgaaatcgtcctgttttgcctc-agtctcc-acaatagtaccca-taacctcatgactaggggatcacgtagcatttctctaagccttgtttttcttag------------------------------ccgtgaagtggtaaatgttgaaagtgctttgttcataagatttctgtgaaaactaaattgggtaaagaatgtaaggcatttagcac-gtaaaataacctggattacagtaaCTTTTCATGGAGTATTTATTGGTACTTAAACTGTCAC----TGTCATCAAAATTCTGTTTTTACAtatgaacttagaaatgtcattgtaacctccttaactcatttggtcattt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 85293 329 + 12760026 gagcataggcattgaaatcgtcctgttttgcctc-agtctcc-acaatagtaccac-taacctcatgactaggggatcgtgtagcatttctctaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttgaaagtgctttgttcataggatttctgtgaaaactaaattgggtaaagaatgtaaggcatttagcacagtaaaataacctggattacagtaacttttcatggagtgtttattagtactTAAACTGTCAT----TGTCATCAAAATTCTGTTTTTACAtatgaacttagaaatgtcattgtaaccttctcaactcatttggtcattt i gorGor5.CYUI01015020v1 N 0 C 0 s ponAbe2.chr3_random 20257709 328 + 20583478 gagcataggctttgaaatcatcctgttttgcctc-agtctcc-acaatagtaccta-taacctcatgactaggggattgtgtagcatttctctaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttggaagtgctttgttcataggatttctgtgaaaactaaattgggtaaagaatgtaaggcatttagcaccgtaaaataacctggattacagtaacttttcatggagtgtttattagtactTAAACT-TCAT----TGTCATCAAAATTCTGTTTTTACAtatgaacttagaaatgtcattgtaaccttctcaactcatttggtcattt i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 3770 329 - 27701 gagcacaggctttgaaatcgtcctgttttgcctc-agtctcc-acaatggtacctactaacctcatgactaggggatcgtgtagcatttctctaagccttg-ttttcttag------------------------------ctgtgaagtggtaaattttggaagtgctttgttcataggatttctgtgaaaactgaattgggtaaagaatgtaaggcatttagcacagtaaaataacctggattacagtaacttttcaaggagtgtttattagtactTAAACTGTCAT----TGTCATCAAAATTCTGTTTTTACAtatgaacttagaaatgtcattgtaaccttctcaactcagttggtcattt i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204361513 330 - 204787373 gagcataggctttgaaatcatcctgttttgcctc-agtctcc-acaacagtacctactaacctcacaactaggggatcctgtagcatttctctaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttgaaagtgctttgttcataggatttctgtgaaaactatattgggtaaagaatgtaaggcatttagcatagtaaaataacttggattacagtaacttttcatggagtgtttattagtactTAACCTGTCAT----TGTCATCAAAATTCTGTTTTTACATATTAACTCAGAAATgtcattgtaaccttctcaactcatttggtcattt i rheMac8.chr2 C 0 C 0 s macFas5.chr2 263323 330 - 192460366 gagcataggctttgaaatcatcctgttttgcctc-agtctcc-acaacagtacctactaacctcacaactaggggatcctgtagcatttctctaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttgaaagtgctttgttcataggatttctgtgaaaactatattgggtaaagaatgtaaggcatttagcatagtaaaataacttggattacagtaacttttcatggagtgtttattagtactTAACCTGTCAT----TGTCATCAAAATTCTGTTTTTACATATTAACTCAGAAATgtcattgtaaccttctcaactcatttggtcattt i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 281766 330 - 11645122 gagcataggctttgaaatcgtcctgttttgcctc-agtctcc-acaacagtacctactaacctcacaactaggggatcctgtagcatttctctaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttgaaagtgctttgttcataggatttctgtgaaaactatattgggtaaagaatgtaaggcatttagcatagtAAAATAACTTGTATTACAGTAACTTTTCATGGAGTGTTTATTAGTACTTAACCTGTCAT----TGTCATCAAAATTCTGTTTTTACATATTAACTCAGAAATgtcattgtaaccttctcaactcatttggtcattt i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 263140 330 - 6739814 gagcataggctttgaaatcgtcctgttttgcctc-agtctcc-acaacagtacctactaacctcacaactaggggatcctgtagcatttctctaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttgaaagtgctttgttcataggatttctgtgaaaactatattgggtaaagaatgtaaggcatttagcatagtaaaataacttgggttacagtaacttttcatggagtgtttattagtactTAACCTGTCAT----TGTCATCAAAATTCTGTTTTTACATATTAACTCAGAAATgtcattgtaaccttctcaactcatttggtcattt i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 153831 330 - 101219884 GAGCATAGGCTTTGAAATCGTCCTGTTTTGCCTC-AGTCTCC-ACAACAGTACCTAATACCCTCACAACTAGGGGATCCTGTAGCatttctctaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttgaaagtgctttgttcataggatttctgtgaaaactatattgggtaaagaatgtaaggcacttagcatagtAAAATAACTAGGATTACAGTAACTTTTCATGGAGTGTTTATTAGTACTTAACCTGTCAT----TGTCATCAAAATTCTGTTTTTACATACGAACTCAGAAGTGTCTTTGTAACCTTCTCAActcatttggtcattt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 273746 330 - 785044 gagcataggctttgaaatcgtcctgttttgcctc-agtctcc-acaacagtacttactaacctcacaactaggggatcctgtagcatttctttaagccttgtttttcttag------------------------------ctgtgaagtggtaaattttgaaagtgctttgttcataggatctctgtgaaaactctattgggtaaagaatgtaaggcatttagcatagtaaaataacttggattacagtaacttttcatggagtgtttattagtactTAACCTGTCAT----TGTCATCAAAATTCTGTTTTTACATATTAACTCAGAAATgtcattgtaaccttctcaactcatttggtcattt i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 173116 330 - 10971483 gagcataggctttgaaatcatcttgttttgcctc-agtctcc-acaacagtacctactaacctcacgactaggggatcgtgtagcatttctctaagccttgtttttcttag------------------------------ctgtgaagccgtaagttttgaaagtgctttgttcataggatttctgtgaaaactacattgggtaaagaatataaggcatttagcatagtaaaataacttggattacagtaacttttcacggagtgtttattagtactTAACCTGTCAT----TGTCATCAAAATTCTGTTTTTACAtatgaactcagaaatgtcattgtaaccttctcgactcatttgatcattt i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32796761 274 - 50472720 GAGCATAGGCTTTG--ATCGTCGTGTTTAAACTC-AGTCTCC-ACAACAGTAACTACCAACGTCATGACTAGCAGATTGTGT---------------------------------------------------------------------------------AGCGCTTTGTtcataggatttctgtgaaaactaaattaggtaaagaatgtaaggcgtttagcagagCAAAATAACTTGAACGACAGTAACTCTTCTTGGAATGTTTATTAGTACTTAAACTGTCAT----TGTCATAAGAATTCTGTTTTTATATGTGAACTTAGAAATGCCATTGTAA---TCTCAACTCATTTGATCATTT i calJac3.chr21 C 0 I 284 s saiBol1.JH378168 11009822 323 - 13128814 gaacataggctttg--atcatcgtgtttaagctc-agtctcc-acaacagtaactaccaatgtcatgactagggaattgtgtaacactgctctaagccttg-ttttcttag------------------------------ctgtgaagtggtaa-ttttgaaagcgctttgttcataggatttctgtgaaaactaaattgggtaaagaatgtaaggcatttagcacagtaaaataacttggactacagtaactcttcttggaatgtttattagtactTAAACTGTCAT----TGTCATCAGAATTCCGTTTTTATGTGTGAACTTAGAAATGCCATTGTAA---TCTCAACTCATTTGGTCACTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7751089 320 + 14377064 gagcataggctttg--atcatcgtgtttaagctc-agtctcc-acaacagtaactaccaacgtcatgactaggggattgtgtagctctgctctaagtcttg-ttttcttag------------------------------ctgtgaggtggtaa-ttttgaaagcgctttattcagaggatttctgtgaaaactaaattgggtaaagaatgtaaggcatttagcacagtaaaataacttggactatagtgacacttcttggaatgtttattagtactTAAGCTGTC-------GTCATCAGAATTCTGTTTTTAtatgtgaacttagaaatgccattgtaa---tctcaactcatttgatcattt i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4212396 323 - 9889416 gagcataggctttg--atcttcgtgttttagctc-ggtctcc-gcaacagtaactactaacctcatgactaggggattgtgtagcactgctataagccttg-ttttcttag------------------------------ctgtgaagtggtaa-ttttgaaagtgctttgttcataggatttctgtgaaaactaaattgggtaaagaatgtaagatatttagcacagtaaaataacttggactacagtaactcttcatggaatgtttattagtactTAGACTGTCAT----TGTCATCAGAATTCTATTTTTGTATGTGAACTTAGAAATGCCATTGTAA---TCTCAACTCATTTGGTCATTT i aotNan1.NW_018487195v1 C 0 I 290 s otoGar3.GL873528 20836146 335 + 38779656 GAGCACAGGCTTTG----------------GCTC-GGTTCCCAACAACAGTACCTACTAATAGCAAGACTAAGGAATTGTGT-GTTTTTCTCACAGCCCTGGTTTTTTCAAAATTGTGTGGcttctcatagccttggtttttcgtaaaatggtga-ttgtgaaagcgcttagttcgtaggctttctgtgagaactaaatgagagcgagaacgtgagacacttcg------gaaataacctgggc-acggtaagttttcaCGGACTATTTATTAGTACTAAGACTGGTAC----AGCCCTCAGCGTTCTGTCCTTCCACTTGgatttggggttatcactgcaatcttctc-ccccacttcgtcattt i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28871490 321 - 39895921 gagcataggctctgaagtcactcagttttggctcaagtcaca-acaatgttagctacaaatcatctgatttgggaattgtgtgtcttttctctgagcttctgttttctgtg------------------------------ctttgaagtagtga-tttttaaattgctttctttgtagagtttctatg--aactaaatgagaca---aatacaaggcatttagcacagtAAAATGAGGTAGAATTTAAAAAATTTTCAGGAAA----TATTAGTGTTAATACTATCATCTTCTGTCATCA---TTGTATTACTACACTTCAGTTTGGAGATGTCATTACAACCTCTTGGACT-GTTTACTCATTT i canFam3.chr31 C 0 C 0 a score=93774.000000 s hg38.chr22_KI270732v1_random 34348 8 + 41543 aaaatgga s panPan2.chr3 77925738 8 + 205426864 aaaatgga i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 85622 8 + 12760026 aaaatgga i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20258037 8 + 20583478 aaaatgga i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 4099 8 - 27701 aaaatgga i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204361843 8 - 204787373 aaaatggg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 263653 8 - 192460366 aaaatggg i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 282096 8 - 11645122 aaaatggg i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 263470 8 - 6739814 aaaatggg i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 154161 8 - 101219884 aaaatggg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 274076 8 - 785044 aaaatggg i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 173446 8 - 10971483 aaaatggg i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32797319 8 - 50472720 aaaaTGGG i calJac3.chr21 I 284 C 0 s saiBol1.JH378168 11010145 8 - 13128814 AAAATGGG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7751409 8 + 14377064 aaaatggg i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4213009 8 - 9889416 aaaatggg i aotNan1.NW_018487195v1 I 290 C 0 s otoGar3.GL873528 20836481 8 + 38779656 gaagtcag i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28871811 8 - 39895921 AAAATGAA i canFam3.chr31 C 0 I 128 a score=34701.000000 s hg38.chr22_KI270732v1_random 34356 3 + 41543 gag s panPan2.chr3 77925746 3 + 205426864 gag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 85630 3 + 12760026 gag i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20258045 3 + 20583478 gag i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 4107 3 - 27701 gag i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204361851 3 - 204787373 gag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 263661 3 - 192460366 gag i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 282104 3 - 11645122 gag i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 263478 3 - 6739814 gag i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 154169 3 - 101219884 gag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 274084 3 - 785044 gag i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 173454 3 - 10971483 gag i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32797327 3 - 50472720 AAA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11010153 3 - 13128814 GAG i saiBol1.JH378168 C 0 I 296 s cebCap1.NW_016107322v1 7751417 3 + 14377064 gag i cebCap1.NW_016107322v1 C 0 I 298 s aotNan1.NW_018487195v1 4213017 3 - 9889416 gaa i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20836489 3 + 38779656 gat i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28871947 3 - 39895921 gag i canFam3.chr31 I 128 C 0 a score=3166323.000000 s hg38.chr22_KI270732v1_random 34359 276 + 41543 -----------------------------------------------------------------------------gttgagttaggtgtttcttacatttctctttagctctgatactatgagtctGAAGTT---------AAGTAATGCAAAGTTGGTAATTAAATCTTCCCCTTTCGTGATGTAGGAGAAAGGGAGAAAGAAAACTTCTGGGTAACTGGATTCCCTTGCAAGTTTATTAGAATTGTAATTATGTAGCATTTTGAATAAAGCATTCATTCTGGAAATCATTAAATTTACTTTTCTTAACTCCGTATTTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA s panPan2.chr3 77925749 276 + 205426864 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctgtttagctctgatactatgagtctGAAGTT---------AAGTAATGCAAAGTTGGTAATTAAATCTTCCCCTTTCATGATGTAGGAGAAAGGGAGAAAGAAAACTTCTGGGTGACTGGATTCCCTTGCAAGTTTATTAGAATTGTAATTATGCAGCATTTTGAATAAAGCATTCATTCTGGAAATTATTAAGTTTACTTTTCTTAACTCCGTATTTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 85633 275 + 12760026 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactatgagtctGAAGTT---------AAGTAATGCAAAGTTGGTAATTAAATCTTCCCCTTTCGTGATGTAGGAGAAAGGGAGAAAGAAAACTTCTGGGT-ACTGGATTCCCTTGCAAGTTTATTAGAATTGTAATTATGTAGCATTTTGAATAAAGCATTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCGTATTTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20258048 276 + 20583478 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactctGAGTCTGAAGTT---------AAGTAATGCAAAGTTGGTAATTAAATCTTCCCCTTTCGTGATGTAGGAGAAAGGGAGAAAGGAAACTTCTGGGTGACTGGATTCCCTTGCAAGTTTATTAGAATTGTAATTATGTAGCATTTTGAATAAAGCATTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCGTATTTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 4110 274 - 27701 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactatgagtctGACGTT---------AAGTAATGCAAAGTTGGTAATTAAATCTTCCCCTTTCGTGATGTAGGAGAAAGGCATGAA--AAACTTCTGGGTGACTGGATTCCCTTGCAAGTTTATTAGAATTGTAATTACGTAGCATTTTGAATAAAGCGTTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCGTATTTTGTCAACTGTGGAAAAATTGGGATTTAGAAATAACCTCTGA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204361854 276 - 204787373 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactatgagtctgaaatt---------AAGTAATGCAAAGTCGGTAATTAAATCCTCCCCTTTTCTGATGTAGGAGAAAGGGAGAAAGAAAACTTGTGGCTGGCTGGATTCCCTTGCAAATTTATTAGAATTGTAATTATGTCGCATTTTGAATAAAGGGTTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCATATGTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 263664 276 - 192460366 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactatgagtctgaaatt---------AAGTAATGCAAAGTCGGTAATTAAATCCTCCCCTTTTCTGATGTAGGAGAAAGGGAGAAAGAAAACTTGTGGCTGGCTGGATTCCCTTGCAAATTTATTAGAATTGTAATTATGTCGCATTTTGAATAAAGGGTTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCATATGTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 282107 276 - 11645122 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactatgagtctgaaatt---------AAGTAATGCAAAGTCGTTAATTAAATCCTCCCCTTTTCTGATGTAGGAGAAAGGGAGAAAGAAAACTTGTGGCTGGCTGGATTCCCTTGCAAATTTATTAGAATTGTAATTATGTCGCATTTTGAATAAAGGGTTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCATATGTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 263481 276 - 6739814 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactatgagtctgaaatt---------AAGTAATGCAAAGTCGGTAATTAAATCCTCCCCTTTTCTGATGTAGGAGAAAGGGAGAAAGAAAACTTGTGGCTGGCTGGATTCCCTTGCAAGTTTATTAGAATTGTAATTATGTCGCATTTTGAATAAAGGGTTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCATATGTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 154172 276 - 101219884 -----------------------------------------------------------------------------gttgagttaagtgttccttaaatttctctttagctctgatactatgagtctgaaatt---------AAGTAATGCAAAGTTGGTAATTAAATCCTCCCCTTTTCTGATGTAGGAGAAAGGGAGAAAGAAAGCTTCTAGCTGGCTGGATTCCCTTGCAAGTTTATTAGAATTGTAATTATGTAGCATTTTGAATAAAGGGTTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCATATTTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 274087 276 - 785044 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactatgagtctgaaatt---------AAGTAATGCAAAGTCGGTAATTAAATCCTCCCCTTTTCTGATGTAGGAGAAAGGGAGAAAGAAAACTTGTGGCTGGCTGGATTCCCTTGCAAATTTATTAGAATTGTAATTATGTCGCATTTTGAATAAAGGGTTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCATATGTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 173457 276 - 10971483 -----------------------------------------------------------------------------gttgagttaggtgtttcttaaatttctctttagctctgatactatgagtctgaaatt---------AAGTAATGCAAAGTTGGTAATTAAATCCTCCCCTTTTCTGATGTACGAGAAAGGGAGAAAGAAAACTTGTGGCTGACTGGATTCCCTTGCAAGTTTATTGGAATTGTAATTATGTAGCATTTTGAATAAAGGGTTCATTCTGGAAATCATTAAGTTTACTTTTCTTAACTCCATATTTTGTCAACTGTGGAAAAATTGGGATTTAGGAGTAACCTCTGA i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32797330 273 - 50472720 -----------------------------------------------------------------------------GTTGAGTTAGGTATTTCTTAAATTTCTCTTTACCTCTGATACTATGAATCTGAAATG---------AAGTAATACAAAGTGAGTAATTAAATCCTCCTCTTTCTTGATATAGGAGAAAGGGAAAAAAAA---TTCTGGGTGGCTGGATTCCCTTCCAAGTGTACTAGAAATATAATTACATAGCATTTTGAATAAAGTATTTATTATGGAAATCATTAAGTTTACTTTCCTTAACTCCATATTTTGTCAACAATGGATAAATTGAGATTTAGGAGTCATCTGTGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11010452 276 - 13128814 -----------------------------------------------------------------------------GTTGAGTTAGGTATTTCTTAAATTTCTCTTTAGCTCTGATACTATGAATATGAAATG---------AAGTAATGCAAAGTGAGTAATTATATCCTCTTCTTTCTTGGTGTAGGAGAAAGGGAAAAAGAAAATTTCTGGGTGGCTGGATTCCCTTCCAAGTTTACTAGAAATATAATTATATAGCATTTTGAATAAAGTGTTCATTCTGGAAATCATTAGGTTTACTTTTCTTAACTCCATATTTTGTCAACAATGGATAAATTGAGATTTAGGAGTCATCTCTGA i saiBol1.JH378168 I 296 C 0 s cebCap1.NW_016107322v1 7751718 276 + 14377064 -----------------------------------------------------------------------------gttgagttaggtatttcttatatttctctttagctctgatactatgagtctGAAATG---------AAGTAATGCAAAGTGAGTAATTAAATCCTCCTGTTTCTTGGTGTAGGAGAAAGGGAGAAAGAAAATTTCTGTGTGGCTGAATTCCCTTCCAAGTTTACTAGAAATATAATTACATAGCATTTTGAATAAAGTGTTCATTCTGGAAATCATTAAGTTTACTTTCCTTAACTCCATATTTTGTCAACAGTGGATAAATTGAGATTTAGGTGTCATCTCTGA i cebCap1.NW_016107322v1 I 298 C 0 s aotNan1.NW_018487195v1 4213020 275 - 9889416 -----------------------------------------------------------------------------gttgagttaggtatttcttaaatttct-tttagctctgatactatgagtctGAAATG---------AAGTAATGCAAAGTGAGTAATTAAATCCTCCTCTTTCTTGATGTAGGAGAAAGGGAGAAAGAAAATTTCTGGGTGGCTGGATTCCCTTCCAAGTTTACTGGAAATATAATTATATAGCATTTTGAATAAAGTGTTCATTCTGGAAATCATTAAGTTTACTTTCCTTAACTCCATATTTTGTCAACAATGGATAAATTGAGATTTAGGAGTCATTTCTGA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20836492 271 + 38779656 -----------------------------------------------------------------------------gttgagttaagcattccttaaatttccttgtaactctgataC--AGAGTCAGAAATG---------AAGTAATGCCAAACGGGTAATGAAATGCCCCTCTTTCTTGATGTGGGAGAACGGGAGAAGCCAAACTTCTGTGGGACTGGATTCCCTCTCAAGTTCACTGGGATTACAGTTGTGTAGCATTTTGAATAAAAGGTCTATTGTGGAAATCATTAAATTTACTTTCCTTAGCT---TATTTCATCAACTGTGGAAAAATTGGGTTTTAACAGAAATCTCTGA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28871950 358 - 39895921 attctagccccttcttcctctgcccctcccccctcaaataaataaatatataaatcttaaaaaaTAAAAtaaaatgagatgggttagatggtccttaaattttcctttagctctgatattgtgagtctGAAATGAAGTAATACAAGTAATACAAAATGAGTAATTAAGTCCTCCTCTTTCTTAATGTGGGAGAAAGGGAGAAG---AAGTTCTAGATGCCAAGATTCCCCACCAAGTTTGCTAGAATTATGATTATGCAGAATTTTGAATACAGGGCTTATTCTGGAAATCATTAAATTTACTTTCCTTAGCTCCATATTTTGTCAATTGTGGAAAAATTGGGATCTGGG-GTAATCTTTAA i canFam3.chr31 C 0 I 152 a score=1878105.000000 s hg38.chr22_KI270732v1_random 34635 175 + 41543 TTTAAAATTCCACC-------------------------TGTTAATCATTTAAATTGTAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatgcgctattatactgtattatatatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatgaaaggtatagttttgaact-------- s panPan2.chr3 77926025 175 + 205426864 TTTAAAATTCCACC-------------------------TGCTAACCATTTAAATTGTAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatgcattattatactgtattatatatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatgaaaggtatagttttgaact-------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 85908 173 + 12760026 TTTAAAATTCCACC-------------------------TGTTAATCATTTAAATTGTAGTCTTGTAATTTCCTAACTTTGGTCTTGAAggtgtttatcattcttatgc--tattatactgtattatatatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatgaaaggtatagttttgaact-------- i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20258324 175 + 20583478 TTTAAAATTCCACT-------------------------TGCCAACCATTTAAATTGTAGTCTTGTGATTTCCTAACTTTGGTCTTGAAGGTGTTTATCATTCTTATGCGTTATTATACTGTATTATATATTTATGCAACAT---AAAATGTATGGTTTTAACTATTGTAAATGTTTACATATGAAAGGTATAGTTTTGAACT-------- i ponAbe2.chr3_random C 0 M 200 s nomLeu3.chrUn_GL398098_1 4384 175 - 27701 TTTAAAATTCCACC-------------------------TACTAATCATTTAAATTGCAGTCTTGTAATTTCCTAACTTTGGtcttgaatgtgtttatcattcttacgcgttattatactgtattatatatttatacaacat---aaaatgtatagttttaactactgcacatgtttacatatgaaaggtgtagttttgaact-------- i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362130 175 - 204787373 TTTAAAATTCCACC-------------------------TGCTAACCATTTAAATTATAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatgcattattatactgtgttatctatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatggaaggtatagttttagact-------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 263940 175 - 192460366 TTTAAAATTCCACC-------------------------TGCTAACCATTTAAATTATAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatgcattattatactgtgttatctatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatggaaggtatagttttagact-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 282383 175 - 11645122 TTTAAAATTCCACC-------------------------TGCTAACCATTTAAATTATAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatgcattattatactgtgttatctatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatggaaggtatagttttagact-------- i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 263757 175 - 6739814 TTTAAAATTCCACC-------------------------TGCTAACCATTTAAATTATAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatgcattattatactgtgttatctatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatggaaggtatagttttagact-------- i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 154448 175 - 101219884 TTTAAAATTCCACC-------------------------TGCTAACCATTTAAATTGTAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatgcattattatactgtgttatgtatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatggaaggtatagctttagact-------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 274363 175 - 785044 TTTAAAATTCCACC-------------------------TGCTAACCATTTAAATTATAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatgcattattatactgtgttatctatttatgcaacat---aaaatgtatagttttaactattgtacatgtttacatatggaaggtatagttttagact-------- i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 173733 175 - 10971483 TTTAAAATTCCACC-------------------------TGCTAACCATTTAAATTGTAGTCTTGTAATTTCCTAACTTTGGtcttgaaggtgtttatcattcttatacattattatactgtgttatatatttatgcaacat---aaaatgtatagttttaactattgtacatccttacatatagaaggtgtagttttggact-------- i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32797603 171 - 50472720 TTTAAAATTCCACC-------------------------TGAAAACTATTTAAATTGTAGTATTGTAATTTTCTAATTTTTGTCTCGAAggtgtt----attcttatgcattattatactgtattacatatttatgcaacat---aaaatgtatagttttaattattctacatgtttacatatgaaaggcatagttttgaacc-------- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11010728 175 - 13128814 TTTAAAATTCCACT-------------------------TGATAACTATTTAAATTGTAGTCTTATAATTTCCTAACTTTGGtcttgaaagtgtttatcattcttatgcattattatgctgtattacatatttatacaacat---aaaatgtatagttttaattattctacatgtttacatatgaaaggcatggttttggact-------- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7751994 150 + 14377064 TTTAAAATTCCACC-------------------------TGATAACTATTTAAACTGTAGTCTTATAATTTCCTAATTTTGGtcttgaaagtgtttatcattcttatgcattcttatactgtattacatatttatgcaacat---aaaatgtatagttttgattattctacatgttta--------------------------------- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4213295 175 - 9889416 TTTAAAATTCCACC-------------------------TGATAACTATTTAAATTGTAGTCTTGTAATTTCCTCACTTTGGTCTTGAAGGTATTTATCATTCTTATGCGTTATTATACTGTATTACATATTTATGCAACAT---AAAATGTATAGTTTTAATTATTCTACACGTTTACATATGAAAGGCATAGTTTTGAACC-------- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20836763 171 + 38779656 TTTGACATTTCCCT-------------------------TGATAACTACTTAAATCGTAATCTTGCAATTtcctgattttggttttgaagatatttatcatatttctgcattattagacattattccatctttgtgc-atatagaaaaatgtctcgtttcacctattttacaagtttacccataaaagg------tttgaacg-------- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28872460 195 - 39895921 ttagaagttcaaccggctgagccaccccggcaccccTCTTGATAACTATTTAAATTGTAATCGTGTAATTTCCTAATTTGCACTGTGGAGGTGTTTACCATTTTTATGA-------------AGtacatatttatgcag-atgcaaaaatatataattttaacaatttttc--ttttgcatataaaatatatagtattatagtatttaact i canFam3.chr31 I 152 C 0 a score=187759.000000 s hg38.chr22_KI270732v1_random 34810 19 + 41543 tatcattattcaatttgct s panPan2.chr3 77926200 19 + 205426864 tatcattattcaatttgct i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 86081 19 + 12760026 tatcattattcaatttgct i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 4559 19 - 27701 tatcattattaaatttgct i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362305 19 - 204787373 tatcgttatttaatttgct i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264115 19 - 192460366 tatcgttatttaatttgct i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 282558 19 - 11645122 tatcgttatttaatttgct i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 263932 19 - 6739814 tatcgttatttaatttgct i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 154623 19 - 101219884 tatcgttatttaatttgct i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 274538 19 - 785044 tatcgttatttaatttgct i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 173908 19 - 10971483 tatcgttatttaatttgct i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32797774 19 - 50472720 tatcattcttcaatttgct i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11010903 19 - 13128814 tatcattattcaatttgct i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7752144 16 + 14377064 ---cattattcaagttgct i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4213470 19 - 9889416 TATCATTATTCAATTTGCT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20836934 19 + 38779656 tttcattttgcaagttgct i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28872655 19 - 39895921 tatcattctgcaacttgct i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20258499 200 + 20583478 M a score=1284027.000000 s hg38.chr22_KI270732v1_random 34829 126 + 41543 agttttgcttcactattcatt-tttgacac--a-----------tccatattagtacatgcaactcaagtttattcttttgagctactgtatatcattcaaatgtatgaataaataaccttgctttggtggacatttaag s panTro5.chr20 36382427 126 - 66533130 agttttgcttcactattcatt-tttgacac--a-----------tccatattagtacatgcaactcaagtttattcttttgatctagtgtatatcattcaaatgtatgaataaataaccttgctttggtggacatttaag i panTro5.chr20 N 0 C 0 s panPan2.chr3 77926219 128 + 205426864 agttttgcttcactattcatt-tttgacactta-----------tctgtattagtacatgcaactcaagtttattcttttgagctactgtatatcattcaaatgtatgaataaataaccttgcttcggtgaacatttaag i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 86100 126 + 12760026 agttttgcttcactattcatt-tttgacactta-----------tccatattagtacatgcaactcaagttta-tcttttgagctactgtatatcattcaaatgtatgaataaataa-cttgctttggtggacatttaag i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 4578 128 - 27701 agttttgcttcactattcatt-ttggacactta-----------tccatattagtacatgcaactcaagtttattctttggcgctactgtatatcattcaaatgtatgaataaataaccttgctttggtggacatttaag i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362324 122 - 204787373 agttttgcttcactatttatt-tttgacactta-----------tccatattagtacatgcaactcaagtttattcttttgagctattgtgtatcattcagatgtatg----aataa--atgctttggtggacatttaag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264134 126 - 192460366 agttttgcttcactatttatt-tttgacactta-----------tccatattagtacatgcaactcaagtttattcttttgagctattgtgtatcattcagatgtatgaataaataa--atgctttggtggacatttaag i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 282577 126 - 11645122 agttttgcttcactatttatt-tttgacactta-----------tccatattagtacatgcaactcaagtttattcttttgagctattgtgtatcattcagatgtatgaataaataa--atgctttggtggacatttaag i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 263951 126 - 6739814 agttttgcttcattatttatt-tttgacactta-----------tccatattagtacatgcaactcaagtttattcttttgagctattgtgtatcattcagatgtatgaataaataa--atgctttggtggacatttaag i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 154642 126 - 101219884 acttttgcttcactatttatt-tttgacactta-----------tccatattagtacatgcaactcaagtttattcttttgaactattgtgtatcattcagatgtatgaataaataa--atgctttggtggacatttaag i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 274557 126 - 785044 agttttgcttcactatttatt-tttgacactta-----------tccatattagtacatgcaactcaagtttattcttttgagctattgtgtatcattcagatgtatgaataaataa--atgctttggtggacatttaag i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 173927 126 - 10971483 agttttgcttcactatttatt-tttgacactta-----------tccatattagtacatgtaactcaagtttattcttttgagctattgtgtatcattcagatgtatgaataaataa--atgctttggtggacatttaag i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32797793 126 - 50472720 agttttgctttactattcatt-tttgacac--a-----------tccatattggaacatgtaacacaagtttattctttaaagctactgtatatcattcaaatgtatgaataaataaccttactgtagtggacatttaag i calJac3.chr21 C 0 I 2015 s saiBol1.JH378168 11010922 122 - 13128814 agttgggcttcactattcatt-tttgaca-----------------cttattggaacatgtaactcacgtttattctttaaaactactgtatataattcaaatgtatgaataaataaacttgctttagtggacatttaag i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7752160 127 + 14377064 agctttgcttcactattcagt-tttggtgctta-----------tccatattggaacatgtaactcaagtttatt-tttaaagctactgtatatcattcaaatgtatgaataaataactttgctttagtggacatttaag i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4213489 128 - 9889416 AGTTTTGCTTCACTATTCATT-TTTGACGCTTA-----------TCCATATTGGAACATGTAACTCAAGTTTATTCTTTAAAGCTACTGTATTTCATTCAAATGCATGAATAAATAACCTTGCTTTAGTGGACATTTAAG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20836953 138 + 38779656 attgttgcttcactatttgttatttagttattattattagttattccatatgtatacatgggactcaagttgtttcattctagttagtatatgtcatcca-atgtatgaacagataacactccattactggatattaac- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28872674 128 - 39895921 atttttgctcaacttttaaat-tttgacattta-----------tctatgttgttacacatggcttaagtttattcattttacctatcatatatcattcaattatattaataAAGAACACCTATTTGGTGGATATTTAAG i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20258499 200 + 20583478 M a score=3455604.000000 s hg38.chr22_KI270732v1_random 34955 314 + 41543 tattttcatgtgtcagtatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata------------------------------tataatgtttgtatatatgaaagt-cctgtgggtt------atatatctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTT--AATTACTGCCATAATTAGAATACCACTTAAA-----ACTTGAGAATATTTTCAAG---GGTATTTATGCTAAACTTACATAAGTGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- s panTro5.chr20 36382553 315 - 66533130 tattttcatgtgtcagtatgaagagcagtttcaaaatgaacattcaaatatacattgtcata------------------------------tataatatttgtatatatgaaagttcctgtgggtt------atatctctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTTAGTAAACAAGATTAGCTTT-TGTACATGATGAGTCTCTTTATTCAGTT--AATTACTGACATAATTAGAATACCACTTAAA-----ACTTGAGAATATTTTCAAG---GGTATTTATGCTAAACTTACAGAAATGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- i panTro5.chr20 C 0 C 0 s panPan2.chr3 77926347 321 + 205426864 tattttcatatatcagtatgaaaagcagtttcaaaatgaacagtcaaatatacattgtcata----------------tatatg--------tataatatttgtatatatgaaagttcctgtgggtt------atatatctgaaatcaaaattacAAGTGTTTTGTAATGTCTATAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTT--AATTACTGACATAATTAGAATACCACTTAAA-----ACTTGAGAATATTTTCAAA---GGTATTTATGCTAAACTTACATAAATGTGTTGAAAAGTC-CTT-TTGTCTATATGTAG- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 86226 315 + 12760026 tattttcatgtgtcagtatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata------------------------------tataatatttgtatatatgaaagttcctgtgggtt------atatatctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTT--AATTACTGACATAATTAGAATACCACTTAAA-----ACTTGAGAATATTTTCAAG---GGTATTTATGCTAAACTTACATAAATGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 4706 323 - 27701 tattttcatgtatcagtatgaaaagcagtttccaaatgaacagtcAAATATACATTGTCATA----------------TATGTG--------TATAATATTTGTATATATGAAGGTTCCTGTGGGTC------ACATATCTGAAATCAAAATTACAAGTGTTTTGTACCTTCTAGAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGCATCTCTTTATTCAGTTAAAATTACTGACATAATTAGAATACCACTTAAA-----ACTTGAGAATATTTTCAAG---GGTATTTATGCGAAACTTATATAAATGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362446 323 - 204787373 tattttcatgtatcaatatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata----------------tatatg--------tataatatttgaatatatgaaagttcctgtgggtt------atgtatctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTTAAAATTACCGACATAATTAGAATACCACTTAAC-----CCTTGAGATTATTTTCAAG---GGTATTTATGCTAAACTTACATAAATGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264260 323 - 192460366 tattttcatgtatcaatatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata----------------tatatg--------tataatatttgaatatatgaaagttcctgtgggtt------atgtatctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTTAAAATTACCGACATAATTAGAATACCACTTAAC-----ACTTGAGATTATTTTCAAG---GGTATTTATGCTAAACTTACATAAATGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 282703 323 - 11645122 tattttcatgtatcaatatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata----------------tatatg--------tataatatttgcatatatgaaagttcctgtgggtt------atgtatctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTTAAAATTACTGACATAATTAGAATACCACTTAAC-----ACTTGAGATTATTTTCAAG---GGTATTTATGCTAAACTTACATAAATGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 264077 323 - 6739814 tattttcatgtatcaatatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata----------------tatatg--------tataatatttgcatatatgaaagttcctgtgggtt------atgtatctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTAAGTAAACGAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTTAAAATTACTGACATAATTAGAATACCACTTAAC-----ACTTGAGATTATTTTCAAG---GGTATTTATGCTAAACTTACATAAATGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 154768 323 - 101219884 tattttcatgtatcaatatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata----------------tatatg--------tataatatttgcatatatgaaagttcctgtgggtt------atgtatctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTTAAAATGACTGACATAATTAGAATACCACTTAAC-----ACTTAAGATTATTTTCAAG---GGTATTTATGCTAAACATACATAAATGTGTTGAAAAGTC-CTT-TTGTACATATGTAG- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 274683 323 - 785044 tattttcatgtatcaatatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata----------------tatatg--------tataatatttgcatatatgaaagttcctgtgggtt------atgtatctgaaatcaaaattacAAGTGTTTTGTAACTTCTATAATTAATTTTACTCTCAATTTTAAGTAAACGAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTTAAAATTACTGACATAATTAGAATACCACTTAAC-----ACTTGAGATTATTTTCAAG---GGTATTTATGCTAAACTTACATAAATGTGTTGAAAAGTC-CTT-TTGTATATATGTAG- i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 174053 323 - 10971483 tattttcatgtatcaatatgaaaagcagtttcaaaatgaacattcaaatatacattgtcata----------------tatatg--------tataatatttgcatatatgaaagttcctgtgggtt------atgtatctgaaatcaaaattacAAGTGTTTTGTGACTTCTGTAATTAATTTTACTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATGAATCTCTTTATTCAGTTAAAATTACTGACATAATTAGAATACCACTTAAC-----ACTTGAGATTATTTTCAAG---GGTATTTATGCTAAACTTACATAAATGTGTTAAAAAGTC-CTT-TTGTATATATGTAG- i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32799934 306 - 50472720 tatttTTATGTATCAGTATGAAAAGCAGTTTCAAAATGAACATTCAAATATACATTGTAATA----------------TTTATG--------TATAATATTTGTATATATGAAATTTCCTGTGGGTT------ATATATCAGAAATCAAGATTACAAGTGT----------------TTAATTTTACTCTCAATTTTAACTAAACAAAATTAGTTTT-TGTGCATGATTAATCTCTTTAGTCAGTTAAAATTACTAACATAATTATAATACTACTTAAA-----ACTTGAGAATATTTTCAA----GGTTATTATGCCAAACTTACATAAATATGTTGAAAAGTT-CTT-TTGTATGTGTGTAG- i calJac3.chr21 I 2015 C 0 s saiBol1.JH378168 11011044 322 - 13128814 tattttcttgtatcagtatgaaaagcagtttcaaaatgaacattcaaatatacattgtcatg----------------tatatg--------tatattatttgtatatatgaaagttcctgtaggtt------atatatctGAAATCAAGATTACAAGTGTTTTATGATTTTTGTAATTAATTTTATTCTCAATTTTAAGTAAACAAGATTAGTTTT-TGCACATGATTAATCTCTTTATTCAGTTAAAATTACTAACATAATTATAATACCACTTAAA-----ACTTGAAAATATTCTCAA----GGTAATTATGCCAAACTTACATAAATGTGTTGAAAAGTT-CTT-TTGTATGTGAGTAG- i saiBol1.JH378168 C 0 M 1195 s cebCap1.NW_016107322v1 7752287 321 + 14377064 tattttcatgtatcagtatgaaaagcagtttcgaaatgaacattcaaatatacattatcata----------------tatatg--------tgtaatatttgtatatatgaaagttcctgtggctt------atatatctgaaaTCAAGATTACAAGTGTTTTATGATTTTTATAATTAATTTGACTCTCAATTATAAGTAAACAAGATTAGTTTT-TGCACATGATTAATCTC-TTATAAAGTTAAAATTACTAACATAATTATAATACCACTTAAC-----ACTTGAAGATATTTTCAA----GGTAATTATGCCAAACTTACATAAATGTGCTGAAAAGTT-CTT-TTGTATGTGTGTAG- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4213617 320 - 9889416 TATTTTCATGTA-CAGTATCAATAGCAGTTTCAAAATGAACATTCAAATATACATTGTCATA----------------TATATT--------TATAATGTTTGTATATATGAAAGTTCCTGTGGGTT------ATATATCTGAAATCAAGATTACAAGTGTTTTATGATTTTTATAATTAATTTTACTCTCAATT-TAAGTAAACAAGATTAGTTTT-TGCACATGATTAATCTCTTTATTCAGTTAAAATTACTAACATAATTATAATACCACTTAAA-----ACTTGAAAATATTTTCAA----GGTAATTATACCAAGCTTACATAAATGTGTTGAAAAGTT-CTT-TTGTACGTGTGTAG- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20837091 304 + 38779656 tatttttatttatc-------aaaacactttcaaaatgaacagggggatatattttatcata----------------tata----------aattatgtaagtgtctatgagagtttctatgtgtt------ttttatctggagctggaattaccagTGTTTTGTGA----------------GACTCTCAGTTTTAAAGAAATAAAGTT---TTG-TTTACATGATGAATCTCTTCCTTTCATTAAAATTACTGCTATAACTAGAATCCCTCTCACCTCACTTCTTGGGAATATTTATGAGATAAATATTTATGGTAAACTTACATAAGTGTGCTGACAAGGC-CTTACTGCATATGTACAG- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28872802 343 - 39895921 CATTTTAATTTTTCATTATTAACAACAGTGTCAAAGCAAACATTCAAGaatattttatcataaaaaagaatattttattatatGTCAGATATTATATTTTATCTCTGTATGATAGTTCCTATGGTTTATATACATATATCTGAAATTGGAATTGCAAATGTTTTGTGATTTCCATA--------TATTCTCCATTTTAAGTATACAAGACTAGTTTTGTGTACATGATAAATC----CATGTAGTTAAAGGTACCTATATAAGTAGAATACTA-TCAAA-----TTAAAAATATATTTTATGA---GATACTTAGGCTAAACTTACATAAATGTGTTGAAAATTCATTT-TTGTATGTGTGCATG i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20258499 200 + 20583478 M a score=22552.000000 s hg38.chr22_KI270732v1_random 35269 2 + 41543 AG s panTro5.chr20 36382868 2 - 66533130 AG i panTro5.chr20 C 0 C 0 s panPan2.chr3 77926668 2 + 205426864 AG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 86541 2 + 12760026 AG i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 5029 2 - 27701 AG i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362769 2 - 204787373 AG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264583 2 - 192460366 AG i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283026 2 - 11645122 AG i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 264400 2 - 6739814 AG i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155091 2 - 101219884 AG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275006 2 - 785044 AG i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 174376 2 - 10971483 AG i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32800240 2 - 50472720 AT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7752608 2 + 14377064 AG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4213937 2 - 9889416 AG i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20837395 2 + 38779656 AG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28873145 2 - 39895921 AG i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20258499 200 + 20583478 M e saiBol1.JH378168 11011366 1195 - 13128814 M a score=1054978.000000 s hg38.chr22_KI270732v1_random 35271 126 + 41543 ATTACATGGTATGTTAAATTCATCAATTTGCCTAAATATCAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGACTGAACTCCAATATGTATATTGGGAGTACTTTTTAA-CATTCAT s panTro5.chr20 36382870 126 - 66533130 ATTACATGGTATGTTAAATTCATCAATTTGCCTAAATATCAAGTTATACTTAAGTAGTGTCCATACACAACTTTTTTGCTTGACTGAACTCCAATATGTATATTGGGAGTACTTTTTAA-CATTCTT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77926670 126 + 205426864 ATTACATGGTATGTTAAATTCATCAATTTGCCTAAATATCAAGTTACACTTAAGTAATGTCCATACACAATTTTTTTGCTTGACTGAACTCCAATATGTATATTGGGAGCACTTTTTAA-CATTCAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 86543 126 + 12760026 ATTACATGGTATGTTAAATTCATCAATTTGCCTAAATATCAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGACTGAACTCCAATATGTATATTGGGAGTACTTTTTAA-CATTCAT i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 5031 126 - 27701 ATTACATGGTATGTTAAATTCATCAATTTGCCTAAATATCAAGTTATACTTAAGTAGTGTCCATACACCATGCTTTTGCTTGACTGAACTCCAATATGTATATCGGGAGTACTTTTTAA-CATTCAT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362771 126 - 204787373 ACTACATGGTATATTACATTCATTAATTTGCCTAAGTATTAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGGCTGAACTCCAATGTATATATTGGGAGCACTTTTTAA-CTTTCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264585 126 - 192460366 ACTACATGGTATATTACATTCATTAATTTGCCTAAGTATTAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGGCTGAACTCCAATGTATATATTGGGAGCACTTTTTAA-CTTTCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283028 126 - 11645122 ACTACATGGTATGTTACATTCATTAATTTGCCTAAGTATTAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGGCTGAACTCCAATGTGTATATTGGGAGCACTTTTTAA-CTTTCAT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 264402 126 - 6739814 ACTACATGGTATATTACATTCATTAATTTGCCTAAGTATTAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGGCTGAACTCCAATGTGTATATTGGGAGCACTTTTTAA-CTTTCAT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155093 126 - 101219884 ACTACACGGTATATTACATTAAGTAATTCGCCTGAGTATTAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGGCTGAACTCCAGTGTGTATATTGGGAGCACTTTTTAA-CTTTCAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275008 126 - 785044 ACTACATGGTATATTACATTCATTAATTTGCCTAAGTATTAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGACTGAACTCCAATGTGTATATTGGGAGCACTTTTTAA-CTTTCAT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 174378 126 - 10971483 ACTACATGGTATATTACATTCATTAATTTGCCTAAGTATTAAGTTATACTTAAGTAGTGTCCATACACAATTTTTTTGCTTGGCTGAACTCCAATGTGTATATTGGGAGTACTTTTTAA-CATTCAT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32800242 122 - 50472720 GTGACATGGTATGTTAAACTCATCAGTTTGCCAAAGTATCAAGTTA----TAAGTAGTGTCCATATACAA-TTTTTTGCTTCCCTGAACTCCAATATGTATATTGAGAGTACTTTTTAAGCATTCAT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7752610 122 + 14377064 ATGACATGGTATGTTAAACTCATCAGTTTGCCAAAGTATCAAGTTA----TAAGTAGTGCCCATATACAA-TTTTTTGCTTGCCTGAACTCCAATATGTATATTGGGAGTACTTTTTAACCATTCAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4213939 123 - 9889416 ATGACATGATATGTTAAACTCACCAGTTTGCCAAAGTATCAAATTA----TAAGTAGTGCCCATATACAATTTTTTTGCTTGCCTAAACTCCAATATGTATATTGGGAGTACTTTTTAACCATTCAT i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 28873147 106 - 39895921 -----ATGACATGT-------ATCAATTTACCTCAA---CAAGTTA----TAACTAGTGTCC-TATATAA-TTTTTTGCCTGACTGATTTTCAGTAGATGATTTGGTAATGTTTTTTAAATATTCAC i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20258499 200 + 20583478 M e saiBol1.JH378168 11011366 1195 - 13128814 M e otoGar3.GL873528 20837397 0 + 38779656 C a score=3423.000000 s hg38.chr22_KI270732v1_random 35397 1 + 41543 A s panTro5.chr20 36382996 1 - 66533130 A i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 86669 1 + 12760026 A i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 5157 1 - 27701 A i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362897 1 - 204787373 G i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264711 1 - 192460366 G i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283154 1 - 11645122 G i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 264528 1 - 6739814 A i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155219 1 - 101219884 G i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275134 1 - 785044 G i manLeu1.NW_012099043v1 C 0 C 0 s nasLar1.chrUn_JMHX01153122v1 481 1 + 548 G i nasLar1.chrUn_JMHX01153122v1 N 0 N 0 s colAng1.NW_012123820v1 174504 1 - 10971483 G i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32800364 1 - 50472720 A i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7752732 1 + 14377064 A i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4214062 1 - 9889416 A i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 28873253 1 - 39895921 A i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20258499 200 + 20583478 M e saiBol1.JH378168 11011366 1195 - 13128814 M e otoGar3.GL873528 20837397 0 + 38779656 C e panPan2.chr3 77926796 0 + 205426864 C a score=950035.000000 s hg38.chr22_KI270732v1_random 35398 97 + 41543 GGTTAAATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGACGAATGCTTAGAATA-AAGATTAAAGATGAATGAGCTTTCATATTAATCAT s panTro5.chr20 36382997 97 - 66533130 GGTTAAATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAACTCAGATGAATGCTTAGAATA-AAGATTAAAGATGAATGAGCTTTCATATTAATCAT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77926796 97 + 205426864 GGTTAAATGGCCTGTTTTGGAAAACGATATT-AAAAATGTAATTCAGATGAATGCTTAGAATA-AAGATTAAAGATGAATGAGCTTTCATATTAATCAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 86670 97 + 12760026 GGTTAAATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGCTTAGAATA-AAGATTAAAGATGAATGAGCTTTCATATTAATCAT i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 5158 92 - 27701 GGTTAAGTGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGCT-----TA-AAGATTAAAGATGAATGAGCTTTCATATTAATCAT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362898 97 - 204787373 GGTTACATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGCTTAGAATA-AAGGTTAAAGATGAATGAGCTTTCATATTAATCAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264712 97 - 192460366 GGTTACATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGCTTAGAATA-AAGGTTAAAGATGAATGAGCTTTCATATTAATCAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283155 97 - 11645122 GGTTACATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGCTTAGAATA-AAGGTTAAAGATGAATGAGCTTTCATATTAATCAT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 264529 97 - 6739814 GGTTACATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGTTTAGAATA-AAGGTTAAAGATGAATGAGCTTTCATATTAATCAT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155220 97 - 101219884 GGTTACATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGCTTAGAATA-AAGGTTAAAGATGAATGAGCTTTCATATTAATCAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275135 97 - 785044 GGTTACATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGTTTAGAATA-AAGGTTAAAGATGAATGAGCTTTCATATTAATCAT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 174505 97 - 10971483 GGTTACATGGCCTGTTTTGGAAAATGATATT-AAAAATGTAATTCAGATGAATGCTTAGAATA-AAGGTTAAAGATGAATGAGCTTTCATATTAATCAT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32800365 97 - 50472720 GGTTAAATGGCCTGTTTTGGAAAGTAACATT-AAAAAAATAATTCAGATGAATGCTTAGAATA-AAGGTTAAAGACAAATGAGGCTTTATATTAATCAT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7752733 96 + 14377064 GGTTAAATGGTATGTTTTGGAAAATGACATT--AAAAAATAATTCACATGAATGCTTAGAATA-AAGGTTAAAGACGAATGAGCTTTCATATTAATCAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4214063 97 - 9889416 GGTTAAATGGCCTGTTTTGGAAAATGACATT-AAAAAAATAATTCAGATGAATGCTTAGAATA-AAGGTTAAAGATGAATGAGCTTTCATATTAATCAT i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 28873254 99 - 39895921 GGTTTAATGGCCTATTTTGCAGACTGCTATTGAAAAATATCATTCAGATGAATGTTTAGAATATGAGGTTAAAGATGAGTGAGTTTTCATATTAATCAT i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20258499 200 + 20583478 M e saiBol1.JH378168 11011366 1195 - 13128814 M e otoGar3.GL873528 20837397 0 + 38779656 C a score=491785.000000 s hg38.chr22_KI270732v1_random 35495 63 + 41543 CAATATGACAATCCTAAAGGGAAGCATGATTTTCAAATGTACCTCCTTGTAAGCAGGATAATT s panTro5.chr20 36383094 63 - 66533130 CAATATGACAATCCTAAAGGGAAGCATGATTTTCAAATGTACCTCCTTGTAAGCAGGATAATT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77926893 63 + 205426864 CAATATGACAATCCTAAAGGGAAGCATGATTTTCAAATGTACCTCCTTGTAAGCAGGATAATT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 86767 63 + 12760026 CAATATGACAATCCTAAAGGGAAGCATGATTTTCAAATGTACCTCCTTGTAAGCAGGATAATT i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 5250 63 - 27701 CAGTATGACAACCCTAAAGGGAAGCATGATTTTCAAATGTACCTCCTTGTAGGCAGGATAATT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204362995 53 - 204787373 CAATATGACAATCC-AAAGGGAAG---------CAAATGTACCTCCTTGTTAGCAAGATAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264809 53 - 192460366 CAATATGACAATCC-AAAGGGAAG---------CAAATGTACCTCCTTGTTAGCAAGATAATT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283252 53 - 11645122 CAATATGACAATCC-AAAGGGAAG---------CAAATGTACCTCCTTGTTAGCAAGATAATT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 264626 53 - 6739814 CAATATGACAATCC-AAAGGGAAG---------CAAATGTACCTCCTTGTTAGCAAGATAATT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155317 53 - 101219884 CAATATGACAATCC-AAAGGGAAG---------CAAATGTACCTCCTTGTAAGCAAGATAATT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275232 53 - 785044 CAATATGACAATCC-AAAGGGAAG---------CAAATGTACCTCCTTGTTAGCAAGATAATT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 174602 54 - 10971483 CAATATGACAATCCTAAAAGGAAG---------CAAATGTACCTCCTTGTAAGCAAGGTAATT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32800462 63 - 50472720 CAGTGTGACAATCCTAAAGAGAAACATGATTTTCAAATATATCTCCTTGTAAGCAGGACAATT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7752829 63 + 14377064 CAATGTGACAATCCTAAAGGGAAGCATGATTTTCAAATATATCTCCTTGTAAGCAGGATAATT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4214160 63 - 9889416 CAATATGACAATCCTAAAGGGAAGCATGATTTTCAAATATATCTCCTTGTAAGCAGGATAATT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20837397 30 + 38779656 ---------------------------------CAATGTTATCTACCTATAAGCAGGATCATT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28873353 63 - 39895921 CATTGTTAGAATCCCAAAGAGAGAGATGATTTTCAAATATATCTCCTTGTAAACAGGGTACTT i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20258499 200 + 20583478 M e saiBol1.JH378168 11011366 1195 - 13128814 M a score=1551064.000000 s hg38.chr22_KI270732v1_random 35558 139 + 41543 CAGAAATGCACAGTGCATATTAGATATGGGATTTGAGTCGTAGTATATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA------CCCCACTGAA----TATGCAGAGTTTAAGATGCAATGGCCAGAAGACATGAAAGTGTC s panTro5.chr20 36383157 139 - 66533130 CAGAAATGCACAATGCATATTAGATATGGGATTTGAGCCGTAATATATTTCTCTAAGAATGTAATTTATTATACT-TTCACATCCA------CCCCACTGAA----TATGCAGAGTTTAAGACGCGATGGCCAGAAGACATGAAAGTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr3 77926956 139 + 205426864 CAGAAATGCACAATGCATATTAGATATGGGATTTGAGTCATAGTATATTTCTCTAAGAATGTAATGTATTTTACT-TTCACATCCA------CCCCACTGAA----TATGCAGAGTTTAAGACGCAATGGCCAGAAGACATGAAAGTGTC i panPan2.chr3 C 0 I 68 s gorGor5.CYUI01015020v1 86830 137 + 12760026 CAGAAATGCACA-TGCATATTAGATATGGGATTTGAGTCGTAGTA-ATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA------CCCCACTGAA----TATGCAGAGTTTAAGATGCAATGGCCAGAAGACATGAACGTGTC i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20258699 138 + 20583478 CAGAAATGCACAATGCATATTAGATATGGGA-TTGAGTCATAGTATATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA------CCCCACTCAA----TATGCAGAGTTTAAGATGCAATGGCCAGAAGACATGAACGTGTC i ponAbe2.chr3_random M 200 C 0 s nomLeu3.chrUn_GL398098_1 5313 139 - 27701 CAGAAATGCACAATGCATATTAGATATGGGATTTGAGTCATAGTGTATTTCTCTAAGAATGTCATTTATTGTACT-TTCACATCCA------CCCCACTGAA----TATGCAGAGTTTAAGATGCAATGGCCAGAAGACATGAGCGTGTC i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363048 138 - 204787373 CGGAAATGCACAATGCATATTAGATACGGGATTTGAGCTGTAATGTATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA-------CCCGCTCAA----TACGCAGAGTTGAAGATGCAATGGCCAGAAGACATGAAAGTGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 264862 138 - 192460366 CGGAAATGCACAATGCATATTAGATACGGGATTTGAGCTGTAATGTATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA-------CCCGCTCAA----TACGCAGAGTTGAAGATGCAATGGCCAGAAGACATGAAAGTGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283305 138 - 11645122 CGGAAATGCACAATGCATATTAGATACGGGATTTGAGCTGTAATGTATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA-------CCCGCTCAA----TACGCAGAGTTGAAGATGCAATGGCCAGAAGACATGAAAGTGTC i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 264679 138 - 6739814 CGGAAATGCACAATGCATATTAGATACGGGATTTGAGCTGTAATGTATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA-------CCCGCTCAA----TATGCAGAGTTGAAGATGCAATGGCCAGAAGACATGAAAGTGTC i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155370 138 - 101219884 CGGAAATGCACAATGCATATTAGATACGAGATTTGAGCTGTAATATATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA-------CCCGCTCAA----TATGCAGAGTTGAAGATGCAATGGCCAGAAGACATGAAAGTGTC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275285 138 - 785044 CGGAAATGCACAATGCATATTAGATACGGGATTTGAGCTGTAATGTATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA-------CCCGCTCAA----TATGCAGAGTTGAAGATGCAATGGCCAGAAGACATGAAAGTGTC i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 174656 138 - 10971483 CGGAAATGCACAATGCATATTAGATACGGGATTTGAGCTGTAATATATTTCTCTAAGAATGTAATTTGTTGTACT-TTCACATCCA-------CCCGCTCAA----TATGCAGAGTTGAAGATGCAATGGCCAGAAGACATGACAGTGTC i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32800525 139 - 50472720 TATAAATGCACAATGCATATTTGATATGGGATTTGAGTAGTAACATATTTCTCTAAGAATGTAATTTATTGTACT-TTAACATCTA------CTCCACTAAA----TATGCAGACTTTAACATGCAATGGTCAGAAGACAAGAAAGTATC i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7752892 139 + 14377064 TGTAAATGCACAATGCATATTGGATATGGGATTTGAGTAGTAATATATTTCTCTAAGAATGTAATTTATTGTACT-TTCACATCCA------CTCCACTAAA----TATGCAGACTTTAAGATGCAATGGCCAGAAGACAAGATAGTGTC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4214223 139 - 9889416 TGTAAATGCACAATGCATATTGGATATGGGATTTGAGTAGTAATATATTTCTCTAACAATGTAATTTATTGTACT-TTCACATCCA------CTCCACTAAA----TATGCAGACTTTAAGATGCAATGGCCAGAAGACAAGAAAGTGTC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20837427 149 + 38779656 TGCATATGCATAACGCATACTAGATATGGGATTTGAATAGTAATATACCTCTTTACTAATGTAATTTATTTTACT-CTCATATCTGCCCCCCCCCCGCCCCACCGCTCTGCAGAGTTTAAAATGCAATGGCCAAAAGACAAGGAAGTGTC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28873416 137 - 39895921 TAAAAATACACATTGTATATTAGATAGGGGATTTGAATGGTATTACATTT---TAAGGTTGTAATTTACTATACTCTTTATGCCTA------CCCCACTAAT----TATGCAGAGTTTAAAATGCAATGACCAGAAGACAAGGAAGTGTT i canFam3.chr31 C 0 C 0 e saiBol1.JH378168 11011366 1195 - 13128814 M a score=2712184.000000 s hg38.chr22_KI270732v1_random 35697 264 + 41543 ACTAGAAGGATGTGGACGTGGGCTCCGGGACTGTTGATGATGACTGTGATCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGTTGGATGCAAATTTCACTTTATGATGAAATTATG-TGAGTCTTTGGTTTGACGTTTAAGCAATTTGTTGTAATCTTCCGCC-AGG-TTTTTGTTACAGGGTATTGTAATGCCTCTGCACCAGTTAAATTGAAATAGAGTTAGGTGTGAGT s panTro5.chr20 36383296 264 - 66533130 ACTAGAAGGATGTGGACGTGGGCTCTGGGACTGTTGATGATGACTGTGGTCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGACAAGTGCAAGGATGTTCTAATTCTTTGAGAGTTGGATGGAAATTTCACTTTATGATGAAATTATG-TGAGTCTTTGGTTTGACGTTTAAGCAATTTGTTGTAATCTTCTGCC-AGG-TTTTTGTTACAGGGTATTGTAATGCCTCTGCACCAGTTAAATTGAAATAGAATTAGGTGTGAGT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 86967 264 + 12760026 ACTAGAAGGATGTGGACATGGGCTCCGGGACTGTTGATGATGACTGTGGTCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGTTGGATGCGAATTTCACTTTATGATGAAATTATG-TGAGTCTTTGGTTTGACGTTTAAGCAATTTGTTGTAATCTTCTGCC-AGG-TTTTTGTTACAGGGTATTGTAATGCCTCTGCACCAGTTAAATTGGAATAGAATTAGGTGTGAGT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20258837 264 + 20583478 ACTAGAAGGATGTGGACGTGGGCTCCGGGACTGTTGATGATGACTGTGGTCTTCTGGGGTCATCGGGGCAGTGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGCTGGATGCGAATTTCACTTTATGATGATATTATG-TAAGTCTTTGGTTTGACGTTTAAGCAATTTGTTGTAATCTTCCCCC-AGG-TTTTTGTTACAGAGTATTGTAATGCCTCTGCACCAGTTAAATTGAAATAGAATTAGGTGTGAGT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 5452 265 - 27701 ACTAGAAGGATGTGGACGTGGGCTCCGGGGCTGTTGATGATGACGGTGGTCTTTTGGGGTCATCTGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATTTTCTAATTCTTTGCGAGTTGGATGCGAATTTCGCTTTGTGATGAAATTATGTTGAGTCTTTGGTTTGATGTTTAAGCAATTTGTTACAATCTTCCGTC-AGG-TTTTTGTTACAGGGTATTGTAATATCTCTGCACCAGTTAAATTGAAATAGAATTAGGTGTGAGT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363186 264 - 204787373 ACGAGAAGGATGTGGACATGGGCTCCGGGGCTGTTGATGGCGACTGTGGTCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGCTGGATGCGAATTTCACTGTATGATGAAATTATG-TGAATCTTTGGTTTGACGTTTAAGCAATTTGCTGTAATCTTCCCGC-AGG-TGTTTGTTACAAGGTATTGTAATGCCTCTGCACCAGTTAAACTGAACTAGAATTAGGTGTGAGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265000 264 - 192460366 ACGAGAAGGATGTGGACATGGGCTCCGGGGCTGTTGATGGCGACTGTGGTCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGCTGGATGCGAATTTCACTGTATGATGAAATTATG-TGAATCTTTGGTTTGACGTTTAAGCAATTTGCTGTAATCTTCCCGC-AGG-TGTTTGTTACAAGGTATTGTAATGCCTCTGCACCAGTTAAACTGAACTAGAATTAGGTGTGAGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283443 264 - 11645122 ACGAGAAGGATGTGGACATGGGCTCCGGGGCTGTTGATGGCGACTGTGGTCTTTTGGGGTCATCAAGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGCTGGATGCGAATTTCACTGTATGATGAAATTATG-TGAATCTTTGGTTTGACGTTTAAGCAATTTGCTGTAATCTTCCCGC-AGG-TGTTTGTTACAAGGTATTGTAATGCCTCTGCACCAGTTAAACTGAACTAGAATTAGGTGTGAGT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 264817 264 - 6739814 ACGAGAAGGATGTGGACATGGGCTCCGGGGCTGTTGATGGTGACTGTGGTCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGCTGGATGCGAATTTCACTGTATGATGAAATTATG-TGAATCTTTGGTTTGACGTTTAAGCAATTTGCTGTAATCTTCCCGC-AGG-TTTTTGTTACAAGGTATTGTAATGCCTCTGCACCAGTTAAACCGAACTAGAATTAGGTGTGAGT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155508 264 - 101219884 ACGAGAAGGATGTGGACATGGGCTCCGGGGCTGTTGATGGCAACTGTGGTCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGTTGGATGCGAATTTCACTGTATGATGAAATTATG-TGAATCTTTGGTTTGAGGTTTAAGCAATTTGCTGTAATCTTCCCGC-AGG-TTTTTGTTACAAGGTATTGTAATGCCTCTGCACCAGCTAAACTGAACTAGAATTAGGTGTGAGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275423 264 - 785044 ACGAGAAGGATGTGGACATGGGCTCCGGGGCTGTTGATGGCGACTGTGGTCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATTCTTTGAGAGCTGGATGCGAATTTCACTGTATGATGAAATTATG-TGAATCTTTGGTTTGACGTTTAAGCAATTTGCTGTAATCTTCCCGC-AGG-TTTTTGTTACAAGGTATTGTAATGCCTCTGCACCAGTTAAACCGAACTAGAATTAGGTGTGAGT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 174794 263 - 10971483 ACGAGAAGGATGTGGACGTGGGCTCCGGGGCTGTTGATGGCGACTGTGGTCTTTTGGGGTCATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTATAATTCTTTGAGAGTTGGATGTGAATTT-ACTTTATGATGAAATTATG-TGAGTCTTTGGTTTGACGTTTAAGCAATTCGCTATAATCTTCCCGC-AGG-TTTTTGTAACAAGGCATTGTAATGCCTCTGCACCAGTTAAACTGAACTAGAATTAGGTGTGAGT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32800664 264 - 50472720 ATGAGAAGGATGTGGCCATTGACTCCGGGACTGCTGATGATGATTGTGGTGTTCTGGGGTGATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATCCTTTGAGAGTTGGATGTGAATTTCACTTTATAATGAAATTATG-TGAGTCTTTGATCCGACGTTTAAACAATTTGTTGTAATCTTTTCCT-GGG-TTTTTGTTACTGGGCATTGTAATGCCTCTGAACCAGTTAAATTGAACTAGAATTAAGTGTGAGT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7753031 264 + 14377064 ACGGGAAGGATGTGGACATGGACTCCGGGACTACTGATGATGATTGTGGTCTTCTGGGTTGATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATCCTTTGAGAGTTGGATGTGAATTTCACTTTATGATGAAATTACG-TGAGTCTTTGATTTGACGTTTAAACAATTTGTTGTAATCTTTTCCT-GGG-TTTTTGTTACTGGGCATTGTAATGCCTCTGTACCAGTTAAATTGAACTAGAATTAGATGTGAGT i cebCap1.NW_016107322v1 C 0 I 81 s aotNan1.NW_018487195v1 4214362 264 - 9889416 ACGAGAAGGATGTGGACATGGACTCCAGGACTGCTGATGATGATTGTGGTCTTCTGGGGTGATCAGGGGAATGGACAAGGCCAAGGTAAGTGCAAGGATGTTCTAATCCTTTGAGAGTTGGATGTGAATTTCACTTTATGATGAAATTATG-TGAGTCTTTGATTTGACGTTTAAACAATTTGTTGTAATCTTTTCCT-GGG-TTTTTGTTACTGGGCATTGTAATGCCTCTGCACCAGTTAAATTGAACTAGAATTAGGTGTGAGT i aotNan1.NW_018487195v1 C 0 I 92 s otoGar3.GL873528 20837576 263 + 38779656 ACTAGAAGTATGTGGACGTGGGTTCCGGGACTGCTAATGATGATTGTGATCTTTTGGGGTCAACAGGGAAACGGACAAGGCCAAGGTAAGTGGGAGCACGTTCTGATCCTCTGAGAACCAGCTGTGAGTTTCCTCTAGTGGTGGAATTGTG-TAGGTCTTTGGTTTGGTATTGAGGTGATGTGTTACCATATTTCCCC-AAGTTTTTTGTTAAAGTGTTTTGTAGGGCCTCTG-ATCGGTT-CATTGAAATAGAATTAGGTGCAAGG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28873553 259 - 39895921 ACTAGAAGAATGTGGACATGGACTCCGGAACTGCTAATGGTGACTGTGATCCTCTGGGGTCAGCAAGGAAATGGACAAGGCCAAGGTAGGTGCAAGCATGTTTTAATATTTTGAGAGGTGGATATGAGTTTCACTTTACTTTGAAGTTATA-TGGATCTTTAGTTTGATGTTTTAG---GCCGTTTCAGTCTTTCTCCAAGG-GTTTTGTTGAAGTGTATTATA---CTTTCGAATTAGTTAAGGTGAGCTAGAACTAGATGTGAAT i canFam3.chr31 C 0 C 0 e saiBol1.JH378168 11011366 1195 - 13128814 M e panPan2.chr3 77927095 68 + 205426864 I a score=264666.000000 s hg38.chr22_KI270732v1_random 35961 42 + 41543 AAATGCATCAAAATTGAGGCCATCTTTCCGAAATTGGCTTTT s panTro5.chr20 36383560 42 - 66533130 AAATGCATCAAAATTGAAGGCATCTTTCTGAAATTGGCTTTT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 87231 42 + 12760026 AAATGCATCAAAATTGAAGCCATCTTTCTGAAATTGGCTTTT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259101 42 + 20583478 AAATGCATCAAAATTGAAGCCATCTTTCTGAAACTGGCTTTT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 5717 42 - 27701 AAATGCATCAAAATTGAAGCCATCTTTCTGAAATTGGCTTTT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363450 42 - 204787373 AAATGCATCCAATTTGAAGCCACCGTTCTGAAACTGGCTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265264 42 - 192460366 AAATGCATCCAATTTGAAGCCACCGTTCTGAAACTGGCTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283707 42 - 11645122 AAATGCATCCAATTTGAAGCCACCGTTCTGAAACTGGCTTTT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 265081 42 - 6739814 AAATGCATCCAATTTGAAGCCACCATTCTGAAACTGGCTTTT i cerAty1.NW_012001605v1 C 0 I 48 s chlSab2.chr22 155772 42 - 101219884 AAAGGCATCCAATTTGAAGCCACCGTTCTGAAACTGGCTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275687 42 - 785044 AAATGCATCCAATTTGAAGCCACCATTCTGAAACTGGCTTTT i manLeu1.NW_012099043v1 C 0 I 48 s colAng1.NW_012123820v1 175057 42 - 10971483 AAATGCATCCAGTTTGAAGCCACCGTTCTGAAACTGGCTTTT i colAng1.NW_012123820v1 C 0 I 2 s calJac3.chr21 32800928 20 - 50472720 CAGTGTATC----------------------AATTGGCTTTT i calJac3.chr21 C 0 C 0 s otoGar3.GL873528 20837839 37 + 38779656 CAGTGTATCAGATTTGAAA-----TTTCCAACATTGGCTTTA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28873812 42 - 39895921 TGATGTATCAAATTTGAAGTCACTGCTCCAAAATTGGCTTTA i canFam3.chr31 C 0 C 0 e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e panPan2.chr3 77927095 68 + 205426864 I a score=39848.000000 s hg38.chr22_KI270732v1_random 36003 8 + 41543 TTCTGTTG s panTro5.chr20 36383602 8 - 66533130 CTCTGTTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 87273 8 + 12760026 CTCTGTTG i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259143 8 + 20583478 CTCTGTTG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 5759 8 - 27701 CTCTGTTG i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363492 8 - 204787373 CTCGGTTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265306 8 - 192460366 CTCGGTTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283749 8 - 11645122 CTCGGTTG i macNem1.NW_012010856v1 C 0 I 48 s chlSab2.chr22 155814 8 - 101219884 CTCGGTTG i chlSab2.chr22 C 0 C 0 s calJac3.chr21 32800948 8 - 50472720 CTCTGTTG i calJac3.chr21 C 0 C 0 s otoGar3.GL873528 20837876 8 + 38779656 TTTTGTTG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28873854 8 - 39895921 CTCTGTTG i canFam3.chr31 C 0 C 0 e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e panPan2.chr3 77927095 68 + 205426864 I a score=8030.000000 s hg38.chr22_KI270732v1_random 36011 5 + 41543 GAATT s panTro5.chr20 36383610 5 - 66533130 GAATT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 87281 5 + 12760026 GAATT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259151 5 + 20583478 GAATT i ponAbe2.chr3_random C 0 I 36 s nomLeu3.chrUn_GL398098_1 5767 5 - 27701 TAATT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363500 5 - 204787373 TAATT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265314 5 - 192460366 TAATT i macFas5.chr2 C 0 C 0 s chlSab2.chr22 155822 5 - 101219884 TAATT i chlSab2.chr22 C 0 C 0 s calJac3.chr21 32800956 5 - 50472720 TAATT i calJac3.chr21 C 0 C 0 s otoGar3.GL873528 20837884 5 + 38779656 TAGTA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28873862 3 - 39895921 CAG-- i canFam3.chr31 C 0 C 0 e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e panPan2.chr3 77927095 68 + 205426864 I a score=26679.000000 s hg38.chr22_KI270732v1_random 36016 12 + 41543 CATTATATATAT s panTro5.chr20 36383615 12 - 66533130 GATtatatatat i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 87286 12 + 12760026 GATtatatatat i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 5772 12 - 27701 GGTGATATGTAT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363505 12 - 204787373 GATGCTATATAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265319 12 - 192460366 GATGCTATATAT i macFas5.chr2 C 0 C 0 s chlSab2.chr22 155827 12 - 101219884 GATGCTATATAT i chlSab2.chr22 C 0 C 0 s calJac3.chr21 32800961 12 - 50472720 GATGCTATATAT i calJac3.chr21 C 0 I 18 s otoGar3.GL873528 20837889 12 + 38779656 GATGCTATATCT i otoGar3.GL873528 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e canFam3.chr31 28873865 0 - 39895921 C e panPan2.chr3 77927095 68 + 205426864 I a score=5096.000000 s hg38.chr22_KI270732v1_random 36028 2 + 41543 AT s panTro5.chr20 36383627 2 - 66533130 at i panTro5.chr20 C 0 I 42 s gorGor5.CYUI01015020v1 87298 2 + 12760026 at i gorGor5.CYUI01015020v1 C 0 I 14 s nomLeu3.chrUn_GL398098_1 5784 2 - 27701 AT i nomLeu3.chrUn_GL398098_1 C 0 I 6 s rheMac8.chr2 204363517 2 - 204787373 AT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265331 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s chlSab2.chr22 155839 2 - 101219884 At i chlSab2.chr22 C 0 C 0 s otoGar3.GL873528 20837901 2 + 38779656 AT i otoGar3.GL873528 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 32800973 18 - 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e canFam3.chr31 28873865 0 - 39895921 C e panPan2.chr3 77927095 68 + 205426864 I a score=1500.000000 s hg38.chr22_KI270732v1_random 36030 1 + 41543 G s nomLeu3.chrUn_GL398098_1 5792 1 - 27701 G i nomLeu3.chrUn_GL398098_1 I 6 C 0 s rheMac8.chr2 204363519 1 - 204787373 G i rheMac8.chr2 C 0 I 28 s macFas5.chr2 265333 1 - 192460366 G i macFas5.chr2 C 0 I 6 s chlSab2.chr22 155841 1 - 101219884 g i chlSab2.chr22 C 0 I 28 s otoGar3.GL873528 20837903 1 + 38779656 G i otoGar3.GL873528 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 32800973 18 - 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e canFam3.chr31 28873865 0 - 39895921 C e panTro5.chr20 36383629 42 - 66533130 I e gorGor5.CYUI01015020v1 87300 14 + 12760026 I e panPan2.chr3 77927095 68 + 205426864 I a score=-210.000000 s hg38.chr22_KI270732v1_random 36031 3 + 41543 GAA s nomLeu3.chrUn_GL398098_1 5793 3 - 27701 AGG i nomLeu3.chrUn_GL398098_1 C 0 C 0 s macFas5.chr2 265340 3 - 192460366 ATA i macFas5.chr2 I 6 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 32800973 18 - 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e chlSab2.chr22 155842 28 - 101219884 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e rheMac8.chr2 204363520 28 - 204787373 I e canFam3.chr31 28873865 0 - 39895921 C e panTro5.chr20 36383629 42 - 66533130 I e gorGor5.CYUI01015020v1 87300 14 + 12760026 I e panPan2.chr3 77927095 68 + 205426864 I a score=992.000000 s hg38.chr22_KI270732v1_random 36034 62 + 41543 TTCTGTTGGAATTCatatatatata---------------------tatatgcatatatatat---gtat---------atatatatgaatatat s nomLeu3.chrUn_GL398098_1 5796 93 - 27701 TATTAT--GAGGCCATATATATGCGTATGTCTCTGTTGTAATTGGTTATATGCATATATATGTGAGGTATTACGAGGCCATATATATGCGTATGT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s canFam3.chr31 28873865 56 - 39895921 ------TAGATGCTAGACACAGATA---------------------TGTTTGTATGTACCTGT---GTAA---------TTTTATAAGAACATAT i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 32800973 18 - 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e chlSab2.chr22 155842 28 - 101219884 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e rheMac8.chr2 204363520 28 - 204787373 I e macFas5.chr2 265343 0 - 192460366 C e panTro5.chr20 36383629 42 - 66533130 I e gorGor5.CYUI01015020v1 87300 14 + 12760026 I e panPan2.chr3 77927095 68 + 205426864 I a score=1504.000000 s hg38.chr22_KI270732v1_random 36096 64 + 41543 -----------------atatgtatatatatatgaa------------tatatatatgtatatatatatg----aat--at-atatgtatatatatatga- s nomLeu3.chrUn_GL398098_1 5889 101 - 27701 CTCTGTTGCAATTGGTGATATGTATATATATGTGAGGTATTATGAGGCTATATATATGCGTGTGTCTCTGTTGTAATTGATGATATGTATATATATGTGAG i nomLeu3.chrUn_GL398098_1 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 32800973 18 - 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e chlSab2.chr22 155842 28 - 101219884 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e rheMac8.chr2 204363520 28 - 204787373 I e macFas5.chr2 265343 0 - 192460366 C e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 36383629 42 - 66533130 I e gorGor5.CYUI01015020v1 87300 14 + 12760026 I e panPan2.chr3 77927095 68 + 205426864 I a score=1242.000000 s hg38.chr22_KI270732v1_random 36160 13 + 41543 atat---------atatatatg s nomLeu3.chrUn_GL398098_1 5990 22 - 27701 GTATTACGAGGCCATATATATG i nomLeu3.chrUn_GL398098_1 C 0 I 467 s macFas5.chr2 192194999 13 + 192460366 acac---------aTATATATA i macFas5.chr2 n 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 32800973 18 - 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e chlSab2.chr22 155842 28 - 101219884 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e rheMac8.chr2 204363520 28 - 204787373 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 36383629 42 - 66533130 I e gorGor5.CYUI01015020v1 87300 14 + 12760026 I e panPan2.chr3 77927095 68 + 205426864 I a score=555.000000 s hg38.chr22_KI270732v1_random 36173 24 + 41543 -------aatatat-atacaccagatatgtat s macFas5.chr2 192195012 29 + 192460366 GCCTCATAATATATCACACAC---ATATATAT i macFas5.chr2 C 0 I 3 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 32800973 18 - 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 11011366 1195 - 13128814 M e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 175099 2 - 10971483 I e manLeu1.NW_012099043v1 275729 48 - 785044 I e chlSab2.chr22 155842 28 - 101219884 I e cerAty1.NW_012001605v1 265123 48 - 6739814 I e macNem1.NW_012010856v1 283757 48 - 11645122 I e rheMac8.chr2 204363520 28 - 204787373 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 36383629 42 - 66533130 I e nomLeu3.chrUn_GL398098_1 6012 467 - 27701 I e gorGor5.CYUI01015020v1 87300 14 + 12760026 I e panPan2.chr3 77927095 68 + 205426864 I a score=129063.000000 s hg38.chr22_KI270732v1_random 36197 36 + 41543 atC-ACTATTACAGAGAAACAGTTGTCATGCTGCATT s panTro5.chr20 30148316 36 + 66533130 ATC-ACTGTTACAGAGAAAGAGTTGTCATGCTGCATT i panTro5.chr20 n 42 n 42 s gorGor5.CYUI01015020v1 12671400 36 - 12760026 ATC-ACTATTACAGAGAAACAGTTGTCATGCTGCATT i gorGor5.CYUI01015020v1 n 14 I 1326 s rheMac8.chr2 422686 35 + 204787373 ATC-ACTATTACAGAG-AACAGTTGTCATGCTGCATT i rheMac8.chr2 n 28 C 0 s macFas5.chr2 192195044 26 + 192460366 ATCAATTACAACCGAG-AAAAGC----------CAGT i macFas5.chr2 I 3 C 0 s macNem1.NW_012010856v1 11360178 35 + 11645122 ATC-ACTATTACAGAG-AACAGTTGTCATGCTGCATT i macNem1.NW_012010856v1 n 48 C 0 s cerAty1.NW_012001605v1 6473504 35 + 6739814 ATC-ACTATTACAAAG-AACAGTTGTCATGCTGCATT i cerAty1.NW_012001605v1 n 48 C 0 s manLeu1.NW_012099043v1 508130 35 + 785044 ATC-ACTATTACAGAG-AACAGTTGTCATGCTGCATT i manLeu1.NW_012099043v1 n 48 C 0 s colAng1.NW_012123820v1 10795278 35 + 10971483 ATC-ACTATTACAGAG-AACAGTTGTCATGCTGCATT i colAng1.NW_012123820v1 n 2 C 0 s calJac3.chr21 17670653 36 + 50472720 ATC-ACTATTACAGAGAAACAGTTTTTATGCTGCATT i calJac3.chr21 n 18 C 0 s saiBol1.JH378168 2115640 36 + 13128814 ATC-ACTATTACAGAGAAACAGTTGTCATGCTGCATT i saiBol1.JH378168 n 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e otoGar3.GL873528 20837904 0 + 38779656 C e chlSab2.chr22 155842 28 - 101219884 I e canFam3.chr31 28873921 0 - 39895921 C e nomLeu3.chrUn_GL398098_1 6012 467 - 27701 I e panPan2.chr3 77927095 68 + 205426864 I a score=3501.000000 s hg38.chr22_KI270732v1_random 36233 2 + 41543 TT s gorGor5.CYUI01015020v1 12672762 2 - 12760026 TT i gorGor5.CYUI01015020v1 I 1326 C 0 s rheMac8.chr2 422721 2 + 204787373 TT i rheMac8.chr2 C 0 I 1178 s macFas5.chr2 192195070 1 + 192460366 T- i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 11360213 2 + 11645122 TT i macNem1.NW_012010856v1 C 0 I 1178 s cerAty1.NW_012001605v1 6473539 2 + 6739814 TT i cerAty1.NW_012001605v1 C 0 I 1170 s manLeu1.NW_012099043v1 508165 2 + 785044 TT i manLeu1.NW_012099043v1 C 0 I 1168 s colAng1.NW_012123820v1 10795313 2 + 10971483 TT i colAng1.NW_012123820v1 C 0 I 1089 s calJac3.chr21 17670689 2 + 50472720 TT i calJac3.chr21 C 0 I 1090 s saiBol1.JH378168 2115676 2 + 13128814 TT i saiBol1.JH378168 C 0 n 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e otoGar3.GL873528 20837904 0 + 38779656 C e chlSab2.chr22 155842 28 - 101219884 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e nomLeu3.chrUn_GL398098_1 6012 467 - 27701 I e panPan2.chr3 77927095 68 + 205426864 I a score=1640.000000 s hg38.chr22_KI270732v1_random 36235 9 + 41543 TCGGAAAGA s gorGor5.CYUI01015020v1 12672764 9 - 12760026 TCAGAAAGA i gorGor5.CYUI01015020v1 C 0 C 0 s macFas5.chr2 192195071 9 + 192460366 TCAGAACGG i macFas5.chr2 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 17670691 1090 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10795315 1089 + 10971483 I e manLeu1.NW_012099043v1 508167 1168 + 785044 I e chlSab2.chr22 155842 28 - 101219884 I e cerAty1.NW_012001605v1 6473541 1170 + 6739814 I e macNem1.NW_012010856v1 11360215 1178 + 11645122 I e rheMac8.chr2 422723 1178 + 204787373 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e nomLeu3.chrUn_GL398098_1 6012 467 - 27701 I e panPan2.chr3 77927095 68 + 205426864 I a score=33360.000000 s hg38.chr22_KI270732v1_random 36244 11 + 41543 TGGCTTCAATT s gorGor5.CYUI01015020v1 12672773 11 - 12760026 TGGCTTCAATT i gorGor5.CYUI01015020v1 C 0 C 0 s rheMac8.chr2 423901 11 + 204787373 TGGCTTCAAAT i rheMac8.chr2 I 1178 C 0 s macFas5.chr2 192195080 11 + 192460366 TGGCTTCAAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 11361393 11 + 11645122 TGGCTTCAAAT i macNem1.NW_012010856v1 I 1178 C 0 s cerAty1.NW_012001605v1 6474711 11 + 6739814 TGGCTTCAAAT i cerAty1.NW_012001605v1 I 1170 C 0 s chlSab2.chr22 101064090 11 + 101219884 TGGCTTCAAAT i chlSab2.chr22 n 28 C 0 s manLeu1.NW_012099043v1 509335 11 + 785044 TGGCTTCAAAT i manLeu1.NW_012099043v1 I 1168 C 0 s colAng1.NW_012123820v1 10796404 11 + 10971483 TGGCTTCAAAC i colAng1.NW_012123820v1 I 1089 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 17670691 1090 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e nomLeu3.chrUn_GL398098_1 6012 467 - 27701 I e panPan2.chr3 77927095 68 + 205426864 I a score=346646.000000 s hg38.chr22_KI270732v1_random 36255 95 + 41543 TTGATGCATTTACTCACACCTAACTCTATTTCAATTTAACTGGTGTAGAGGCATTACAATACCCTGTAACAAAAACCTGGCGGAAGATTACAACA s gorGor5.CYUI01015020v1 12672784 95 - 12760026 TTGATGCATTTACTCACACCTAATTCTATTCCAATTTAACTGGTGCAGAGGCATTACAATACCCTGTAACAAAAACCTGGCAGAAGATTACAACA i gorGor5.CYUI01015020v1 C 0 C 0 s rheMac8.chr2 423912 95 + 204787373 TGGATGCATTTACTCACACCTAATTCTAGTTCAGTTTAACTGGTGCAGAGGCATTACAATACCTTGTAACAAACACCTGCGGGAAGATTACAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192195091 95 + 192460366 TGGATGCATTTACTCACACCTAATTCTAGTTCAGTTTAACTGGTGCAGAGGCATTACAATACCTTGTAACAAACACCTGCGGGAAGATTACAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 11361404 95 + 11645122 TGGATGCATTTACTCACACCTAATTCTAGTTCAGTTTAACTGGTGCAGAGGCATTACAATACCTTGTAACAAACACCTGCGGGAAGATTACAGCA i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 6474722 95 + 6739814 TGGATGCATTTACTCACACCTAATTCTAGTTCGGTTTAACTGGTGCAGAGGCATTACAATACCTTGTAACAAAAACCTGCGGGAAGATTACAGCA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 101064101 95 + 101219884 TGGATGCCTTTACTCACACCTAATTCTAGTTCAGTTTAGCTGGTGCAGAGGCATTACAATACCTTGTAACAAAAACCTGCGGGAAGATTACAGCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 509346 95 + 785044 TGGATGCATTTACTCACACCTAATTCTAGTTCGGTTTAACTGGTGCAGAGGCATTACAATACCTTGTAACAAAAACCTGCGGGAAGATTACAGCA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 10796415 95 + 10971483 TGGATGCATTTACTCACACCTAATTCTAGTTCAGTTTAACTGGTGCAGAGGCATTACAATGCCTTGTTACAAAAACCTGCGGGAAGATTATAGCG i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 17671781 95 + 50472720 TTGATACACTGACTCACACTTAATTCTAGTTCAATTTAACTGGTTCAGAGGCATTACAATGCCCAGTAACAAAAACCCAGGAAAAGATTACAACA i calJac3.chr21 I 1090 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e nomLeu3.chrUn_GL398098_1 6012 467 - 27701 I e panPan2.chr3 77927095 68 + 205426864 I a score=48437.000000 s hg38.chr22_KI270732v1_random 36350 11 + 41543 AATTGCTTAAA s gorGor5.CYUI01015020v1 12672879 11 - 12760026 AATTGCTTAAA i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 6479 11 - 27701 AATTGGTGATA i nomLeu3.chrUn_GL398098_1 I 467 C 0 s rheMac8.chr2 424007 11 + 204787373 AATTGCTTAAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192195186 11 + 192460366 AATTGCTTAAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 11361499 11 + 11645122 AATTGCTTAAA i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 6474817 11 + 6739814 AATTGCTTAAA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 101064196 11 + 101219884 AATTGCTTAAA i chlSab2.chr22 C 0 n 0 s manLeu1.NW_012099043v1 509441 11 + 785044 AATTGCTTAAA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 10796510 11 + 10971483 AATTGCTTAAA i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 17671876 11 + 50472720 AATTGTTTAAA i calJac3.chr21 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e panPan2.chr3 77927095 68 + 205426864 I a score=13564.000000 s hg38.chr22_KI270732v1_random 36361 4 + 41543 TGTC s gorGor5.CYUI01015020v1 12672890 4 - 12760026 CGTC i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 6490 4 - 27701 TGTA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 424018 4 + 204787373 CGTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 192195197 4 + 192460366 CGTC i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 11361510 4 + 11645122 CGTC i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 6474828 4 + 6739814 CGTC i cerAty1.NW_012001605v1 C 0 C 0 s manLeu1.NW_012099043v1 509452 4 + 785044 CGTC i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 10796521 4 + 10971483 CGTC i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 17671887 4 + 50472720 CGTC i calJac3.chr21 C 0 n 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e chlSab2.chr22 101064207 0 + 101219884 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e panPan2.chr3 77927095 68 + 205426864 I a score=5096.000000 s hg38.chr22_KI270732v1_random 36365 2 + 41543 AA s gorGor5.CYUI01015020v1 12672894 2 - 12760026 AA i gorGor5.CYUI01015020v1 C 0 n 0 s rheMac8.chr2 424022 2 + 204787373 AA i rheMac8.chr2 C 0 n 0 s macFas5.chr2 192195201 2 + 192460366 AA i macFas5.chr2 C 0 n 0 s macNem1.NW_012010856v1 11361514 2 + 11645122 AA i macNem1.NW_012010856v1 C 0 n 0 s cerAty1.NW_012001605v1 6474832 2 + 6739814 AA i cerAty1.NW_012001605v1 C 0 n 0 s manLeu1.NW_012099043v1 509456 2 + 785044 AA i manLeu1.NW_012099043v1 C 0 n 0 s colAng1.NW_012123820v1 10796525 2 + 10971483 AA i colAng1.NW_012123820v1 C 0 n 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e chlSab2.chr22 101064207 0 + 101219884 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e nomLeu3.chrUn_GL398098_1 6494 0 - 27701 C e panPan2.chr3 77927095 68 + 205426864 I a score=543.000000 s hg38.chr22_KI270732v1_random 36367 11 + 41543 TATATATATAT s nomLeu3.chrUn_GL398098_1 6494 11 - 27701 TATATATGTGA i nomLeu3.chrUn_GL398098_1 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e manLeu1.NW_012099043v1 509458 0 + 785044 I e chlSab2.chr22 101064207 0 + 101219884 I e cerAty1.NW_012001605v1 6474834 0 + 6739814 I e macNem1.NW_012010856v1 11361516 0 + 11645122 I e rheMac8.chr2 424024 0 + 204787373 I e macFas5.chr2 192195203 0 + 192460366 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e gorGor5.CYUI01015020v1 12672896 0 - 12760026 I e panPan2.chr3 77927095 68 + 205426864 I a score=600.000000 s hg38.chr22_KI270732v1_random 36378 2 + 41543 GG s gorGor5.CYUI01015020v1 87314 2 + 12760026 GG i gorGor5.CYUI01015020v1 I 14 C 0 s nomLeu3.chrUn_GL398098_1 6505 2 - 27701 GG i nomLeu3.chrUn_GL398098_1 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e manLeu1.NW_012099043v1 509458 0 + 785044 I e chlSab2.chr22 101064207 0 + 101219884 I e cerAty1.NW_012001605v1 6474834 0 + 6739814 I e macNem1.NW_012010856v1 11361516 0 + 11645122 I e rheMac8.chr2 424024 0 + 204787373 I e macFas5.chr2 192195203 0 + 192460366 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e panPan2.chr3 77927095 68 + 205426864 I a score=4129.000000 s hg38.chr22_KI270732v1_random 36380 14 + 41543 TATTATGAGGCTAC s gorGor5.CYUI01015020v1 87316 12 + 12760026 TATTATGAGGCt-- i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 6507 13 - 27701 TATTACGAGGCCA- i nomLeu3.chrUn_GL398098_1 C 0 C 0 s macFas5.chr2 265343 13 - 192460366 TATTATGAGGCTA- i macFas5.chr2 C 0 C 0 e ponAbe2.chr3_random 20259156 36 + 20583478 I e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e manLeu1.NW_012099043v1 509458 0 + 785044 I e chlSab2.chr22 101064207 0 + 101219884 I e cerAty1.NW_012001605v1 6474834 0 + 6739814 I e macNem1.NW_012010856v1 11361516 0 + 11645122 I e rheMac8.chr2 424024 0 + 204787373 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e panPan2.chr3 77927095 68 + 205426864 I a score=3738.000000 s hg38.chr22_KI270732v1_random 36394 13 + 41543 gtgtgtgtgtgtg s gorGor5.CYUI01015020v1 87328 13 + 12760026 gtgtgtgtgtgtg i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259192 13 + 20583478 gtgtgtgtgtgtg i ponAbe2.chr3_random I 36 C 0 e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e manLeu1.NW_012099043v1 509458 0 + 785044 I e chlSab2.chr22 101064207 0 + 101219884 I e cerAty1.NW_012001605v1 6474834 0 + 6739814 I e macNem1.NW_012010856v1 11361516 0 + 11645122 I e rheMac8.chr2 424024 0 + 204787373 I e macFas5.chr2 265356 0 - 192460366 C e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I e nomLeu3.chrUn_GL398098_1 6520 0 - 27701 C e panPan2.chr3 77927095 68 + 205426864 I a score=1386.000000 s hg38.chr22_KI270732v1_random 36407 2 + 41543 tg s panPan2.chr3 77927163 2 + 205426864 tg i panPan2.chr3 I 68 C 0 s gorGor5.CYUI01015020v1 87341 2 + 12760026 tg i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259205 2 + 20583478 tg i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6520 2 - 27701 TA i nomLeu3.chrUn_GL398098_1 C 0 C 0 e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e manLeu1.NW_012099043v1 509458 0 + 785044 I e chlSab2.chr22 101064207 0 + 101219884 I e cerAty1.NW_012001605v1 6474834 0 + 6739814 I e macNem1.NW_012010856v1 11361516 0 + 11645122 I e rheMac8.chr2 424024 0 + 204787373 I e macFas5.chr2 265356 0 - 192460366 C e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I a score=2692.000000 s hg38.chr22_KI270732v1_random 36409 2 + 41543 tg s panPan2.chr3 77927165 2 + 205426864 tg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87343 2 + 12760026 tg i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259207 2 + 20583478 tg i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6522 2 - 27701 TA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s macFas5.chr2 265356 2 - 192460366 TA i macFas5.chr2 C 0 C 0 s chlSab2.chr22 155870 2 - 101219884 tg i chlSab2.chr22 I 28 C 0 e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e manLeu1.NW_012099043v1 509458 0 + 785044 I e cerAty1.NW_012001605v1 6474834 0 + 6739814 I e macNem1.NW_012010856v1 11361516 0 + 11645122 I e rheMac8.chr2 424024 0 + 204787373 I e canFam3.chr31 28873921 0 - 39895921 C e panTro5.chr20 30148352 42 + 66533130 I a score=3767.000000 s hg38.chr22_KI270732v1_random 36411 2 + 41543 tg s panTro5.chr20 36383671 2 - 66533130 tg i panTro5.chr20 I 42 C 0 s panPan2.chr3 77927167 2 + 205426864 tg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87345 2 + 12760026 tg i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259209 2 + 20583478 tg i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6524 2 - 27701 TA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s macFas5.chr2 265358 2 - 192460366 TA i macFas5.chr2 C 0 C 0 s chlSab2.chr22 155872 2 - 101219884 tg i chlSab2.chr22 C 0 C 0 e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e manLeu1.NW_012099043v1 509458 0 + 785044 I e cerAty1.NW_012001605v1 6474834 0 + 6739814 I e macNem1.NW_012010856v1 11361516 0 + 11645122 I e rheMac8.chr2 424024 0 + 204787373 I e canFam3.chr31 28873921 0 - 39895921 C a score=5828.000000 s hg38.chr22_KI270732v1_random 36413 2 + 41543 tg s panTro5.chr20 36383673 2 - 66533130 tg i panTro5.chr20 C 0 C 0 s panPan2.chr3 77927169 2 + 205426864 tg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87347 2 + 12760026 tg i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259211 2 + 20583478 tg i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6526 2 - 27701 tg i nomLeu3.chrUn_GL398098_1 C 0 C 0 s macFas5.chr2 265360 2 - 192460366 TA i macFas5.chr2 C 0 C 0 s chlSab2.chr22 155874 2 - 101219884 tg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275777 2 - 785044 tg i manLeu1.NW_012099043v1 I 48 C 0 e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e cerAty1.NW_012001605v1 6474834 0 + 6739814 I e macNem1.NW_012010856v1 11361516 0 + 11645122 I e rheMac8.chr2 424024 0 + 204787373 I e canFam3.chr31 28873921 0 - 39895921 C a score=86581.000000 s hg38.chr22_KI270732v1_random 36415 15 + 41543 tgtgtgtgtgtgtTT s panTro5.chr20 36383675 15 - 66533130 tgtgtgtgtgtgttt i panTro5.chr20 C 0 C 0 s panPan2.chr3 77927171 15 + 205426864 tgtgtgtgtgtgttt i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87349 14 + 12760026 tgtgtgtgtgtg-tT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259213 15 + 20583478 tgtgtgtgtgtgttt i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6528 15 - 27701 cgtgtgtgtgtgttt i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363548 15 - 204787373 tgtgtgtgtgtgttt i rheMac8.chr2 I 28 C 0 s macFas5.chr2 265362 15 - 192460366 tgtgtgtgtgtgttt i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283805 15 - 11645122 tgtgtgtgtgtgttt i macNem1.NW_012010856v1 I 48 C 0 s cerAty1.NW_012001605v1 265171 15 - 6739814 tgtgtgtgtgtgttt i cerAty1.NW_012001605v1 I 48 C 0 s chlSab2.chr22 155876 15 - 101219884 tgtgtgtgtgtgttt i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275779 15 - 785044 tgtgtgtgtgtgttt i manLeu1.NW_012099043v1 C 0 C 0 e calJac3.chr21 17671891 0 + 50472720 I e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e canFam3.chr31 28873921 0 - 39895921 C a score=80748.000000 s hg38.chr22_KI270732v1_random 36430 18 + 41543 TGGGGGGGTGGGTATGCA s panTro5.chr20 36383690 18 - 66533130 tgggtgggtgggtatgca i panTro5.chr20 C 0 C 0 s panPan2.chr3 77927186 18 + 205426864 tgggtgggcagttatgcg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87363 18 + 12760026 TGGGTGGGTGGGTATGCA i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259228 18 + 20583478 tgggcgggtgggtatgcg i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6543 18 - 27701 tgggtgggtgggtgtgcc i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363563 18 - 204787373 tgggtgggtgggtatgag i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265377 18 - 192460366 tgggtgggtgggtatgag i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283820 18 - 11645122 tgggtgggtgggtatgag i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 265186 18 - 6739814 tgggtgggtgggtatgag i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155891 12 - 101219884 tgggtgggtgg------g i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275794 18 - 785044 tgggtgggtgggtatgag i manLeu1.NW_012099043v1 C 0 C 0 s calJac3.chr21 32800991 10 - 50472720 TGGGGGGGTA-------- i calJac3.chr21 I 18 C 0 e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e otoGar3.GL873528 20837904 0 + 38779656 C e colAng1.NW_012123820v1 10796527 0 + 10971483 I e canFam3.chr31 28873921 0 - 39895921 C a score=9406.000000 s hg38.chr22_KI270732v1_random 36448 2 + 41543 TG s panTro5.chr20 36383708 2 - 66533130 tg i panTro5.chr20 C 0 C 0 s panPan2.chr3 77927204 2 + 205426864 ta i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87381 2 + 12760026 TG i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259246 2 + 20583478 ta i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6561 2 - 27701 tg i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363581 2 - 204787373 ta i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265395 2 - 192460366 ta i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283838 2 - 11645122 ta i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 265204 2 - 6739814 ta i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155903 2 - 101219884 ta i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275812 2 - 785044 ta i manLeu1.NW_012099043v1 C 0 C 0 s otoGar3.GL873528 20837904 2 + 38779656 TG i otoGar3.GL873528 C 0 C 0 e calJac3.chr21 32801001 0 - 50472720 C e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e cebCap1.NW_016107322v1 7753295 81 + 14377064 I e saiBol1.JH378168 2115678 0 + 13128814 I e colAng1.NW_012123820v1 10796527 0 + 10971483 I e canFam3.chr31 28873921 0 - 39895921 C a score=92801.000000 s hg38.chr22_KI270732v1_random 36450 10 + 41543 TGAGTTTGTG s panTro5.chr20 36383710 10 - 66533130 tgagtttgtg i panTro5.chr20 C 0 C 0 s panPan2.chr3 77927206 10 + 205426864 tgattttgtg i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87383 10 + 12760026 TGAGTTTGTG i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259248 10 + 20583478 tgagtttgtg i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6563 10 - 27701 tgtgtttgtg i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363583 10 - 204787373 tgagtttgtg i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265397 10 - 192460366 tgagtttgtg i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283840 10 - 11645122 tgagtttgtg i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 265206 10 - 6739814 tgagtttgtg i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155905 10 - 101219884 tgagtttgtg i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275814 10 - 785044 tgagtttgtg i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 175101 10 - 10971483 TGAGTTTGTG i colAng1.NW_012123820v1 I 2 C 0 s calJac3.chr21 32801001 10 - 50472720 TGAGTTTTTG i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7753376 10 + 14377064 TGAGTTTTTG i cebCap1.NW_016107322v1 I 81 C 0 s otoGar3.GL873528 20837906 10 + 38779656 TGTGTTTACA i otoGar3.GL873528 C 0 C 0 e aotNan1.NW_018487195v1 4214626 92 - 9889416 I e saiBol1.JH378168 2115678 0 + 13128814 I e canFam3.chr31 28873921 0 - 39895921 C a score=288285.000000 s hg38.chr22_KI270732v1_random 36460 27 + 41543 TGTGTGGTATTTTACAA-------GAACACATAG s panTro5.chr20 36383720 27 - 66533130 tgtgtgGTATTTTACAA-------GAACACGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr3 77927216 27 + 205426864 tttgtgGTATTTTATAA-------GAACACGTAG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87393 27 + 12760026 TGTGTGGTATTTTACAA-------GAACACGTAG i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259258 27 + 20583478 tgtgtgGTATTTTACAA-------GAACACGTAG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6573 27 - 27701 tgtgtgGTATTTCACAG-------GAACACGTAG i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363593 27 - 204787373 tgtgtgGTATTTTACAA-------GAACACGTAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 265407 27 - 192460366 tgtgtgGTATTTTACAA-------GAACACGTAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 283850 27 - 11645122 tgtgtgGTATTTTACAA-------GAACACGTAG i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 265216 27 - 6739814 tgtgtgGTATTTTACAA-------GAACACGTAG i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 155915 27 - 101219884 tgtgtgGTATTTTACAA-------GAACACGTAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 275824 27 - 785044 tgtgtgGTATTTTACAA-------GAACACGTAG i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 175111 27 - 10971483 TGTGTGGTATTTTATAA-------GAACACGTAG i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32801011 34 - 50472720 TGTGTGGTATTTTACCACATCAGTAAACATGTAG i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7753386 27 + 14377064 TGTGTGGTATTTTACAA-------GAACATGTAG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4214718 27 - 9889416 TGTGTGGTATTTTACAA-------GAACATGTAG i aotNan1.NW_018487195v1 I 92 C 0 s otoGar3.GL873528 20837916 24 + 38779656 TGTTTGGAATTTCACAA-------GAACATA--- i otoGar3.GL873528 C 0 C 0 e saiBol1.JH378168 2115678 0 + 13128814 I e canFam3.chr31 28873921 0 - 39895921 C a score=4512925.000000 s hg38.chr22_KI270732v1_random 36487 420 + 41543 CATATAAAGTTGTTGGGATTTTGAAGAAAAGTTTTTGGATGTTTGTTTCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACATTTTAAAATTTCAAGAACCTATTCT-TAAAGGATGTGATGTTCTTTAGAAATTAAATGAAAAAACGTGACGTTTCTCATTCTTCTGCCAAGCGTATTTAGGGGAAATTAATGAT-AGAGTGGAGCTGCAAGTTTGTGGCATCCTGAAATGTCTG----TTGGAGAGTAGAAAAGGGCCATAGAGTTTGTAATAAGGC-TTTCA---ATATTGACTTGATCAATAGCTGTATGGAGTGGTTTGTGCCAAATCTAGTATCTGTG-AATGTATTTTGTGATAAGTATTG---------------------------------------------TATTATTTTT-GGAGGTGTGTTGCCTGCTCAGAT-ACAAATTGCAATTCTGTATTTT-ATGTGATAAAACAT s panTro5.chr20 36383747 418 - 66533130 CATATAAAGTTGTTGTGATTTTGAAGAAAAGTTTTTGGATGTTTGTTTCT-------------------------------------------------------------TTTCATTAG-GGTTTTTAAATTTT-ACATTTTAAAATTTCAAGAACCTATTCT-TAAAGGATGTGATGTTCTTTAGAAATTAAATGAAAAA-TGTGACGTTTCTCATTCTTCTGCCAAGTGTATTTAGGGGAAATTAATGAT-AGAGTGGAACTGCAAGGTTGTGGCATCCTGAAATGTCTG----TTGGAGAGTAGAAAAGGGCCATAGATTTTGTAATAAGGC-TTTCA---ATACTGATTTGATCAATAGCTGTATGGAGTGGTTTGTGCCAAATCTAGTATCTGTG-AATGTATTTTGT-ATAAGTATTG---------------------------------------------TATTATTTTT-GGAGGTATGTTGCTTGCTCAGAT-ACAAATTGCAATTCTGTATTTT-ATGTGATAAAACAT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77927243 465 + 205426864 CATATAAAGTTTTTGTGATTTTGAAGAAAAGTTTTTGGATGTTTGTTTAT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACATTTTAAAATTTCAAGAACCTATTCT-TAAAGGATGTGATGTTCTTTAGAAATTAAATGAAAAA-TGTGATGTTTCTCATTCTTCCGCCAAGTGTATTTAGGGGAAATTAATGAT-AGAGTGGAGCTGTAAGGTTGTGGCATCCTGAAATGTCTG----TTGGAGAGTAGAAAAGGGCCATAGATTTTGTAATAAGGC-TTTCA---ATACTGATTTGATCAATAGCTGTATGGAGTGGTTTGTGCCAAATCTAGTATCTGTG-AGTGTATTTTGTGATAAGTATTGTTTttggaggtgtgttggaggttttggaggtgtgttTTGGAGGATTATTATTTTT-GGAGATGTGTTGCCTGCTCAGATAACAAATTGCATTTCTGTATTTT-ATGTGATAAAACGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87420 414 + 12760026 CATATAAAG---TTGTGATTTTGAAGAAAAG-TTTTGGATGTTTGTTTCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACATTTTAAAATTTCAAGAACCTATTCT-TAAAGGATGTGATGTTCTTT-GAAATTAAATGAAAAA-TGTGATG-TTCTCATTCTTCTGCCAAGTGTATTTAGGGGAAATTAATGAT-AGAGTGGAGCTGCAAGGTTGTGGCATCCTGAAATGTCTG----TTGGAGAGTAGAAAAGGGCCATAGATTTTGTAATAAGGCTTTTCA---ATACTGATTTGATCAATAGCTGTATGGAGTGGTTTGTGCCAAATCTAGTATCTGTG-AATGTATTTTGTGATAAGTATTG---------------------------------------------TATTATTTTTGGGAGGTGTGTTGCCTGCTCAGAT-ACAAATTGCAATTCTGTATTTT-ATGTGATAAAAC-T i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259285 419 + 20583478 CATATAAAGTTTTTGTGATTTTGAAGAAAAGTTTTTGGATGTTTGTTTCT-------------------------------------------------------------TTTCTTTAA-GGTTTGTATGTTTT-ACATTTTAAAATTTCAAGAACCTATTCT-TAAAGGATGTGATGTTCTTTAGAAATTAAATGAAAAA-TGTGACGTTTCTCATTCTTCTGCCAAGTGTATTTAGGGGAAATTAATGAT-AGGGTGGAGCTGCAAGGTTGTGGCATCCTGAAATGTCTG----TTGGAGAGTAGAAAAGGGCCATAGATTTTGTAATAAGGC-TTTCA---ATACTGATTTGATCAATAGCTGTATGGCGTGGTTTGTGCCAAATCTAGTATCTGTG-AATGTATCTTGTGATAAGTATTG---------------------------------------------TATTATTTTT-GGAGGTGTGTTGCCTGCTCAGAT-ACAAATTGCAGTTCCGTATTTT-ATGTGATAAAGTTT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 6600 480 - 27701 CATATAAAGTTGTTGTGATTTTGAAGAAAAGTTTTTGGATGTTTGTCTCTTTAGGGTTTTTATGTTTTTGGATGTTTGTCTCTTTAGGGTTTTTATGTTTTTGGATGTTTGTTCCTTTAG-GGTTTTTATGTTTT-ACATTTTAAAATTTCAAGAACCTATTCT-TAAAGGATGTGATGTTCTTTAGAAATTAAATGAAAAA-TGTGACGTTTCTCGTTCTTCTGCCAAGTGTATTTAGGGGAAATTAATGAT-AGAGTGGAGCTGCAAGGTTGTGGCATCCTGAAATGTCTG----TTGGAGAGTAGAAAAGGGCCATAGATTTTGTAATAAGGC-TTTCA---ATACTGATTTGATCAATAGCTGTATGGAGTGGTTTGTGCCAAATCTAGTATCTGTG-AATGTATTTTGTGATAAGTATTG---------------------------------------------TATTATTTTT-GGAGATGTGTTGCCTGCTCAGAT-ACAAATTGCAATTCTGTATTTT-ATGTGATAAAACAT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204363620 418 - 204787373 CATATAAAGATTTTGTGATTTGGAAGACAAG-TTTTCGATGTTTGTTCCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACATTGTAAAATTTCAAGAACCTTTTCT-TAAAGGATGTGACGTTCTTTAGAAATTAAATGAAAAA-TGTGATGTTTCTCATTCTTCTGCCAAGTGTATTTAGAGGAAGTTAATGAT-AGAGTGGAACTGCAAGGTTGTGGCATCCTGAAATGTCTC----TTGGAGAGCGGAAAAGGGCCATAGATTTTGAAATAAGGC-TTTCA---ATAGTGATTTGATCAATAGCTGCATGGAGTGGTTTGTGCCAAATCTAGTATTTGTT-CATGTATTTTGTGGTAACTATTG---------------------------------------------TATTGTTTTT-GGAGGTGTGTTGCCTGCTCAGAT-ACAAATTTCAATTCCATATTTT-ATGTGATAAAATGT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 265434 418 - 192460366 CATATAAAGATTTTGTGATTTGGAAGACAAG-TTTTCGATGTTTGTTCCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACATTGTAAAATTTCAAGAACCTTTTCT-TAAAGGATGTGACGTTCTTTAGAAATTAAATGAAAAA-TGTGATGTTTCTCATTCTTCTGCCAAGTGTATTTAGAGGAAGTTAATGAT-AGAGTGGAACTGCAAGGTTGTGGCATCCTGAAATGTCTC----TTGGAGAGCGGAAAAGGGCCATAGATTTTGAAATAAGGC-TTTCA---ATAGTGATTTGATCAATAGCTGCATGGAGTGGTTTGTGCCAAATCTAGTATTTGTT-CATGTATTTTGTGGTAACTATTG---------------------------------------------TATTGTTTTT-GGAGGTGTGTTGCCTGCTCAGAT-ACAAATTTCAATTCCATATTTT-ATGTGATAAAATGT i macFas5.chr2 C 0 I 1 s macNem1.NW_012010856v1 283877 418 - 11645122 CATATAAAGATTTTGTGATTTGGAAGACAAG-TTTTCGATGTTTGTTCCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACATTGTAAAATTTCAAGAACCTTTTCT-TAAAGGATGTGACGTTCTTTAGAAATTAAATGAAAAA-TGTGATGTTTCTCATTCTTCTGCCAAGTATATTTAGGGGAAGTTAATGAT-AGAGTGGAACTGCAAGGTTGTGGCATCCTGAAATGTCTC----TTGGAGAGCGGAAAAGGGCCATAGATTTTGAAATAAGGC-TTTCA---ATAGTGATTTGATCAATAGCTGCATGGAGTGGTTTGTGCCAAATCTAGTATTTGTT-CATGTATTTTGTGGTAACTATTG---------------------------------------------TATTGTTTTT-GGAGGTGTGTTGCCTGCTCAGAT-ACAAATTTCAATTCCATATTTT-ATGTGATAAAATGT i macNem1.NW_012010856v1 C 0 I 1 s cerAty1.NW_012001605v1 265243 418 - 6739814 CATATAAAGATTTTGTGATTTGGAAGACAAG-TTTTCGATGTTTGTTCCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACATTGTAAAATTTCAAGAACCTTTTCT-TAAAGGATGTGACGTGCTTTAGAAATTAAATGAAAAA-TGTGATGTTTCTCATTCTTCTGCCAAGTGTATTTAGGGGAAATTAATGAT-AGAGTGGAACTGCAAGGTTGTGGCATCCTGAAATGTCTC----TTGGAGAGTAGAAAAGGGCCATAGATTTTGAAATAAGGC-TTTCA---ATAGTGATTTGATCAATAGCTGCATGGAGTGGTTTGTGCCAAATCTAGTGTTTGTT-AATGTATTTTGTGGTAACTATTG---------------------------------------------TATTGTTTTT-GGAGGTGTGTTGCCTGCTCAGAT-GCAAATTTCAATTCCATATTTT-ATGTGATAAAATGT i cerAty1.NW_012001605v1 C 0 I 1 s chlSab2.chr22 155942 418 - 101219884 CATATAAAGATTTTGTGATTTGGAAGACAAG-TTTTCGATGTTTGTTTCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACATTGTAAAATTTCAAGAACCTTTTCT-TAAAGGATGTGACGTTCTTTAGAAATTAAATGAAAAA-TGTGATGTTTCTCATTCTTCTGCCAAGTGTATTTAGGGGAAATTAATGAT-AGAGTGGAACTGCAAGGTTGTGGCATCCTGAAATGTCTC----TTGGAGAGTAGAAAAGGGCCATAGATTTTGAAATAAGGC-TTTCA---ATAGTGATTTGATCAATAGCTGCATGGAGTGGTTTGTGCCAAATCTAGTATTTATT-AATGTATTTTGTGGTAACTATTG---------------------------------------------TATTGTTTTT-GGAGGTGTGTTGCCTGCTCAGAT-ACAAATTTCAATTCCATATTTT-ATGTGACAAAATGT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012099043v1 275851 418 - 785044 CATATAAAGATTTTGTGATTTGGAAGACAAG-TTTTCGATGTTTGTTCCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-ACGTTGTAAAATTTCAAGAACCTTTTCT-TAAAGGATGTGACGTTCTTTAGAAATTAAATGAAAAA-TGTGATGTTTCTCATTCTTCTGCCAAGTGTATTTAGGGGAAATTAATGAT-AGAGTGGAACTGCAAGGTTGTGGCATCCTGAAATGTCTC----TTGGAGAGTAGAAAAGGGCCATAGATTTTGAAATAAGGC-TTTCA---ATAGTGATTTGATCAATAGCTGCATGGAGTGGTTTGTGCCAAATCTAGTGTTTGTT-AATGTATTTTGTGGTAACTATTG---------------------------------------------TATTGTTTTT-GGAGGTGTGTTGCTTGCTCAGAT-ACAAATTTCAATTCCATATTTT-ATGTGATAAAATGT i manLeu1.NW_012099043v1 C 0 I 1 s colAng1.NW_012123820v1 175138 418 - 10971483 CATATAAAGTTTTCGTGATTTTGAAGACAAG-TTTTCGATGTTTGTTTCT-------------------------------------------------------------TTTCTTTAG-GGTTTTTATGTTTT-GCATTTTAAAATTTCAAGAACCTTTTCT-TAAAGGATGTGATGTTCTTTAGAAATTAAATGAAAAA-TGTGATGTTTCTCATTCTTCTGCTAAGTGTATTTAGGGGAAATTAATGAT-AGAGTGGAACTGCAAGGTTGTGGCATCCTGAAATGTCCC----TTGGAGAGTAGAAAAGGGCCATAGATTTTGAAATAAGGC-TTTCA---ATAGTGATTTGATCAATAGCTGCATGGAGTGGTTTGTGCCAAATCTAGTATTTGTT-ATTGTATTTTGTGATAACTATTG---------------------------------------------TATTATTTTT-GGAGGTGTGTTGCCTGCTCAGAT-ACAAATTTCAATTCCATATTTT-ATGTGATAAAATGT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32801045 415 - 50472720 CATATAAAGCTTTTGTGATTTTGAATAAAAGTTTTCAGATATTTGTTTCT-------------------------------------------------------------TTAGT-----GACTTTTACTTTTG-ACTTTTTTAAATTTCAAGAACATATTCT-TAAAGGATGTGATGTTATTTAGAAATTAAGTGAAAAA-TGTGATGTTTCACATTCTCCTGCCAAGGGTATTTAGGGGAAATTAATGAT-AGAGTGGAGCTGCAAGGTTGTGGTATCCTGGAATGTCTC----TTGAAGAGTAGAAAAGGGCCATAGATTTTGTAATAAGAT-TTTCA---ATGCTGATTTGATCAATAGCTGTACGGAGTGGTTTATACCAAATCTAGTATCTGTG-AATGTATTTTGTGATAAATACTG---------------------------------------------TATTACTTTT-GGAGGTGTGTTGCCTGCTTATTT-ACAAATTGCAATTTTATATTTT-ATGTGATTAAAAAG i calJac3.chr21 C 0 I 1 s cebCap1.NW_016107322v1 7753413 416 + 14377064 CATATAAAGCTTTTGTGATTTTGAAGAAAAGTttttgtatgtttgtttct-------------------------------------------------------------ttagt-----gatttttatgtttt-acttttttaAATTTCAAGAACACATTCT-TAAAGGATGTGATGTTATTTAGAAATTAAGTGAAAAA-TGTGATGTTTTGCATTCTCCTGCCAAGTGTATTTAGGAGAAATTAATGAT-ACAGTGGAGCTGCAAGGTTATGGTATCCTGAAATGTCTC----TTGGAGAGTAGAAAAGGGCCATGGATTTTGTAATAAGGC-TTTCA---ATGCTGATTTGATCAATAGCTGTATGGAGTGGTTTATACCAAATATGGTATCTGTG-AATGTATTTTGTGATAAGTATTG---------------------------------------------TATTATTTTT-GGAAGTGTGTTGCCTGCTCATTT-ACAAATTGCAATTTTATATTTTAATGTGATTAAAAAG i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 4214745 410 - 9889416 CATATAAAGTTTTTGTGATTTTGAAGAAAAGTTTTCGGATGTTTGTTTCT-------------------------------------------------------------GTAGT-----GATTTTTATGTTTT-ACTTTTTTAAATTTCAAGAACCTATTCT-TAAAGGATGTGATGTTATTTAGAAATTAAGTGAAAAA-TGTGATGTTTCGCATTCTCCTGCCAAGTGTATTTCT-----ATTAATGAT-AGAGTGGAGCTGCAAGGTTGTGATATCCTGGAATGTCTC----TTGGAGAGTAGAAAAGGGCCATAGATTTTGTAATTAGGC-TTTCA---ATGCTGATTTGATGAATAGCTGTATGGAGTGGTTTATACTAAATCTAGTATCTGTG-AATGTATTTTGTGATAAGTATTG---------------------------------------------TATTATTTTT-GGAGGTGCGTTGCCTGCTCATTT-ACAAATTGCAATTTTATATTTT-ATGTGATTAAAAAG i aotNan1.NW_018487195v1 C 0 I 1 s otoGar3.GL873528 20837940 392 + 38779656 -ATGTAAAGGTTTCA-ATTTTTGAAGAGAAGTTTTTGGA--TCTGTTTCT-------------------------------------------------------------TTGGT-----GATTCTTGTGTTTTAATTTTTTTAAGTTTCAAGAACATATTCT-TAAAAGATGTGATGTTCTTCAGAAATTAAGTGAAAAA-TTTGATGTTCCTTGTGCCTCTGCCAGGCGCATTT--GGGAAAT--GTGATAAGAGTGGAGTTGTAAGATTGTGGTGTCTGGACATGTCCT----TTGGAAAGC-------------AGATTTTGTAATAAGGT-TGTCA---ATACTGATTTGATCAATAGCTGTGTGGTGTGGTTTATGCCAAAGCTAGTACCTGGG-AATGTACTTTGTGATAA-TATTG---------------------------------------------GGTTATGTTT-GGAAGTTTGGTACCTGCTCAGAA-ACAGATTGAGGTGTAATATTGT-ATGTAGGAAGT--- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28873921 411 - 39895921 TACTTGAAGGTTTTATGTTTTTGAAGAAAAGCTTCTGGATCTCTGTTTCA-------------------------------------------------------------TTTCTTGAGTGGttttta--tttt-aattttttaaatttCAAGAACATAGTCTCCAAAAGGTACAACGTTCTTCAGAAATTAAGTGAAAAG-TTTGATGTTTCTCATTACTCTGCCACGTGTATTTGGAGGAAATTAATGGT-AGAG-------------CTGCGGTGTCCTGAAATGTCTGTCATTTGCAGAGTAGGAAAGGACCATAGATTTTGTAATAAGGT-TTTTCTGTGTACTGATTTGATCAATAGCTGTATGGAGTGGTTTAAGCCAAAGCTAGTACCTTTGAAATGTGTTTTGTG--AAGTGTTG---------------------------------------------TGTTATTTTT-GGAGGTGTGTTGCCTATTTAGAT-ACAAATTGCTATTTAATGTTTT-GTATGAAAAAAGT- i canFam3.chr31 C 0 C 0 e saiBol1.JH378168 2115678 0 + 13128814 I a score=5773398.000000 s hg38.chr22_KI270732v1_random 36907 520 + 41543 CCTGACACC-CCTGAAATTTTCTTTTCCTCTTGGGTCAAGTATA-TTTGGCATTGATTTTCTGCAATT-TCAAGGCTTGAAATGAAATCTGTGAGCAAGAAGTTCACAGAGTTTATTTCAAGGGATAGG------------TATTTTTCTAGAGATAAAATTGAAAGCGTGCAGTGTTATTATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTT----------GAAGTATCTAATAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAAGGGCA--GTTTTCTTGCCATATGTAATATTGTTCAATGAATTTTTGAAATGAAATAG---ATATTTTTCAAAACCACAAGTGCATGTGTGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGATAATACAATTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGC----CAGAGTTTATATTAGCATTTAATAGAATTCTCA--TT---TTTA---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTA----TTTTCACCAAAGGT s panTro5.chr20 36384165 524 - 66533130 CCTGACACC-CCTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCATTGATTTTCTGCATTT-TCAAGGCTTGAAATGAAATCTGTGAGCAGGAAGTTCACAGAGTTTATTTCAAGGGATAGG------------TATATTTCTCCAGATAAAATTGAAAGTGTGCGGTGTTAT---ATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTT----------GAAGTATCTAATAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAACAGCA--GTTTTCTTGCCATATGTAATATTGTTCAGTGAATTTTTGAAATGAAATAG---ATATTTTTCAAAACCACAAATGCATCTGTGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGATAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATTTAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGGAG-TTTTTTCACCAAAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77927708 525 + 205426864 CCTGACACC-CCTGAAATTTTCTTTTCCTTTTGGGGCAAGTGTA-TTTGGCATT--TTTTCCGCATTT-TTAAGGCTTGAAATGAAATCTGTGAGCAGGAAGTTCACAGAGTTTATTTCAAGGGATAGG------------TGTATTACTCCAGATAAAATTGAAAGTGTGCAGTGTTATTATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTT----------GAAGTATCTAATAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATATTGTTCAATGAATTTTTGAAATGAAATAG---ATATTTTTCAAAACCACAAATGCATGTGTGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGATAATATATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATCTAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTAG-TTTTTTCACCAAAGGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 87834 522 + 12760026 CCTGACACC-CCTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCATT-ATTTTCTGCATTT-TCAAGGCTTGAAATGAAATCTGTGAGCAGGAA-TTCACAGAGTTTATTTCAAGGGATAGG------------TATATT-CTCCAGATAAAATTGAAAGTGTGCAGTGTTATTATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTT----------GAAGTATCTAATAAA---------------------TTTA---ACACTTTTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATATTGTTCAATGAATTTTTGAAATGAAATAG---ATATTTTTCAAAACCACAAATGCATGTGTGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGATAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATTT-ATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTAG-TTTTTTCACCAAAGGT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20259704 525 + 20583478 CCTGACACC-CTTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCTTT--TTTTCTGTATTT-TCAATGCTTGAAATGAAATCTGTGAGCAGGAAGTTCACAGAGTTTATTTCAAGGGATAGC------------TATATTACTCCAGATAAAATTGAAAGCGTGCAGTGTTATTATACAATTGTGATGAA---GTTGAGC-TTTGCTAGTTT----------GAAGTATCTAACAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATGTTGTTCAATGAATGTTTGAAATGAAATAG---ATATTTTTCAAAACCACAAATGCATGTGTGCCTTTGAATATGAATAGTTGTATATACATGTAAGCAGATAATACATTTTGTTGATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATCTAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATA-TCAATACACATAGTAGTTTTTTTCACCAAAGGT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 7080 527 - 27701 CCTGACACC-CCTGAAATTTTCTTTTCCTTTCGGGGCAAGTCTA-TTTGGCATTGATTTTCTGCATTT-TCAAGGCTTGAAATGAAATCTGTGAGCAGGAAGTTTACAGAG-TTATTTCAAGGGATAGG------------TATATTTCTCCAGATAAAATTGAAAGTGTGCAGTGTTATTATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTT----------GAAGTATCTAATAAA--------------------GTTTA---ACACTTTTTAAAAGACCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATATTGTTCAATGAAGTTTTGAAATGAAATAG---ATATTTTTCAAAACCACAAATGCATCTGTGCCTTTGTATATGAACAGTTGTATATACATGTAAGCAGATAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCCTGTCATTCAGAATTTGTATTTGCATCTAATAGAATTCTCA--TT---TCTC---TTTTTCGTGATAAAACTAATGTAAAA----TATATTCAATACACATAGTAGTTTTTTTCACCAAAGGT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204364039 524 - 204787373 CCTGACACC-CCTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCATT-TTTTTCTGCATTT-TCAAGGCTTGAAATGAAATCTCTGAGCAGGAAGTT--CAGAGTTTATTTCAAGGGATAGG------------TATATTACTCCAGATAAAATTGAGTGTGTGCAGTGGTATCATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTC----------AAAGTATCTAAGAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATATTGTTCAATAAATTTTTGAAATTAAATAG---TTACTTTTCAAAACCACAAATACGTGTGTGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGAAAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATCCAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTAG-TTTCTTCACCAAACGT i rheMac8.chr2 I 1 C 0 s macFas5.chr2 265853 524 - 192460366 CCTGACACC-CTTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCATT-TTTTCCTGCATTT-TCAAGGCTTGAAATGAAATCTCTGAGCAGGAAGTT--CAGAGTTTATTTCAAGGGATAGG------------TATATTACTCCAGATAAAATTGAGTGTGTGCAGTGGTATCATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTC----------AAAGTATCTAAGAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATATTGTTCAATAAATTTTTGAAATTAAATAG---TTACTTTTCAAAACCACAAATACGTGTGTGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGAAAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATCCAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTAG-TTTCTTCACCAAACGT i macFas5.chr2 I 1 C 0 s macNem1.NW_012010856v1 284296 524 - 11645122 CCTGACACC-CTTGAAATTTTCTTTTACTTTTGGGGCAAGTATA-TTTGGCATT-TTTTTCTGCATTT-TCAAGGCTTGAAATGAAATCTCTGAGCAGGAAGTT--CAGAGTTTATTTCAAGGGATAGG------------TATATTACTCCAGATAAAATTGAGTGTGTGCAGTGGTATCATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTC----------AAAGTATCTAAGAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATATTGTTCAATAAATTTTTGAAATTAAATAG---TTACTTTTCAAAACCACAAATACGTGTGTGCCTTTGTATATGAATAGTTGTATATACATTTAAGCAGAAAATACATTTTGTTAATTAAGATCAGCTTTGATTCT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATCCAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTAG-TTTCTTCACCAAACGT i macNem1.NW_012010856v1 I 1 C 0 s cerAty1.NW_012001605v1 265662 524 - 6739814 CCTGACACC-CTTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCATT-TTTTTCTGCATTT-TCAAGGCTTGAAATGAAATCTCTGAGCAGGAAGTT--CAGAGTTTATTTCAAGGGATAGG------------TATATTACTCCAGATAAAATTGAGAGTGTGCAGTGGTATCATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTC----------AAAGTATCTAAGAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGTCATATGTAATATTGTTCAATAAATTTTTGAAATTAAATAG---TTACTTTTCAAAACCACAAATACGTGTGTGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGAAAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCCGAATTTATATTAGCATCCAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTAG-TTTCTTCACCAAACGT i cerAty1.NW_012001605v1 I 1 C 0 s chlSab2.chr22 156361 521 - 101219884 CCTGACACC-CTTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCATT-TTTTCCTGCATTT-TCAAGGCTTGAAATGAAATCTCTGAGCAGGAAGTT--CAGAGTTTATTTCAAGGGATAGG------------TATATTACTCTAGATAAAATTGAAAGTGTGCAGTGGTATCATATAATTGTGATGAA---GTTGAGC-TTTGCTAATTC----------AAAGTATCTAAGAAA--------------------GTTTA---ACAC--TTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATATTGTTCAATAAATTTTTGAAATTAAATAG---TTACTTTTCAAAACCACAAATACGTGTGTGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGAAAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATCCAATAGAA-TCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATATAAAA----TATATTTAATACACATAGTAG-TTTCTTCACCAAATGT i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012099043v1 276270 520 - 785044 CCTGACACC-CTTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCATT-TTTTTCTGCATTT-TCAAGGCTTGAAATGAAATCTCTGAGCAGGAAGTT--CAGAGTTTATTTCAAGGGATAGG------------TATGTTACTCCAGATAAAATTGAGAGTGTGCAGTGGTATCATATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTC----------AGAGTATCTAAGAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAAGAGCA--GTTTTCTTGCCATATGTAATATTGTTCAATAAATTTTTGAAAT----TAG---TTACTTTTCAAAACCACAAATACGTGTGTGCCTTTGTATATGAATAATTGTATATACATGTAAGCAGAAAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTAGCATCCAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTAG-TTTCTTCACCGAACGT i manLeu1.NW_012099043v1 I 1 C 0 s colAng1.NW_012123820v1 175556 525 - 10971483 CCTGACACC-CTTGAAATTTTCTTTTCCTTTTGGGGCAAGTATA-TTTGGCATT-TTTTCCTGCATTT-TCAAGGCTTGAAATGAAATCTCCGAGCAGGAAGTTCACAGAGTTTATTTCAGGGGATAGG------------TATATTACTCCAGATAAAATCAAAAGTGTGCAGTGGTATTGTATAATTGTGATGAA---GTTGAGC-TTTGCTAGTTC----------AAAGTATCTAAGAAA--------------------GTTTA---ACACTTTTTAAAAGATCCTTCAAAAC-AGCA--GTTTTCTTGCCATATGTAATATTGTTCAATAAATTTTTGAAATTAAATAG---ATATTTTTCAAAACCACAAATGTGTGTATGCCTTTGTATATGAATAGTTGTATATACATGTAAGCAGAAAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATACCATTCAGCATTTATATTAGCATCCAATAGAATTCTCA--TT---TTTC---TTTTTTGTGATAAAACTAATGTAAAA----TATATTTAATACACATAGTAG-TTCCTTCACCAAATGT i colAng1.NW_012123820v1 C 0 I 48 s calJac3.chr21 32801461 481 - 50472720 CCTGGCACT-CCTGAAATTTTCTTTTCCTTTTTGGGTGAGTATA-TTTGACATT--GTTTCTGTGTTT-TCAATGCTTGAAATGAAAACTGTG-----------------------------------------------------------AGATGAAATTGAAAGTGTGTAATGGTTTTATATAATTGTGATGAA---GTTAAGC-CTTGCTATTTCTTCAGTT-TTGAAATATCTAGTAAA--------------------GTTTA---ACTTTTTAAAAACGATCCTTCATAAAGAGCA--GTTTTCTTGCTATATGTAATATTGTTCAATTATTTTG--AAATGAAATGG---ATATTGTTCAAAACCCCAAATGCATGTGTGTCTTTGTATATGAATAGGTATATATACATGTAAGCAGCTAATACATT---TTAATTAAAATCAGCTTTGATTTT---AATTTTTCTCTCATGGCATTCAGAATTTGTATTAACATCTAATAAAATTATC---CT---TTTT---GTTTTTGTGATAAAACTAATGTAAAA----AATGTTTAATTCACATAGTAG-TTGTTTCACCAAAAAT i calJac3.chr21 I 1 I 48 s saiBol1.JH378168 11012566 483 - 13128814 CCTGACACT-CCTGAAATTTACTTTTTCTTTTGGGGTGAGTATA-TTTGACACT--GTTTATGCATTT-TCAAGGCTTGAAATGAAATCTGTG-----------------------------------------------------------AGATGAAATTGAAAGTGTGTAATGGTATTATATAATTGTGATGAA---GTTGAGC-CTTGCTAGTTCTTCAGTT-TTGAAATATCTAGTAAA--------------------GTTTA---GCTCTTTTAAAATGATCCTTCATAAAGAGCA--GTTTTCTCGTTATATGTAATATTTTTCAATTAATTTT-----TGAAATAG---ATATTTTTCAAAACCACAAATGCATGTGTGCCTTTGTATATGAATAGGTACATATACATGTAAGCAGCCAATATATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTATCATCTAATAAAATTATCA-TTT---TTTT---GTTTTTGTGATAAAACTAATGTAAAA----AATGTTTGATTCATGTAGTAG-TTTTTTCACCAAAAAT i saiBol1.JH378168 M 1195 I 48 s cebCap1.NW_016107322v1 7753830 484 + 14377064 CCTGACACTCCCTGAAATTTTCTTTTCCTTTAGGGGTGAGTATA-TTTGACATT--GTTTCTGCATTT-TCAAGGCTTGAAATGAAATCTGTG-----------------------------------------------------------AGATGAAATTGAAAGTGTGTTATGGAATTATATAATTGTGATGAA---GTTGAGC-CTTGCTAGTTCTTTAGTT-TTGAAATATCTAGTAAA--------------------GTTTA---ACTCTTTTAAAACGATCCTTCATAAAGAGCA--GTTTTCTTGATATACGTAATATTGTTCAATTAATTTTTGAAATGAAATAG---ATATTTTTCAAAACCACAAATGCATGTGtgtctttgtatatgaataggtatatatacatgtaAGCAGCTAGTACAGTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCCTTCATGCCATTCAGAATTTAT------ATCTAATAAAATTACCATTTT---TTTT---GTTTTTGTGATAAAACTAATGTAAAA----AATGCTTAATTCACTTGGTAG-TTTTTTCACCAAAAAT i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 4215156 487 - 9889416 CCTGACACT-CCTGAAATTTTCTTTTCCTTTTGGAGCGAGTAGA-TTTGACATT--GTTTCTGCATTT-TCAAGGCTTAAAATGAAATCTGTG-----------------------------------------------------------AGATGAAATTGAAAGTGTGTAATGGTATTATATAATTGTGATGAA---GTTGAGC-CTTGCTAGTTTTTCAGTT-TTGAAATATCTAGTAAA--------------------GTTTA---ACTCTTTTAAAACGATCCTTCATAAAGAGCA--GTTTTCTTGCTATATGTAATATTGTTCAATTAATTTTTGAAATGAAATAG---ATATTTTTCAAAACCACAAATGCATGTGTGCCTTTGTATATGAATAGGTAGATATACATGTAAGCAGCTAATACATTTTGTTAATTAAGATCAGCTTTGATTTT---AATTTTTCTTTCATGCCATTCAGAATTTATATTATCATCTAATAAAATTACCA--TT---TTTT---GTTTTTGTGATAAAACTAATGTAAAA----AATGTTTAATTCACATTGTAG-TTTTTTCACCAAAAAT i aotNan1.NW_018487195v1 I 1 I 48 s otoGar3.GL873528 20838332 543 + 38779656 CCTGAAATT-CC--AAATTTTTTATTTCCTTGGAAGAAAGTGTA-TTTACTATT--GTTTCTGCATTTATCAAGGCTTGACATGAAATCTGTGAGTGGGAAAGT-------------TATATGGGTAGGACCTATAACTTTTATATTA-TCCAGATAAAAGTAAACATGTGTAATGGTATTATGTAACTGTGATGGA---GTTGAGC-TTTCCTAGTCCTTTGGTTCCCAAAATATCCAATAAATACATATTCTGGTAAATT--AATTA---ACACTTTCAAAGAGAGTATTCAGAAAGAGCA--GATTGCTTGCTGtatataatattgtttaataattttttaaaaaatgaaag---atatatttcaaaaatatGAGTGCATG---GCCTTTGTAGGTGATAAGGTATGTGCACATATATGTGGATAAT--------TTTATTAAGATAAACTTTGATTTT---AA---GTCTTTCATTCTATTAAGAATTTATAGTGTCATCTATTTGAAGTCTCC--TT---TTTCATTTCTTTTATGATACAAATAATATAAGAAAATTACATTTAAGGGGCACAGTAT-GTTTTTCAACAAAAAT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28874332 548 - 39895921 GCTGACCCT-CATGGCATTTATTTTTC--TTGGAGGAGAATCTATTTTGACATT--GCTTCTGCTTTTGTCAAGACT-----TGAAAACTATGAGCAGGAAAGG-------------TATACAAGCAGG------------TACATTACTCTAGATGGAACTGAGAGTGTATAGTGGTGTTATATAATTGTGATAGAGTTGTTGAGCTTTTGCTAGTTCTTCAGTTTCTAAAATATCCAATAAATATTGTGTATATTAAAGTAAGTTTAGTTACTCTTTTGAAAAGATGGTTCAAAAAGAACATTGTTTGCTCACCATACGTAATTTTGTTTAGTGAATTTTTGAAGTGAAACAGGATGACTTTTTCAAAAATAAAAAT--CTGTGTATCTTTGTGTGATAATAGGTATATAT--------GCAGATAACAAATTTTAATGATGAA-ATAGGCTTTGATTTTTAAAGTTTTTCTTTCATGCCATTAAGAATTTATATTAGCATATAGTTGAATTCTCA--TTGCATTTT---TCTTTTTTGATAAAAGTAACGAAAGGAAATCATATTTAATACACATAGTAT-TTTTTTCATCAAAAAT i canFam3.chr31 C 0 C 0 a score=259440.000000 s hg38.chr22_KI270732v1_random 37427 36 + 41543 CTAAAACAAGAATATGTAGACAGTAGCTATGTTGGA s panTro5.chr20 36384689 36 - 66533130 CTCAAACAAGAATATGTAGACAGTAGCTACGTTGGA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 88356 36 + 12760026 CTAAAACAAGAATATGTAGACAGTAGCTACGTTGGA i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260229 36 + 20583478 CTAAAACAAGAATATGTAGACAGTAGCTACGTTGGG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 7607 36 - 27701 CTAAAACAAGAATATATAGACAGTAGCTACGTTGGA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204364563 36 - 204787373 CTAAACCAAGAATATGTAGACAGTAGCTACGTTGGA i rheMac8.chr2 C 0 I 14 s macFas5.chr2 266377 36 - 192460366 CTAAACCAAGAATATGTAGACAGTAGCTACGCTGGA i macFas5.chr2 C 0 I 14 s macNem1.NW_012010856v1 284820 36 - 11645122 CTAAACCAAGAATATGTAGACAGTAGCTACGTTGGA i macNem1.NW_012010856v1 C 0 I 14 s cerAty1.NW_012001605v1 266186 36 - 6739814 CTAAACCAAGAATATATAGACAGTAGCTACGTTGGA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 156882 36 - 101219884 CTAAAACAAGAATATGTAGACAGTAGCTATGTTGGA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 276790 36 - 785044 CTAAACCAAGAATATGTAGACAGTAGCTACGTTGGA i manLeu1.NW_012099043v1 C 0 C 0 s cebCap1.NW_016107322v1 7754314 36 + 14377064 CTAAAACAAGAATATGTAGACAGTACCTACGTTGGA i cebCap1.NW_016107322v1 C 0 I 12 s otoGar3.GL873528 20838875 36 + 38779656 CTAAAACAAGAATCTGTAGGCAGTAGCTCTATTGCA i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28874880 36 - 39895921 CTAAAACAAGAATCTGTAGGCAGCAGCTACATCACA i canFam3.chr31 C 0 C 0 e calJac3.chr21 32801942 48 - 50472720 I e aotNan1.NW_018487195v1 4215643 48 - 9889416 I e saiBol1.JH378168 11013049 48 - 13128814 I e colAng1.NW_012123820v1 176081 48 - 10971483 I e panPan2.chr3 77928233 0 + 205426864 C a score=9828.000000 s hg38.chr22_KI270732v1_random 37463 3 + 41543 TTT s panTro5.chr20 36384725 3 - 66533130 TTT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 88392 3 + 12760026 TTT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260265 3 + 20583478 TTT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 7643 3 - 27701 TTT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s cerAty1.NW_012001605v1 266222 3 - 6739814 TTT i cerAty1.NW_012001605v1 C 0 C 0 s manLeu1.NW_012099043v1 276826 3 - 785044 TTT i manLeu1.NW_012099043v1 C 0 C 0 s otoGar3.GL873528 20838911 3 + 38779656 TTT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28874916 3 - 39895921 TTT i canFam3.chr31 C 0 C 0 e calJac3.chr21 32801942 48 - 50472720 I e aotNan1.NW_018487195v1 4215643 48 - 9889416 I e cebCap1.NW_016107322v1 7754350 12 + 14377064 I e saiBol1.JH378168 11013049 48 - 13128814 I e colAng1.NW_012123820v1 176081 48 - 10971483 I e chlSab2.chr22 156918 0 - 101219884 C e macNem1.NW_012010856v1 284856 14 - 11645122 I e rheMac8.chr2 204364599 14 - 204787373 I e macFas5.chr2 266413 14 - 192460366 I e panPan2.chr3 77928233 0 + 205426864 C a score=9842.000000 s hg38.chr22_KI270732v1_random 37466 4 + 41543 CTGT s panTro5.chr20 36384728 4 - 66533130 CTGT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 88395 4 + 12760026 CTGT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260268 4 + 20583478 CCGT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 7646 4 - 27701 CTGT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s cerAty1.NW_012001605v1 266225 4 - 6739814 CTGT i cerAty1.NW_012001605v1 C 0 C 0 s manLeu1.NW_012099043v1 276829 4 - 785044 CTGT i manLeu1.NW_012099043v1 C 0 C 0 s canFam3.chr31 28874919 4 - 39895921 CTGT i canFam3.chr31 C 0 I 8 e calJac3.chr21 32801942 48 - 50472720 I e aotNan1.NW_018487195v1 4215643 48 - 9889416 I e cebCap1.NW_016107322v1 7754350 12 + 14377064 I e saiBol1.JH378168 11013049 48 - 13128814 I e otoGar3.GL873528 20838914 0 + 38779656 C e colAng1.NW_012123820v1 176081 48 - 10971483 I e chlSab2.chr22 156918 0 - 101219884 C e macNem1.NW_012010856v1 284856 14 - 11645122 I e rheMac8.chr2 204364599 14 - 204787373 I e macFas5.chr2 266413 14 - 192460366 I e panPan2.chr3 77928233 0 + 205426864 C a score=6892.000000 s hg38.chr22_KI270732v1_random 37470 4 + 41543 GGCT s panTro5.chr20 36384732 4 - 66533130 GGCT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 88399 4 + 12760026 GGCT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260272 4 + 20583478 GGCT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 7650 4 - 27701 GGCT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s cerAty1.NW_012001605v1 266229 4 - 6739814 GGTT i cerAty1.NW_012001605v1 C 0 C 0 s manLeu1.NW_012099043v1 276833 4 - 785044 GGTT i manLeu1.NW_012099043v1 C 0 C 0 e calJac3.chr21 32801942 48 - 50472720 I e aotNan1.NW_018487195v1 4215643 48 - 9889416 I e cebCap1.NW_016107322v1 7754350 12 + 14377064 I e saiBol1.JH378168 11013049 48 - 13128814 I e otoGar3.GL873528 20838914 0 + 38779656 C e colAng1.NW_012123820v1 176081 48 - 10971483 I e chlSab2.chr22 156918 0 - 101219884 C e macNem1.NW_012010856v1 284856 14 - 11645122 I e rheMac8.chr2 204364599 14 - 204787373 I e macFas5.chr2 266413 14 - 192460366 I e canFam3.chr31 28874923 8 - 39895921 I e panPan2.chr3 77928233 0 + 205426864 C a score=4664.000000 s hg38.chr22_KI270732v1_random 37474 1 + 41543 A s panTro5.chr20 36384736 1 - 66533130 A i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 88403 1 + 12760026 A i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260276 1 + 20583478 G i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 7654 1 - 27701 A i nomLeu3.chrUn_GL398098_1 C 0 C 0 s cerAty1.NW_012001605v1 266233 1 - 6739814 A i cerAty1.NW_012001605v1 C 0 I 2 s manLeu1.NW_012099043v1 276837 1 - 785044 A i manLeu1.NW_012099043v1 C 0 I 2 s colAng1.NW_012123820v1 176129 1 - 10971483 A i colAng1.NW_012123820v1 I 48 I 1 s calJac3.chr21 32801990 1 - 50472720 A i calJac3.chr21 I 48 C 0 s saiBol1.JH378168 11013097 1 - 13128814 A i saiBol1.JH378168 I 48 C 0 s cebCap1.NW_016107322v1 7754362 1 + 14377064 A i cebCap1.NW_016107322v1 I 12 C 0 s aotNan1.NW_018487195v1 4215691 1 - 9889416 A i aotNan1.NW_018487195v1 I 48 C 0 e otoGar3.GL873528 20838914 0 + 38779656 C e chlSab2.chr22 156918 0 - 101219884 C e macNem1.NW_012010856v1 284856 14 - 11645122 I e rheMac8.chr2 204364599 14 - 204787373 I e macFas5.chr2 266413 14 - 192460366 I e canFam3.chr31 28874923 8 - 39895921 I e panPan2.chr3 77928233 0 + 205426864 C a score=-7744.000000 s hg38.chr22_KI270732v1_random 37475 1 + 41543 -T s panTro5.chr20 36384737 1 - 66533130 -T i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 88404 1 + 12760026 -T i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260277 1 + 20583478 -T i ponAbe2.chr3_random C 0 I 2 s nomLeu3.chrUn_GL398098_1 7655 1 - 27701 -T i nomLeu3.chrUn_GL398098_1 C 0 C 0 s calJac3.chr21 32801991 1 - 50472720 A- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11013098 1 - 13128814 A- i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7754363 1 + 14377064 A- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4215692 1 - 9889416 A- i aotNan1.NW_018487195v1 C 0 C 0 e otoGar3.GL873528 20838914 0 + 38779656 C e colAng1.NW_012123820v1 176130 1 - 10971483 I e manLeu1.NW_012099043v1 276838 2 - 785044 I e chlSab2.chr22 156918 0 - 101219884 C e cerAty1.NW_012001605v1 266234 2 - 6739814 I e macNem1.NW_012010856v1 284856 14 - 11645122 I e rheMac8.chr2 204364599 14 - 204787373 I e macFas5.chr2 266413 14 - 192460366 I e canFam3.chr31 28874923 8 - 39895921 I e panPan2.chr3 77928233 0 + 205426864 C a score=619085.000000 s hg38.chr22_KI270732v1_random 37476 106 + 41543 AGAGTTGTTTATTTCTCTGGTAATGTGTAGAGTTATTACAATGCAGCATGACAACTGTTTCTCTGTAATAGTGATCCAACATGACGTGTAGTATTACACAGGGTTG s gorGor5.CYUI01015020v1 88405 103 + 12760026 AGAGTTGTTTATTTCTCTGGTAATGTGTAGA-TTACTAAAATGCAGCAT-ACAACTGTTTCTCTGTAATAGTGATCCAACATGAC-TGTAGTATTACACAGGGTTG i gorGor5.CYUI01015020v1 C 0 C 0 s rheMac8.chr2 204364613 105 - 204787373 AGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACAACTG-TTCTCTGTAATAGTGATCCTACATGACACGTCGTATTACACAGGGCTG i rheMac8.chr2 I 14 C 0 s macFas5.chr2 266427 105 - 192460366 AGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACAACTG-TTCTCTGTAATAGTGATCCTACATGACACGTCGTATTACACAGGGCTG i macFas5.chr2 I 14 C 0 s macNem1.NW_012010856v1 284870 105 - 11645122 AGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACAACTG-TTCTCTGTAATAGTGATCCTACATGACACGTCGTGTTACACAGGGCTG i macNem1.NW_012010856v1 I 14 C 0 s cerAty1.NW_012001605v1 266236 105 - 6739814 AGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACAACTG-TTCTTTGTAATAGTGATCCAGCATGACACGTGGTATTACACAGGGCTG i cerAty1.NW_012001605v1 I 2 C 0 s manLeu1.NW_012099043v1 276840 105 - 785044 AGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACAACTG-TTCTCTGTAATAGTGATCCTACATGACACGTGGTATTACACAGGGCTG i manLeu1.NW_012099043v1 I 2 C 0 s colAng1.NW_012123820v1 176131 105 - 10971483 AGAGTTGTTTATTTCTCTGGCAATATGTCGAGTTACTAAAATGCAGCATGACAACTG-TTCTCTGTAATAGTGATCCAACATGACACGTCGTATTACACAGGGCTG i colAng1.NW_012123820v1 I 1 T 155 s calJac3.chr21 32801992 105 - 50472720 AGAGTTCTTTATTTCTCTGGCAATGTGTAGGATTATTAAAATGCAGCATAAAAACTGTTTCTCTGTAATAGTGATCCAACATGACATGTAACATTACACA-GGTTG i calJac3.chr21 C 0 T 155 s saiBol1.JH378168 11013099 105 - 13128814 AGAGTTGTTTATTTCTCTGGCAATGTGTAGGATTACTAAAATGCAGCATGACAACTGTTTCTCTGTAATAGTGATCCAACATGACATGTAGCATTACACA-GGTTG i saiBol1.JH378168 C 0 T 155 s cebCap1.NW_016107322v1 7754364 105 + 14377064 AGAGTTGTTTATTTCTCTGGCAATGTGTAGGATTACTAAAATGCAGCATGACAACTGTTTCTCTGTAATAGTGATCCAACATGACATGTAGCATTACACA-GGTTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4215693 105 - 9889416 AGAGTTGTTTATTTCTCTGGCAATGTGTAGGATTACTAAAATGCAGCACAACAACTGTTTCTCTGTAATAGTGATCCAACATGACATGTAGCATTACGCA-GGTTG i aotNan1.NW_018487195v1 C 0 T 155 s canFam3.chr31 28874931 106 - 39895921 AGAGTTGTTTATTCCTCTGGCAACGTGTCAGATCACTAAAATGCAGCAGGACAACTGTTTTTCTGCAATAGTGATCCAACAGTACATTTAGTATTACACAAGATTG i canFam3.chr31 I 8 C 0 e ponAbe2.chr3_random 20260278 2 + 20583478 I e otoGar3.GL873528 20838914 0 + 38779656 C e chlSab2.chr22 156918 0 - 101219884 C e panTro5.chr20 36384738 0 - 66533130 C e nomLeu3.chrUn_GL398098_1 7656 0 - 27701 C e panPan2.chr3 77928233 0 + 205426864 C a score=15795.000000 s hg38.chr22_KI270732v1_random 37582 2 + 41543 CT s panPan2.chr3 77928233 2 + 205426864 CT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88508 2 + 12760026 CT i gorGor5.CYUI01015020v1 C 0 C 0 s rheMac8.chr2 204364718 2 - 204787373 CT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 266532 2 - 192460366 CT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 284975 2 - 11645122 CT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 266341 2 - 6739814 CT i cerAty1.NW_012001605v1 C 0 T 155 s manLeu1.NW_012099043v1 276945 2 - 785044 CT i manLeu1.NW_012099043v1 C 0 T 155 s colAng1.NW_012123820v1 176081 2 - 10971483 CT i colAng1.NW_012123820v1 T 155 C 0 s calJac3.chr21 32801942 2 - 50472720 CT i calJac3.chr21 T 155 C 0 s saiBol1.JH378168 11013049 2 - 13128814 CT i saiBol1.JH378168 T 155 C 0 s cebCap1.NW_016107322v1 7754469 2 + 14377064 CT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4215643 2 - 9889416 CT i aotNan1.NW_018487195v1 T 155 C 0 s canFam3.chr31 28875037 2 - 39895921 CC i canFam3.chr31 C 0 C 0 e ponAbe2.chr3_random 20260278 2 + 20583478 I e otoGar3.GL873528 20838914 0 + 38779656 C e chlSab2.chr22 156918 0 - 101219884 C e panTro5.chr20 36384738 0 - 66533130 C e nomLeu3.chrUn_GL398098_1 7656 0 - 27701 C a score=35379.000000 s hg38.chr22_KI270732v1_random 37584 5 + 41543 AAAAC s panPan2.chr3 77928235 5 + 205426864 AAAAC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88510 5 + 12760026 AAAAC i gorGor5.CYUI01015020v1 C 0 C 0 s rheMac8.chr2 204364720 5 - 204787373 GAAAC i rheMac8.chr2 C 0 T 126 s macFas5.chr2 266534 5 - 192460366 GAAAC i macFas5.chr2 C 0 T 126 s macNem1.NW_012010856v1 284977 5 - 11645122 GAAAC i macNem1.NW_012010856v1 C 0 T 126 s cerAty1.NW_012001605v1 266188 4 - 6739814 -AAAC i cerAty1.NW_012001605v1 T 155 I 1 s manLeu1.NW_012099043v1 276792 4 - 785044 -AAAC i manLeu1.NW_012099043v1 T 155 I 1 s colAng1.NW_012123820v1 176083 5 - 10971483 AAAAC i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32801944 5 - 50472720 AAAAC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11013051 5 - 13128814 GAAAC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7754471 5 + 14377064 AAAAC i cebCap1.NW_016107322v1 C 0 T 126 s aotNan1.NW_018487195v1 4215645 5 - 9889416 AAAAC i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 28875039 5 - 39895921 AAAAC i canFam3.chr31 C 0 T 121 e ponAbe2.chr3_random 20260278 2 + 20583478 I e otoGar3.GL873528 20838914 0 + 38779656 C e chlSab2.chr22 156918 0 - 101219884 C e panTro5.chr20 36384738 0 - 66533130 C e nomLeu3.chrUn_GL398098_1 7656 0 - 27701 C a score=53860.000000 s hg38.chr22_KI270732v1_random 37589 21 + 41543 AAGAATATGTAGACAGTAGCT s panPan2.chr3 77928240 21 + 205426864 AAGAATATGTAGACAGTAGCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88515 18 + 12760026 AAGAATATGTAGACAG--GC- i gorGor5.CYUI01015020v1 C 0 C 0 s cerAty1.NW_012001605v1 266193 21 - 6739814 AAGAATATATAGACAGTAGCT i cerAty1.NW_012001605v1 I 1 C 0 s manLeu1.NW_012099043v1 276797 21 - 785044 AAGAATATGTAGACAGTAGCT i manLeu1.NW_012099043v1 I 1 C 0 s colAng1.NW_012123820v1 176088 21 - 10971483 AAGAATATGTAGACAGTAGCT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32801949 21 - 50472720 AAGAATATGTAGACAATACCT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11013056 21 - 13128814 AAGAATATGTAGACAGTACCT i saiBol1.JH378168 C 0 C 0 s aotNan1.NW_018487195v1 4215650 21 - 9889416 AAGAATATGTAGACAGTAGGT i aotNan1.NW_018487195v1 C 0 C 0 e ponAbe2.chr3_random 20260278 2 + 20583478 I e cebCap1.NW_016107322v1 7754476 126 + 14377064 T e otoGar3.GL873528 20838914 0 + 38779656 C e chlSab2.chr22 156918 0 - 101219884 C e macNem1.NW_012010856v1 284982 126 - 11645122 T e rheMac8.chr2 204364725 126 - 204787373 T e macFas5.chr2 266539 126 - 192460366 T e canFam3.chr31 28875044 121 - 39895921 T e panTro5.chr20 36384738 0 - 66533130 C e nomLeu3.chrUn_GL398098_1 7656 0 - 27701 C a score=20235.000000 s hg38.chr22_KI270732v1_random 37610 8 + 41543 ACATTGGG s panPan2.chr3 77928261 8 + 205426864 GCGTTGGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88533 7 + 12760026 -CGTTGGG i gorGor5.CYUI01015020v1 C 0 C 0 s cerAty1.NW_012001605v1 266214 8 - 6739814 ACGTTGGA i cerAty1.NW_012001605v1 C 0 C 0 s manLeu1.NW_012099043v1 276818 8 - 785044 ACGTTGGA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 176109 8 - 10971483 ACATTGGA i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32801970 8 - 50472720 ACACTGGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11013077 8 - 13128814 ACACTGGA i saiBol1.JH378168 C 0 C 0 s aotNan1.NW_018487195v1 4215671 8 - 9889416 ACATTGGA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20838914 7 + 38779656 ACATTGG- i otoGar3.GL873528 C 0 C 0 e ponAbe2.chr3_random 20260278 2 + 20583478 I e cebCap1.NW_016107322v1 7754476 126 + 14377064 T e chlSab2.chr22 156918 0 - 101219884 C e macNem1.NW_012010856v1 284982 126 - 11645122 T e rheMac8.chr2 204364725 126 - 204787373 T e macFas5.chr2 266539 126 - 192460366 T e canFam3.chr31 28875044 121 - 39895921 T e panTro5.chr20 36384738 0 - 66533130 C e nomLeu3.chrUn_GL398098_1 7656 0 - 27701 C a score=51324.000000 s hg38.chr22_KI270732v1_random 37618 6 + 41543 TTTCTG s panPan2.chr3 77928269 6 + 205426864 TTTCTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88540 6 + 12760026 TTTCTG i gorGor5.CYUI01015020v1 C 0 C 0 s rheMac8.chr2 204364599 6 - 204787373 TTTCTG i rheMac8.chr2 T 126 C 0 s macFas5.chr2 266413 6 - 192460366 TTTCTG i macFas5.chr2 T 126 C 0 s macNem1.NW_012010856v1 284856 6 - 11645122 TTTCTG i macNem1.NW_012010856v1 T 126 C 0 s cerAty1.NW_012001605v1 266222 6 - 6739814 TTTCTG i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 156918 6 - 101219884 TTTCTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 276826 6 - 785044 TTTCTG i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 176117 6 - 10971483 TTTCTG i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32801978 6 - 50472720 TTTCTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11013085 6 - 13128814 TTTCTG i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7754350 6 + 14377064 TTTCTG i cebCap1.NW_016107322v1 T 126 C 0 s aotNan1.NW_018487195v1 4215679 6 - 9889416 TTTCTG i aotNan1.NW_018487195v1 C 0 C 0 e ponAbe2.chr3_random 20260278 2 + 20583478 I e otoGar3.GL873528 20838921 0 + 38779656 C e canFam3.chr31 28875044 121 - 39895921 T e panTro5.chr20 36384738 0 - 66533130 C e nomLeu3.chrUn_GL398098_1 7656 0 - 27701 C a score=34371.000000 s hg38.chr22_KI270732v1_random 37624 7 + 41543 TGGCTAC s panPan2.chr3 77928275 7 + 205426864 TGGCTGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88546 7 + 12760026 TGGCTAT i gorGor5.CYUI01015020v1 C 0 C 0 s rheMac8.chr2 204364605 7 - 204787373 TGGTTAG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 266419 7 - 192460366 TGGTTAG i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 284862 7 - 11645122 TGGTTAG i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 266228 7 - 6739814 TGGTTAG i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 156924 7 - 101219884 TGGTTAG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 276832 7 - 785044 TGGTTAG i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 176123 7 - 10971483 TGGTTAA i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32801984 7 - 50472720 TGGGTGA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11013091 7 - 13128814 TGGGTAA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7754356 7 + 14377064 TGGGTAA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4215685 7 - 9889416 TGGGTAA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20838921 4 + 38779656 --CTTA- i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28874923 7 - 39895921 TGGCTAA i canFam3.chr31 T 121 C 0 e ponAbe2.chr3_random 20260278 2 + 20583478 I e panTro5.chr20 36384738 0 - 66533130 C e nomLeu3.chrUn_GL398098_1 7656 0 - 27701 C a score=891271.000000 s hg38.chr22_KI270732v1_random 37631 70 + 41543 AAGAGTTGTTCATTTCTCTGGTAATGTGTAGAATTACTAAAATGCAGCATGACA--ACTG--------------TTTCTCTGTAAT s panTro5.chr20 36384738 70 - 66533130 AAGAGTTGTTTATTTCTCTGGTGATGTGTAGAATTGCTAAAATGCAGCATGACA--ACTC--------------TTTCTCTGTAAC i panTro5.chr20 C 0 C 0 s panPan2.chr3 77928282 70 + 205426864 AAGAGTTGTTTATTTCTCAGGTGATGTGTAGAATTACTAAAATGCAGCATCACA--ACTG--------------TTTCTCTGTAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88553 67 + 12760026 --GAGTTGTTTATTTCTCTGGTAATGTGTAG-ATTACTAAAATGCAGCATGACA--ACTG--------------TTTCTCTGTAAT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260280 70 + 20583478 AAGAGTTGTTTATTTCTCTGGCAATATGTAGAATTACTAAAATGCAGCATTACA--ACTC--------------TTTCTCTGTAAC i ponAbe2.chr3_random I 2 C 0 s nomLeu3.chrUn_GL398098_1 7656 70 - 27701 AAGAGTTGTCTATTTCTCTGGTAATGTGTAGAATTACTAAAATGCAGCATGACA--ACTG--------------TTTCTCTGTAAT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204364612 69 - 204787373 AAGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACA--ACTG---------------TTCTCTGTAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 266426 69 - 192460366 AAGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACA--ACTG---------------TTCTCTGTAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 284869 69 - 11645122 AAGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACA--ACTG---------------TTCTCTGTAAT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 266235 69 - 6739814 AAGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACA--ACTG---------------TTCTTTGTAAT i cerAty1.NW_012001605v1 C 0 I 65 s chlSab2.chr22 156931 71 - 101219884 AAGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACAACACTG---------------TTCTCTGGAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 276839 69 - 785044 AAGAGTTGTTTATTTCTCTGGCAATATGTAGAGTTACTAAAATGCAGCATGACA--ACTG---------------TTCTCTGTAAT i manLeu1.NW_012099043v1 C 0 I 65 s colAng1.NW_012123820v1 176130 69 - 10971483 AAGAGTTGTTTATTTCTCTGGCAATATGTCGAGTTACTAAAATGCAGCATGACA--ACTG---------------TTCTCTGTAAT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32801991 70 - 50472720 AAGAGTTCTTTATTTCTCTGGCAATGTGTAGGATTATTAAAATGCAGCATAAAA--ACTG--------------TTTCTCTGTAAT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11013098 70 - 13128814 AAGAGTTGTTTATTTCTCTGGCAATGTGTAGGATTACTAAAATGCAGCATGACA--ACTG--------------TTTCTCTGTAAT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7754363 70 + 14377064 AAGAGTTGTTTATTTCTCTGGCAATGTGTAGGATTACTAAAATGCAGCATGACA--ACTG--------------TTTCTCTGTAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4215692 70 - 9889416 AAGAGTTGTTTATTTCTCTGGCAATGTGTAGGATTACTAAAATGCAGCACAACA--ACTG--------------TTTCTCTGTAAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20838925 83 + 38779656 GAGAATTGTTTATTCCTCT-GCAATGTGTGGGATTACTAAAATGCAGCGTGACA--ACAGATTTTTTTTTTCCTTTTTTTGGCAAT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28874930 70 - 39895921 AAGAGTTGTTTATTCCTCTGGCAACGTGTCAGATCACTAAAATGCAGCAGGACA--ACTG--------------TTTTTCTGCAAT i canFam3.chr31 C 0 C 0 a score=2148904.000000 s hg38.chr22_KI270732v1_random 37701 185 + 41543 AGTGATCCAACATGACGTGTAGTATTACACAGGGTTGATAAAACC-TTCCTCTGACCATCATTTCCAGTAATTGTGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTGA-AAAAAATAGGTATCTTCTCTCTTATTTACCCAAAAAACCCTT--TTATTTACTCAGTATTGATTG s panTro5.chr20 36384808 182 - 66533130 AGTGATCCAACATGACATGTAGTATTACACAGGGTTGCTAAAACC-TTCCTCTGACCATCATTTCCAGTAATCGTGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTAA-GAAAAATAGGTATCTTCTCTCTTATTTACCCAAA---CCCTT--TTATTTACTCAGTATTGATTG i panTro5.chr20 C 0 C 0 s panPan2.chr3 77928352 182 + 205426864 AGTGATCCAACGTGACATGTAGTATCACACAGGGTTGCTAAAACC-TTCCTCTGACCATCATTTCCAGTAATTGTGGCTTGTTTTA--GATGAGGAATAAGTTACTAGATATTTAAAATATTTGA-GAAAAATAGGTATCTTCTCTCTTATTTACCCAAA---CCCTT--TTATTTACTCAATATTGATTG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88620 179 + 12760026 AGTGATCCAACATGACGT---GTATTACACAGGGTTGCTAAAACC-TTCCTCTGACCATCATTTCCAGTAATTGTGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTGA-GAAAAATAGGTATCTTCTCTCTTATTTACCCAAA---CCCTT--TTATTTACTCAGTATTGATTG i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260350 181 + 20583478 AGTGATCCAACATGACATGTAGTATTACACAGAGTTGCTAAAACC-TTCCTCTGACCATCATTTCCAGTAATTGTGGCTTGTTTTC--AATGAGGAATAGGTTACTAGATATTTAAAATATTTGA-GAAAAATAGGTATCTTCTCTCTTATTTACCCAAA---CCC-T--TTATTTACTCAATATTGATAG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 7726 182 - 27701 AGTGATCCAACATGACATGTAGTATTACACAGGGTTGCTAAAACC-TTCCTCTGACCATCATTTCCAGTAATTGTGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTGA-GAAAAATAGGTATCTTCTCTCTTATTTACCCAAA---CCCTT--TTATTTACTCAATATTGATGG i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204364681 180 - 204787373 AGTGATCCTACATGACACGTCGTATTACACAGGGCTGCTGAAACC-TTCCTCTGACCATCATTTCCAGTAAT--TGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTGA-GAAAAATAGGTTTCTTCTCTCTTATTTACCCGAA---CACTT--TTATTTCCTCAATATTGATTG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 266495 180 - 192460366 AGTGATCCTACATGACACGTCGTATTACACAGGGCTGCTGAAACC-TTCCTCTGACCATCATTTCCAGTAAT--TGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTGA-GAAAAATAGGTTTCTTCTCTCTTATTTACCCGAA---CACTT--TTATTTCCTCAATATTGATTG i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 284938 180 - 11645122 AGTGATCCTACATGACACGTCGTGTTACACAGGGCTGCTGAAACC-TTCCTCTGACCATCATTTCCAGTAAT--TGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTGA-GAAAAATAGGTTTCTTCTCTCTTATTTACCCGAA---CACTT--TTATTTCCTCAATATTGATTG i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 266369 180 - 6739814 AGTGATCCAGCATGACACGTGGTATTACACAGGGCTGCTGAGACC-TTCCTCTGACCATCATTTCCAGTAAT--TGGCTTGTTTTA--GATGAGGAATAGGTTATCAGATATTTAAAATATTTGA-GAAAAATAGGTTTCTTCTCTCTTATTTACCCGAA---CACTT--TTATTTCCTCAATGTTGATTG i cerAty1.NW_012001605v1 I 65 C 0 s chlSab2.chr22 157002 179 - 101219884 GGTGACCCCACATGACACGTGGTATTACACAGGGCTGCTGAAACC--TCCTCTGACCATCACTTCCAGTAGT--TGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTGAAATATTTGA-GAAAAATTGGTTTCTTCTCTCTTATTTACCCAAA---CACTT--TTATTTCCTCAATATTGATTG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 276973 180 - 785044 AGTGATCCAGCATGACACGTGGTATTACACAGGGCTGCCGAAACC-TTCCTCTGACCATCATTTCCAGTAAT--TGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTGA-GAAAAATAGGTTTCTTCTCTCTTATTTACCCGAA---CACTT--TTATTTCCTCAATGTTGATTG i manLeu1.NW_012099043v1 I 65 C 0 s colAng1.NW_012123820v1 176199 180 - 10971483 AGTGATCCAACATGACACGTCGTATTACACAGGGCTGCTAAAGCC-TTCCTCTGACCATCATTTCCAGTCAT--TGGCTTGTTTTA--GATGAGGAATAGGTTATTAGATATTTAAAATATTTGA-GAAAAGTAGGTTTCTTCTCTCTTATTTACCCAAA---CCCTT--TTATTTCCTCAATATTGATTG i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32802061 180 - 50472720 AGTGATCCAACATGACATGTAACATTACACAG-GTTGTGAAAACC-TTCCTCTGATCATCATTTCCAATAACTGTAGCTTGTTTTA--GATGAGTAACAAGATATTATATATTTAAAATACTTGA-GAAAAGTAGGTATCTTCTCTCTTATTTATTTAAA---CCCTT--TTA-TTACTCAATATTGATTG i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11013168 181 - 13128814 AGTGATCCAACATGACATGTAGCATTACACAG-GTTGCTAAAACC-TTCCTCTGATCATCGTTTTCAGTAATTGTGGCTTGTTTTA--GATGAGTAATAAGATATTAGATATTTAAAATACTTGA-GAAAAGTAGGTATATTTTCTCTTATGTACCCAAA---CCCTT--TTATTTACTCAATATTGATTG i saiBol1.JH378168 C 0 M 1522 s cebCap1.NW_016107322v1 7754433 181 + 14377064 AGTGATCCAACATGACATGTAGCATTACACAG-GTTGCTAAAACC-TTCCTCTCATCATCATTTCCAGTAATTGTGGCTTGTTTTA--GATGAGTAATAAGATATTAGATATTTAAAATACTTGA-GAAAAGTAGGTATATTCTCTCTTATTTACCCAAC---CCCTT--TTATTTACTCAATATTGATTG i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4215762 181 - 9889416 AGTGATCCAACATGACATGTAGCATTACGCAG-GTTGCTAAAACC-TTCCTCTGATCATCATTTCCAGTAATTGTGGTTTGTTTTA--GATGAGTAATAAGATATTAGATATTTAAAATACTTGA-GAAAAGTAGGTATCTTCTCTCTTATTTACCCAAA---CCCTT--TTATTTATTCAATATTAATTA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20839008 141 + 38779656 TGTGATCTAACAGGCCATGTAGTACCACACAG--------------------------------------------GATTGTTCTA--GGTGGGTAATAGCATATTAGATATTTAAAATATTTGA-TAAACGTAAGTATCTTATCTCTTACTTGTCCAAA---CCCTTTATTCTTTCCGCAATATTGATTG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28875000 188 - 39895921 AGTGATCCAACAGTACATTTAGTATTACACAAGATTGCCAAAACCCTTTCTGAGGCCATCATTTCCAGGGATTATGGCTTTTTTTCTTAATGAGTAATAGTTTGTTGAATATTTAAAATGTTAGAGGAAAAATAAATATCATTTCTTTTATTTGTTCACA---CCCTTTATTCTTTCTTCAATATTGATTC i canFam3.chr31 C 0 C 0 a score=7295957.000000 s hg38.chr22_KI270732v1_random 37886 664 + 41543 CTCAAATATTCTATCCTTCACTGGGGACCATCATTTATT--AAAAAATGGCCTGAAATCAATTCCAAGTCTA-GCTGCAGTGAAGCTTCTAGTGGGAAATGCAAGTTAAGTAATTTGTTTTCTTTCTAAAAGGATAAATTAAAATAGACAATGATTCAAAGAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATATTATCATTCAGGGAA-TTTTGCTTCCTTTGTGGTAGCTAGATTGAGTGAAGGAGATTGCTTAGGTGTAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCATCATTTAGATCAATAAGCCTCattaaat------------attaaatattac-catttaacttttatgcaattaagcagaatttaaaaataaaagtttt-aaaaattaaagtttttattactaagta-tCTTTTAAAATACAAATCTCATAGCTCATTATTATTGTCAAGA-AAAGAATACATGAAA-ATTTATAAATAAGG-------TTTTCTCTCTAGTAAGTTTACAGTCTTGCATTAAATATTGGTTATTGGAACCCGCAATGTC----CAAGATTATGATTAAGTATCAATGAAGTATGACTCTTGCGGCAAATATGCATGC-AAATGTTATAAGATTATTTTCACATTATTTCACATAATTTCTTAAGCGT-AAT s panTro5.chr20 36384990 663 - 66533130 CTCAAATATTCTATCCTTCACTGGGGACCATCATTTATT--AAAAAATGGCCTGAAATCAATTCCAAGTCTA-GCTGCAGTGAAGCTTCGAGGGGGAAATGCAAGTTAAGTAATTTGTTTTCTTTCTAAAAGGATAAATTAAAATAGACAATGATTCAAAGAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATATTATGATTCAGGGAA-TTTTGCTTCCTTTATGGTAGCTAGATTGAGTGAAGGAGATTGCTTTGGTATAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCATCATTTAGATCAATAAGCCTCATTAA-T------------ATTAAATATTAC-CTTTTAACTTTCATGCAATTAAGCAGAATTTAAAAATAAAAGTTTT-AAAAATTAAAGTTTTTATTACTAAGTA-TCTTTTAAAATACAAATCTCATAGCTCATTATTATTGTCAAGA-AAAGAATACATGAAG-ATTTATAAATAAGG-------TTTTCTCTCTATTAAGTTTACAGTCTTGCATTAAATATTGGTTACTGGAACCCGCAATGTC----CAAGATTATGATTAAGTATCAATGAAATATGACTCTTGTAGCAAATAAGCATAC-AAATGTTATAAGATTATTTTCACATTATTTCACATAATTTCTTAAGCGT-AGT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77928534 664 + 205426864 CTCAAATATTCTATCCTTCATTGGGGACCATCATTTATT--AAAAAACGGCCTGAAATCAATTCCAAGTCTA-GCTGTAGTGAAGCTTCTAGTGGGAAATGCAAGTTAAGTAATTTGTTTTCTTTCTAAAAGGATAAATTAAAATAGACAATGATTCAAAGAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATATTATGATTCAGGCAA-TTTTGCTTCCTTTGTGGTAGCTAGATTGAGTGAAGGAGATTGCTTAGGTATAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCATCATTTAGATCAATAAGCCTCattaaac------------attaaatattac-cttttaacttttatgcaattaagcagaatttaaaaataaaagtttt-aaaaattaaagtttttattactaaata-tCTTTTAAAATACAAATCTCATAGCTCCTTATTATTGTCAAGA-AAAGAATACATTAAA-ATTTATAAATAAGG-------TTTTCTCTCTATTAAGTTTACAATCTTGCATTAAATGTTGGTTATTGTGACCCGCAATGTC----CAAGATTATGATTAAGTATCAGTGAAGTGTGACTCCTGCAGCAAATATGCATGC-AAATGTTATAAGATTATTTTCACATTATTTCACATAATTTCTTAAGCAT-AAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 88799 658 + 12760026 CTCAAATATTCTATCCTTCACTGGGGACCATCATTTATT--AAAAAATGGCCTGAAATCAATTCCAAGTCTA-GCTGCAGTGAAGCTTCTAGTGGGAAATGCAAGTTAAGTAATTTGTTTTCTTTCTAAAAGGATAAATTAAAATAGACAATGATTCAAAGAACAAAACAACTTAATAGAAAACAT-ATGGAATGCTTTGATATTATGATTCAGGGAA--TTTGCTTCCTTTGTGGTAGCTAGATTGAGTGAAGGAGATTGCTTAGGTATAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCATCATTTAGATCAATAAGCCTCattaaat------------attaaatattac-cttttaacttttatgcaattaagcagaa-ttaaaaataaaagtttt-aaaaattaaagtttttattactaa-ta-tCTTTTAAAATACAAATCTCATAGCTCATTATTATTGTCAAGA-AAAG-ATACATGAAA-ATTTATAAATAAGG-------TTTTCTCTCTATTAAGTTTACAGTCTTGCATTAAATATTGGTTATTGGAACCCACAATGT-----CAAGATTATGATTAAGTATCAATGAAGTATGACTCTTGCAGCAAATATGCATGC-AAATGTTATAAGATTATTTTCACATTATTTCACATAATTTCTTAAGCAT-AAT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20260531 663 + 20583478 CTTAAATATTCTATCCTTCATTGGGGACCATCATTTATT--AAAAAATGGCCTGAAATCAATTCCAAGTCTA-GCTGCAGTGAAGCTTCTAGTGGGAAATGCAAGTTAAGTAATTTGTTTTCTTTCTAAAAGGATAAATTAAAATAGACAATAATTCAAAGAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATATTATGATTCAGGGAA-TTTTGCTTCCTTTGTGGTAGCTAGATTGAGTGAAGGAGATTGCTTAGGTATAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCGTATCATCATTTAGATCAATAAGCCTCATTAAAT------------ATTAAATATTAC-C-TTTAACTTTTATGCAATTAAGCAGaatttaaaaataaaagtttt-aaaaattaaagtttttattaCTAAGTA-TCTTTTAAAATACAAATCTCATAGCTCATTATTATTGTCAAGA-AAAGAATACATGAAA-ATGTATAAATAAGG-------TTTTCTCTCTATTAAGTTTACAGTCTTGCGTTAAATATTGGTTATTGGGACCCGCAATGTC----CAAGATTATGATTAAGTATCGATGAAGTGTGATTCCTGCAGCAAATATGCGTGC-AAATGTTATAAGATTATTTTCACATTATTTCACATAATTTCTTAAGCAT-AAT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 7908 661 - 27701 CTCAAGTATTCTATCTTTCACTAGGGACCATCATTTATT--AAAAAATGGCCTGAAATCAATTCCAAGTCTG-GCTGTTGTGAAGCTTCTAGTGGGAAATGCAAGTTAAGTAATTTGTTTTCTTTCTAAAAGGATAAATTAAAATAGACAATGATTCAAACAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATATTATGATTCAGGGAA-TTTTGCTTCCTTAGTGGTAGCTAGATTGAGTGATGGAGATTGCTGAGGTATAATGAGCAAATCTTATCATTGCAAGTATAATCCAAGCTGCATATCATCATTTAGCTCAATAGGCCTCAttaaat------------cttaagttttac-cttttaacttttatgcaattaagcagaatttaaaaattaaagtttt-aaaaattaaagtttttattactaagtA-TCTTTTAAAATACAAATCTCACAGCTCC---TTATTGTCAAGA-AAAGAACACATGAAA-ATTTATAAATAAGG-------TTTTCTCTCTATTAAGTTTACAGTCTTGCATTAAATATTGGTTATTGGGACCCACCATGTC----CAAGATTCTGATTAAGTATCAATGAAGAATGACTCTTGCAGCAAATATGCATGC-AAATGTTATAAGATTATTTTCACATTATTTCACATAATTTCTTAAACAT-AAT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204364861 664 - 204787373 ATCAAATATTCTATCCTTCATTGGGGACCATCATTTATTAAAAAAAATGGCCTGAAATCAATTCCAAGCCTA-GCTGTAGTGAAGCTTCTAGTGGTAAATGCAAGTTAAGTAATTTGTTTTCTTTCT-AAAGGATAAATTAAAATAGACTATGATTCAAAAAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATACTATGATTCAGGGAA-CTTTGCTTCCCTTGTGGTAGCTAGAATGAGTGAAGGAGATTGCTTAGGTGTAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCGTCATTTAGATCAATAAGCCTCATTAAAT------------ATTAAATATTAC-CTTTTAACTTTTATGCAATTAAGCAGATTTTAAAAATAAAAGTTTTAAAAAATTAAAGTTTTTATTACTAAGTA-TTTTT--AAATGCAAATCTCATAGCTCCTTATTATTGTCAAGA-AAAGAATACATTAAA-ATTTATAAATAAGG-------TTTTCTCTCTATGAAGTTTAAAATCTTGCATTAAATATTGGTTATTGGGACTCACAATGTC----CAAGATTATGATTAAGTATCAATGAAGTGTGACTCTTGCAGCAAACATGCATGC-AAATGTTATAAGATTATTTTCACATGATTTCACATAATTTCTTAAGCAT-AAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 266675 664 - 192460366 ATCAAATATTCTATCCTTCATTGGGGACCATCATTTATTAAAAAAAATGGCCTGAAATCAATTCCAAGCCTA-GCTGTAGTGAAGCTTCTAGTGGTAAATGCAAGTTAAGTAATTTGTTTTCTTTCT-AAAGGATAAATTAAAATAGACTATGATTCAAAGAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATACTATGATGCAGGGAA-CTTTGCTTCCCTTGTGGTAGCTAGAATGAGTGAAGGAGATTGCTTAGGTGTAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCGTCATTTAGATCAATAAGCCTCATTAAAT------------ATTAAATATTAC-CTTTTAACTTTTATGCAATTAAGCAGATTTTAAAAATAAAAGTTTTAAAAAATTAAAGTTTTTATTACTAAGTA-TTTTT--AAATGCAAATCTCATAGCTCCTTATTATTGTCAAGA-AAAGAATACATTAAA-ATTTATAAATAAGG-------TTTTCTCTCTATGAAGTTTAAAATCTTGCATTAAATATTGGTTATTGGGACTCACAATGTC----CAAGATTATGATTAAGTATCAATGAAGTGTGACTCTTGCAGCAAACATGCATGC-AAATGTTATAAGATTATTTTCACATGATTTCACATAATTTCTTAAGCAT-AAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 285118 664 - 11645122 ATCAAATATTCTATCCTTCATTGGGGACCATCATTTATTAAAAAAAATGGCCTGAAATCAATTCCAAGCCTA-GCTGTAGTGAAGCTTCTAGTGGTAAATGCAAGTTAAGTAATTTGTTTTCTTTCT-AAAGGATAAATTAAAATAGACTATGATTCAAAGAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATACTATGATTCAGGGAA-CTTTGCTTCCCTTGTGGTAGCTAGAATGAGTGAAGGAGATTGCTTAGGTGTAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCGTCATTTAGATCAATAAGCCTCATTAAAT------------ATTAAATATTAC-CTTTTAACTTTTATGCAATTAAGCAGATTTTAAAAATAAAAGTTTTAAAAAATTAAAGTTTTTATTACTAAGTA-TTTTT--AAATGCAAATCTCATAGCTCCTTATTATTGTCAAGA-AAAGAATACATTAAA-ATTTATAAATAAGG-------TTTTCTCTCTATGAAGTTTAAAATCTTGCATTAAATATTGGTTATTGGGACTCACAATGTC----CAAGATTATGATTAAGTATCAATGAAGTGTGACTCTTGCAGCAAACATGCATGC-AAATGTTATAAGATTATTTTCACATGATTTCACATAATTTCTTAAGCAT-AAT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 266549 665 - 6739814 ATCAAATATTCTATCCTTCATTGGGGACCATGATTTATTAAAAAAAATGACCTGAAATCAATTCCAAGCCTA-GCTGTAGTGAAGCTTCTAGTGGTAAATGCAAGTTAAGTAATTTGTTTTCTTTCT-AAAGGATAAATTAAAATAGACTATGATTCAAAGAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATATTATGATTCAGGGAA-CTTTGCTTCCCTTGTGGTAGCTAGATTGAGTGAAGGAGATTGCTTAGGTGTAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCGTCATTTAGATCAATAAACCTCattaaat------------attaaatattac-cttttaacttttatgcaattaagcagaatttaaaaataaaagttttaaaaaattaaagtttttattactaagtattTTTT--AAATGCAAATCTCATAGCTCCTTATTATTGTCAAGA-AAAGAATACATTAAA-ATTTATAAATAAGG-------TTTTCTCTCTATGAAGTTTAAAATCTTGCATTAAATATTGGTTATTGGGACTCACAATGTC----CAAGATTATGATTAAGTATCAATGAAGTGTGACTCTTGCAGCAAACATGCATGC-AAATGTTATAAGATTATTTTCACATGATTTCACATAATTTCTTAAGCAT-AAT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 157181 665 - 101219884 ATCAAATATTCTATCCTTCATTGGGGACCATCATTTATTAAAAAAAATGGCCTGAAATCAATTCCAAGCCTA-GCTGTAGTGAAGCTTCTAGTGGTAAATGCAAGTTAAGTAATTTGTTTTCTTTCTAAAAGGATAAATTAAAATAGACTATGATTCAGAGAACAAAACAACTTAATAGAAAACGTAATGGAATGCTTTGATACTATGATTCAGGGAA-CTTTGCTTCCCCTGTGGTAACTAGATTGAGTGAAGAGGATTGCTTAGGTGTAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCGTCATTTAGATCAATAAGCCTCATTAAAT------------ATTGAATATTAC-CTTTTAACTTTTATGCAATTAAGCAGAATTTAAAAATAAAAGTTTTAAAAAATTAAAGTTTTTATTACTAAGTA-TTTTT--AAATGCAAATGTCATAGCTCCTTATTATTGTCAAGA-AAAGAATACATTAAA-ATTTATAAATAAGG-------TTTTCTCTCTGTGAAGTTTAAAATCTTGCATTAAATATTGGTTATTGGGACTCACAATGTC----CAAGATTATGATTAAGTATCAATGAAGTGTGACTCTTGCAGCAAATATGCATGC-AAATGTTATAAGATTATTTTCACATGATTTCACATAATTTCTTAAGCAT-AAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 277153 663 - 785044 ATCAAATATTCTATCCTTCATTGGAGACCATCATTTATTTAAAAAAATGGCCTGAAATCAATTCCAAGCCTA-CCTGTAGTGAAGCTTCTAGTGGTAAATGCAAGTTAAGTAATTTGTTTTCTTTCT-AAAGGATAAATTAAAATAGACTATGATTCAAAGAACAAAACAACTTAATAGAAAACATAATGGAATGCTTTGATATTATGATTCAGGGAA-CTTTGCTTCCCTTGTGGTAGCTAGATTGAGTGAAGGAGATTGCTTAGGTGTAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGCTGCATATCGTCATTTAGATCAATAAGCCTCattaaat------------attaaatattac-cttttaacttttatgcaattaagcagaatttaaaaataaaagttttaaaaaattaaagtttttattactaagta-ttTTT--AAATGCAAATCTCATAGCTCCTTATTATTGTCAAGA-AAAGAATACATTAAA-ATTTATAAATAAGG-------TTTTCTCTCTATGAAGTTTAAAATCTTGCATTAAATATTGGTTATTGGGACTCACAATGTC----CAAGATTATGATTAAGTATCAATGAAGTGTGACTCTTGCAGCAAACATGCATGC-AAATGTTATAAGATTATTTTCAC--GATTTCACATAATTTCTTAAGCATCAAT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 176379 663 - 10971483 ATCAAATATTCTATCCTTCATTGGGGACCATCATTTATT-AAAAAAATGGCCTGAGATCAATTCCAAGCCTA-GCTGTAGTGAAGCTTCTAGTGGTAAATGCAAGTTAAGTAATTTGTTTTCTTTCTAAAAGGATAAATTAAAATAGACTATGATTCAAAGAACAAAACAACTTAATAGAAAAAATAATGGAATGCTTTGATATTATGATTCAGGGAA-CTTTGCTTCCCTTGTGGTAGCTAGATTGAGTGAAGGAGATTGCTTAGGTGTAATGAGCAAATCTTGTAATTGCCAGTATAACCCAAGCTGCATATCGTCATTTAGATCAATAAGCCTCATTAAAT------------ATTAAATATTAC-CTTTTAACTTTTATGCAATTAAGCAGAATTTAAAAATACAAGTTTT-AAAAATTAAAGTTTTTATTACTAAGTA-TTTTT--AGATACAAATCTCATAGTTCCTTATTATTGTCAAGA-AAAGAATACATTAAA-ATTTATAAATAAGG-------TTTTCTCTCTATGAAGTTTAAAATCTTGCATTAAATATTGGTTATTGGAACTCACAATGTC----CAGGATTATGATTAAGTATCGATGAAGTGAGACTCTTGCAGCAAACATGCATGC-AAATGTTATAGGATTATTTTCACATGATTTCACATAATTTCTTAAGCAT-AAT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32802241 650 - 50472720 CTCAAATATACTATTCTTCAATAGGGATGATCATTTATT-TTAAAAATGCCCTGAAATCAATTCCAAGCCTA-GCTATAGTGAAGTTTCTAGTGGCAAATGCAAGTTAAGTAATTTACTTTCTTTTTAAAAGAATAAATTAAAATAGACAATGATTCAAAGAACAAAATGACTTAATAGAAAACATGA-GAAATGCTTTGACATTATGGTTCAGGTAA-TTTTGCTTCCTTTGTGGTAGCTAGACTGAATGAAGCAGATTGCTTAAGTATAATGAGCCAATCTTATAATTGCAAGTATAACCCAATT----TATTGTCATTTAGGTCAATAAGCCTCATTAAAT------------ATTAAATATAAC-C-TTTAACTTTTATTCCATTACGCAGAATTTTAAAAT-AAAGTTTT-AAAAAT--AAGTGTGTATTACTAAG-A-TATTCTTAAATAAAAATCTCATAGCTCCTTATTATTGTAAAGG-AAATAACATATTAAA-ACTTACAAATAAGG-------TTTTCTCAATATT-AGTTTAAAATCTTGCATTAAATGTTGGTTATTGG--CCCACAGCGTC----CAAGAGTATGATTAAGTATCAGTGAAGTATGACTCATGCAGCAAATATGCAAGC-AAATGTTAT--GATTATTTTCATATTATTTCACAAAATTTTCTAAGCAT-AAT i calJac3.chr21 C 0 I 3195 s cebCap1.NW_016107322v1 7754614 660 + 14377064 CTCAAATATTCTATTCTTCAATAGGGACCATCATTTATT-TAAAAAATGCCCTGAAATCAATTCCAAGCCTA-GCTATGGTGAAGTTTCTAGTGGTAAATGCAAGTTAAGTAATTTACTTTCTTTTTAAAAGGATAAATTAAAATAGACAATGATTCAAAGAACAAAACAACTT-ATAGAAAACATGATGGAGTGCTTTGATATTATGATTCAGGGAA-TTTTGCTTCCTTTGTGGTAGCTAGATTGAGTGAAGCAGATTGCTTAGGTATAATGAGCAAATCTTATAATTGCAAGTATAACCCAAGTTGCATATTGTCATTTAGATCAATAAACCTCATTAAAT------------ATTAAATGTTAC-CTTTTAACTTTTATTCCATTAAGCAGAATTTAAAAAT-AAAGTTTT-AAAAAT-AAAGTTTGTATTACTAAGAA-TCTTCTTAAATAAAAATCTCATAGCTCCTTGTTATTGTCAAGG-AAAGAACACATTAAA-ACTCATAAATAAGG-------TTTTCTCAATATT-AGTTTAAAATCTTACATT-AATGTTGGTTATTGGAACCCACAACGTC----CAAGATTATGATTAAGTATCAGTGAAGTATGACTCATGCAGCACATGTGCATGC-AAATGTTATAAGATTATTTTCACATTATTTCACAAAATTTCCTAAGCAT-AAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4215943 662 - 9889416 CTCAAATATTCTATCGTTCAATAGGGGCCATCATTTATT-AAAAAAATGCCCTGAAATCAATTCCAAGCCTAGGGTATAGTGAAGTTTCTAGTGGTAAATGCAAGTTAAGTAATTTACTTTCTTTTTAAAAGGATAAATTAAAATAGACAATGATTCAAAGAACAAAACAACTTAATAGAAAACATGATGGAATGCTTTGATATTATGATTCAGAGAA-TTTTGCTTCCTTTGTGGTAGCTAGATTGAGTGAAGTAGATTGCTTAGGTATAATGAGCAAATCTTATAATTGCAAATATAACCCAAGTTGCATATTGTCATTTAGATCAATAAGCCTCattaaat------------attaaatattac-cttttaacttttattccattaaGCAGAATTTAAAAAT-AAAGTTTT-AAAAAT-AAAGTTTGTATTACTAAGAA-TCTCCTT-AATAAAAATCTCATAGCTCCTTATGATTGTCAAGG-AAAGAACACATTAAA-ACTCATAAATAAGG-------TTTTCTCAATATT-AGTTTAAAATCTTGCATTAAATGTTGGTTATTGGAACCCACAACGTC----CAAGATTATGATTAAGTATCAGTGAAGTATGACTCATGCAGCAAATGTGCATGC-AAATGTTATAAGATTATTTTCACATTATTTCACAAAATTTCCTAAGCAT-AAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20839149 643 + 38779656 CTCCAGCAGTCTTTCCTTTGATAATGACCATTATTT-----AGAAAATGCCTTGAGATCAATTTCAGACC-G-GCTGTAGTGAAGCTTCTAATGGTAAATGTGAGTAAAGTAATTTTGTTTCTTTTTAAAAGAATAAATTAAAATAGACAATGACTCAAAGTATAAAACAACTTAATAGAAAACATAATGGAATGCTTTAATCTTATGGCTGAGGGAA-TGTCGCTTCCTTTGTAGTAGTTAGATTGAGAGAAGCAGAGTTTTTAGGTGTGATGGGCAGATCCTGTAACTGCAAAGATAACCCAAGTTGCATATTA-CATTTAGTTCAGTAAGCCTCATTAACTTCTGGACTTGTAATTCAGtataat-tttttaact------------------atttaa----------ttt-taaaattaaact-----ttattaGGTA-TCTTTTAAAATAAAAATCTAGCAGCTCTTTACTGTTAGCAAGACAAATAATACATTAAACATTTAAAAATAAGGAGTGAGATGTTCTCTATACTAAGTTTTGAACTTTGCTTTAAACTTTGATTATTTTGGCCCCCGAAGTCCATGCATGATTATCATTAA----CAATGAAATATGATTTTTACAGCAAA-GTAGATAC-AAATGTAATAATGTCATTTTCACAGAAATTTA---AATATCTTAGGCAC-AAC i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 28875188 655 - 39895921 CTTGGGCATTTTTTTCTTTGATAGTGACCAACATTTGTA-AAGAACAGTTCCTGAAATCAATTCCATGCTTA-GCTATAGTGAAGCCTGTCATGGTAAATGCAAGTTAAGTAATTCAATTTCTTTTTAAAAGAATAAATTAAAATAGACAGTGATTCAAGGAACAAAACAACTTAATAGAAAGCATAATGGAATGCTTTAATTTTATTATTACGGGAATTTTTGCTTCCTTTA-GGTAGCTAGGTAGAATTAAGCAGGTTTCATAGGCGTGATAAGCAAATCTAATAATTTCAAAT---ACCCAAACAGCATATTATCATTTAGATCAATAAGCCTCATTAAAT------------ATTAATTTTTTCACCTTTAAC----ATGCAATTAAGCAGAATTTAAAGATAAAAGTTTT-AAAATGAAAACTTTATGTTACTGGATA-TCTTTTTAAATTAAAATTTCATGGTACCTTACTACTTGTAAGA-AAATAATACCTTATA-ATATATAAATGAAA-------TTTT-TCTCTACATTGTTTATAGCTTTGTCTTAAACTTTGATTGTTGGGACTTCTAAAGTC----CAGAGTTGTGATTATGCATCAGTGAGGTATGACTCTTATAGCAAATATGCATGCAAAAAGTAATAAAGTTGTTTTTAC-TAAAGTTAC---ATTCCTTAAAGAT-GAT i canFam3.chr31 C 0 C 0 e saiBol1.JH378168 11013349 1522 - 13128814 M a score=963259.000000 s hg38.chr22_KI270732v1_random 38550 91 + 41543 AGTATAAGTAAATTATACTTTCTACACAAGCTCTTCATATATATGAATAGACTATGTTCTAAATGTT--TAAGTCATTGGGAAATCCCAATGT s panTro5.chr20 36385653 91 - 66533130 AGTATAAGTAAATTATACTTTCTACACAAGCTCTTCATATTTATGAATAGACTATGTTCTAAATGTT--TAAGTCATTGGGAAATCCCAATGT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77929198 91 + 205426864 AGTATGAGTAAATTATACTTTCTACACAACCTCTTCATATTTATGAATAGACTATGTTCTAAATGTT--TAAGTCACTGGGGAGTCCCAATGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 89457 89 + 12760026 AGT-TAAGTAAATTATACTTTCTACACAAGCTCTTCATATTTATGAATAGACTATGTTCTAAATGTT--TAAGTCATTGGG-AATCCCAATGT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20261194 91 + 20583478 AGTATAAGTAAATTATACTTTCTACACAAGATCTTCATATTTATGAATAGACTATGTTCTAAATGTT--CAAGTCATTGGGAAATCCCAATGT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 8569 87 - 27701 AGGATAAGTAAATTA----TTCTACACAAGCTCTTCATATTTATGAATAGACCATGTTCTAAATGTT--TCAGTCATTGGGGAATCCCAGCGT i nomLeu3.chrUn_GL398098_1 C 0 I 609 s rheMac8.chr2 204365525 91 - 204787373 GGTATAAGTAAATTATATTTTCTACACAAGCTCTTCATATTTATGAATAGACTGTGTTCTAAATGTT--TAAGTCACTGGGAAATCCTAATGT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 267339 91 - 192460366 GGTATAAGTAAATTATATTTTCTACACAAGCTCTTCATATTTATGAATAGACTGTGTTCTAAATGTT--TAAGTCACTGGGAAATCCTAATGT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 285782 91 - 11645122 GGTATAAGTAAATTATATTTTCTACACAAGCTCTTCATATTTATGAATAGACTGTGTTCTAAATGTT--TAAGTCACTGGGAAATCCTAATGT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 267214 91 - 6739814 GGTATAAGTAAATTATATTTTCTACACAAGCTCTTCATATTTATGAATAGACTGTGTTCTAAATGTT--TAAGTCACTGGGAAATCCTAATGT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 157846 91 - 101219884 GGTATAAGTAAATTATATTTTCTACACAAGCTCTTCATATTTATGAATAGACTGTGTTCTAAATGTT--TAAGTCACTGGGAAATCCTAATGT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 277816 91 - 785044 GGTATAAGTAAATTATATTTTCTACACAAGCTCTTCATATTTATGAATAGACTGTGTTCTAAATGTT--TAAGTCACTGGGAAATCCTAATGT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 177042 91 - 10971483 GGTATAAGTAAATTGTATTTTCTACACAAGCTCTTCATGTttatgaatagactgtgttctaaatgtt--taagtcactgggaaatcccaatgt i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32806086 86 - 50472720 AGTATAAGCAAATTATATTTTTTATACAAGCTCTTCATATTTATGTGTAGGCTATGCCTC-----TT--TAAGTCATTGGGATCCCCCAATGT i calJac3.chr21 I 3195 C 0 s cebCap1.NW_016107322v1 7755274 91 + 14377064 AGTATAAGCAAATTATATTTTTTACACAAGCTCTTCATATTTATGAGTAGGCTATGTTTTAAATGTT--TAAGTCATTGGGAACCCCCAACGT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4216605 91 - 9889416 AGTATAAGCAAATTATATTTTTTACAcaagctcttcatatttatgagtaggctatgttctaaatgtt--taagtcatttggaacccccaatgt i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20839793 87 + 38779656 AGTAAAGCTAGACTGTATTTTCCATGTAGGGTTAGCATATTTATGAGTAGATTATTTTCTAAA------TAAGTCAGTGGGAACTTTGGACAT i otoGar3.GL873528 I 1 C 0 s canFam3.chr31 28875843 93 - 39895921 AGCAAAGCTAAATTGTATTTTCTATATAAGCTTTCCACATGTATCAGTAggttatatgctaattatttgtaagtcgttgggaaatcagaatgg i canFam3.chr31 C 0 C 0 e saiBol1.JH378168 11013349 1522 - 13128814 M a score=35544.000000 s hg38.chr22_KI270732v1_random 38641 3 + 41543 TCC s panTro5.chr20 36385744 3 - 66533130 TCC i panTro5.chr20 C 0 C 0 s panPan2.chr3 77929289 3 + 205426864 TCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 89546 3 + 12760026 TCC i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20261285 3 + 20583478 TCC i ponAbe2.chr3_random C 0 C 0 s rheMac8.chr2 204365616 3 - 204787373 TCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 267430 3 - 192460366 TCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 285873 3 - 11645122 TCC i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 267305 3 - 6739814 TCC i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 157937 3 - 101219884 TCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 277907 3 - 785044 TCC i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 177133 3 - 10971483 tcc i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32806172 3 - 50472720 TCC i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7755365 3 + 14377064 TCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4216696 3 - 9889416 tcc i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20839880 2 + 38779656 -CC i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 28875936 3 - 39895921 tct i canFam3.chr31 C 0 C 0 e saiBol1.JH378168 11013349 1522 - 13128814 M e nomLeu3.chrUn_GL398098_1 8656 609 - 27701 I a score=6448721.000000 s hg38.chr22_KI270732v1_random 38644 656 + 41543 TTCCT-GAGAAACCGTGTGAGAAATTGTACCTAAG--CT-AAAAAAATAGAAGACAAAAAAATCAATTTAACGAGGAATGTAGATTAA-TATCATA----GTATTGTCTCAACTGTGTGCAACCACTACTTATAAAAA-ATGATATAAGAAATGCAGTCTGAAATCTGAATTCTAAATAACAATGTA----GGGCCATTATCCCTCTGGGACCCTTAGGGTCAAAATAAGAGAAAAGAGATGAATGGTGGGTTGGAAGTAAGTCAATGATCCTTGTCAATTTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTGCTTCTGAGTTACAGAATAATAGGTGCCTATCCTGAATGTAACATTCCCTGACACGGAC----TCTGTGTCTATGCTGCTTAGGTGGTTTGTGCATGAGAAAGTGTTTAACATCTGAAAATGGAGACAATCCTTAGAGAA-AGAT----ACATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACGATAGAAATGAAACAAATAGCATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TGTTACA-------------------------------------ATATATACATTTTCAAACAACTAAGTTCAGCACTGACTTC-GGGAGAATCTAGATAAAAC-TGAACTGACATATAATAAGCATGGGTGTAATTAATAGCACAGCAGGGA s panTro5.chr20 36385747 654 - 66533130 TTCCTAGAGAAACCGTGTGAGAAATTGTAGCTAAG--CT-AAAAAAATGGAAGACAAAAG--TCGATTTAACGAGGAATGTAGATTAA-TATCATA----GTATTGTCTCAACTGTGTGCAACCACTACTTATAAAAA--TGGTATAAGAAATGCAGTCTGAAATCTGAATTCTAAATAACAATGTA----GGGCCATTATCCCTCTGGGACCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTCAATGATCCTGGTCAATTTTTTGTATCTGTCAAGAAAAGCATCTGCTTTAGGATATCCATTTTCCTACTTCTGAGTTACCAAATAATAGGTGCCTATACTGAATGTAACATTCCCTGACGTGGAC----TCTGTGTCTATGCTGCTTAGGTGGTTTGTGCATGAGAAAGTGTTTAACATCTGAAAATGGAGACAATCCTTAGAGAA-AGAT----ACATA----------------------------------------------TGA--------------------------------ATTTTAGAA----------------------GGAAATATACCTACGATGGAAATAAAACAAATAGCATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATATACATTTTCAAACAGCTAAGTTCAGCACTGACTTC-GGGAGAATCTAGATAAAAC-TGAACTGACATATAATAAGCATGGGTGTAATTAATAGCACAGCAGGCA i panTro5.chr20 C 0 C 0 s panPan2.chr3 77929292 659 + 205426864 TTCCTAGAGAAACCGTGTGAGAAATTGTAGCTAAG--TTAAAAAAAATGGAAGACAAAAA--ACGATTTAACGAGGAACGTAGATTAA-TATCATA----GTA-TATCTCAACTGTGTGCAACCACTACTTATAAAAA-ATGATATAAGAAATGCAGTCTGAAATCTGAATTCTAAATAAGAACGTA----GGGCCATTATCCCTCTGGGGCCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTCAATGATCCTTGTCAATTTTTTGTATCTGTGAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTACCTCTGAATTACAGAATAATAGGTGCTTATCCTGAGTGTAACATTCCCTGACGTGGACTCTGTCTGTGTCTATGCTGCTTAGGTGGTTTGTGCATGAGAAAGTGTTTAACATCTGAAAATGGAGACAATCCTTAGAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACGATGGAAATAAAACAAGTAACATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGATAAC-----------------------------------------------------------TATTACA-------------------------------------ATATATACATTTTCAAATAACTAAGTTCAGCACTGACTTT-GGGAGAATCTAGATAAAAC-TGAACTGATATATAATAAGCATGGGTGTAATTAATGGCACAGCGGGCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 89549 649 + 12760026 TTCCTAGAGAAACC-TGTGAGAAATTGTAGCTAAG--TT-AAAAAAAAGGAAGACAAAAA--TCGATTTAACGAGGAATGTAGATTAA-TATCATA----GTATTGTCTCAA-TGTGTGCAACCACTACTTATAAAAA-ATGATATAAGAAATGCAGTCTGAAATCTGAATTCTAAATAACAATGTA----GGGCCATTATCCCTCTGGGACCCTTAGGGTCAAAATAAG---AAAAGGATGAATGGTGGGTTGGAAGTAAGTCAATGATCCTTGTCAATTTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTACTTCTGAGTTACAGAATAATA-GTGCCTATCCTGAATGTAACATTCCCTGAC-TGGAC----TCTGTGTCTATGCTGCTTAGGTGGTTTGTGCATGAGAAAGTGTTTAACATCTGAAAATGGAGACAATCCTTAGAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACGATGGAAATAAAACAAATAGCATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATATACATTTTCAAACAACTAAGTTCAGCACTGACTTC-GGGAGAATCTAGATAAAACGTGAACTGACATATAATAAGCATGGGTGTAATTAATAGCACAGCAGGCA i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20261288 662 + 20583478 TTCCTAGAGACACCATGTGAGAAATTGTAGCTAAG--CT-AAAAAAACGGAAGACAAAAA--TCGATTTAACGAGGAATGTAGATTCA-TATCATA----ATATTATCTCAACTGTGTGCAACCACTACTTGTAAAAA-ATGATATAAGAAATGCAGTCTGAAATCTGAATTCTAAGTAAGAATGTAGGGTGGGCCATTATCCCTCTGGGACCCTTAGGGTCAAAATAAGAGAAAAAGGATGAATGGTGGGTTGGAAGTAAGTCAATGATCCTTGTCAATTTTTTGTATCTGTGAAGAAAAGCATCTGCTTGAGGACATCTATTTTCCTACCTCTGAGTTACAGAATAATAGGTGCTTATCCTGAGTGTAACATTCCCTGACGTGGACTCTGTCTGTGTCTCTGCTGCTTAGGTGGTTTGTGCATAAGAAAGTGCTTAACATCTGAAAACGGAGACAATCTTTAAAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACGATGGAAATAAAACAAATAGCATAAATATCTAGC-GTATTTTGTCTTCT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATAGATACATTTTCAAACAACTAAGTTCAGCACTGACTTT-GGGAGAATCTAGATAAAAC-TGAACTGACATATAATAAGCATGGGTGTAATTAATAGCACAGCGGGCA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 9265 654 - 27701 TTCCTAGAGAAACCGTGTGAGAAATTGTAGCTAAG--CT--CAAAAACGGAAGACAAAAA--TCGATTTAACGAGGAATGTAGATTAA-TGTCATA----GTATTATCGCGACTGTGTGCAACCACTACTTATAAACA-ATGATATAAGAAATGCAGTCTGAAATCTGAATTCTAAATAGGAATGTA----GGGCCATTATCCCTCTGGGACCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTCAGTGATCCTTGTCAATATTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTACTTCTGAGTTACAGAATAATAGGTACTTATCCTGAATGTGACATTCCCTGACGTGGAC----TCTGTGTCTTTGCTGCTTAGGTGGTGTGTGCATGAGAAAGTGCTTAACATCTGAAAACGGAGACAATCCTTAGAGAA-AGAG----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACGATGGAAATAAAACAAATAGCATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATATACATTTTCAAGCAACTAAGTTCAGCGCTGACTTT-GGGAGAATCTAGATAAAAC-TGAACTGACATATAATAAGCATTGGTGTAATTAATAGCACAGCGGGCA i nomLeu3.chrUn_GL398098_1 I 609 C 0 s rheMac8.chr2 204365619 652 - 204787373 TTCTTAGAGAAACCACGTGAGAAATTGTAGCTAAG--TT-AAAAAAATGGAAGACAAAAA--TCGATTTAACAAGGACTGTAGATTAA-TATCATA----GTATTATCTCAACTGTGTGCAACCACTGCTTATAAACA-ATGATATAAGAAATGCCGTCTGAAGTCCGAATTCTAAATAAGAATGTA----GGGCTATTATCCCTCTGGGGCCTTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTTAATGATCCTTGTCAATGTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCCACTTCTGAGTTACAGAATAATAGGTACTTATCCTGAATGTAACATTCCCTGATGTGGACTCTGTCTGTGTCTATCCTGCTTCGGTGGTTTGTGCATGAGAAAGTGCTTAATATCTGAAAATGAAGCCAATCCTTAAAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACAGTGGAAAT-----AAATAACATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATACACCTTTTCAAACAACTAAGTTCAGCATTGACTTT-GGGAGA--CTAGATGAAAC-TGAACTGACATATAATGAGCATGGGTGTAATTAATAGCACAGCGGGAA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 267433 652 - 192460366 TTCTTAGAGAAACCACGTGAGAAATTGTAGCTAAG--TT-AAAAAAATGGAAGACAAAAA--TCGATTTAACAAGGACTGTAGATTAA-TATCATA----GTATTATCTCAACTGTGTGCAACCACTGCTTATAAACA-ATGATATAAGAAATGCCGTCTGAAGTCCGAATTCTAAATAAGAATGTA----GGGCTATTATCCCTCTGGGGCCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTTAATGATCCTTGTCAATGTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCCACTTCTGAGTTACAGAATAATAGGTACTTATCCTGAATGTAACATTCCCTGATGTGGACTCTGTCTGTGTCTATCCTGCTTCGGTGGTTTGTGCATGAGAAAGTGCTTAATATCTGAAAATGAAGCCAATCCTTAAAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACAGTGGAAAT-----AAATAACATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATACACCTTTTCAAACAACTAAGTTCAGCACTGACTTT-GGGAGA--CTAGATGAAAC-TGAACTGACATATAATGAGCATGGGTGTAATTAATAGCACAGCGGGAA i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 285876 652 - 11645122 TTCTTAGAGAAACCACGTGAGAAATTGTAGCTAAG--TT-AAAAAAATGGAAGACAAAAA--TCGATTTAACAAGGACTGTAGATTAA-TATCATA----GTATTATCTCAACTGTGTGCAACCACTGCTTATAAACA-ATGATATAAGAAATGCCGTCTGAAGTCCGAATTCTAAATAAGAATGTA----GGGCTATTATCCCTCTGGGGCCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTTAATGATCCTTGTCAATGTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTACTTCTGAGTTACAGAATAATAGGTACTTATCCTGAATGTAACATTCCCTGATGTGGACTCTGTCTGTGTCTCTGCTGCTTCGGTGGTTTGTGCATGAGAAAGTGCTTAATATCTGAAAATGAAGCCAATCCTTAAAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACAGTGGAAAT-----AAATAACACAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATACACCTTTTCAAACAACTAAGTTCAGCACTGACTTT-GGGAGA--CTAGATGAAAC-TGAACTGACATATAATAAGCATGGGTGTAATTAATAGCACAGCGGGAA i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 267308 654 - 6739814 TTCTTAGAGAAACCACGTGAGAAATTGTAGCTAAG--TT-AAAAAAATGGAAGACAAAAA--TCGATTTAACAAGGACTGTAGATTAA-TATCATA----GTATTATCTCAACTGTGTGCAACCACTGCTTATAAACA-ATGATATAAGAAATGCCGTCTGAAGTCTGAATTCTAAATAAGAATGTA----GGGCTATTATCCCTCTGGGGCCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTTAATGATCCTTGTCAATGTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTACTTCTGAGTTACAGAATAATAGGCACTTATCCTGAATGTAACATTCCCTGATGTGGACTCTATCTGTGTCTACGCTGCTTAGGTGGTTTGTGCGTGAGAAAGTGCTTAATATCTGAAAATGAAGCCAATCCTTAAAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACGGTGGAAAT-----AAATAACATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TGTTACA-------------------------------------ATATATACCTTTTCAAACAACTAAGTTCAGCACTGACTTT-GGGAGACTCTAGATGAAAC-TGAACTGACATATAATAAGCATGGGTGTAATTAATAGCACAGCGGGAA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 157940 653 - 101219884 TTCTTAGAGAAACCACGTGAGAAATTTAACGTGAGAGTT-AAAAAAATGGAAGACAAAAA--TCGATTTAACAAGGACTGTAGATTAA-TATCATA----GTATTATCTCAACTCTGTTTAACCACTGCTTATAAACA-ATGATATAAGAAATGCAGTCTGAAGTCTGAATTCTAAATAAGAATGTA----GGGCTATTATCCCTCTGGGGCCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTTAATGATCCTTGTCAATGTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTACTTCTGAGTTACAGAATAATAGGTACTTATCCTGAATGT---ACTCCCTGATGTGGACTCTGTCTGTGTCTATGCTGCTTAGGTGGTTTGTGCATGAGAAAGTGCTTAATATCTGAAAATGAAGCCAATCCTTAAAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACGGTGGAAAT-----AAATAACATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATATACCTTTTCAAACAACTAAGTTCAGCACTGACTTT-GGGAGAATCTAGATGAAAC-TGAACTGACATAGAATAAGCATGGGTGTAATTAATAGCACAGCGGGAA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 277910 653 - 785044 TTCTTAGAGAAACCACGTGAGAAATTGTAGCTAAG---T-TAAAAAATGGAAGACAAAAA--TCGATTTAACAAGGACTGTAGATTAA-TATCATA----GTATTATCTCAACTGTGTGCAACCACTGCTTATAAACA-ATGATATAAGAAATGCCGTCTGAAGTCTGGATTCTAAATAAGAATGTA----GGGCTATTATCCTTCTGGGGCCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTTAATGATCCTTGTCAATGTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTACTTCTGAGTTACAGAATAATAGGCACTTATCCTGAATGTAACATTCCCTGATGTGGACTCTATCTGTGTCTATGCTGCTTAGGTGGTTTGTGCGTGAGAAAGTGCTTAATATCTGAAAATGAAGCCAATCCTTAAAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATACCTACGGTGGAAAT-----AAATAACATAAATATCTAGCTGTATTTTGTCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATATACCTTTTCAGACAACTAAGTTCAGCACTGACTTT-GGGAGACTCTAGATGAAAC-TGAACTGACATATAATAAGCATGGGTGTAATTAATAGCACAGCGGGAA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 177136 654 - 10971483 ttcttagagaaaccatgtgagaaattgtagctagg--tt-AAAAAAATGGAAGACAAACA--TCGATTTAACAAGGAATGTAGATTAA-TATCATA----GTGTTATCTCAACTGTGTGCAACCACTGCTTATAAACA-ATGATATAAGAAATGCAGTCTGAAGTCTGAATTCTAAATAAGAATGTA----GGGCCATCATCCCTCTGGGGCCCTTAGGGTCAAAATAAGAGAAAAGGGATGAATGGTGGGTTGGAAGTAAGTTAATGATCCTTGTCAATGTTTTGTATCTGTCAAGAAAAGCATCTGCTTGAGGACATCCATTTTCCTACTTCTGAGTTACAGAATAATAGGTCCTTACCCTGAATGTAACATTCCCTGATGCGGACTCTGTCTGTGTCTACGCTGCTTAGGTGGTTTGTGCATGAGAAAGTGCTTAATGTCTGAAAATGAAGCCAATCCTTAAAGAA-AGAT----ATATA----------------------------------------------TGA--------------------------------ATTTTAAAA----------------------GGAAATATGCCTACGATGGAAAT-----AAATAACGTCAATATCTAGCTGTATTTCATCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATATATACCTTTTCAAACAACTAAGTTCAGCACTGACTTT-GGGAGAATCTAGATGAAAC-TGAACTGACATGTAATAAGCATGGGTGTAATTAATAGCACAGTGGGCA i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32806175 691 - 50472720 TTCATAGAGAAACCATGTTAGAAATGGTAGTAAAG--TT-ATAAAAATGCAAGACAAAA---TCAATTTAAGGAAGAATGTAGATTAA-TGTCGTA----GTATTATCTCAACTGCGTGCAACCACTTCTTATTGCAA-ATGATGCAA-AAATGCAGTCTCAAGTCTGAATTCTAAATAAGAATGTA----GGGCCATGAGCCCTCT----------AAATCACAATAAGAGAAAAGGATTGGATGGTGGGTTAGAAGTAGGTCTAAGTTGCTTGTCAATTTTTCTTATCTGCCAATAAGAACACCTGCTTGAGGACATCCATTTTCCTACTTCTGAGTTACAGAATAATAGGTGCTTATGCTGAATGTAGCATTCCCCAACTTGAAC----TCTGCATTTATGCTGCTTAGGTGGTTTGTGTATGGGAAAGAGCTTAATATATGAAAATGAAGCCAATCCttataaaa-gaat----atata-tatat-------tttttttCCTT----------------------TTGAAATTCATGCATATATATATTTATATGTATATAATGTAAAA----------------------GGGAATTCACCTATGACAGAAATGAAACAAATAACATAAATGTTGAGCTGTATTTTGCCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATGTACAGAATTTCAAACGACTAAGTTCAACATGGACTTT-GGGAGAATCTAGTTAAAGC-TGAACTAACATACAATAAGCATGGGTGTACTTAATAGCAGAGCAGACA i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7755368 690 + 14377064 TTCCTAGAAAAACCATGTTAGAAATGGTAGTAAAG--TT-ATAGAAATGCAAGACAAAA---TCGATTTAAGGAAGAATGTAGATTAA-TATCATA----GTATTATCTCAACTGCATGCAACCACTTCTTATAACAA-ATGATATAAGAAATGCAGTCTCAAGTCTGAATTCTAAATAAGAATGTA----GGGCCATGATCCGTCT----------AAATCAAAATAAGAGAAAAGGATTGGATGGTGGGTTAGAAGTAGATCGAAGTTGCTTGTCAACTTTTCTTATCTGCCAAGAAGAGCATCTGCTT---GACATCCATTTTCCTACTTCTGAGTTACAGAATAATAGGTGCTTATCCTGAATGTAGCATTGCCTGACTTGAAC----TCTGTATTTATGCTGCTTAGGTGGTTTCTGCATGAGAAAGTGCTTAATATGTGAAAATGAAGCCAATCCTTATAAAAGGAAT----ATAtg-tgtgtgtgtgtgtgtgtgtgtgt----------------------gtg-------tgtgtgtgtgtATATATATGCATGTATTTTAAAA----------------------GGAAATACACCTATGATGGAAATGAAACAAATAACATAAATATTGAGCTGTAGTTTGCCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATGTACACAGTTTCAAACAACTAAGTTCAACACGGACTTT-GGGAGAATCTAGTTAAAAC-TGAACTGACATACAGTAAGCATGGGTGTACTTAATAGCTCAGCAGGCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4216699 716 - 9889416 ttcctagagaaaccatgttagaaatggtagtaaag--tt-ataaaaatgcaagacaaaa---tcgatttaaggtagaatgtagattaa-tataata----gtacgatCTCAACTGCGTGCAACCACTTCTTTTAACAA-ATGATATAAAAAATGCAGTCTCAAGTCTGAATTCTAAATAAGAATGTA----GGGCCATGATCCGTCT----------AAAGCAAAATAAGAGAAAAGGATTGGATGGTGGGTTAGAAGTAGGCTGAAGTTGCTTGTCAATTTTTCTTATCTGCCAAGAAGAGCATCTGCTTGAGGACATCCATTTTCCTACCTCTGAGTTACAGAATAATAAGTGCTTATCCTGAATGTAGCATTCCCCAACTTAAAC----TCTGTATTTATGCTGCTTAGCTGGTTTGTGCATGAGAAAGTGCTTAATATGTGAAAATGAAGCCAATCTTTATAAAAGGtat----atatattatatatatatatatTCTCTTTTAAAATATTTACCATtatatatatta-------tatatatatatatatatatGCATGTATTTTAAAA----------------------GGAAATACACCTATGATGGAAATGAAACAAATAACATAAATATTGAACTGTGTTTTGCCTTTT------------------------------------------------TGGTAAC-----------------------------------------------------------TATTACA-------------------------------------ATGTACACAGTTTCAGACAACTAAGTTCAACACGGACTTT-GGGAGAATCTAGTTAAAAC-TGAACTGACATGCAATAAGCATGGGTGTACTTAATAGCACAGCAGGCA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20839883 632 + 38779656 TTCCCATAGAAGGCATCTTAGAAAGAGTAGTTTAG--TT-ATAAGGAGAAAAGACAAAG---TCCTTTTAGTCAAGAATGTAGG-AAA-CGTCACA----CTCATA-AGCAAATGCAGGCAACCACTTATGACAAAGG-G-GAAATAGGAAATGC-------ACTTGGAATTCTAAATAATAATTTT----AGCCTATCATCCTTCTGTAAACATCATGTTTAAAGTAAGAGGAAAAGGATGAATTGTGGCTTGGAAACAGGTAGATGTTGGTTGCAGAAGT---GTATCTGTCAAGAAAAACATC-GCTTGAGA------ATTCTCTGACTTCTGACTTACATAAC-ATGGGTGCTGGATTTCAGGGTGGTTTTCCTTGACTGGGATTCTGTCTGTCTCTGTGCCACTTAGGGGGCTTGTGTATTAGAAAGTGGTCAATATGTGAAAGTGAAGCCAATCTTT-GAGAT-GAATTTTAATATG----------------------------------------------GAG--------------------------------ATTTCAGAA----------------------GAAAATATATCTACTGTGAATATAAAACAAGTAACATAAATGTTCAGATTTA-TTTGTCTTTT------------------------------------------------AAGGAAT-----------------------------------------------------------AAGTTAA-------------------------------------TTAT------TTCTGAACAACCAAATTAGATGCTGACACT-GGGATAATATAGATAAAAC-TAAACGAATATTTAATACGTATAGGTGTAACCTGTAG-ACAACAAAGA i otoGar3.GL873528 I 1 C 0 s canFam3.chr31 28875939 817 - 39895921 ttcccataaaaaacatgttagaaatagtaatcagg--tt-atggggacagaaggcaaaaa--tctgcatgttctagaatgtacataaagcatcatattcggtattaattcaactgtgcacaactgccacttacaacaacatgttatagaaaatgc-------attctgaattctaagtaagaatgTT----GGCTCATGAGCTCTCTAGGGGCAGCATGGTCA-AATAAGAAGAAAGGAATGGACAGTCAGCTGCAAACAGGTAGATGTCCCTTGTCAATTTTTTATATCATTCAAGAGGAGCATCTGCTTGAGTAGTCTTTTCCTCTGACTTCTGACTTATGGAATAATAGATACAAATCCTTACAGTAGCATTTCCTGACTTGGACGCTGCCCATTTCTATGCTTCCTTAGGTCTTTGCACATTAGAAACTGCTAAGTAAATGAAAGTAAATCCAATCCTT-TAAAA-AAAT----ACAGC----------------------------------------------TAA--------------------------------TTATTAAGATAAAGTGGAATAGATTTGATTTAAAAATATATTTACTATGCAAATAAAACAAATAACACGATTGTTCAGATTTATTTTCTCTTTTAAAAGAACTATCACGGATGTTAATTGAAGAAATTGGATATggggtatatgggagctttctgtactatctttataagttttctgtaaatctaaaactgttttaaaataaaatatttattaCAAATTAAAAGAAAAAAGAGCTATCACAGGTAGTTGATGATTTACACATTTCCAAATA------CTATACATTGACTTTAGGGATAATCTAGAGAAAAC-TGAACTGACATCTAACATGTGTAGTTGTAATTTGTAGCACAACAGTTG i canFam3.chr31 C 0 C 0 e saiBol1.JH378168 11013349 1522 - 13128814 M a score=1186941.000000 s hg38.chr22_KI270732v1_random 39300 111 + 41543 AAACCATGGGGGTGTTTCCTGAGAAAGAGGGACTATAGAGAGGCACCAGAAAACCCAGCTCATTTGCAGGATTCTGGGGAGTGTCAGGAGCAGTTATTATATTCAGAACTG s panTro5.chr20 36386401 111 - 66533130 AAACCATGGGGATGTTTCCTGAGAAAGAGGGACTATAGAGAGGCACCAAAAAACCCAGCACATTTACAGGATTCTGGGGAGTGTCAGGAGCAGTTATTATATTCAGAACTG i panTro5.chr20 C 0 C 0 s panPan2.chr3 77929951 111 + 205426864 AAACCATGGGGGTGTTTCCTGAGAAAGAGGGACTATAGAGAGGCACCAGAAAACCCAGCTCATTTACAGGATTCTGGGGAGTGCCAGCAGCAGTTATTATATTCAGAACCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 90198 109 + 12760026 AAACCATGGGGGTGTTTCCTGAGAAAGAGGGACTATAGAGAGGCACCAG-AAACCCAGC-CATTTACAGGATTCTGGGGAGTGTCAGGAGCAGTTATTATATTCAGAACTG i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20261950 111 + 20583478 AAACCATGGAGGTGTTTCCTGAGAAAGAGGGACTATAGAGAGGCACCAGAAAACCCAGCTCATTTACAGGATTCTGGGGAGTGCCAGCAGCAGTTATTATATTCAGAACCG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 9919 102 - 27701 GAACCATGGGGGTATTTCCTGAGGAAGAGGGACTATAGAGAGGCAAAAGAAAACCCAGCTC---------ATTCTGGGGAGTGCCAGGAGCAGTTATTATATTCAGAACTG i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204366271 110 - 204787373 AAACCATGGGAGTGTTTCCTGAGAGAGAGGGACTATACGGAGGCACCAGAAAACCCAGTGCATTT-CAGGATTCTTGGGATTGCCAGCAGCAGTTATTATATTCAGAACCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 268085 110 - 192460366 AAACCATGGGAGTGTTTCCTGAGAGAGAGGGACTATACGGAGGCACCAGAAAACCCAGTGCATTT-CAGGATTCTTGGGATTGCCAGCAGCAGTTATTATATTCAGAACCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 286528 110 - 11645122 AAACCATGGGAGTGTTTCCTGAGAGAGAGGGACTATACGGAGGCACCAGAAAACCCAGTGCATTT-CAGGATTCTTGGGATTGCCAGCAGCAGTTATTATATTCAGAACCT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 267962 110 - 6739814 AAACCATGGGAGTGTTTCCTGAGAGAGAGGGACTATAGGGAGGCACCAGAAAACCCAGTGCATTT-CAGGATTCTTGGGACTGCCAGCAGCAGTGATTATATTCAGAACCT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 158593 110 - 101219884 AAACCATGGGAGTGTTTCCTGAGAAAGAGGGATTATAGGGAGGCACCAGAAAACCCAACCCATTT-CAGGATTCTTGGGATTGCCAGCAGCAGTTATTATATTCAGAACCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 278563 110 - 785044 AAACCATGGGAGTGTTTCCTGAGAAAGAGGGACTATAGGGAGGCACCAGAAAACCCAGTGCATTT-CAGGATTCTTGGGACTGCCAGCAGCAGTTATTATATTCAGAACCT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 177790 111 - 10971483 AAACCATGGGAGTGTTTCCTGAGAAAGAGGGACTATAGGGAGGCACCAGAAAACCCAATCCATTTACAGGATTCTTGGGATTGCCAGCAGCAGTTATTGTATTCAGAACCT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32806866 109 - 50472720 AAACCATGGGAGGGTTTCCTGAGAGATA--GACTATAAAGAGACAACAGAAAGCCCAACCCATTTACAGGATCCTTGGCAGTTCCGGCAGCAGTTATTATATTCAGAGCCA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11014871 109 - 13128814 AAACCATGGGAGTGTTTCCTAAGAGAGA--GACTAGAGAGAGGCACCAGAAAGCCCAACCCATTTACAGGATCCTTGGCAGTTCCAGCAGCAGTTATTAGATTCAGAACCA i saiBol1.JH378168 M 1522 C 0 s cebCap1.NW_016107322v1 7756058 108 + 14377064 AAACCATGGGAGTG-TTCCTGAGAGAGA--GACTATAGAGAGGCACCAGAAAGCCCAACCCATTTACAGGATCCTTGGCAGTTCCAGCAGCAGTTATTAGATTCAGAACCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4217415 109 - 9889416 AAACCATGGGAGTGTTTCCTGAGAGAGA--GACTATAGAGAGGCACCAGAAAGCCCAACCCATTTGCAGGATCCTTGGCAGTTCCAGCAGCAGTTATTATATTCAGTACTA i aotNan1.NW_018487195v1 C 0 I 304 s otoGar3.GL873528 20840515 100 + 38779656 AAACTGTGGGAGTGTTGCCTGAGA-AGAGGGAATGTTGAAAGGCACCCACAAGCCTAAT-------CAGTTTTTTGAGCACTG---GAAGCAGTCATTTTATTCAGAACTG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28876756 106 - 39895921 AAGCCATGTGAATGCTGACTGACA-AGAAGGACTGTCCAGAGGCATTGCAGACCCCAGATGATTTGCAGGATGCTAGGAGGTGTAGGCAATAGTTACTATGTT----ACTG i canFam3.chr31 C 0 C 0 a score=297996.000000 s hg38.chr22_KI270732v1_random 39411 26 + 41543 AGAATTTATTTCT-AACTCAG-CAACCC s panTro5.chr20 36386512 23 - 66533130 AGAACTTATTTC----CTCAG-CAACTT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77930062 26 + 205426864 AGAACTTATTTCT-AACTCAG-CAACCC i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 90307 26 + 12760026 AGAACTTATTTCT-AACTCAG-CAACCC i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20262061 26 + 20583478 AGAACTTATTTCT-AACTCAG-CAACCC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 10021 26 - 27701 AGAACTTATTTCT-AACTCAG-CAACCC i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204366381 26 - 204787373 AGAACTAATTTCT-AACTCAG-CAATCC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 268195 26 - 192460366 AGAACTAATTTCT-AACTCAG-CAATCC i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 286638 26 - 11645122 AGAACTAATTTCT-CACTCAG-CAATCC i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 268072 26 - 6739814 AGAACTTATTTCT-ACCTCAG-CAACCC i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 158703 26 - 101219884 AGAACTTATTTCT-AACTCAG-CAACCC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 278673 26 - 785044 AGAACTTATTTCT-AACTCAG-CAACCC i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 177901 26 - 10971483 AGAACTTATTTCT-GACTCAG-CAACCC i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32806975 26 - 50472720 AGAACTTATTTCT-AACTCAG-CAATCC i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11014980 26 - 13128814 ATAACTTATTTCT-AACTCAG-CAATCC i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7756166 26 + 14377064 AGAACTTATTTCT-AACTCAG-CAATCC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4217828 26 - 9889416 AGAATTTATTTCT-AACTCAG-CAATCC i aotNan1.NW_018487195v1 I 304 C 0 s otoGar3.GL873528 20840615 28 + 38779656 AGACAGTACTTCCAAAATCAGACAGCCC i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28876862 26 - 39895921 GGAAATCACTTCC-AAACTAG-CAATCT i canFam3.chr31 C 0 I 228 a score=18288.000000 s hg38.chr22_KI270732v1_random 39437 2 + 41543 GT s panTro5.chr20 36386535 2 - 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77930088 2 + 205426864 AT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 90333 2 + 12760026 GT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20262087 2 + 20583478 AT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 10047 2 - 27701 AT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204366407 2 - 204787373 GT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 268221 2 - 192460366 GT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 286664 2 - 11645122 GT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 268098 2 - 6739814 GT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 158729 2 - 101219884 AT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 278699 2 - 785044 GT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 177927 2 - 10971483 GT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32807001 2 - 50472720 AT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11015006 2 - 13128814 AT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7756192 2 + 14377064 AT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4217854 2 - 9889416 AT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20840643 2 + 38779656 AT i otoGar3.GL873528 C 0 I 406 e canFam3.chr31 28876888 228 - 39895921 I a score=2634095.000000 s hg38.chr22_KI270732v1_random 39439 265 + 41543 AGTTCTgactgaggtgcagtggtgcaat-catagctca-tcacagccccaaactcctaggttcatatggtcctctcatctcagcctcctgatagctatgaccacgggtgtgcactactatgcccagctcatttatttta-----tattttgt----------tttcat----ttcatttgtaaagactgggtcttgctatgttgcccaggcaggtcacgaactcctatcttcaagcagtcctctaacctaggcctccctaagtactgagattataggcatgagcca s panTro5.chr20 36386537 265 - 66533130 AGTTCTggctgaagtgcagtggtgcaat-catagctca-tcacagccccaaactcctaagttcatatggtcctctcatctcagcctcctgatagctatgaccacaggtgtgcactactatgcccagctagtttatttta-----tattttat----------tttcat----ttcatttgtaaagactgggtcttgctatattgcccaggcaggtcacgaactcctatcctcaagcagtcctttaacctaggcctccctaagtactgagattacaggcatgagcca i panTro5.chr20 C 0 C 0 s panPan2.chr3 77930090 266 + 205426864 AGTTCTggctgaagtgcagtggtgcaat-catagctca-tcacagccccaaactcctaggttcatatggtcctctcatctcagcctcctggtagctatgaccacaggtgtgcactaccatgcccag----tttatttta-----tattttat-----tttcatttcat----ttcatttgtaaagactgggtcttgctatgttgcccaggcaggtcacgaactcctatcctcaagcagtcctctaacctaggccttccaaagtactgagattacaggcatgagcca i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 90335 261 + 12760026 ATTTCTg-ctgaagtgcagtggtgcaat-catagctca-tcacagccccaaactcctaggttcatatggtcctctcatctcagcctcctgatagctatgaccacaggtgtgcactactatgcccagctagtttatttta-----tatttt-t----------tttcat----ttcatttgtaaagactgggtcttgctatgttgcccaggcaggtcacgaactcctatc-tcaagcagtcctctaacctaggcctccctaagtactgagattataggcatga-cca i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20262089 275 + 20583478 AATTCTggctgaagtgcagtagtgcaat-catagctca-tcacagtcccaaactcctaggttcatatggtcctgtcatctcagcctcctggtagctatgaccacaggtgtgcactaccatgcccagctactttattgta-----tattttattttcatttcatttcat----ttcatttgtaaagactgcgtcttgctatgttgcccaggcaggtcacggactcctatcctcaggcagtcctctaacctaggcctcccaaagtactgagattacaggcatgagcca i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 10049 266 - 27701 AGTTCTggctgaagtgcagtggtgcaat-catagctcattcacagccccaaactcctgggttcatatggtcctctcatctcagccttctggtagctatgaccacaggtgtgcactactttgtccagccagtttatttta-----tattttac----------tttcat----ttcatttgtaaagactgggtcttgctacgttgcccaggcaggtcacaaactcctatcttcaagcagtcctctaacctaggcctcccaaagtactgagattacaggcatgagcca i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204366409 265 - 204787373 AATTCTggctgaagtacagtggtgcagt-catagctca-tcgcgaccccaaactcccaggttcatacggtcctctcctctcagcctccgggtggctatgaccacaggtgtgcactactgtgaccagctagtttacttta-----tattttat----------tttcat----ttcatttgtaaaaactgggtcttgctatgttgcccaggctggtcacggactcctatcctcaagcaatcctctaacctaggcctcccaaaatactgagattacaggcatgagcca i rheMac8.chr2 C 0 C 0 s macFas5.chr2 268223 265 - 192460366 AATTCTggctgaagtgcagtggtgcagt-catagctca-tcgcgaccccaaactcccaggttcatacggtcctctcctctcagcctccgggtggctatgaccacaggtgtgcactaccatgaccagctagtttacttta-----tattttat----------tttcat----ttcatttgtaaaaactgggtcttgctatgttgcccaggctggtcacggactcctatcctcaagcaatcctctaacctaggcctcccaaaatactgagattacaggcatgagcca i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 286666 265 - 11645122 AATTCTggctgaagtgcagtggtgcagt-catagctca-tcgcgaccccaaactcccaggttcatacggtcctctcctctcagcctccgggtggctatgaccacaggtgtgcactaccatgaccagctagtttacttta-----tattttat----------tttcat----ttcatttgtaaaaactgggtcttgctatgttgcccaggctggtcacggactcctatcctcaagcaatcctctaacctaggcctcccaaaatactgagattacaggcatgagcca i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 268100 265 - 6739814 AATTCTggctgaagtgcagtggtgcagt-catagctca-tcgcagccccaaactcccaggttcatacggtcctctcctctcagcctccgggtggctatgaccacaggtgtgcactaccatgaccagctagtttactttc-----tattttat----------tttcat----ttcatttgtaaaaactgggtcttgctatgttgcccaggctggtcacggactcctatcctcaagcaatcctctaacctaggcctcccaaaatactgagattacaggcataagcca i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 158731 266 - 101219884 AATTCTggctgaagtgcagtggtgcagtaaatagctca-tcgcgaccccaaactcccaggttcacactgtcctctcctctcagcctccgggtggctatgaccacaggtgtgcactaccatgaccagctagtttacttta-----tattttat----------tttcat----ttcatttgtaaaaactgggtcttgctatgttgcccaggctggtcacggactcctatcctcaagcaatcctctaacctaggcctcccaaaatactgagattacaggcatgagcca i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 278701 265 - 785044 AATTCTggctgaagtgcagtggtgcagt-catagttca-tcgtgaccccaaactcccaggttcctacggtcctctcctctcagcctccgggtggctatgaccacaggtgtgcactaccatgaccagctagtttactttc-----tattttat----------tttcat----ttcatttgtaaaaactgggtcttgctatgttgcccaggctggtcacggactcctatcctcaagcaatcctctaacctaggcctcccaaaatactgagattacaggcatgagcca i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 177929 268 - 10971483 AATTCTggctgaagtgcagtggtgcagt-catagctca-tcgcag-cccgaacttccaggttcatacggtcctctcctctcagcctcctggtggctatgaacacaggtgtgcgctgccatgaccagctagtttactttgtcttttattttat----------ttttatttcattcatttgtaaaaacggggtcttgctatgttgcccaggctggtcacggactcctatcctcaagcaatcctctaacctaggccttccaaaatactgagattacaggcatg----- i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32807003 268 - 50472720 AATACTggctgaggtgcagtgatacaat-cgtagctca-ttgcagccccaaactcctagtttcatgtaattctctcattttagtctactagtagctatcaccacaggtagccaccaccattcccagcTAG-TTATTTTA--TTGTATTGCAT--------TAttttat----tttatttgtaaagactgaatcttgctatgttgtccaagttggtcacaaactcctatccacaagcaatcctctaacctaggcctcct-aaatactgagattataggcatgaggca i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11015008 268 - 13128814 AATcctggctgaagtgcagtgatataat-catagctca-tcacagccccaaactcctagtttcatgtaatcttctcatctcagtctactggtagctatgaccacagatgggcaccaccattcccagctag-ttatttta--ttttattgtat--------tcttttat----tttatttgtaaagactggatcttgctatgttgtccaggctggtcacaaactcctatcctcaagcaatcctctaaactaggtctcct-aattactgagattttaggcatgattta i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7756194 268 + 14377064 AATcctggctgaagtgcagtgatataat-cgtagctca-tcgcagccccaaactcctagtctcatgtaatcctctcatctcagtctactggtagctatcaccataggtgggcaccaccattcctagctag-ttatttta--ttttattgtgt--------tattttat----tttatttgtaaagactggatcttgctatgttgtccaggctggtcacaaactcctatcctcaagccatcttttaacctaagcctcct-atgtgctgagattataggcatgagcca i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4217856 265 - 9889416 AATcctggctgaagtgcaatgatacaat-cgtagctca-ttgcagccccaaactcctagtttcatgtaatcctctcatctcagtctactggtagctatcaccacaggtgggcaccaccattcc-agctag-ttatttta--tt-tattgtat--------tattttat----ttt-tttgtaaagactggatcttgctatgttgtccaggctggtcacaaactcctatcctcaagcaatcctctaacctaggcctcct-aagtactgagattgtaggcatgagtta i aotNan1.NW_018487195v1 C 0 C 0 e otoGar3.GL873528 20840645 406 + 38779656 I e canFam3.chr31 28876888 228 - 39895921 I a score=69276.000000 s hg38.chr22_KI270732v1_random 39704 7 + 41543 ttgcatc s panTro5.chr20 36386802 7 - 66533130 ttgcatc i panTro5.chr20 C 0 C 0 s panPan2.chr3 77930356 7 + 205426864 ttgcatc i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 90596 7 + 12760026 ttgcatc i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20262364 7 + 20583478 ttgcatc i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 10315 7 - 27701 ttgcacc i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204366674 7 - 204787373 ttgcgtc i rheMac8.chr2 C 0 C 0 s macFas5.chr2 268488 7 - 192460366 ttgcgtc i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 286931 7 - 11645122 ttgcgtc i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 268365 7 - 6739814 ttgcgtc i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 158997 7 - 101219884 ttgcgtc i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 278966 7 - 785044 ttgcgtc i manLeu1.NW_012099043v1 C 0 C 0 s calJac3.chr21 32807271 7 - 50472720 ttgcatc i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11015276 7 - 13128814 ttgcatc i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7756462 7 + 14377064 ttgcctc i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4218121 7 - 9889416 ttgcatc i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 28877116 7 - 39895921 TGGCAGT i canFam3.chr31 I 228 C 0 e otoGar3.GL873528 20840645 406 + 38779656 I e colAng1.NW_012123820v1 178197 0 - 10971483 C a score=4670656.000000 s hg38.chr22_KI270732v1_random 39711 398 + 41543 tggcTCAAAA---GTATTTCTGTCTTAGTGGCTTTAGCAAAGAAGTGCCA-TTTTGGGGACATATACAATGGTGTGCTGTTTGGGAGTGATACA-AAAATAATTATAAGAA---TGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTT-ATCCCAAGTTTTTAAACAAGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTAAATGTAGCAAAAATTTTAA-ACATTATCAT----GAATACACATACAATTTTAATCAATTTGGTTTCCACGATGAATTTACATGCTTAAATTGCTAATTTCAAGT-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGG-AAGTGGCGCTTACAAATGTAGCAAACTTAAATTTTGAGGACAATTTAA-----CTTCCATTTTT s panTro5.chr20 36386809 405 - 66533130 tggcTCAAAA---ATATTTCTGTCTTAATGGCTTTAACAAAGAAGTGCCA-TTTTGGGGACATATACAATGGTGTGCTGTTTGGGAGTGACACA-AAAATAATTATAAGAAGAATGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTCAACAAGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTAAATGTAGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATTTGGTTTCCACGATGAATTTACATGCTTAAATT-CCAATTTTGATT-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGTGGCACTTACAAATGTAGCAAACTTAAATTTTGAGGACAATTTAATTTAACTTCCATTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77930363 405 + 205426864 tggcTCAAAA----TATTTCTGTCTTAATGGCTTTAACAAAGAAGTGCTA-TTTTGGGGGTATATACAATGGTGTGCTGTTTTGGAGTGACACA-AAAATAATTATAAGAAGAATGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACAAGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTAAATGTAGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAAGTTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATC-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-CAGTGGCGCTTACAAATGTAGCAAACTTAAATTTTGAGGACAATTTAATTTAACTTCCATTTTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 90603 399 + 12760026 tggcTCAAAA---ATATTTCTGTCTTAATGGCTTTAACAAAGAAGTGCCA-TTTTGGGGACATATACAATGGTGTGCTGTTTGGGAGTGACA-A-AAAATAATTATAAGAA---TGGAATGAATA-GTCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACAAGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG--TTAAATGTAGCACAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATTTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATT-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGG-AAGTGGT-CTTACAAATGTAGCAAACTTAAATTTTGAGGACAATTTAATTTAACTTCCATTTTT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20262371 406 + 20583478 tggctCAAAA---ATATTTCTGTCTCAATGACTTTAACAAAGAAGTGCCA-TTTTGGGGACGTATACAATGGTGTGCTGTTTTGGAGTAACACA-AAAATAATTATAAGAAGAATGGAATGAATATGGCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACAAGCATAATTTTAGAG-CTTTTGTAACTAACTTAGGG-TTTAAATGTAGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATTTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATT-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGTGGCACTTACAAATGTAGCAAACTTAAGTTTTGAGGACAATTTAATTTAACTTCCATTTTT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 10322 406 - 27701 tggcTCAAAA---ATATTTCTGTCTTAGTGGCTTTAACAAAGAAGTGCCA-TTTTGGGGATATATACAATGGTGTGCTGTTTGGGAGTGACACA-AAAGTAATTTTAAGAAGAATGGAACGAATATGTCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACAAGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTAAATGTAGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATTTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATT-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGTGATGCTTACAAATGTAGCAAACTTAAATTTTGAGGACAATTTAATTTAACTTCCATTTTT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204366681 406 - 204787373 tggccCCAAA---ATATTTCTGTCTTAATGGCTTTAACAAAGAAGTGCTA-TTTTGGGGATGTATACAATGGTGTGCTGTTTTGGAAGGACACA-AAAATACTTATAAGAAGAATGGAATGAATATGTCAGTATATTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACACGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTAAGTGTGGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATGTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATC-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGCAACACTTACAAATGTAGCAAACTTAAATCTTGAGGACAATTTAAAATAACTTCCATCTTC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 268495 402 - 192460366 tggccCCAAA---ATATTTCTGTCTTAATGGCTTTAACAAAGAAGTGCTA-TTTTGGGGATGTATACAATGGTGTGCTGTTTTGGAAGGACACA-AAAATACTTATAAGAAGAATGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACACGCATAATTTTAGAG-TTTTTG----TAACTTAGGG-TTTAAGTGTGGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATGTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATC-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGCAACACTTACAAATGTAGCAAACTTAAATCTTGAGGACAATTTAATTTAACTTCCATCTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 286938 406 - 11645122 tggccCCAAA---ATATTTCTGTCTTAATGGCTTTAACAAAGAAGTGCTA-TTTTGGGGATGTATACAATGGTGTGCTGTTTTGGAAGGACACA-AAAATACTTATAAGAAGAATGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACACGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTAAGTGTGGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATGTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATC-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGCGACACTTACAAATGTAGCAAACTTAAATCTTGAGGACAATTTAATTTAACTTCCATCTTC i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 268372 406 - 6739814 tggccCCAAA---ATATTTCTGTCCTAATGGCTTTAACAAAGAAGTGCTA-TTTTGGGGATGTATACAATGGTGTGCTGTTTTGGAAGGACACA-AAAATACTTATAAGAAGAACGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACACGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTAAGTGTGGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATGTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATC-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGCGACACTTACAAATGTAGCAAACTTAAATCTTGAGGACAATTTAATTTAACTTCCATCTTT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 159004 407 - 101219884 tggccCAAAA---ATATTTCTGTCTTAATGGCTTTAACAAAGAAGTGCTA-TTTTGGGGATATATACAATGGTGTGCTGTTTTGGAAGGACACA-AAAATACTTATAAGAAGAATGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTTAAGCCCAAGTTTTTAAACAAGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTAAATGTGGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATGTGGTTTCCATGATGAATTTACATGCTTAAATTCCTAATTTCAATC-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGCAACACTTACAAATGTAGCAAACTTAAATCTTGAGGACAATTTAATTTAACTTCCATCTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 278973 406 - 785044 tggccCCAAA---ATATTTCTGTCTTAATGGCTTTAACAAAGAAGTGCTG-TTTTGGGGATGTATACAATGGTGTGCTGTTTTGGAAGGACACA-AAAATACTTATAAGAAGAATGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTT-AGCCCAAGTTTTTAAACACGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGG-TTTCAGTGTGGCAAAAATTTTAA-ACATTATCAT----GAATACACAGAAAATTTTAATCAATGTGGTTTCCACGATGAATTTACATGCTTAAATTCCTAATTTCAATC-TGCTGCTAGATATGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGCGACACTTAAAAATGTAGCAAACTTAAATCTTGAGGACAATTTAATTTAACTTCCATCTTT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 178197 398 - 10971483 --------aA---ATATTTCTGTCTTAATGGCTCTAACAAAGAAGTGCTA-TTTTGGGGATATATACAATGGTGTGCTGTTCTGGAATGACACA-AAAATACTTATAAGAAGAAGGGAATGAATATGTCAGTATGTTTTCAAAAGCAAGTG-AGCCCAAGTTTTTAAACAAGCATAATTTTAGAG-TTTTTGTAACTAACTTAGGGTTTTAAATGTGGCAAAAATTTTAA-ACATTATCAA----GAATATACAGAAAATTTTAATCAATGTGGTTTCCATGATGAATTTACATGCTTAAATTCCTAATTTCAATC-TGTTGCTAGATATGAGAAAG-TTCGAAATTTTGAAGAAGC-AAGTGACACTTACAAATGTAGCAAACTTAAATCTTGAGGACAATTTAATTTAACTT-CATCTTT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32807278 389 - 50472720 tggccCAAAA---ATATT--TGTCTTAATGGTTTTAACAAAGAAGTGCTG-TTTTGGGCATATACATAATAGTGTGCTGTTTTGGGGTGACATA-AAAATAATCATAAGAAGAATGGAATGAATATGTCAGCATGTTTTTAAAAGCAAGTT-AGCTCAAGTTTTTAAAGGAGCATGATTTTAGAG-TTTTCA-GACTAACTTGGGG-TTTAAATATAG-CAAAAAATTAA-ACATTATTAT----GAATAAACAGAAAATTTTAATCAATTTGGTTTCCATGATAAATTCACATGCTTAAATTTCAAATTTCAATC-TGCTGCTAGATGTGAGAAAG-TTTGACATTTTGAAGAAAC-AAGCAGTGCTT-------------ACTTAAATTTTGAGGACAATTTAATTTAACTTCTATTTTT i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11015283 389 - 13128814 tggccCAAAA---ATATTTCTGTCTTAATGGTTTTAATAAAGAAGTGCTG-TTTTGGGGATATACATAATGGTGTGCTGTTTTGGGGTGACATA-AAAATAATCATAAGAAGAATGGAATGAATATGTCAGCATGTTTTTAAAAGCAAGTT-AGCTCAAGTTTTTAAAGGAGCATGATTTTAGAG-TTTTCG-AACTAACTTGGGG-TTTAAATGTAGCCAAAAAATTAG-ACATTTTTAT----GAATACACAGAAAATTTTAATCAATTTGGTTTCCATGATAAGTTCACATGCTTAAATTTCAAATTTCAATC-TGCTGCTAGATGTGAGAAAG-TTTAAAACTTTGAAGAAGC-AAGTAGTGCTT-------------ACTTAAATTTTGAGGACAATTTAATTT---TTCCATTTTT i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7756469 391 + 14377064 tggccCAAAA---ATATTTCTGTCCTAATGGTTTTAACAAAGAACTGCTG-TTTTGGGGATATACATAATGGTGTGCTGTTTTGGGGTGACATA-AAAATAATCAGAAGAAGAATGGAATGAATATGTCAGCATGTTTTTAAAAGCAAGTT-AGCTCAAGTTTTTGAAGGAGCATGA-TTTAGAG-TTTTCG-AACTAACTTGGAG-TTTAAATATAGCAAAAAAATTAA-ACATTATTAT----GAATACACAGAAAATTTTAATCAATTTGGTTTCCATGATAAATTCACATGCTTAAATTTCAAATTTCAATC-TGCTGCTAGATGTGAGAAAG-TTTGAAATTTTGAAGAAGC-AAGTAATGCTT-------------ACTTAAATTTTGAGGACAATTAAATTTAACGTCCATTTTT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4218128 384 - 9889416 tagccCAAAA---ATATTTCTGTCTTAATGGTTTTAACAAAGAAGTGCTG-TTTTGGGGATATACATAATGGT-TGCTGTTTTGGGGTGATATATAAAATAATCAT---AAGAATGGAACGAATATGTCAGCACG-TTTTAAAAGCAAGTT-AGCTCAAGTTTT----AAAGCATGATTTTAGAG-TTTTCG-AACTAACTTTGGG-TTTAAATATAGCAAAAAATTTAA-ATATTATTAT----GAATACACAGAAAATTTTAATGAATTTGGTTTCCACGATAAATTCACATGCCTAAATTTCAAATTTCAATC-TGCTGCTAGATGTGAGAAAG-TTTGAAATTTTGAAGAAGC-ATGTAGTGCTT-------------ACTTAAATTTTAAGGACAGTTTAATTTTAATTCCATTTTT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20841051 405 + 38779656 TTATTCACAA---ATATTTC-ATCATACTGGCTTT----AAGGAGTGCTACTTTTTGGTATATAAATAAAGATATGCTTTGGGGGAACATGATA-TGAATAATTA----AAGAATGCAATGAATATGTCACTATGTTACCAATAGCAAGTT-TACCAGAGTTTTTGACTGAGCATTATTTTAGTG-TTTTTGTTACTAAGATAGGG-TTTAAATAAAGTAATAATTTTTT-AACTTTTTATCGCAAAATACACAGAAAGTTCTAATAAATTTGGTTACCATGATGTGTTCACGTGTTTAGATTTCATACTGAAACCTTGATGTCAGATTTAATAAAACTCTGACATTTTGAAGAAGCAAAGAAAAGCTCATTCATGTAGAAAACTTAAATGTTGAGGATGATTCAATTTATCTTTCATTTTT i otoGar3.GL873528 I 406 I 475 s canFam3.chr31 28877123 366 - 39895921 ---TCTTAAATACATATTCTTATCTTAATGGCTTTAATAAAGATGTGCTA-TTT-----------------------TTTTCTGG---TACTTA-ATAATGATAATAATAAGAATGAAATGTATATGTCAGC-TGTTTCCAGAAACAAGTT-TTTCATAATTTTTGAATTAGTGTTATTTTCCTGATTTTTGCAACTAATTTAGGG-TTTAAATATAGTAAAATTTTCAATATGTTATTGT----GAATACACAGAGAATTTTAATCAGTTTGGTTCCCATTAT-TATTTACATGATGAAATTCCAACC------C-TGATGCTAGATGTAAGAAAT-TTTGAAATTTCAAAGA--C-CAGTGGAGATCATG-----AGCAAACTTAAATTTTGAGGATAAATCAAATTATGCTTCTTTTC- i canFam3.chr31 C 0 C 0 a score=3435371.000000 s hg38.chr22_KI270732v1_random 40109 292 + 41543 ATGACCAGATTTTGGGTCAGCTA---------------------------TTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCATGAAATAATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCAGGTTCTCAAATTCTGCCATCTTGGAATCATTGCAAGTAATTATACCAAGACAATATCTTGTATTTTGTATTTCATTGTTACACGTCCAATTT----------TTCTCTAGAGATATCAGAGAAAACCTACTCAAGAA-----GGAAA-------- s panTro5.chr20 36387214 292 - 66533130 ATGACCAGATTTTGGGTCAGCTA---------------------------TTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTAATGATCTTCACCATGAAATAATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGACCACTTTGTTGTGCTATTTAGTAAGTTCTCAAATTCTGCCATCTTGGAATCATTACAAGTAATTATACGAAGACAATATCTTGTATTTTGTATTTCATTGTTACACATCCAGTTT----------TCCTCTAGAGATATCAGAGAAAACCTACTCAAGAA-----GGGAA-------- i panTro5.chr20 C 0 C 0 s panPan2.chr3 77930768 292 + 205426864 ATGACCAGATTTTGGGTCAGCTA---------------------------TTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGGTCTTCACCATGAAATAATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCAAGTTCTCAAATTATGCCATCCTGGAATCATTACAAGTAATTATATGAAGACAATATCTTGTGTTTTGTATTTCATTGTTACACATCCAAGTT----------TTCTCTAGAGATATCAGAGAAAACCTACTCAAGAA-----GGGAA-------- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91002 292 + 12760026 ATGAACAGATTTTGGGTCAGCTA---------------------------TTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCATGAAATAATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCAAGTTCTCAAATTCTGCCATCTTGGAATCATTACAAGTAATTATACAAAGACAATATCTTGTATTTTGTATTTCATTGTTACACATCCAATTT----------TTCTCTAGAGATATCAGAGAAAACCTGTTCAAGAA-----GGGAA-------- i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20262777 292 + 20583478 ATGACCAGATTTTGGGTCAGCTA---------------------------TTAGGCATTCCAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCATGAAATAATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTGTTTAGCAAGTTCTCAAATTATGCCATCTTGGAATCATTACAAGTAATTGTACAAAGACAATATCTTGTATTTTGTATTTCACTCTTACACATCCAGTTT----------TTCTCTAGAGATATCGGAGAAAACCTACTCAAGAA-----GGGAA-------- i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 10728 292 - 27701 ATGACCAGATTTTGGGTCAGCTG---------------------------CTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCATGAAATAATATATAAGGTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCAGGTTCTCAAATTATGCCATCTTGGAATCATTACAAGTAATTATATGAAGACAATATCTTGTGTTTTGTATTTCATTGTTACACATCCAATTG----------TTCTCTAGAGATATCAGAGAAAACCCACTCAAGAA-----GGGAA-------- i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367087 309 - 204787373 ATGACCAGATTTTGGGTCAGCAAGTGGCCCAAAGTCTTATTGGGAATGCTTTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCGTGA---AATAC-----TTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCGAGTTCTCAA--TATGCCATCTTGGAGTCATTACAAGTAATGATACTAAGATAATATCTTGTATTTTGTATTTCATTGTTACACATCCAGTTT----------TTCTCTAGAGATATCAGAGAAAACCCATTCAAGAA-----AGGAA-------- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 268897 309 - 192460366 ATGACCAGATTTTGGGTCAGCAAGTGGCCCAAAGTCTTATTGGGAATGCTTTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCGTGA---AATAC-----TTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCGAGTTCTCAA--TATGCCATCTTGGAGTCATTACAAGTAATGATACTAAGATAATATCTTGTATTTTGTATTTCATTGTTACACATCCAGTTT----------TTCTCTAGAGATATCAGAGAAAACCCATTCAAGAA-----AGGAA-------- i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 287344 309 - 11645122 ATGACCAGATTTTGGGTCAGCAAGTGGCCCAAAGTCTTATTGGGAATGCTTTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCGTGA---AATAC-----TTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCGAGTTCTCAA--TATGCCATCTTGGAGTCATTACAAGTAATGATACTAAGATAATATCTTGTATTTTGTATTTCATTGTTACACATCCAGTTT----------TTCTCTAGAGATATCAGAGAAAACCCATTCAAGAA-----AGGAA-------- i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 268778 314 - 6739814 ATGACCAGATTTTGGGTCAGCAATTGGCCCAAAGTCTTATTGGGAATGCTTTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCGTGA---AATACTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCGAGTTCTCAA--TATGCCATCTTGGAGTCATTACAAGTAATGATACTAAGATAATATCTTGTGTTTTGTATTTCGTTGTTACACATCCAGTTT----------TTCTCTAGAAATATCAGAGAAAACCCATTCAAGAA-----GGGAA-------- i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 159411 317 - 101219884 ATGACCAGATTTTGGGTCAGCGATTGGCCCAAAATCTTATTGGTAATGCTTTAAGCATTCAAAAAATAAAATCTGGTAATATCTGGCAATTCCAATTTTCAGTTTTTTTGATCTTCACCGTGAAATAATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCAAGTTCTCAG--TATGCCATCTTGGAGTCATTACAAGTAATTATACTAAGATAATATCTTGTGTTTTGTATTTCATTGTTACACATCCAGTTT----------TTCTCTAGAGATATCAGAGAAAACCTATTCAGGAA-----GGGAA-------- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 279379 314 - 785044 ATGACCAGATTTTGGGTCAGCAATTGGCCCAAAATCTTATTGGGAATGCTTTAAGCATTCAAAAAATAAAATCTGATAATATCTGGCAATTCCAATTTTCAATTTTATTGATCTTCACCATGA---AATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCGAGTTCTCAA--TATGCCATCTTGGAGTCATTACAAGTAATGATACTAAGATAATATCTTGTGTTTTGTATTTCATTGTTACACATCCAGTTT----------TTCTCTAGAGATATCAGAGAAAACCTATTCAAGAA-----GGGAA-------- i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 178595 317 - 10971483 ATGACCAGATTTTGGGTCAGCGATTGGCCCAAAATCTTATTGGGAATGCTTTAAGCATTCAAAAAATAAAATCTGAGAATATCTGGCAATTCCAATTTTCAGTTTTATTGATCTTCACCATGAAATAATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTTTGTTGTCCTATTTAGCAAGTTCTCAA--TATGTCATCTTGGAGTCATTACAAGTAATTATACTAAGACAATATCTTGTGTTTTGTATTTCATTGTTACACATCCAGTTT----------TTCTCTGGAGATATCAGAGAAAACCTATTCAAGAA-----GGGAA-------- i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32807667 290 - 50472720 ATGACCAGATTT-GGGTCTGCTA---------------------------TTAAGAATTCAAAAAATAGAACCTGATAATATCTGGAAATTCCAATTTTCAGTTTTATTGATCTTCACCATGAAATAATATTTAAGTTAAGGGGCAAAATTTTGGAAAAGCAGATCACTCTGTTGTCCTATTTAGCAAGTTCTCAAGTTATGTCATCTTGGAATCATTATAAGTAATTATACTAAACCAATGTCTTGTGTTTTATATGTCATT-TTACACATTGAATTT----------TTTTCTAGAGATACTAGAAAAAACCTATTCAAGAA-----GGGAA-------- i calJac3.chr21 C 0 I 16 s saiBol1.JH378168 11015672 291 - 13128814 ATGACCAGATTT-GGGTCGGCTA---------------------------TTAAGAATTCAAAAAATAGAACCTGATACTATCTGGAAATTCTAATTTTCAGTTTTATTGATCTTCACTATGAAGTAATATTTAAGTTGAGGGGCAAAATTTTGGAAAAGCAGATCACTCTGTTGTCCTATTTAGCAAGTTCTCAAGTTATGTCATCTTGGAATCATTACAAGTAATTATACTAAACCAATCTCTTGTGTTTTATATTTCATTGTTATACATCTAATTT----------TTTTCTAGAGATACTAGAGAAAGCCTATTGAAGAA-----GGGAA-------- i saiBol1.JH378168 C 0 I 16 s cebCap1.NW_016107322v1 7756860 290 + 14377064 ATGACCAGATTT-GGGTCGGCTA---------------------------TCAAGAATTCAAAAAATAGAACCTGATAATATCTGGAAATTCCAATTTTCAGTTTTATTGATCTTCACGATGAAATAATATTTAAGTTAAGGGGCAACATTTTGGAAAAGCAGATCACTCTGTTGTCCTATTTAGCAAGTTCTCAAGTTATGTCATCTTGGAATCATTACAAGTAATTATGCTAAACAAATCTCTTGTGTTTTATATTTCATTGTTACACATCT-ATTT----------TTTTCTAGAGATACTAGAGAAAACCTATTCAAGAA-----GGGAA-------- i cebCap1.NW_016107322v1 C 0 I 42 s aotNan1.NW_018487195v1 4218512 290 - 9889416 ATGACCAGATTT--GGTCAGCTA---------------------------TTAAAAATTCAAAAAATAGAACCTGATAATATCTGGAAATTCCAATTTTCAGTTTTATTGATCTTCACCATGAAATAATATTTAAGTTAAGGGGCAAATTTTTGGAAAAGCAGATCACTCTGTTGTCCTATTTAGCAAATTCTCAAGTTATGTCATCTTGGAATCATTACAAGTAATTATACTAAACCAATCTCTTGTGTTTTATATTTCATTGTTACACATCTAATTT----------TTCTCTAGAGATACTAGAGAAAACCTATTCAAGAA-----GGGAA-------- i aotNan1.NW_018487195v1 C 0 I 16 s otoGar3.GL873528 20841931 242 + 38779656 TTAACAAGATTTTGGGTCAGATC---------------------------TTAAGCATTCaaataataaaatataataattCCCACCAATTATAATTTTTAGTTTCG-TGATCTCCACCATGAAAT--TGTTTCAATAAAGGGGCAAAATTTTGAAAAAA-ACATCATTTCATTGTCCCTTTTAGCAAATTCTTAAATTACATTGTCTTAGAATCATTG--------------------------------------------------CATCCAATTT----------TTCTCTAGAGAGATCGGAGAAAAACTAACCAAGAATGG-CTGGAA-------- i otoGar3.GL873528 I 475 I 1 s canFam3.chr31 28877489 307 - 39895921 ATGACCAGATTTTGGGTTAGATA---------------------------TTAAGCATTCAAAAAATAAAATCTGATAATATTCAGCAGTTACAATCTTCAGTTTCA-CGATCTCCATTGTAAAATGATGTCTTGGTGAAGGGACCAGAATTTTGAAAAGTAAATCATTTGATTATCCTATTTTGCAAGCTGTTAAACTATATTATCTTGGAATCAT---ATTTAATTATACTAAGCCGATCACCTGTATTTTGTGC----CTGTCACACAACTTTTTTTTTTTTTTTCTTTTCTAGAGAGCTAGGAAAAAAGTTTTTAAGGGATGGTTGGGTAGATGGATG i canFam3.chr31 C 0 C 0 a score=142349.000000 s hg38.chr22_KI270732v1_random 40401 20 + 41543 -----------GGTTAGA--------------TAAACAGCCC--TCT s panTro5.chr20 36387506 20 - 66533130 -----------GGTTAGA--------------TAAACAGCCC--TCT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931060 20 + 205426864 -----------GGTTAGA--------------TAAACAGCCC--TCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91294 20 + 12760026 -----------GGTTAGA--------------TAATCAGCCC--TCT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20263069 20 + 20583478 -----------GGTTAGA--------------TAAACAGCCC--TCT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 11020 20 - 27701 -----------GGTTAGA--------------TAAACAGCCc--tct i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367396 18 - 204787373 -----------GGTTAGA--------------TAAACAGCCT----T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 269206 18 - 192460366 -----------GGTTAGA--------------TAAACAGCCT----T i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 287653 18 - 11645122 -----------GGTTAGA--------------TAAACAGACT----T i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269092 18 - 6739814 -----------GGTTAGA--------------TAAACAGCCT----T i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 159728 20 - 101219884 -----------GGTTAGA--------------TAAACAGCCT--TCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 279693 20 - 785044 -----------GGTTAGA--------------TAAACAGCCT--TCT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 178912 22 - 10971483 -----------GGTTAGA--------------TAAACAGCCTTCTCT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32807973 20 - 50472720 -----------GGATAGA--------------TAAACTGTGc--tct i calJac3.chr21 I 16 I 36 s saiBol1.JH378168 11015979 20 - 13128814 -----------GGATAGA--------------TAAATTGTGC--TCT i saiBol1.JH378168 I 16 I 2 s aotNan1.NW_018487195v1 4218818 20 - 9889416 -----------GGATAGA--------------TAAACTGTGc--tct i aotNan1.NW_018487195v1 I 16 I 8 s otoGar3.GL873528 20842174 34 + 38779656 -----------GATGAGAATAAAGATTTCCCCTACGCACCCC--CCC i otoGar3.GL873528 I 1 I 9 s canFam3.chr31 28877796 31 - 39895921 GGTAGGTGGGAAGATAGA--------------TAAATAATTC--TCT i canFam3.chr31 C 0 C 0 e cebCap1.NW_016107322v1 7757150 42 + 14377064 I a score=5732510.000000 s hg38.chr22_KI270732v1_random 40421 464 + 41543 CTCT------------GTCTTTGCCTCCATTTGGTT----------------CCTTCCAATTGTTTCCCAGTGCATTTCAAAGTTACTTTTATTGTTCTCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTATGTAATTCTTTTGACAGCTGAAGGTGGT-ATCCGACTTTGAATTAAAGG----------TTTACAGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAATTATTTTCATTTGATAATTGAATATGGCTTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGAA-----------TGTGTATTCCAAGAGACATGACCTTAAAATATCATCAAGCTAAGTAGCAGTG-AAATTGAACTCTGCTGTATTACAGAAGTC--AGTGTTTCT s panTro5.chr20 36387526 468 - 66533130 CTCT--C------TCTGTCTTTGCCTCCATTCGGTT----------------CCTTACAATTGTTTCCCGGTGCATTTCAAAGTTACTTTTATTATTCCCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGTGTAATTCTTTTGACAGCTGAAGGTGGT-ATCCGACTTTGAATTAAAAG----------TTTGTAGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACTAA-TAAGGAATAATCATTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAATTATTTTCATTTGATAATTGAATATGGCTTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGAA-----------TGTGTATTCCAAGAGACATGACCTTAAAATATCATCAAGCTAAGTAGTAGTG-AAATTGAACTCTGCTGTATTATAGATGTC--AGTGTTTCT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931080 473 + 205426864 CTCTTTC------TCTGTCTTTGCCTCCATTCGGTT----------------CCTTACAATCGTTTCCTAGTGCATTTCAAAGTTACTTTTATTGTTCCCTTCATTTTCTCTTTTCATTCCAGTAAATTTAAGTTGATTTGTATAATTCTTTTGGGAGCTGAAGGTAGT-ATCTGACTTTGAATTAAAGG----------TTTACAGCTACAGCTTTT-AATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAATTATTTTCATTTGATAATTGAATATTGCTTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGAA-----------TGTGTATTCCAAGAGACATGACCTTAAAATATCATCAAGTTAAGTAGTAGTG-AAATTGAACTCTGCTGTATAATAGAAGTC--AATGTTTCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91314 447 + 12760026 CTCT--C------TCTGTCTTTGCCTCCATTCGGTT----------------CCTTACAATTGTTTCCCAGTGAATTTCAAAGTTACTTTTATTGTTCTCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGTGTAATTCTTTTGACAGCTGAAGGTGGT-ATCC-ACTTTGAATTAAAGG----------TTTACAGCTACAGCTTTTCAAC-------------------TGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAATTATTTTCATTTGATAATTGAATATGGCTTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGAA-----------TGTGTATTCCAAGAGACATGACCTTAAAATATCACCAAGCTAAGTAGTAGTG-AAATTGAATTCTGC-GTATGATAGAAGTC--AGTGTGTCT i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20263089 471 + 20583478 CTCTCTC------TCTGTCTTTGCCTCCATTCAGTT----------------CCTTGTAATCGTTTCCCAGTGCATTTCAAAGTTACTTTTATTGTTCCATTCATTTTCAT-TTTCATTCCAG-AAATTTAAGTGA--TTGTATAATTCTTTTGACAGCTGAAGGTAGT-ATCCAACTTTGAATTAAAGG----------TTTACAGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAGTTAAGAAATAATCACTTTGAAAAACCTTGATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAATTACTTTCGTTTGATCATTGAATATTGCTTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGAA-----------TGTGTATTCCAAGAGACATGACCTTAAAATATCATCAAGCTAAGTAGCAGTG-AAATTGAACCCTGCTGTATAATAGAAGTC--AGTGTTTCT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 11040 476 - 27701 ctctctctctctgtctgtctTTGCCTCCATTTGGTT----------------CCTTATGTTCATTTCTCAGTGCATTTCAAAGTTACTTTTATTGTTCCCTTCATTTTCTC-TTTCATTCCAG-AAGTTTAAGTGA--TTGCATAATTCTTTTGACAGCTGAAGGTAGT-ATCCGACTTTGAATTAAAGG----------TTTACAGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTCTGAGTTTTAACATCTTAGGATCGCGACCAG-TAAGGAATAATCACTTTGAAAAACCTTGATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAATTATTTTCATTTGATAATTGAATATTGCTTCAAGAGAGGTGGGCTCAGACATTTGGCAATGAATATTGAA-----------TGTGTATTCCAAGAGACATGACCTTAAAATATCATCAAGCTAAGTAGTAGTG-AAATTGAACTCTGCTGTATAATAGAAGTC--AGTGTTTCT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367414 456 - 204787373 CTCT--C------TCTGTCTTTGCCTCCATTCGGTC----------------CCTTACAATCATTTCCCAGTGCATTTCAAAGTGACTTTTATTGTTCCCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGTGTAATTCTTCTGACAGCTGAAGGTAGT-ATGCGACTTTGAA------------------TTACAGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGTTT-GGTAAACTATTTTCATTTGATAATTGAATATTGCATCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGA---------------GTATTCCAAGAGGCATGACCTGAAAATATCATCAAGCTAAGTGGGAGTG-AAATTGAACTCTGCTGTATAATAGAAGTC--AGTGTTTTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 269224 464 - 192460366 CTCT--C------TCTGTCTTTGCCTCCATTCGGTC----------------CCTTACAATCATTTCCCAGTGCATTTCAAAGTGACTTTTATTGTTCCCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGTGTAATTCTTCTGACAGCTGAAGGTAGT-ATGCGACTTTGAATTAAAGG----------TTTACGGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAACTATTTTCATTTGATAATTGAATATTGCATCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGA---------------GTATTCCAAGAGGCATGACCTGAAAATATCATCAAGCTAAGTGGGAGTG-AAATTGAACTCTGCTGTATAATAGAAGTC--AGTGTTTTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 287671 464 - 11645122 CTCT--C------TCTGTCTTTGCCTCCATTCGGTC----------------CCTTACAATCATTTCCCAGTGCATTTCAAAGTGACTTTTATTGTTCCCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGTGTAATTCTTCTGACAGCTGAAGGTAGT-ATGCAACTTTGAATTAAAGG----------TTTACGGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAACTATTTTCATTTGATAATTGAATATTGCATCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGA---------------GTATTCCAAGAGGCATGACCTGAAAATATCATCAAGCTAAGTGGGAGTG-AAATTGAACTCTGCTGTATAATAGAAGTC--AGTGTTTTT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269110 464 - 6739814 CTCT--C------TCTGTCTTTGCCTCCATTTGGTC----------------CCTTACAATCATTTCCCAGTGCATTTCAAAGTGACTTTTATTGTTCCCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGCGTAATTCTTCTGACAGCTGAAGGTAGT-ATGCGACTTTGAATTAAAGG----------TTTACGGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAACTATTTTCATTTGATAATTGAATATTGCGTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGA---------------GTATTCCAAGAGGCATGACCTGAAAATATCATCAAGCTAAGTGGGAGTG-AAATTGAACTCTGCTGTATAATAGAAGTC--AGTGTTTTT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 159748 464 - 101219884 CTCT--C------TCTGTCTTTGCCTCCATTCGGTC----------------CCTTGCAATCATTTCCCAATGCATTTCAAAGTTACTTTTATTGTTCCCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGTGTAATTCTTCTGACAGCTGAAGGTAGT-ATGCGACTTTGAATTAAAGG----------TTTAAGGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAACTATTTTCATTTGATAATTGAATATTGCGTCAGGAGAGGTGAGCTCAGATATTTGGCAATGAATATTGA---------------GTATTCCAAGAGGCATGACCTGAAAATATCATCAAGCTAAGTAGGAGTG-AAATTGAACTCTGCTGTATAATAGAAGTC--AGTGGTTTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 279713 464 - 785044 CTCT--C------TCTGTCTTTGCCTCCATTTGGTC----------------CCTTACAATCATTTCCCAGTGCATTTCAAAGTAACTTTTATTGTTCCCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGCGTAATTCTTCTGACAGCTGAAGGTAGT-ATGCGACTTTGAATTAAAGG----------TTTACGGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAATAATCACTTTGGAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTAAACTATTTTCATTTGATAATTGAATATTGCGTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGA---------------GTATTCCAAGAGGCATGACCTGAAAATATCATCAAGCTAAGTGGGAGTG-AAATTGAACTCTGCTGTATAATAGAAGTC--AGTGTTTTT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 178934 464 - 10971483 CTCT--C------TCTGTCTTTGCCTCCGTTCGGTC----------------CCTTGCAATCATTTCCCAGTGCATTTCAAAGTTACTTTTATTGTTCCCTTCATTTTCTC-TTTCATTCCAG-AAATTTAAGTGA--TTGTGTAATTCTTCTGATAGCTGAAGGTAGT-ATGCAACTTTGAATTAAAGG----------TTTACGGCTACAGCTTTTCAATTAGAAAATCTCAGATCATGTGATCTATGAGTTTTAATATCTTAGGATCACTACCAG-TAAGGAACAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTGTGTTTTGTGAGG-TTGCTT-GGTCAACTATTTTCATTTGATAATTGAATATTGCGTCAAGGGAGGTGAGCTCAGACATTTGGCAATGAGTATTGA---------------GCATTCCAAGAGACATGACCTGAAAATATCATCAAGCTAAGTAGGAGTG-AAATTGAACTCTGCTGTATGATAGAAGTC--AGTGTTTTT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32808029 479 - 50472720 ------c------tctctctctGCCTTAATTCAGTGCATTACGGTATCTCTGCCTTACAATCATTTCCCAGTGCATTTCAAAGTTATTTTTATAGTTCCCTGCATTTTCTC-TTTTATTCCAG-CAATTTAAGTGA--CTGTATAATTCTTTTGATAGCTGAAGGTAAT-ATCCATCTTTGAATTAAAGG----------TTTACAGCTACA-CATTTCAATTAGAGAATCTCAGATCATGTAATCTGTGAGTTTTAATATCTTTGGATCACTACCAA-TAAGGAGTAATCACTTTGAAAAAACTTAATGCTACCTAGAGTTTATGTTTTTTGAGG-ATGCCT-GGTAAATTATTTTCATTTGATAATTGAATGTTGCTTCAAGTGAGGTGAGCTCAGAAATTTAGCAATGAATATTAAA-----------TGTGGATCCCAAGAGGCATGACCTTAAAATATCATCACGCTAAGTAGTAGTG-AAATTGAACCCTGCTGTATAATACAAGTA--AATGTTTCT i calJac3.chr21 I 36 C 0 s saiBol1.JH378168 11016001 479 - 13128814 ------C------TCTCTCTCTGCCTTCATTCAGTGCATTATAGTATCTCTGCCTTACAATTATCTCCCAGTGTATTTCAAAGTTATTTTTATTGCTCCCTTCATTTTCTC-TTTTAATCCAG-CAATTTAAGTGA--TTGTATAATTCTTTTGATAGCTGAAGGTAAC-ATCCATCTTTGAATTAAAGG----------TTTGCAGCTACA-CATTTCAGTTAGAGAATCTCAGATCATGTGATCTGTGAGTTTTAATATATTTGGATCACTACCAG-TAAGTAATCGTCACTTTGAAAAACCTTAATGCTACCTAGAGTTTATGTTTTTTGAGG-ATGCCT-GGTAAATTATTTTCATTTGATAATTGAATATTGCTTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGAA-----------TGTGGATCCCAAGAGACATGACCTTAAAATATCATCAAGCTAAGTAGTAGTG-AAATTGAACTCTGCTGTATAATTCAAGTT--ACTGTTTCT i saiBol1.JH378168 I 2 C 0 s cebCap1.NW_016107322v1 7757192 489 + 14377064 ------C------TCTCTCTTTGCCTTCATTCAGTACATTACAGTATCTCTGCCTTACAATCATTTCCCAGTGCATTTCAAAGTTATTTTTATTGTCCCCTTCATCCTCTC-TTTTATTCCAG-CAATTTAAGTGA--TTGTATAATTCTTTTGATAGCTGAAGGTAAT-ATCCATCTTTGAATTAAAGGTTTACAGCTATTTACAGCTACA-CATTTCAATTAGAGAATCTCAGATCATGTGATCTGTGAGTTTTAATATCTTTGGATCACTACCAG-TAAGGAATAATCACTTCGAAAAACCTTAATGCTACCTAGAGTTTATGTTTTTTGAGG-ATGCCT-GGTAAATTATTTTCATTTGATAATTGAATATTGCTTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGAA-----------TGTGGATCCCAAGAGACATGACCTTAAAATATCATCAAGCTAAGTAGTAGTG-AAATTGAACTCTGCTGTATAATACAAGTC--ATTTTTTCT i cebCap1.NW_016107322v1 I 42 C 0 s aotNan1.NW_018487195v1 4218846 478 - 9889416 ------c------tctctctctGCCTTCATTCAGTGCATTACAGTATCTCTGCCTTACAATCATTTCCCAGTGCATTTCAAAGTTATTTTTATTGTTCCCTTCATTTACTC-TTTTATTCCAG-CAATTTAAGTGA---TGTATAATTCTTTTG-TAGCTGATGGTAATAATCCATCTTTGAATTAAAGG----------TTTACAGCTACA-CATTTCAATTAGAGAATATCAGATCATGTGATCTGTGAGTTTTAATATCTTTGGATCACTACCAG-TAAAGAATAATCACTTTGAAAAACCTTAATGCTACCTAGAGTTTATATTTTTTGAGG-AGGCCT-GGTAAATTATTTTCATTTGATAATTGAATATTGCTTCAAGAGAGGTGAGCTCAGACATTTGGCAATGAATATTGGA-----------TGTGGATCCC-AGAGACGTGACCTTAAAATATCATCAAGCTAAGTAGTAGTGAAAATTGAACTCTGCTGTATAATACAAGTC--AATGTTTCT i aotNan1.NW_018487195v1 I 8 C 0 s otoGar3.GL873528 20842217 459 + 38779656 ------C------TCCATCTTTTCTTCCTTCCAGTC----------------CCTCACAATATTTTCCTAGTGCATTTCAAAGTTATTTTTATTGTTTTCTTTATTTTCTT-TTTCATTCAAT-AAATTTAAGTGC--TTGTATAATTTTATCAGTGACTGGAGATAAT-ATCCCACTTTGAATTGAAGG----------TGTATAGCTAAAGCTTTTCAATTAGAAAATCTCTGATTGTGTGATCTATGAGGTATAACATCCTAGGATCAATACTGG-TCAAGAATAATCACCTTTTAAAACCTTAATACTACCTAGAGTTTAGTTTTTTAGAGGTTTTCTT-GGTAAATTATTTTCATCTTATGATTAAATATGGTTTTAAAAGAGGTGACCTCAGATATTTGGCAGT---TATT--------------TGTGTATCCCAAGAGATATGACCATAAAATATTATCAAGCGAAGTAGTAGTA-AAATTGAACTCTAGTATATAATAGAAGCC--AATGTTTCT i otoGar3.GL873528 I 9 C 0 s canFam3.chr31 28877827 465 - 39895921 ------C------TCCATCTCTTTCTCT------TT----------------CCTTTGAAATATTTTCCATTGTGTGCCAAAAGTATTATTTT--TTTCCTTCATTTTTTG-TTTCA-TCAAG-AAATTTAAGTGA--TTGTGTCATTCTGTCAGTAAATGAAG--CAT-ATCCAATTGTGAG-CAAAGA----------TTTATAGCTACACCTTTTCAATTTGAATTTCTCAGATCATGTGATCTATGACTTTTAATATTCTAGAATCATAATTAG-TAACAAAT-GTCAGCTCAAAGGAACTTAATTCTACCCCAAGTTTTTATTTTTCCAGG-TTGCTTGGGTAAATTGTTTTCATCTTATAATTGAATATTGTTTTAAGAGAGGTGAGCTCAAACATTTGGCAATCAATATTGAATGATGATTATTTGTGTATCTCAGGAGACTTGACCTTAAAATATCATCAAGCTAAGTAGTAGTG-AAATTGAACTCTGCTATCTAATAGAAGTCTTAATGTTTCC i canFam3.chr31 C 0 C 0 a score=6821.000000 s hg38.chr22_KI270732v1_random 40885 1 + 41543 -T s panTro5.chr20 36387994 1 - 66533130 -T i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931553 1 + 205426864 -T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91761 1 + 12760026 -T i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20263560 1 + 20583478 -T i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 11516 1 - 27701 -T i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367870 1 - 204787373 -T i rheMac8.chr2 C 0 C 0 s macFas5.chr2 269688 1 - 192460366 -T i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288135 1 - 11645122 -T i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269574 1 - 6739814 -T i cerAty1.NW_012001605v1 C 0 C 0 s papAnu3.chr2 210032 1 + 187378091 -T i papAnu3.chr2 N 0 I 4 s chlSab2.chr22 160212 1 - 101219884 -T i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280177 1 - 785044 -T i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 179398 1 - 10971483 -T i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32808508 1 - 50472720 -T i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11016480 1 - 13128814 -T i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7757681 1 + 14377064 -T i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219324 1 - 9889416 -T i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20842676 1 + 38779656 -T i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28878292 1 - 39895921 G- i canFam3.chr31 C 0 C 0 a score=43830.000000 s hg38.chr22_KI270732v1_random 40886 3 + 41543 ACA s panTro5.chr20 36387995 3 - 66533130 ACA i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931554 3 + 205426864 ACA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91762 3 + 12760026 ACA i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20263561 3 + 20583478 ACG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 11517 3 - 27701 ACA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367871 3 - 204787373 ACA i rheMac8.chr2 C 0 I 1 s macFas5.chr2 269689 3 - 192460366 ACA i macFas5.chr2 C 0 I 1 s macNem1.NW_012010856v1 288136 3 - 11645122 ACA i macNem1.NW_012010856v1 C 0 I 1 s cerAty1.NW_012001605v1 269575 3 - 6739814 ACA i cerAty1.NW_012001605v1 C 0 I 1 s chlSab2.chr22 160213 3 - 101219884 ACA i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012099043v1 280178 3 - 785044 ACA i manLeu1.NW_012099043v1 C 0 I 1 s colAng1.NW_012123820v1 179399 3 - 10971483 ACA i colAng1.NW_012123820v1 C 0 I 1 s calJac3.chr21 32808509 3 - 50472720 ACA i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11016481 3 - 13128814 ACA i saiBol1.JH378168 C 0 C 0 s cebCap1.NW_016107322v1 7757682 3 + 14377064 ACA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219325 3 - 9889416 ACA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20842677 3 + 38779656 ACA i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 28878293 3 - 39895921 GCA i canFam3.chr31 C 0 I 1 e papAnu3.chr2 210033 4 + 187378091 I a score=17290.000000 s hg38.chr22_KI270732v1_random 40889 1 + 41543 T s panTro5.chr20 36387998 1 - 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931557 1 + 205426864 T i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91765 1 + 12760026 T i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20263564 1 + 20583478 T i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chrUn_GL398098_1 11520 1 - 27701 T i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367875 1 - 204787373 T i rheMac8.chr2 I 1 C 0 s macFas5.chr2 269693 1 - 192460366 T i macFas5.chr2 I 1 C 0 s macNem1.NW_012010856v1 288140 1 - 11645122 T i macNem1.NW_012010856v1 I 1 C 0 s cerAty1.NW_012001605v1 269579 1 - 6739814 T i cerAty1.NW_012001605v1 I 1 C 0 s papAnu3.chr2 210037 1 + 187378091 T i papAnu3.chr2 I 4 I 345 s chlSab2.chr22 160217 1 - 101219884 T i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012099043v1 280182 1 - 785044 T i manLeu1.NW_012099043v1 I 1 C 0 s colAng1.NW_012123820v1 179403 1 - 10971483 T i colAng1.NW_012123820v1 I 1 C 0 s calJac3.chr21 32808512 1 - 50472720 T i calJac3.chr21 C 0 I 1 s saiBol1.JH378168 11016484 1 - 13128814 T i saiBol1.JH378168 C 0 I 1 s cebCap1.NW_016107322v1 7757685 1 + 14377064 T i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 4219328 1 - 9889416 T i aotNan1.NW_018487195v1 C 0 I 1 s otoGar3.GL873528 20842681 1 + 38779656 T i otoGar3.GL873528 I 1 C 0 s canFam3.chr31 28878297 1 - 39895921 T i canFam3.chr31 I 1 C 0 a score=576615.000000 s hg38.chr22_KI270732v1_random 40890 51 + 41543 CTTTATGATATA-TAAATATTTTTACATTGTGGTAGATAATAATTTGTATGG s panTro5.chr20 36387999 51 - 66533130 CTTTATGATATA-TAAATATTTTTACATTGTGGTAGATAATAATTTGTATGG i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931558 51 + 205426864 CTTTATGATATA-TAAATATTTTTACATTGTGGTAGATAATAATTTGTATGG i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91766 51 + 12760026 CTTTATGATATA-TAAATATTTTTACATTGTGGTAGATAATAATTTGTATGG i gorGor5.CYUI01015020v1 C 0 C 0 s ponAbe2.chr3_random 20263565 51 + 20583478 CTTTATGATATA-TAAATATTTTTACATTGTGGTAGATAATAATTTGTATGG i ponAbe2.chr3_random C 0 N 0 s nomLeu3.chrUn_GL398098_1 11521 51 - 27701 CTTTGTGATATA-TAAATATTTTTACATTGTGGTAGATAATAATTTGTATGG i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367876 51 - 204787373 CTTTATGACATG-CAAATATTTTTATATTGTGGTAGATAATCATTTGTATGG i rheMac8.chr2 C 0 C 0 s macFas5.chr2 269694 51 - 192460366 CTTTATGATATG-CAAATATTTTTATATTGTGGTAGATAATCATTTGTATGG i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288141 51 - 11645122 CTTTATGATATG-CAAATATTTTTATATTGTGGTAGATAATCATTTGTATGG i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269580 51 - 6739814 CTTTATGATATG-CAAATATTTTTATATTGTGGTAGATAATCATTTGTATGG i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160218 51 - 101219884 CTTTATGATATG-CAAATATTTTTATATTGTGGTAGATAATCATTTGTATGG i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280183 51 - 785044 CTTTATGATATG-CAAATATTTTTATATTGTGGTAGATAATCATTTGTATGG i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 179404 51 - 10971483 CTTTGTGATAAG-CAAACATTTTTATATTGCGGTAGATAATCATTTCTGTGG i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32808514 48 - 50472720 TTTTATGAAATG-TAAATATTTTTACATTGCAATAGATAA---TTTGCACGG i calJac3.chr21 I 1 C 0 s saiBol1.JH378168 11016486 51 - 13128814 CTTTATCAAATG-TAAATATTCTTACATTGCAATAGATAATATTTTGTATGG i saiBol1.JH378168 I 1 C 0 s cebCap1.NW_016107322v1 7757687 51 + 14377064 CTTTATGAAATG-TAAATATTTTTATATTGCAATAGATAATATTTTGTATGG i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 4219330 52 - 9889416 CTTTATGAAATGTTAAATATTTTTACATTGCAATAGATAATATTTTGTATGG i aotNan1.NW_018487195v1 I 1 C 0 s otoGar3.GL873528 20842682 50 + 38779656 CTTTACCAAAT--TAAAGACTTTTCTACTGAACTAGATAAGAATATATATGG i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28878298 51 - 39895921 CCTTATCAAACG-TAAAGAATTTTCCTTTGTGCTAGTTAACAATATATATGT i canFam3.chr31 C 0 C 0 e papAnu3.chr2 210038 345 + 187378091 I a score=559131.000000 s hg38.chr22_KI270732v1_random 40941 58 + 41543 AAAAATTTAATTGAATTTAATTTATCCTATGGCAGAATTATGTTACATGGGTCATTTT- s panTro5.chr20 36388050 58 - 66533130 AAAAATTTAATTGAATTTAATTTATCCTATGGCAGAATTATGTTACATGGGTCATTTT- i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931609 58 + 205426864 AAAAATTTAATTGAATTTAATTTATCCTATGGCAGAATTATGTTACCTAGGTCATTTT- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91817 58 + 12760026 AAAAATTTAATTGAATTTAATTTATCCTATGGTAGAATTATGTTACATGGGTCATTTT- i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 11572 58 - 27701 GAACATTTAATTGAATTTAATTTATCCTATGGCAGAATTATGTTACACAGGTCATTTT- i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367927 58 - 204787373 AAAAATTTAACTGAATTTAATTTATCGTATGGCAGAATTATGTTACATAGGTCATTTT- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 269745 58 - 192460366 AAAAATTTAACTGAATTTAATTTATCGTATGGCAGAATTATGTTACATAGGTCATTTT- i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288192 58 - 11645122 AAAAATTTAACTGAATTTAATTTATCGTGTGGCAGAATTATGTTACATAGGTCATTTT- i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269631 58 - 6739814 AAAAATTTAACTGAATTTAATTTATCGTATGGCAGAATTATGTTACATAGGTCATTTT- i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160269 58 - 101219884 AAAAATTTAACTGAATTTAATTTATCCTATGGCAGAATTATATTACATAGGTCATTTT- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280234 58 - 785044 AAAAATTTAACTGAATTTAATTTATCGTATGGCAGAATTATGTTACATAGGTCATTTT- i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 179455 58 - 10971483 AAAAATTTAACCGAGTTTAATTTATCCTATGGCAGAATTATGTTACATAGGTCATTTT- i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32808562 58 - 50472720 CAACATTTGTTTCAATTTAATTTACATTATGGCAGAAGTATGTTACAGAGGTCATTTT- i calJac3.chr21 C 0 C 0 s saiBol1.JH378168 11016537 48 - 13128814 CAA----------AACTTAATTTACATTATGGCAGAATTATGTTACAGAGGTCATTTT- i saiBol1.JH378168 C 0 N 0 s cebCap1.NW_016107322v1 7757738 58 + 14377064 AAAAATTTGATTCAATTTAATTTACATTATGGCAGAATTATGTTACAGAGGTCATTTT- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219382 56 - 9889416 CAA-ATTTAATTC-ATTTAATTTACATTATGGCAGAATTATGTTACAGAGGTCATTTT- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20842732 58 + 38779656 GAAAGTTTAATTGAATTTAATTGAGTCTATGGCAGAATTATATTACATAGGTAATTTT- i otoGar3.GL873528 C 0 I 7 s canFam3.chr31 28878349 41 - 39895921 --------------GTATAAGTTGGTCTGCAGCAGAATTAT-TTATGT---CCAGTTCT i canFam3.chr31 C 0 C 0 e papAnu3.chr2 210038 345 + 187378091 I a score=1906289.000000 s hg38.chr22_KI270732v1_random 40999 209 + 41543 AG--TTTTGGATTTAAGCATCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATACACACTCCCA--AACATTTGAAATCCTAACAGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGTCAGCTATTCTTAGAGATTACATG--------CATTCCCATAGCTTGAGAGGTTCACACTATAAGGTAAACAGAGAAAGTATTACAGCA s panTro5.chr20 36388108 209 - 66533130 AG--TTTTGGATTTAAGCATCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATACACACTCCCA--AACATTTGAAATCCTAACAGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGTCAACTATTCTTCAAGATTACCTG--------CATTCCCATAGCTTGAGAGGTTCACACTATAAGGTAAACAGAGAAAGTATTATAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931667 212 + 205426864 AGTTTTTTGATTTTAAGCGTCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATACACACTCCCA--AACATTTGAAATCCTAGCAGTCATTTCTAACAGCTTTTTTCCTACAAAAGAAGTCAACTATTCTTAGAGATTACATG--------CATTCCCATAGCTTGAGAGGTTCACACTATAAGGTAAACAGAGAAAGTATTACAGCA i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 91875 208 + 12760026 AG--TTTTGGATTTAAACATCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATACACACTCCCA--AACATTTGACATCCTAACAGTCATTTCTAACAGC-TTTTTCCTA-AAAAGAAGTCAGCTATTCTTAGAGATTACATG--------CATTCCCATAGCTTGAGAGATTCACACTATAAGGTAAACAGAGAAAGTATTACAGCA i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 11630 209 - 27701 AG--TTTTTGATTTAAGCATCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATACACACTCCCA--AACATTTGAAATCCTAACAGTCATTTCCAACAGC-TTTTTCCTACAAAAGAAGTCAGCTATTCTTAGAGATGACATG--------CATTCCCATAGCTTGAGAGGTTCACACTATAAGGTAAACAGAGAAAGGTTTACAGCA i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204367985 199 - 204787373 AG--TTTTTGATTTAAATGTCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATATACGCTCCCA--AACATTTGAAATCCTA--AGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGCCAGCTATTCTTAGAGATTACATG--------CATTCCCACAGCTTGAGAGGTTCAT--------GTAAACAGAGGAAGTATTACAGCA i rheMac8.chr2 C 0 C 0 s macFas5.chr2 269803 199 - 192460366 AG--TTTTTGATTTAAATGTCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATATACACTCCCA--AACATTTGAAATCCTA--AGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGCCAGCTATTCTTAGAGATTACATG--------CATTCCCACAGCTTGAGAGGTTCAT--------GTAAACAGAGGAAGTATTACAGCA i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288250 199 - 11645122 AG--TTTTTGATTTAAATGTCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATATACACTCCCA--AACATTTGAAATCCTA--AGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGCCAGCTATTCTTAGAGATTACATG--------CATTCCCACAGCTTGAGAGGTTCAT--------GTAAACAGAGGAAGTATTACAGCA i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269689 198 - 6739814 -G--TTTTTGATTTAAACGTCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATATACACTCCCA--AACATTTGAAATCCTA--AGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGCCAGCTATTCTTAGAGATTACATG--------CATTCCCACAGCTTGAGAGGTTCAT--------GTAAACAGAGGAAGTATTACAGCA i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160327 201 - 101219884 AG--TTTTTGAGTTAAACGTCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATATACACTTGCA--AACATTTGAAATCCTAACAGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGCCAGCTATTCTTAGAGATTACATG--------CATTCCCACAGCTTGAGAGGTTCAC--------GTAAACAGAGAAAGTATTACAGCA i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280292 199 - 785044 AG--TTTTTGATTTAAACGTCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACATGAATATACACTCCCA--AACATTTGAAATCCTA--AGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGCCAGCTATTCTTAGAGATTACATG--------CATCCCCACAGCTTGAGAGGTTCAT--------GTAAACAGAGGAAGTATTACAGCA i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 179513 201 - 10971483 AG--TTTTTGATTTAAACGTCTTAAAATTATAAATGCAAATATTCAACACATAAAACCCACACGAATATACACTCCCA--AACATTTGAAATCCTAACAGTCATTTCTAACAGC-TTTTTCCTACAAAAGAAGCCAGCTATTCTTAGAGCTTACATG--------CATTCCCACAGCTTGAGAGGTTCAC--------GTAAACAGAGAAAGTATTACAGCA i colAng1.NW_012123820v1 C 0 I 303 s calJac3.chr21 32808620 210 - 50472720 GG--TTTTTTATTTAAACTTCTTAAAATTATAAATGCAAATATTCAGCACAGAAAACCCATATTAATATACACTCCCA--AACATTTGAAATCCTAGCAATCATTTCTAACAACTTTTTTTCTACAAAAGAAGCCAGCTATTCTTAGAGATTACATG--------CATTCCCATAGCTTGACAGGTCCATACTATAAGGTAAACAGAGAATGTATTATAGCA i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7757796 207 + 14377064 GG--TTTTTGATTTAAACTTCTTAAAATTATAGATGCAGATATTCAACACAGAAAACCCATATGAATGTA---TTTCA--AACATTTGAAATCCTAGCAGTCATTTCTAACAGCTTTTTTCCTACAAAAGAAGCCAGCTGTTCTTAGAGATTACATG--------CATTCCCATAGCTTGAAGGGTTCATACTATAAGGTAAACAGAGAATATATTATAGCA i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219438 208 - 9889416 GG--TTTTTGATTTAAACTTCTTAAAATTATAAATGCAAATATTCAACACAGAAAA-CCATATGAATATACAATCCCA--AACATTTGAAATCCTAGCAGTCATTTCTAACAGCTTTTTTCCTACAAAAGAAGCCAGCTATTCTTAGAGATTACATG--------CATTCCCATAGCGTGAAAGGT-CATACTATAAGGTAAACAGAGAATGTATTATAGCA i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20842797 209 + 38779656 AG--TTTTTGATTCAAACTTCTGAAAATTATAAATGCAAGTATCCAACACTTGAAGCCCAAATGAACACACACACCTAGGAACATTTAAAATCCTAACAATC----CTAATAGC-TTTTTGCTATGAAATAAATCAGCCATTCCTAGAGATTATATGCAGTACACCACTCTCATAACTCGAAAGGGTCACACAATAT-TTGAACAATGAA-----TGCTGCA i otoGar3.GL873528 I 7 C 0 s canFam3.chr31 28878390 186 - 39895921 AG--TTTTTGTTTTAAAATTCTAAAA--TATAAATGCAAATATCCAATATTTAAAACTTCCATAAATATCCGTCCC----AACATTT-AAGTTCTAACAAAAATTTCTAAGAGC-TTCTTAAACAACAAAAAACCAGCAATTCTTAGACATTATATGCAATACACCATTTCCATAGCTTAAAAAATTCAT-----------------------GTTACA--- i canFam3.chr31 C 0 C 0 e papAnu3.chr2 210038 345 + 187378091 I a score=105853.000000 s hg38.chr22_KI270732v1_random 41208 10 + 41543 ATTTAAGAAT s panTro5.chr20 36388317 10 - 66533130 GTTTAAGAAT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931879 10 + 205426864 GTTTAAGAAT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 92083 10 + 12760026 GTTTAAGAAT i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 11839 10 - 27701 GTTTAAGAAT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204368184 10 - 204787373 GTTTAAGAAT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 270002 10 - 192460366 GTTTAAGAAT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288449 10 - 11645122 GTTTAAGAAT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269887 10 - 6739814 GTTTAAGAAT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160528 10 - 101219884 GTTTAAGAAT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280491 10 - 785044 GTTTAAGAAT i manLeu1.NW_012099043v1 C 0 C 0 s calJac3.chr21 32808830 10 - 50472720 GTTTAAGAAT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7758003 10 + 14377064 GTTTAAGAAT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219646 10 - 9889416 GTTTAAGAAT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20843006 10 + 38779656 ATTTAAGAAT i otoGar3.GL873528 C 0 C 0 s canFam3.chr31 28878576 10 - 39895921 GTTTAAGAAC i canFam3.chr31 C 0 C 0 e colAng1.NW_012123820v1 179714 303 - 10971483 I e papAnu3.chr2 210038 345 + 187378091 I a score=250875.000000 s hg38.chr22_KI270732v1_random 41218 26 + 41543 ACCAGTGGATTTACTTTAAAGACAAT s panTro5.chr20 36388327 26 - 66533130 ACCAGTGGATTAACTTTAAAGACAAT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931889 26 + 205426864 ACCAGTGGATTTACTTTAAAGACAGT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 92093 26 + 12760026 ACCAGTGGATTTACTTTAAAGACAAT i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 11849 26 - 27701 ACCAGCGGATTTACTTTAAAGACAAT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204368194 26 - 204787373 ACCAGTGGATTTACGTTAAAGACAAT i rheMac8.chr2 C 0 I 1 s macFas5.chr2 270012 26 - 192460366 ACCAGTGGATTTACTTTAAAGACAAT i macFas5.chr2 C 0 I 1 s macNem1.NW_012010856v1 288459 26 - 11645122 ACCAGTGGATTTACGTTAAAGACAAT i macNem1.NW_012010856v1 C 0 I 1 s cerAty1.NW_012001605v1 269897 26 - 6739814 ACCAGTGGATTTACTTTAAAGACAAT i cerAty1.NW_012001605v1 C 0 I 1 s chlSab2.chr22 160538 26 - 101219884 ACCAGTGGGTTTACTTTAAAGACAAT i chlSab2.chr22 C 0 I 1 s manLeu1.NW_012099043v1 280501 26 - 785044 ACCAGTGGATTTACTTTAAAGACAAT i manLeu1.NW_012099043v1 C 0 I 1 s colAng1.NW_012123820v1 180017 26 - 10971483 aCCAGTGGATTTACTTTAAAGACAAT i colAng1.NW_012123820v1 I 303 C 0 s calJac3.chr21 32808840 26 - 50472720 ACCAATGGATTTACTTTAACAACAAC i calJac3.chr21 C 0 I 1 s cebCap1.NW_016107322v1 7758013 26 + 14377064 ACCAGTGGATTTACTTTAACAACATT i cebCap1.NW_016107322v1 C 0 I 1 s aotNan1.NW_018487195v1 4219656 26 - 9889416 ACCAGTGAATTTTACTTAACAACAAT i aotNan1.NW_018487195v1 C 0 I 1 s otoGar3.GL873528 20843016 26 + 38779656 GCCCATATATTTTCTTTATGGACAAT i otoGar3.GL873528 C 0 I 1 s canFam3.chr31 28878586 25 - 39895921 -ATAGCGGATTTACTTTAAAGAGAAT i canFam3.chr31 C 0 I 1 e papAnu3.chr2 210038 345 + 187378091 I a score=13923.000000 s hg38.chr22_KI270732v1_random 41244 1 + 41543 A s panTro5.chr20 36388353 1 - 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931915 1 + 205426864 A i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 92119 1 + 12760026 A i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 11875 1 - 27701 A i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204368221 1 - 204787373 A i rheMac8.chr2 I 1 C 0 s macFas5.chr2 270039 1 - 192460366 A i macFas5.chr2 I 1 C 0 s macNem1.NW_012010856v1 288486 1 - 11645122 A i macNem1.NW_012010856v1 I 1 C 0 s cerAty1.NW_012001605v1 269924 1 - 6739814 A i cerAty1.NW_012001605v1 I 1 C 0 s papAnu3.chr2 210383 1 + 187378091 A i papAnu3.chr2 I 345 N 0 s chlSab2.chr22 160565 1 - 101219884 A i chlSab2.chr22 I 1 C 0 s manLeu1.NW_012099043v1 280528 1 - 785044 A i manLeu1.NW_012099043v1 I 1 C 0 s colAng1.NW_012123820v1 180043 1 - 10971483 A i colAng1.NW_012123820v1 C 0 I 1 s calJac3.chr21 32808867 1 - 50472720 A i calJac3.chr21 I 1 C 0 s cebCap1.NW_016107322v1 7758040 1 + 14377064 A i cebCap1.NW_016107322v1 I 1 C 0 s aotNan1.NW_018487195v1 4219683 1 - 9889416 A i aotNan1.NW_018487195v1 I 1 C 0 s otoGar3.GL873528 20843043 1 + 38779656 A i otoGar3.GL873528 I 1 C 0 s canFam3.chr31 28878612 1 - 39895921 A i canFam3.chr31 I 1 C 0 a score=333235.000000 s hg38.chr22_KI270732v1_random 41245 37 + 41543 TACTTTTGAATTACTTGTCTTCAA-A------ATTTAGTTTCTT s panTro5.chr20 36388354 37 - 66533130 TACTTTTGAATTACTTGTCTTCAA-A------ATTTAGTTTCTT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931916 37 + 205426864 TACTTTTGAATTCCTTGTCTTCAA-A------ATTTAGTTTCTT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 92120 37 + 12760026 TACTTTTGAATTACTTGTCTTCAA-A------ATTTTCTTTCTT i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 11876 37 - 27701 GACTTTTGAATTACTTGTCTTCAA-A------ATTTGGTTTCTT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204368222 37 - 204787373 CACTTTTGAATTACTTGTCTTCAA-A------ATTTGATTTCTT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 270040 37 - 192460366 CACTTTTGAATTACTTGTCTTCAA-A------ATTTGATTTCTT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288487 37 - 11645122 CACTTTTGAATTACTTGTCTTCAA-A------ATTTGATTTCTT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269925 37 - 6739814 CACTTTTGAATTACTTGTCTTCAA-A------ATTTGATTTCTT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160566 37 - 101219884 CACTTTTGAATGACTTGTCTTCAG-A------ATTTGATTTCTT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280529 37 - 785044 CACTTTTGAATTACTTGTCTTCAA-A------ATTTGATTTCTT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 180045 43 - 10971483 CACTTTTGAATTACTTGTCTTCAA-ATTTTTTTTTTGATGTCTT i colAng1.NW_012123820v1 I 1 C 0 s calJac3.chr21 32808868 37 - 50472720 CACTTTTGAATAATTTGTCTTTGA-A------ATTTGGTTTCCT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7758041 37 + 14377064 CAGTTTTGAATAACCTGTCTTCAA-A------ATTTGGTTTCCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219684 38 - 9889416 CACTTTTGAATAACTTGTCTTCAAGA------ATTTGGATTCCT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20843044 37 + 38779656 CGTTTTAAAAGAACTTTTCTTTAA-A------ATTTGGTTTCTT i otoGar3.GL873528 C 0 I 683 s canFam3.chr31 28878613 37 - 39895921 CATTTATTGAGATCTTGCCCTCAA-A------ATTTGAATTTTT i canFam3.chr31 C 0 C 0 a score=119823.000000 s hg38.chr22_KI270732v1_random 41282 13 + 41543 GAGAAAATTATCT s panTro5.chr20 36388391 13 - 66533130 GAGAAAATTATCT i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931953 13 + 205426864 GAGAAAATTATCT i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 92157 13 + 12760026 GAGAAAATTATCT i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 11913 13 - 27701 GAGAAAATTATCT i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204368259 13 - 204787373 GAGAAAATTATCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 270077 13 - 192460366 GAGAAAATTATCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288524 13 - 11645122 GAGAAAATTATCT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 269962 13 - 6739814 GAGAAAATTATCT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160603 13 - 101219884 GAGAAAATTATCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280566 13 - 785044 GAGAAAATTATCT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 180088 13 - 10971483 GAGAAAATTATCT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32808905 10 - 50472720 ---AAAATTATCT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7758078 10 + 14377064 ---AAAATTATCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219722 10 - 9889416 ---AAAATTATCT i aotNan1.NW_018487195v1 C 0 C 0 s canFam3.chr31 28878650 12 - 39895921 GAGAAAACTATC- i canFam3.chr31 C 0 C 0 e otoGar3.GL873528 20843081 683 + 38779656 I a score=764868.000000 s hg38.chr22_KI270732v1_random 41295 84 + 41543 GTGTAGATTAATCATGCATTTCAGATACTTTCCAGACATCTGAATGTTGTTTTCTTAAAAGTAGTCA--GCAAGCCTTTTTATGCA-- s panTro5.chr20 36388404 84 - 66533130 GTGTAGATTAATCATGCATTTCAGATACTTTCCAGACATCTGAGTGTTGTTTTCTTAAAAGTAGTCA--GCAAGCCTTTTTATGCA-- i panTro5.chr20 C 0 C 0 s panPan2.chr3 77931966 84 + 205426864 GTGTAGATTAATCATGCATTTCAGATACTTTCCAGACATCTGAATGTTGTTTTCTTAAAAGTAGTTA--GCAAGCCTTTTTATGCA-- i panPan2.chr3 C 0 C 0 s gorGor5.CYUI01015020v1 92170 84 + 12760026 GTGTAGATTAATCATGCATTTCAGATACTTTCCAGACATCTGAATGTTGTTTTCTTAAAAGTAGTCA--GCAAACCTTTTTGTGCA-- i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 11926 84 - 27701 GTGTAGATTAATCATGCATTTCAGATACTTTCCAGACATCTGAATGGTGTTTTCTTAAAAGTAGCCA--GCAAGGCTTTTTATGCA-- i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204368272 84 - 204787373 GTATCGATTAATCATGCATTTCAGATAATTTCCAGACATCTGAGTGTTGTTTTCTTAAAAGTAGTCA--GCAAGCCTTTTAATGCA-- i rheMac8.chr2 C 0 C 0 s macFas5.chr2 270090 84 - 192460366 GTATCGATTAATCATGCATTTCAGATAATTTCCAGACATCTGAGTGTTGTTTTCTTAAAAGTAGTCA--GCAAGCCTTTTAATGCA-- i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288537 84 - 11645122 GTATCGATTGATCACGCATTTCAGAGAATTTCCAGACATGTGAGTGTTGTTTTCTTAAAAGTAGTCA--GCAAGCCTTTTAATGCA-- i macNem1.NW_012010856v1 C 0 I 207 s cerAty1.NW_012001605v1 269975 84 - 6739814 GTGTCGATTAATCATGCATTTCAGATAATTTCCAGACATCTGAGTGTTGTTTTCTTAAAAGTAGTCC--GCAAGCCTTTTAATGCA-- i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160616 84 - 101219884 GTGTCGATTAATCATGCATTTCAGATAATTTCCAGACATCTGAATGTTGTTTTCTTAGAAGTAGTCA--GCAAGCCTTTTAATGCA-- i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280579 84 - 785044 GTGTCGATTTATCATGCATTTCAGATAATTTCCAGACATCTGAGTGTTGTTTTCTTAAAAGTAGTCC--GCAAGCCTTTTAATGCA-- i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 180101 84 - 10971483 GTGTCGATTAATCATGCATTTCAGATAATTTCCAGACATCTGAATGTTGTTTTCTTAAAAGTAGTCA--GCAAGCCTTTTAATGCA-- i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32808915 86 - 50472720 GTGTAGACTAATTATGCATTTCAGATACTTTCCAGACATCTGAATGTTGTTTTCTTAAAAGTGGTCAGTGCAAGACTTTTTTTATA-- i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7758088 86 + 14377064 GTGTGGACTAATTATGCATTTCAGATAATTTGCAGACATCCAAATTTTGCTTTCTTAAAAGTGGTCAGTGTAAGCCTTTTTATGCA-- i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219732 86 - 9889416 GTGTAGACTAATTATGCATTTCAGATACTTTCCAGACATCTGAATGTTGTTTTCTTAAAAGTGGTCAGTGCAAGCCTTTTTATGCA-- i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20843764 83 + 38779656 GTGTCCATTTGTCAGGCATGACAGAACCTTTGCTA--ATGTGAAGGTTGTATTTCCAAAAGT-GTCAGTGCAAGCCCTGTTATACA-- i otoGar3.GL873528 I 683 C 0 s canFam3.chr31 28878662 74 - 39895921 ------------CGGGCACTTCAAATTCTTTTCAGACATCTGAAGATTATATTCCTAAAAGAAATCA--GCACACATTCTTTTACACA i canFam3.chr31 C 0 C 0 a score=1247505.000000 s hg38.chr22_KI270732v1_random 41379 154 + 41543 GTCTGCATGGGAGAT-----AGTAAGAGATGTG-TATGCTGTGTATCTACTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---ATTATTTTTTCTGAAGAAGGGGATTTCTTTTTTATAA----------TTTAGATTAG-------ATGA-TTTTAAA----------------TGTTTTTATGTTTTAAC s panTro5.chr20 36388488 154 - 66533130 GTCTACATGGGAGAT-----AGTAAGAGATGTG-TATGCTGTATATCTACTAGTAGAGA-TTTGTTTTTGAGTGATCCCTT------AAAAA---ATTATTTTTTCTGAAGAAAGGGATTTCTTTTTTATAA----------TTTAGATTAG-------ATGA-TTTTAAA----------------TGTTTTTATGTTTTAAC i panTro5.chr20 C 0 C 0 s panPan2.chr3 77932050 154 + 205426864 GTCTGCATGGGAGAT-----AGTGAGAGATGTG-TATGCTGTATATCTACTAGCAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---ATTATTTTTTCTGAAGAAAGGGATTTCTTTTTTATAA----------TTTAGATTAG-------ATGA-TTTTAAA----------------TGTTTTTATGTTTTAAC i panPan2.chr3 C 0 N 0 s gorGor5.CYUI01015020v1 92254 155 + 12760026 GTCTGCATGGGAGAT-----AGTAAGAGATGTG-TATGCTGTATATCTGCTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---ATTATTTTTTCTGAAGAAGGGGATTTCTTTTTTATAA----------TTTAGATTAG-------ACAATTTTTAAA----------------TGTTTTTATGTTTTAAC i gorGor5.CYUI01015020v1 C 0 C 0 s nomLeu3.chrUn_GL398098_1 12010 154 - 27701 GTCTGCATGGGAGAT-----AGTAAGAGATGTG-TATGCTGCATATCTGCTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---ATTATTTTTTTTGAAGAAAGGGATTTCTTTTTTATAA----------TTTAGATTAG-------ATGA-TTTTAAA----------------TGTTTTTAGGTTTTAAC i nomLeu3.chrUn_GL398098_1 C 0 C 0 s rheMac8.chr2 204368356 154 - 204787373 GTCTGCATGGGAGAT-----AGCAAGAGACGTG-TGTATTGTATGTCTGCTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---AATATTTTTTCTGCAGAAAGTGATTTCTTTTTTATAG----------TTTAGATTAG-------ATGA-TTTTACA----------------TGTTTTTATGTTTTAAC i rheMac8.chr2 C 0 C 0 s macFas5.chr2 270174 153 - 192460366 GTCTGCATGGGAGAC-----AGCAAGAGACGTG-TGTGTTGTGTGTCTGCGAGTAGAGA-TTTG-TTTTGAGTGCTTCCTT------AAAAA---AATATTTTTTCTGCAGAAAGTGATTTCTTTTTTATAG----------TTTAGATTAG-------ATGA-TTTTACA----------------TGTTTTTATGTTTTAAC i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288828 154 - 11645122 GTCTGCATGGGAGAC-----AGCAAGAGACGTG-TGTGTTGTGTGTCTGCGAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---AATATTTTTTCTGCAGAAAGTGATTTCTTTTTTATAG----------TTTAGATTAG-------ATGA-TTTTACA----------------TGTTTTTATGTTTTAAC i macNem1.NW_012010856v1 I 207 C 0 s cerAty1.NW_012001605v1 270059 154 - 6739814 GTCTGCATGAGAGAT-----AGCAAGAGACGTG-TGTATTGTATGTCTGCTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---AATATTTTTTCTGCAGAAAGTGATTTCTTTTTTATAG----------TTTAGATTAG-------ATGA-TTTTACA----------------TGTTTTTATGTTTTAAC i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160700 153 - 101219884 GTCTGCATGGGAGAT-----AGCAACA-ACGTG-TATGCTGTATGTCTGCTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---AATATTTTTTCTGCAGAAAGTGATTTCTTTTTTATAG----------TTTAGATTAG-------ATGA-TTTTAAA----------------TGTTTTTATGTTTTAAC i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280663 153 - 785044 GTCTGCATGGGAGAT-----AGCAAGAGATGTG-TGTATTGTATGTCTGCTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---AAT-TTTTTTCTGCAGAAAGTGATTTCTTTTTTATAG----------TTTAGGTTAG-------ATGA-TTTTACA----------------TGTTTTTATGTTTTAAC i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 180185 154 - 10971483 GTCTGCATGGGAGAT-----AGCAAGAGACGTG-TATGCTGTATGTCTGCTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT------AAAAA---AATATTTTCTCTGCAGAAAGTGATTTCTTTTTTATAG----------TTTAGATTAG-------ATGA-TTTTAAA----------------TGTTTCTATGTTTTAAC i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32809001 153 - 50472720 GTCTGCTTGGGAGAT-----AGTAAAAGAGCTA-TATGCTGTATGTCTACTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTT-----AAAAAA---AGGTTTCTTTCTGCAGAAAG--atttattttttataa----------tttatattaG-------ATGA-CTTTAAA----------------TGCTTTTATGTTTTAAC i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7758174 154 + 14377064 GTCTGCTTGGGAGAT-----AGTAAGAGAGCTG-TATACTGTATGTCTACTAGTAGAGA-TTTGTTTTTGAGTGCTTCCTTAAAAAAAAAAA---AGTTTTTTTTCTGCAGAAAG------ATTTTTTATAA----------TTTATATTAG-------ATGA-CTTTAAA----------------TGCTTTTATGTTTTAAC i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219818 151 - 9889416 GTCTGC-TGGGAGA------AGTAAG-GAGCTG-TA-GCTGTATGTCTACTAGTAGAGATTTTGTTTTTGAGTGCTTCCTT----AAAAGAA---AGGTTTTTTTCTGCAGAAAG--ATATATTTCTTATAA----------TTTATATTAG-------ATGA-CTTTAAA----------------TGTTTTTATGTTTTAAC i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20843847 132 + 38779656 ATCTACAAGGGCAGT-----AGTAGGG-----------------------CAGTACAGA-GCTG-----------TGCTGT----------A---ATTAATTTTTCTACACAAAGGAATTTCTTT-TCATAACTTAGATGCTTTTAAATTAA-------ATCA-TTGTCTA----------ATATGTTATTTCTGTGCTTTAAA i otoGar3.GL873528 C 0 I 2 s canFam3.chr31 28878736 184 - 39895921 ATCTGCATGGAAGCCCATGAAGTAAGGGACGTGATATCGAAAATATCTAACTATAAAGA-CTTGCTTTGGAATACTCTCTT------AAAAACATATTTTTTTTTCCTCAGAAAG-GACTTCTTT-TCACAA----------CTTAGATTAGAGATTAAATGG-TTTGAAATGAAATTACTGCATTTTGTTCTAGTGTTTTAAG i canFam3.chr31 C 0 C 0 a score=41908.000000 s hg38.chr22_KI270732v1_random 41533 6 + 41543 CTCTCT s panTro5.chr20 36388642 6 - 66533130 CTCTAT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015020v1 92409 6 + 12760026 CTCTCT i gorGor5.CYUI01015020v1 C 0 N 0 s nomLeu3.chrUn_GL398098_1 12164 6 - 27701 CTCTCT i nomLeu3.chrUn_GL398098_1 C 0 N 0 s rheMac8.chr2 204368510 6 - 204787373 CTGTCT i rheMac8.chr2 C 0 C 0 s macFas5.chr2 270327 6 - 192460366 CTGTCT i macFas5.chr2 C 0 C 0 s macNem1.NW_012010856v1 288982 6 - 11645122 CTGTCT i macNem1.NW_012010856v1 C 0 C 0 s cerAty1.NW_012001605v1 270213 6 - 6739814 CTGTCT i cerAty1.NW_012001605v1 C 0 C 0 s chlSab2.chr22 160853 6 - 101219884 TTGTCT i chlSab2.chr22 C 0 C 0 s manLeu1.NW_012099043v1 280816 6 - 785044 CTGTCT i manLeu1.NW_012099043v1 C 0 C 0 s colAng1.NW_012123820v1 180339 6 - 10971483 CTGTCT i colAng1.NW_012123820v1 C 0 C 0 s calJac3.chr21 32809154 6 - 50472720 CGGTCT i calJac3.chr21 C 0 C 0 s cebCap1.NW_016107322v1 7758328 6 + 14377064 CTGTCT i cebCap1.NW_016107322v1 C 0 C 0 s aotNan1.NW_018487195v1 4219969 6 - 9889416 CTGTCT i aotNan1.NW_018487195v1 C 0 C 0 s otoGar3.GL873528 20843981 6 + 38779656 TCATCT i otoGar3.GL873528 I 2 C 0 s canFam3.chr31 28878920 6 - 39895921 CTACCT i canFam3.chr31 C 0 C 0 a score=32357.000000 s hg38.chr22_KI270732v1_random 41539 4 + 41543 TTCT s panTro5.chr20 36388648 4 - 66533130 TTCT i panTro5.chr20 C 0 N 0 s rheMac8.chr2 204368516 4 - 204787373 TTCT i rheMac8.chr2 C 0 N 0 s macFas5.chr2 270333 4 - 192460366 TTCT i macFas5.chr2 C 0 N 0 s macNem1.NW_012010856v1 288988 4 - 11645122 TTCT i macNem1.NW_012010856v1 C 0 N 0 s cerAty1.NW_012001605v1 270219 4 - 6739814 TTCT i cerAty1.NW_012001605v1 C 0 N 0 s chlSab2.chr22 160859 4 - 101219884 TTCT i chlSab2.chr22 C 0 N 0 s manLeu1.NW_012099043v1 280822 4 - 785044 TTCT i manLeu1.NW_012099043v1 C 0 N 0 s colAng1.NW_012123820v1 180345 4 - 10971483 TTCT i colAng1.NW_012123820v1 C 0 N 0 s calJac3.chr21 32809160 4 - 50472720 TTCT i calJac3.chr21 C 0 N 0 s cebCap1.NW_016107322v1 7758334 4 + 14377064 TTCT i cebCap1.NW_016107322v1 C 0 N 0 s aotNan1.NW_018487195v1 4219975 4 - 9889416 TTCT i aotNan1.NW_018487195v1 C 0 N 0 s otoGar3.GL873528 20843987 4 + 38779656 TTCT i otoGar3.GL873528 C 0 N 0 s canFam3.chr31 28878926 4 - 39895921 TCCT i canFam3.chr31 C 0 N 0